F339231

General Info

Members Datasets Scaffolds Average Seq Length
226 151 452 507

Family's Representative Sequence

Representative Sequence 3300048903|Ga0496100_0003999|Ga0496100_0003999_513_2096
Length 527
Sequence MASVEQAHTVEQKLPSENGGAPTNGAQSTGGIPVENPATGEIVATVPDLGADAVAEMAKRGRAAQPSWEAYGFDGRARVMLRAQKWVMDNAEQIIATIISETGKTFEDASLAEISYAGNAFGFWAKHAEQYLGDERVKSSQLLVKGKKLILRFRPLGLIGVIGPWNYPLTNSFGDCIPALMAGNSVILKPSEVTPLTSLLLAEGLRECGLPEDVLQIATGRGETGAALVEHVDMIMFTGSTRTGKKVAEGAAKRLIPMSLELGGKDPMIVLADADLERAANFATYYSMQNAGQTCISIERAYVEAPVYDQFVEKVSEKVRALRVGKPEGPGSVEIGAITFPPQLQTIEDHVTDAVDKGARVLAGGHSSHEGGGRFYEPTVLVDVDHTMKCMTEETFGPTLPIMKVEDADEAVRLANDSPYGLGSSVFTRDVQRGEQIARRLDAGAANVNDAMINYTVLELPMGGAKQSGLGSRHGAGGIRKYCSQQAIVVTPKLALKREPHMYPYKARNSKLLAGVFKFLYGRGKRD

