F339332

General Info

Members Datasets Scaffolds Average Seq Length
226 181 452 702

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_133339_c1|nmdc:mga05p37_133339_c1_590_2863
Length 757
Sequence MKQLLQNMANGETKVADVPSPRPGAGQLLIHTSATLVSAGTERMLIEFGKANWLDKARQQPDKVRMVLEKARTDGLVATFEAVQNKLGQPLALGYCNVGVVAEIGAGVEGFAIGDRVVSNGKHAQVVCVPKNLCARVPEKVTDQQAVFTVLAAIGLQGIRLVNPTLGETVVVTGLGLIGLLTAQLLRAQGCRVLGIDLDPARLAMARNFGAEVVDLSRGEDPLAVAAAFSRGRGVDAVLITASTKSNQPVSQAAKMCRQRGRIVLVGVTGLELSRADFYEKELSFQVSCSYGPGRYDPAYEEGGQDYPVGFVRWTEQRNFEAVLDLLASERLDVRPLISHRFPLERAAEAYALLTSNVPSLGILLEYPGTAAQPAGTLAARTVLLPRAVDVHPATPSVCFLGAGNYASRVLMPAFKAAGTLLHTVVSGGGVSAVHHGSKQGFVQASTDAAAAIADPAVDTVVVATRHDSHARYVLQALRAGKHVFCEKPLCLTSEELREIEVEARSRPAQTLMVGFNRRFAPQVVRIKQLLSGVADPKSFVMTVNAGAIPPDHWTQDPAVGGGRIIGEACHFVDLLQFLAGAPIVSVQAVALGLRHTSFMGDDKVTFTLSFADGSVGTVHYLANGHRSFAKERLEVFCAGRILQLDNFRRLRGFGWPGFKKMNLWQQDKGNQACAAAFVDAIRQGKPAPIPFQELIATTLTTLAVVEALKNGAPVITDWESVMRPVELKAGCEAKGSSKGRESEAANQRDQVDERAK

Samples

Sample ID Description Type Environment
1 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
52 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
56 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
58 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
59 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
61 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
86 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
87 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
90 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
97 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
98 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
101 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
102 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
103 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
104 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
115 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
116 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
117 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
118 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
119 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
126 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
127 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
128 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
145 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
156 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
157 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
158 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
160 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
161 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
162 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
163 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
164 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
165 2738541284 Pedobacter sp. YR016 Isolate Unclassified
166 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
167 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
168 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
169 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
170 2842826826 Pseudomonas sp. R-72172 Isolate Unclassified
171 2842837860 Pseudomonas sp. R-72102 Isolate Unclassified
172 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
173 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
174 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
175 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
176 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
177 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
178 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
179 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
180 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
181 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.27
Metatranscriptomes 0
Isolates 9.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.5
Nodule 0
Rhizoplane 1.77
Rhizosphere 72.12
Stem 0
Stem Tuber 0
Unclassified 3.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga05p37_133339_c1 3300050507 Bacteria 3047
2 JGI24740J21852_10003456 3300001979 Bacteria 6937
3 JGI25162J39368_1000204 3300002737 Bacteria 62620
4 JGI25154J39366_1000072 3300002738 Bacteria 93790
5 JGI25164J39214_1000941 3300002772 Bacteria 9450
6 JGI25406J46586_10001927 3300003203 Bacteria 9786
7 JGI25165J46597_1000753 3300003214 Bacteria 24891
8 rootL2_10015068 3300003322 Bacteria 4644
9 rootH1_10022598 3300003323 Bacteria 19570
10 rootH1_10065870 3300003323 Bacteria 6605
11 Ga0055535_1002225 3300003761 Bacteria 7291
12 Ga0055524_1000121 3300003775 Bacteria 91150
13 Ga0055536_1000186 3300003781 Bacteria 50837
14 Ga0055530_10000755 3300003791 Bacteria 26925
15 Ga0055540_1000205 3300003792 Bacteria 57359
16 Ga0055531_10000155 3300003794 Bacteria 79002
17 Ga0065714_10002629 3300005288 Bacteria 15613
18 Ga0065714_10002854 3300005288 Bacteria 10156
19 Ga0065714_10068075 3300005288 Bacteria 4988
20 Ga0065704_10070385 3300005289 Bacteria 27825
21 Ga0065704_10071285 3300005289 Bacteria 12005
22 Ga0065707_10082906 3300005295 Bacteria 11477
23 Ga0068869_100031419 3300005334 Bacteria 3735
24 Ga0070660_100043902 3300005339 Bacteria 3417
25 Ga0070660_100052511 3300005339 Bacteria 3143
26 Ga0070667_100000046 3300005367 Bacteria 162942
27 Ga0070667_100000213 3300005367 Bacteria 67548
28 Ga0070713_100021401 3300005436 Unclassified 4973
29 Ga0070700_100003637 3300005441 Bacteria 7977
30 Ga0070707_100091152 3300005468 Bacteria 2950
31 Ga0070679_100013219 3300005530 Bacteria 7901
32 Ga0070697_100015055 3300005536 Bacteria 6071
33 Ga0068853_100094093 3300005539 Bacteria 2639
34 Ga0070665_100001202 3300005548 Bacteria 31585
35 Ga0068855_100040058 3300005563 Bacteria 5561
36 Ga0068856_100057432 3300005614 Bacteria 3842
37 Ga0068859_100014340 3300005617 Bacteria 7949
38 Ga0068861_100005415 3300005719 Bacteria 8639
39 Ga0081539_10001561 3300005985 Bacteria 38000
40 Ga0081539_10005676 3300005985 Bacteria 12524
41 Ga0075428_100017919 3300006844 Bacteria 7826
42 Ga0075431_100007144 3300006847 Bacteria 11098
43 Ga0075433_10060161 3300006852 Unclassified 3326
44 Ga0097620_100014340 3300006931 Bacteria 7949
45 Ga0105244_10001602 3300009036 Bacteria 17982
46 Ga0105240_10000047 3300009093 Bacteria 239067
47 Ga0111539_10029273 3300009094 Bacteria 6711
48 Ga0105247_10012162 3300009101 Bacteria 5173
49 Ga0105248_10005956 3300009177 Bacteria 13397
50 Ga0105239_10000415 3300010375 Bacteria 62156
51 Ga0105239_10001231 3300010375 Bacteria 34884
52 Ga0157373_10000656 3300013100 Bacteria 27193
53 Ga0157373_10000710 3300013100 Bacteria 26081
54 Ga0157371_10000521 3300013102 Bacteria 45906
55 Ga0157371_10001200 3300013102 Bacteria 27764
56 Ga0157371_10052013 3300013102 Unclassified 2910
57 Ga0157370_10004188 3300013104 Bacteria 16690
58 Ga0157370_10004441 3300013104 Bacteria 16072
59 Ga0157369_10000477 3300013105 Bacteria 53128
60 Ga0157374_10001841 3300013296 Bacteria 17854
61 Ga0157372_10004232 3300013307 Bacteria 15348
62 Ga0157372_10043199 3300013307 Bacteria 4989
63 Ga0157379_10114783 3300014968 Bacteria 2421
64 Ga0182006_1000571 3300015261 Bacteria 27267
65 Ga0182007_10000345 3300015262 Bacteria 29565
66 Ga0213876_10010540 3300021384 Bacteria 4954
67 Ga0207427_100223 3300025231 Bacteria 48426
68 Ga0209437_100164 3300025233 Bacteria 145317