Samples

Sample ID Description Type Environment
1 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
67 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
68 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
69 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
74 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
75 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
90 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
91 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
101 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
102 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
103 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 2643221617 Nocardioides sp. Root79 Isolate Unclassified
151 2643221620 Nocardioides sp. Root240 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.46
Metatranscriptomes 2.65
Isolates 0.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 12.83
Rhizosphere 83.63
Stem 0
Stem Tuber 0
Unclassified 0.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496100_0003999 3300048903 Bacteria 7751
2 JGI25407J50210_10001940 3300003373 Bacteria 4803
3 JGI25407J50210_10007092 3300003373 Bacteria 2805
4 Ga0070683_100010436 3300005329 Bacteria 7988
5 Ga0068869_100021346 3300005334 Bacteria 4454
6 Ga0068868_100085166 3300005338 Bacteria 2539
7 Ga0070660_100075716 3300005339 Bacteria 2635
8 Ga0070692_10002574 3300005345 Bacteria 7077
9 Ga0070669_100012669 3300005353 Bacteria 5986
10 Ga0070659_100000051 3300005366 Bacteria 97520
11 Ga0070659_100174866 3300005366 Bacteria 1760
12 Ga0070714_100000208 3300005435 Bacteria 47330
13 Ga0070714_100001061 3300005435 Bacteria 19635
14 Ga0070714_100030734 3300005435 Bacteria 4474
15 Ga0070714_100047374 3300005435 Bacteria 3651
16 Ga0070710_10000013 3300005437 Bacteria 117825
17 Ga0070711_100002817 3300005439 Bacteria 9985
18 Ga0070711_100024211 3300005439 Bacteria 3957
19 Ga0070705_100002323 3300005440 Bacteria 9596
20 Ga0070665_100004262 3300005548 Bacteria 15040
21 Ga0070664_100023924 3300005564 Bacteria 5048
22 Ga0070664_100186409 3300005564 Bacteria 1847
23 Ga0070702_100106239 3300005615 Bacteria 1731
24 Ga0068864_100087458 3300005618 Bacteria 2743
25 Ga0068864_100222570 3300005618 Bacteria 1742
26 Ga0081538_10000341 3300005981 Bacteria 53130
27 Ga0081538_10001028 3300005981 Bacteria 29786
28 Ga0081538_10001459 3300005981 Bacteria 24258
29 Ga0081538_10002626 3300005981 Bacteria 17367
30 Ga0081538_10003155 3300005981 Bacteria 15674
31 Ga0081538_10003417 3300005981 Bacteria 15022
32 Ga0081538_10004603 3300005981 Bacteria 12669
33 Ga0081538_10004850 3300005981 Bacteria 12248
34 Ga0081538_10013547 3300005981 Bacteria 6448
35 Ga0081538_10019984 3300005981 Bacteria 4951
36 Ga0081539_10003524 3300005985 Bacteria 19060
37 Ga0081539_10025393 3300005985 Bacteria 3817
38 Ga0070717_10000028 3300006028 Bacteria 144976
39 Ga0070717_10006702 3300006028 Bacteria 8495
40 Ga0070717_10131613 3300006028 Bacteria 2151
41 Ga0075432_10037430 3300006058 Bacteria 1689
42 Ga0070712_100000005 3300006175 Bacteria 177449
43 Ga0075433_10153194 3300006852 Bacteria 2050
44 Ga0105240_10007499 3300009093 Bacteria 15829
45 Ga0105245_10087762 3300009098 Bacteria 2856
46 Ga0114129_10200779 3300009147 Bacteria 2701
47 Ga0105241_10087278 3300009174 Bacteria 2455
48 Ga0105237_10000431 3300009545 Bacteria 59607
49 Ga0105239_10151431 3300010375 Bacteria 2588
50 Ga0105246_10083681 3300011119 Bacteria 2281
51 Ga0163162_10141365 3300013306 Bacteria 2521
52 Ga0157375_10105820 3300013308 Bacteria 2905
53 Ga0157375_10305642 3300013308 Bacteria 1754
54 Ga0157380_10087691 3300014326 Unclassified 2559
55 Ga0206356_10061981 3300020070 Bacteria 2939
56 Ga0206356_11315825 3300020070 Bacteria 4991
57 Ga0206349_1680275 3300020075 Bacteria 1711
58 Ga0206354_11258231 3300020081 Bacteria 2101
59 Ga0224712_10017304 3300022467 Bacteria 2388
60 Ga0224712_10052193 3300022467 Bacteria 1596
61 Ga0207692_10000003 3300025898 Bacteria 431531
62 Ga0207642_10027064 3300025899 Bacteria 2343
63 Ga0207688_10019012 3300025901 Bacteria 3738
64 Ga0207680_10053405 3300025903 Bacteria 2426
65 Ga0207695_10006100 3300025913 Bacteria 15724
66 Ga0207671_10001590 3300025914 Bacteria 25816
67 Ga0207693_10000023 3300025915 Bacteria 127876
68 Ga0207693_10031793 3300025915 Bacteria 4170
69 Ga0207663_10001857 3300025916 Bacteria 9988
70 Ga0207657_10045806 3300025919 Bacteria 3834
71 Ga0207649_10108530 3300025920 Bacteria 1850
72 Ga0207681_10003347 3300025923 Bacteria 10033
73 Ga0207664_10000174 3300025929 Bacteria 50477
74 Ga0207664_10000931 3300025929 Bacteria 19665
75 Ga0207664_10001725 3300025929 Bacteria 14403
76 Ga0207664_10023611 3300025929 Bacteria 4610
77 Ga0207664_10033126 3300025929 Bacteria 3967
78 Ga0207644_10048694 3300025931 Bacteria 3032
79 Ga0207690_10000054 3300025932 Bacteria 104097
80 Ga0207690_10034733 3300025932 Bacteria 3250
81 Ga0207706_10125032 3300025933 Bacteria 2262
82 Ga0207669_10034467 3300025937 Bacteria 2869
83 Ga0207704_10016326 3300025938 Bacteria 3813
84 Ga0207665_10037886 3300025939 Bacteria 3209
85 Ga0207661_10023241 3300025944 Bacteria 4683
86 Ga0207661_10149039 3300025944 Bacteria 2021
87 Ga0207679_10050580 3300025945 Bacteria 3038
88 Ga0207678_10107746 3300026067 Bacteria 2377
89 Ga0207708_10014174 3300026075 Bacteria 5960
90 Ga0207708_10049164 3300026075 Bacteria 3210
91 Ga0207702_10123092 3300026078 Bacteria 2324
92 Ga0207676_10091944 3300026095 Bacteria 2494
93 Ga0207674_10157441 3300026116 Bacteria 2227
94 Ga0207675_100045803 3300026118 Bacteria 4086
95 Ga0207675_100128864 3300026118 Bacteria 2398
96 Ga0268266_10015583 3300028379 Bacteria 6517
97 Ga0268264_10120933 3300028381 Bacteria 2307
98 Ga0265337_1001131 3300028556 Bacteria 13623
99 Ga0265326_10000005 3300028558 Bacteria 257124
100 Ga0265326_10000666 3300028558 Bacteria 12742
101 Ga0265319_1000065 3300028563 Bacteria 85273
102 Ga0265319_1000614 3300028563 Bacteria 23559
103 Ga0265334_10000001 3300028573 Bacteria 343037
104 Ga0265318_10000518 3300028577 Bacteria 27733
105 Ga0265336_10000001 3300028666 Bacteria 916179
106 Ga0265338_10000004 3300028800 Bacteria 644793
107 Ga0265338_10002112 3300028800 Bacteria 30624
108 Ga0265324_10005154 3300029957 Bacteria 5701
109 Ga0265340_10000002 3300031247 Bacteria 711693
110 Ga0265339_10009674 3300031249 Bacteria 6037
111 Ga0265327_10004804 3300031251 Bacteria 11731
112 Ga0265316_10008742 3300031344 Bacteria 9368
113 Ga0265316_10150193 3300031344 Bacteria 1745
114 Ga0307410_10021440 3300031852 Bacteria 3974
115 Ga0307406_10054840 3300031901 Bacteria 2545
116 Ga0307406_10124872 3300031901 Bacteria 1796
117 Ga0307409_100052648 3300031995 Bacteria 3123
118 Ga0307409_100100608 3300031995 Bacteria 2396
119 Ga0307411_10008354 3300032005 Bacteria 5356
120 Ga0307415_100008342 3300032126 Bacteria 5734
121 Ga0307415_100027541 3300032126 Bacteria 3602
122 Ga0373927_0047595 3300035695 Unclassified 2774
123 Ga0373937_0315991 3300036401 Bacteria 1478
124 Ga0395900_0210520 3300037418 Bacteria 1963
125 Ga0395898_0010038 3300037466 Bacteria 9914
126 Ga0436364_1046867 3300037853 Bacteria 1645
127 Ga0395901_0063455 3300038443 Bacteria 3845
128 Ga0395901_0076249 3300038443 Bacteria 3498
129 Ga0395901_0162225 3300038443 Bacteria 2347
130 Ga0436363_0467273 3300039450 Bacteria 3598
131 Ga0466969_0005364 3300044656 Bacteria 6825
132 Ga0466972_0061132 3300044658 Bacteria 1807
133 Ga0466966_0078857 3300044684 Bacteria 2053
134 Ga0466961_0038107 3300044693 Bacteria 3084
135 Ga0466963_0001450 3300044694 Bacteria 12787
136 Ga0466963_0018208 3300044694 Bacteria 4387
137 Ga0466963_0029285 3300044694 Bacteria 3543
138 Ga0466963_0062993 3300044694 Bacteria 2481
139 Ga0466971_0002470 3300044719 Bacteria 7809
140 Ga0466971_0005062 3300044719 Bacteria 5710
141 Ga0466968_0018887 3300044735 Bacteria 2769
142 Ga0466968_0033030 3300044735 Bacteria 2155
143 Ga0466957_0007392 3300044842 Bacteria 6208
144 Ga0466957_0094127 3300044842 Bacteria 1881
145 Ga0466960_0000003 3300044901 Bacteria 86010
146 Ga0466960_0002796 3300044901 Bacteria 6608
147 Ga0466959_0007753 3300045049 Bacteria 7550
148 Ga0466959_0022417 3300045049 Bacteria 4669
149 Ga0466959_0032949 3300045049 Bacteria 3834
150 Ga0466958_0001233 3300045836 Bacteria 11989
151 Ga0466958_0032424 3300045836 Bacteria 3108
152 Ga0466967_0015748 3300045976 Bacteria 5939
153 Ga0466967_0106899 3300045976 Bacteria 2566
154 Ga0466967_0192338 3300045976 Bacteria 1929
155 Ga0466967_0227867 3300045976 Bacteria 1773
156 Ga0466967_0303763 3300045976 Bacteria 1536