69 Ga0209258_100228 3300025242 Bacteria 105712
70 Ga0209646_1000037 3300025246 Bacteria 355116
71 Ga0209026_1000656 3300025250 Bacteria 21145
72 Ga0209148_1000204 3300025254 Bacteria 105778
73 Ga0209233_1000242 3300025261 Bacteria 90301
74 Ga0209676_1000010 3300025292 Bacteria 954025
75 Ga0209564_1000008 3300025295 Bacteria 953227
76 Ga0209758_1003202 3300025297 Bacteria 15276
77 Ga0209050_1000081 3300025298 Bacteria 267533
78 Ga0209256_1000015 3300025299 Bacteria 622953
79 Ga0207426_1000193 3300025302 Bacteria 151669
80 Ga0209051_1000104 3300025303 Bacteria 161001
81 Ga0209257_1000040 3300025304 Bacteria 538759
82 Ga0207655_1001303 3300025728 Bacteria 23615
83 Ga0207707_10087657 3300025912 Unclassified 2719
84 Ga0207695_10000010 3300025913 Bacteria 981919
85 Ga0207657_10012431 3300025919 Bacteria 8409
86 Ga0207652_10000289 3300025921 Bacteria 52119
87 Ga0207646_10082082 3300025922 Bacteria 2882
88 Ga0207658_10000058 3300025986 Bacteria 122331
89 Ga0207658_10000078 3300025986 Bacteria 108156
90 Ga0207708_10006958 3300026075 Bacteria 8366
91 Ga0207698_10001493 3300026142 Bacteria 13616
92 Ga0268266_10042755 3300028379 Bacteria 3871
93 Ga0265338_10049977 3300028800 Bacteria 3784
94 Ga0265339_10001025 3300031249 Bacteria 21308
95 Ga0265327_10000272 3300031251 Bacteria 102100
96 Ga0265327_10002675 3300031251 Bacteria 18297
97 Ga0265316_10000257 3300031344 Bacteria 60743
98 Ga0307408_100023104 3300031548 Bacteria 4233
99 Ga0265314_10038417 3300031711 Bacteria 3458
100 Ga0316577_10001979 3300031733 Bacteria 9969
101 Ga0307412_10000444 3300031911 Bacteria 25059
102 Ga0307412_10001869 3300031911 Bacteria 11647
103 Ga0307414_10000128 3300032004 Bacteria 53071
104 Ga0307415_100021391 3300032126 Bacteria 3975
105 Ga0316582_0015153 3300036647 Bacteria 4398
106 Ga0316584_0020485 3300036712 Bacteria 4794
107 Ga0395899_0000002 3300037312 Bacteria 1324310
108 Ga0395899_0000893 3300037312 Bacteria 28205
109 Ga0395899_0044578 3300037312 Bacteria 3305
110 Ga0395900_0000704 3300037418 Bacteria 44558
111 Ga0395900_0001579 3300037418 Bacteria 26953
112 Ga0395898_0000988 3300037466 Bacteria 44716
113 Ga0436364_0728403 3300037853 Bacteria 5264
114 Ga0395901_0017832 3300038443 Bacteria 7246
115 Ga0400485_05083 3300038735 Bacteria 20902
116 Ga0400486_31476 3300038742 Bacteria 13318
117 Ga0400489_20428 3300039093 Bacteria 5261
118 Ga0436365_0148450 3300039437 Bacteria 9119
119 Ga0436365_1051444 3300039437 Bacteria 2156
120 Ga0439447_001436 3300041407 Bacteria 8745
121 Ga0439466_0000350 3300041411 Bacteria 17723
122 Ga0451837_0720440 3300041494 Bacteria 2866
123 Ga0439431_0001489 3300041997 Bacteria 5174
124 Ga0439445_0001927 3300042004 Bacteria 4579
125 Ga0451577_0025468 3300042876 Bacteria 5366
126 Ga0451577_0080752 3300042876 Bacteria 2900
127 Ga0451577_0086564 3300042876 Unclassified 2795
128 Ga0453683_0000194 3300044673 Bacteria 83328
129 Ga0453683_0000331 3300044673 Bacteria 58273
130 Ga0453683_0000687 3300044673 Bacteria 35773
131 Ga0466966_0001997 3300044684 Bacteria 13223
132 Ga0466961_0007555 3300044693 Bacteria 6919
133 Ga0466961_0018251 3300044693 Unclassified 4510
134 Ga0466964_0015794 3300044706 Unclassified 2874
135 Ga0453684_0000023 3300044712 Bacteria 857153
136 Ga0453684_0000808 3300044712 Bacteria 106678
137 Ga0453684_0002012 3300044712 Bacteria 52025
138 Ga0453684_0002032 3300044712 Bacteria 51686
139 Ga0453684_0009229 3300044712 Bacteria 17325
140 Ga0453684_0020199 3300044712 Bacteria 10070
141 Ga0453684_0027856 3300044712 Bacteria 8085
142 Ga0453684_0078848 3300044712 Unclassified 4119
143 Ga0453684_0168304 3300044712 Bacteria 2585
144 Ga0466957_0005019 3300044842 Bacteria 7410