157 Ga0495653_0013483 3300046463 Bacteria 6660
158 Ga0495650_0000053 3300046471 Bacteria 316684
159 Ga0495664_0000073 3300046477 Bacteria 49243
160 Ga0495596_0023560 3300046500 Bacteria 2497
161 Ga0495608_0127201 3300046511 Bacteria 1632
162 Ga0495618_0000046 3300046514 Bacteria 93942
163 Ga0495630_0000241 3300046517 Bacteria 43800
164 Ga0495652_0014520 3300046529 Bacteria 7068
165 Ga0495645_0000022 3300046543 Bacteria 137019
166 Ga0495645_0007719 3300046543 Bacteria 7486
167 Ga0495588_0123657 3300046674 Bacteria 1364
168 Ga0495657_0000226 3300046675 Bacteria 50909
169 Ga0495604_0000148 3300047317 Bacteria 60608
170 Ga0495672_0056760 3300047320 Bacteria 2276
171 Ga0495684_0002822 3300047471 Bacteria 13698
172 Ga0496100_0000151 3300048903 Bacteria 38615
173 Ga0496101_0001252 3300048904 Bacteria 15196
174 Ga0496102_0000040 3300048905 Bacteria 196737
175 Ga0496103_0000294 3300048906 Bacteria 46122
176 Ga0496104_0000006 3300048907 Bacteria 536446
177 Ga0496105_0004665 3300048908 Bacteria 10331
178 Ga0496106_0030748 3300048909 Bacteria 4002
179 Ga0496107_0038515 3300048910 Bacteria 3429
180 Ga0496108_0041720 3300048911 Bacteria 3832
181 Ga0496109_0010016 3300048912 Bacteria 8093
182 Ga0496109_0017854 3300048912 Bacteria 6225
183 Ga0496109_0041620 3300048912 Bacteria 4161
184 Ga0496109_0145593 3300048912 Bacteria 2216
185 Ga0496110_0000044 3300048913 Bacteria 61218
186 Ga0496110_0066216 3300048913 Bacteria 3195
187 Ga0496110_0150073 3300048913 Bacteria 2110
188 Ga0496111_0000304 3300048914 Bacteria 24108
189 Ga0496111_0017321 3300048914 Bacteria 4981
190 Ga0496112_0000865 3300048915 Bacteria 21683
191 Ga0496112_0001472 3300048915 Bacteria 18075
192 Ga0496112_0005288 3300048915 Bacteria 11133
193 Ga0496113_0028297 3300048916 Bacteria 4029
194 Ga0496113_0038525 3300048916 Bacteria 3516
195 Ga0496113_0072895 3300048916 Bacteria 2615
196 Ga0496113_0081309 3300048916 Bacteria 2483
197 Ga0496113_0132463 3300048916 Bacteria 1957
198 Ga0496115_0000059 3300048918 Bacteria 102022
199 Ga0496115_0000087 3300048918 Bacteria 86513
200 Ga0496121_0003922 3300048924 Bacteria 20624
201 Ga0496121_0057607 3300048924 Bacteria 3219
202 Ga0496124_0028293 3300048927 Bacteria 5017
203 Ga0501031_0017576 3300049568 Bacteria 4648
204 Ga0501031_0084410 3300049568 Bacteria 2070
205 Ga0501032_0004532 3300049569 Bacteria 10453
206 Ga0501034_0008473 3300049571 Bacteria 10861
207 Ga0501039_0011186 3300049575 Bacteria 6837
208 Ga0501040_0226165 3300049576 Bacteria 1332
209 Ga0501043_0029043 3300049579 Bacteria 4342
210 Ga0501046_0066013 3300049580 Bacteria 2821
211 Ga0501071_0127318 3300049587 Bacteria 1891
212 Ga0501072_0008190 3300049588 Bacteria 7936
213 Ga0501079_0015076 3300049741 Bacteria 5893
214 Ga0501079_0100740 3300049741 Bacteria 2240
215 Ga0501080_0055801 3300049742 Bacteria 3679
216 Ga0501080_0070926 3300049742 Bacteria 3240
217 Ga0501035_0126460 3300049822 Bacteria 2231
218 nmdc:mga05p37_171676_c1 3300050507 Bacteria 2644
219 nmdc:mga09592_35242_c1 3300050508 Bacteria 4188
220 nmdc:mga08y16_113498_c1 3300050511 Bacteria 2820
221 Ga0495601_0001007 3300053077 Bacteria 15437
222 Ga0495601_0061240 3300053077 Bacteria 2389
223 Ga0500616_0050032 3300053153 Bacteria 2208
224 Ga0501082_0030883 3300060353 Bacteria 4618
225 2644101002 2643221617 Bacteria 5139111
226 2644117883 2643221620 Bacteria 5134593
227 Ga0496100_0003999
228 JGI25407J50210_10001940
229 JGI25407J50210_10007092
230 Ga0070683_100010436
231 Ga0068869_100021346
232 Ga0068868_100085166
233 Ga0070660_100075716
234 Ga0070692_10002574
235 Ga0070669_100012669
236 Ga0070659_100000051
237 Ga0070659_100174866
238 Ga0070714_100000208
239 Ga0070714_100001061
240 Ga0070714_100030734
241 Ga0070714_100047374
242 Ga0070710_10000013
243 Ga0070711_100002817
244 Ga0070711_100024211
245 Ga0070705_100002323
246 Ga0070665_100004262
247 Ga0070664_100023924
248 Ga0070664_100186409
249 Ga0070702_100106239
250 Ga0068864_100087458
251 Ga0068864_100222570
252 Ga0081538_10000341
253 Ga0081538_10001028
254 Ga0081538_10001459
255 Ga0081538_10002626
256 Ga0081538_10003155
257 Ga0081538_10003417
258 Ga0081538_10004603
259 Ga0081538_10004850
260 Ga0081538_10013547
261 Ga0081538_10019984
262 Ga0081539_10003524
263 Ga0081539_10025393
264 Ga0070717_10000028