145 Ga0451576_0000135 3300045051 Bacteria 186763
146 Ga0451576_0001003 3300045051 Bacteria 52190
147 Ga0451576_0002625 3300045051 Bacteria 26310
148 Ga0451576_0043866 3300045051 Bacteria 4717
149 Ga0466958_0012597 3300045836 Bacteria 4792
150 Ga0495591_000495 3300046458 Bacteria 31227
151 Ga0495607_0000992 3300046501 Bacteria 26214
152 Ga0495606_0000675 3300046507 Bacteria 53375
153 Ga0495610_0001743 3300046512 Bacteria 19056
154 Ga0495620_0000400 3300046515 Bacteria 29106
155 Ga0495632_0005302 3300046519 Bacteria 8561
156 Ga0495643_0005579 3300046522 Bacteria 8468
157 Ga0495643_0016484 3300046522 Bacteria 4340
158 Ga0495663_0000147 3300046525 Bacteria 28880
159 Ga0495663_0000415 3300046525 Bacteria 15549
160 Ga0495652_0031840 3300046529 Bacteria 4616
161 Ga0495597_0000534 3300046542 Bacteria 31450
162 Ga0495668_0001448 3300046616 Bacteria 22927
163 Ga0495668_0004815 3300046616 Bacteria 9393
164 Ga0495611_0000307 3300046648 Bacteria 33107
165 Ga0495661_0000746 3300046665 Bacteria 31587
166 Ga0495599_0001322 3300046678 Bacteria 14133
167 Ga0495636_0000006 3300047318 Bacteria 107323
168 Ga0495672_0011430 3300047320 Bacteria 6267
169 Ga0496104_0071562 3300048907 Bacteria 3297
170 Ga0496114_0002845 3300048917 Bacteria 13265
171 Ga0496115_0073954 3300048918 Bacteria 2766
172 Ga0496116_0001869 3300048919 Bacteria 22748
173 Ga0496121_0001804 3300048924 Bacteria 34592
174 Ga0496122_0000854 3300048925 Bacteria 57341
175 Ga0496123_0001214 3300048926 Bacteria 37603
176 Ga0496125_0040027 3300048928 Bacteria 4026
177 Ga0496125_0094891 3300048928 Unclassified 2221
178 Ga0501031_0087619 3300049568 Bacteria 2030
179 Ga0501032_0060482 3300049569 Bacteria 2540
180 Ga0501033_0000710 3300049570 Bacteria 30639
181 Ga0501037_0000047 3300049573 Bacteria 114757
182 Ga0501043_0001091 3300049579 Bacteria 23816
183 Ga0501047_0009932 3300049581 Bacteria 9000
184 Ga0501067_0005899 3300049583 Bacteria 6788
185 Ga0501067_0054467 3300049583 Bacteria 2216
186 Ga0501069_0000142 3300049585 Bacteria 31817
187 Ga0501070_0001302 3300049586 Bacteria 22400
188 Ga0501071_0064114 3300049587 Bacteria 2665
189 Ga0501074_0000238 3300049590 Bacteria 30793
190 Ga0501079_0069979 3300049741 Bacteria 2709
191 Ga0501080_0056312 3300049742 Bacteria 3662
192 Ga0501080_0071900 3300049742 Bacteria 3218
193 Ga0501083_0000312 3300049744 Bacteria 30793
194 Ga0501035_0000025 3300049822 Bacteria 204195
195 Ga0501035_0098083 3300049822 Bacteria 2573
196 Ga0501044_0000347 3300049823 Bacteria 58132
197 Ga0501044_0123334 3300049823 Bacteria 2590
198 Ga0501044_0134181 3300049823 Bacteria 2468
199 nmdc:mga06r32_6537_c1 3300050510 Bacteria 10473
200 Ga0500635_0005478 3300053080 Bacteria 3332
201 Ga0500643_003612 3300053087 Bacteria 7344
202 Ga0500658_0000276 3300053134 Bacteria 23447
203 Ga0500622_0000123 3300053156 Bacteria 81320
204 Ga0466962_0001165 3300061719 Bacteria 12104
205 2511823640 2511231156 Bacteria 6845832
206 2597859392 2597489887 Bacteria 6666321
207 2599482222 2599185185 Bacteria 6652270
208 2644040051 2643221605 Bacteria 4772303
209 2644126157 2643221622 Bacteria 4212502
210 2738763218 2738541284 Bacteria 5199923
211 2743738924 2740892503 Bacteria 6855563
212 2774391105 2773857761 Bacteria 3837365
213 2776616235 2775506987 Bacteria 5373360
214 2819679867 2818991460 Bacteria 7595395
215 2842831694 2842826826 Bacteria 5974129
216 2842842251 2842837860 Bacteria 6066181
217 2885084612 2885080285 Bacteria 6355622
218 2919190996 2919186247 Bacteria 6244071
219 2923158000 2923153595 Bacteria 6870622
220 2929207565 2929206907 Bacteria 5918291
221 2929926004 2929921140 Bacteria 8649150
222 2939669276 2939664404 Bacteria 6364494