265 Ga0070717_10006702
266 Ga0070717_10131613
267 Ga0075432_10037430
268 Ga0070712_100000005
269 Ga0075433_10153194
270 Ga0105240_10007499
271 Ga0105245_10087762
272 Ga0114129_10200779
273 Ga0105241_10087278
274 Ga0105237_10000431
275 Ga0105239_10151431
276 Ga0105246_10083681
277 Ga0163162_10141365
278 Ga0157375_10105820
279 Ga0157375_10305642
280 Ga0157380_10087691
281 Ga0206356_10061981
282 Ga0206356_11315825
283 Ga0206349_1680275
284 Ga0206354_11258231
285 Ga0224712_10017304
286 Ga0224712_10052193
287 Ga0207692_10000003
288 Ga0207642_10027064
289 Ga0207688_10019012
290 Ga0207680_10053405
291 Ga0207695_10006100
292 Ga0207671_10001590
293 Ga0207693_10000023
294 Ga0207693_10031793
295 Ga0207663_10001857
296 Ga0207657_10045806
297 Ga0207649_10108530
298 Ga0207681_10003347
299 Ga0207664_10000174
300 Ga0207664_10000931
301 Ga0207664_10001725
302 Ga0207664_10023611
303 Ga0207664_10033126
304 Ga0207644_10048694
305 Ga0207690_10000054
306 Ga0207690_10034733
307 Ga0207706_10125032
308 Ga0207669_10034467
309 Ga0207704_10016326
310 Ga0207665_10037886
311 Ga0207661_10023241
312 Ga0207661_10149039
313 Ga0207679_10050580
314 Ga0207678_10107746
315 Ga0207708_10014174
316 Ga0207708_10049164
317 Ga0207702_10123092
318 Ga0207676_10091944
319 Ga0207674_10157441
320 Ga0207675_100045803
321 Ga0207675_100128864
322 Ga0268266_10015583
323 Ga0268264_10120933
324 Ga0265337_1001131
325 Ga0265326_10000005
326 Ga0265326_10000666
327 Ga0265319_1000065
328 Ga0265319_1000614
329 Ga0265334_10000001
330 Ga0265318_10000518
331 Ga0265336_10000001
332 Ga0265338_10000004
333 Ga0265338_10002112
334 Ga0265324_10005154
335 Ga0265340_10000002
336 Ga0265339_10009674
337 Ga0265327_10004804
338 Ga0265316_10008742
339 Ga0265316_10150193
340 Ga0307410_10021440
341 Ga0307406_10054840
342 Ga0307406_10124872
343 Ga0307409_100052648
344 Ga0307409_100100608
345 Ga0307411_10008354
346 Ga0307415_100008342
347 Ga0307415_100027541
348 Ga0373927_0047595
349 Ga0373937_0315991
350 Ga0395900_0210520
351 Ga0395898_0010038
352 Ga0436364_1046867
353 Ga0395901_0063455
354 Ga0395901_0076249
355 Ga0395901_0162225
356 Ga0436363_0467273
357 Ga0466969_0005364
358 Ga0466972_0061132
359 Ga0466966_0078857
360 Ga0466961_0038107
361 Ga0466963_0001450
362 Ga0466963_0018208
363 Ga0466963_0029285
364 Ga0466963_0062993
365 Ga0466971_0002470
366 Ga0466971_0005062
367 Ga0466968_0018887
368 Ga0466968_0033030
369 Ga0466957_0007392
370 Ga0466957_0094127
371 Ga0466960_0000003
372 Ga0466960_0002796
373 Ga0466959_0007753
374 Ga0466959_0022417
375 Ga0466959_0032949
376 Ga0466958_0001233
377 Ga0466958_0032424
378 Ga0466967_0015748
379 Ga0466967_0106899
380 Ga0466967_0192338
381 Ga0466967_0227867
382 Ga0466967_0303763
383 Ga0495653_0013483
384 Ga0495650_0000053
385 Ga0495664_0000073
386 Ga0495596_0023560
387 Ga0495608_0127201
388 Ga0495618_0000046
389 Ga0495630_0000241
390 Ga0495652_0014520
391 Ga0495645_0000022
392 Ga0495645_0007719
393 Ga0495588_0123657
394 Ga0495657_0000226
395 Ga0495604_0000148
396 Ga0495672_0056760
397 Ga0495684_0002822
398 Ga0496100_0000151
399 Ga0496101_0001252
400 Ga0496102_0000040
401 Ga0496103_0000294
402 Ga0496104_0000006
403 Ga0496105_0004665
404 Ga0496106_0030748
405 Ga0496107_0038515
406 Ga0496108_0041720
407 Ga0496109_0010016
408 Ga0496109_0017854
409 Ga0496109_0041620
410 Ga0496109_0145593
411 Ga0496110_0000044
412 Ga0496110_0066216
413 Ga0496110_0150073
414 Ga0496111_0000304
415 Ga0496111_0017321
416 Ga0496112_0000865
417 Ga0496112_0001472
418 Ga0496112_0005288
419 Ga0496113_0028297
420 Ga0496113_0038525
421 Ga0496113_0072895
422 Ga0496113_0081309
423 Ga0496113_0132463
424 Ga0496115_0000059
425 Ga0496115_0000087
426 Ga0496121_0003922
427 Ga0496121_0057607
428 Ga0496124_0028293
429 Ga0501031_0017576
430 Ga0501031_0084410
431 Ga0501032_0004532
432 Ga0501034_0008473
433 Ga0501039_0011186
434 Ga0501040_0226165
435 Ga0501043_0029043
436 Ga0501046_0066013
437 Ga0501071_0127318
438 Ga0501072_0008190
439 Ga0501079_0015076
440 Ga0501079_0100740
441 Ga0501080_0055801
442 Ga0501080_0070926
443 Ga0501035_0126460
444 nmdc:mga05p37_171676_c1
445 nmdc:mga09592_35242_c1
446 nmdc:mga08y16_113498_c1
447 Ga0495601_0001007
448 Ga0495601_0061240
449 Ga0500616_0050032
450 Ga0501082_0030883
451 2644101002
452 2644117883

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

23

488

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4o5h-assembly1.cif.gz_A x-ray crystal structure of a putative phenylacetaldehyde dehydrogenase from burkholderia cenocepacia 0.9354 7 440
4ou2-assembly1.cif.gz_C a 2.15 angstroms x-ray crystal structure of e268a 2-aminomuconate 6-semialdehyde dehydrogenase catalytic intermediate from pseudomonas fluorescens 0.9306 4 438
7bzv-assembly1.cif.gz_B crystal structure of 2-aminomuconic 6-semialdehyde dehydrogenase from pseudomonas species ap-3 0.93 5 437
5klm-assembly1.cif.gz_A crystal structure of 2-hydroxymuconate-6-semialdehyde derived intermediate in nad(+)-bound 2-aminomuconate 6-semialdehyde dehydrogenase n169d 0.9295 4 437
5kln-assembly1.cif.gz_B crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase n169a in complex with nad+ 0.9287 4 437
ID Description Score Start End Superfamily
af_P76149_240_424_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9794 215 398 3.40.309.10
af_A4IDE7_286_468_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9741 215 397 3.40.309.10
af_P40047_292_478_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9709 213 399 3.40.309.10
af_P77674_250_439_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9702 213 400 3.40.309.10
af_A4IDE7_286_468_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9689 215 397 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A6J7RVJ3-F1-model_v4 Unannotated protein 0.9707 228 431 GO:0016620
AF-A0A6I9P752-F1-model_v4 Aldehyde dehydrogenase, mitochondrial-like 0.9705 209 431 GO:0005759
GO:0016620
AF-A0A3M2SKS3-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9625 211 396 GO:0016620
AF-A0A833KN20-F1-model_v4 deleted 0.9616 231 388
AF-A0A7S3RPQ1-F1-model_v4 aldehyde dehydrogenase (NAD(+)) (EC 1.2.1.3) 0.9606 214 398 GO:0016620

Map