223 2945962202 2945961074 Bacteria 7342064
224 3007397307 3007395558 Bacteria 6755444
225 8003153040 8003151029 Bacteria 8187759
226 8055595121 8055592153 Bacteria 5961247
227 nmdc:mga05p37_133339_c1
228 JGI24740J21852_10003456
229 JGI25162J39368_1000204
230 JGI25154J39366_1000072
231 JGI25164J39214_1000941
232 JGI25406J46586_10001927
233 JGI25165J46597_1000753
234 rootL2_10015068
235 rootH1_10022598
236 rootH1_10065870
237 Ga0055535_1002225
238 Ga0055524_1000121
239 Ga0055536_1000186
240 Ga0055530_10000755
241 Ga0055540_1000205
242 Ga0055531_10000155
243 Ga0065714_10002629
244 Ga0065714_10002854
245 Ga0065714_10068075
246 Ga0065704_10070385
247 Ga0065704_10071285
248 Ga0065707_10082906
249 Ga0068869_100031419
250 Ga0070660_100043902
251 Ga0070660_100052511
252 Ga0070667_100000046
253 Ga0070667_100000213
254 Ga0070713_100021401
255 Ga0070700_100003637
256 Ga0070707_100091152
257 Ga0070679_100013219
258 Ga0070697_100015055
259 Ga0068853_100094093
260 Ga0070665_100001202
261 Ga0068855_100040058
262 Ga0068856_100057432
263 Ga0068859_100014340
264 Ga0068861_100005415
265 Ga0081539_10001561
266 Ga0081539_10005676
267 Ga0075428_100017919
268 Ga0075431_100007144
269 Ga0075433_10060161
270 Ga0097620_100014340
271 Ga0105244_10001602
272 Ga0105240_10000047
273 Ga0111539_10029273
274 Ga0105247_10012162
275 Ga0105248_10005956
276 Ga0105239_10000415
277 Ga0105239_10001231
278 Ga0157373_10000656
279 Ga0157373_10000710
280 Ga0157371_10000521
281 Ga0157371_10001200
282 Ga0157371_10052013
283 Ga0157370_10004188
284 Ga0157370_10004441
285 Ga0157369_10000477
286 Ga0157374_10001841
287 Ga0157372_10004232
288 Ga0157372_10043199
289 Ga0157379_10114783
290 Ga0182006_1000571
291 Ga0182007_10000345
292 Ga0213876_10010540
293 Ga0207427_100223
294 Ga0209437_100164
295 Ga0209258_100228
296 Ga0209646_1000037
297 Ga0209026_1000656
298 Ga0209148_1000204
299 Ga0209233_1000242
300 Ga0209676_1000010
301 Ga0209564_1000008
302 Ga0209758_1003202
303 Ga0209050_1000081
304 Ga0209256_1000015
305 Ga0207426_1000193
306 Ga0209051_1000104
307 Ga0209257_1000040
308 Ga0207655_1001303
309 Ga0207707_10087657
310 Ga0207695_10000010
311 Ga0207657_10012431
312 Ga0207652_10000289
313 Ga0207646_10082082
314 Ga0207658_10000058
315 Ga0207658_10000078
316 Ga0207708_10006958
317 Ga0207698_10001493
318 Ga0268266_10042755
319 Ga0265338_10049977
320 Ga0265339_10001025
321 Ga0265327_10000272
322 Ga0265327_10002675
323 Ga0265316_10000257
324 Ga0307408_100023104
325 Ga0265314_10038417
326 Ga0316577_10001979
327 Ga0307412_10000444
328 Ga0307412_10001869
329 Ga0307414_10000128
330 Ga0307415_100021391
331 Ga0316582_0015153
332 Ga0316584_0020485
333 Ga0395899_0000002
334 Ga0395899_0000893
335 Ga0395899_0044578
336 Ga0395900_0000704
337 Ga0395900_0001579
338 Ga0395898_0000988
339 Ga0436364_0728403
340 Ga0395901_0017832
341 Ga0400485_05083
342 Ga0400486_31476
343 Ga0400489_20428
344 Ga0436365_0148450
345 Ga0436365_1051444
346 Ga0439447_001436
347 Ga0439466_0000350
348 Ga0451837_0720440
349 Ga0439431_0001489
350 Ga0439445_0001927
351 Ga0451577_0025468
352 Ga0451577_0080752
353 Ga0451577_0086564
354 Ga0453683_0000194
355 Ga0453683_0000331
356 Ga0453683_0000687
357 Ga0466966_0001997
358 Ga0466961_0007555
359 Ga0466961_0018251
360 Ga0466964_0015794
361 Ga0453684_0000023
362 Ga0453684_0000808
363 Ga0453684_0002012
364 Ga0453684_0002032
365 Ga0453684_0009229
366 Ga0453684_0020199
367 Ga0453684_0027856
368 Ga0453684_0078848
369 Ga0453684_0168304
370 Ga0466957_0005019
371 Ga0451576_0000135
372 Ga0451576_0001003
373 Ga0451576_0002625
374 Ga0451576_0043866
375 Ga0466958_0012597
376 Ga0495591_000495
377 Ga0495607_0000992
378 Ga0495606_0000675
379 Ga0495610_0001743
380 Ga0495620_0000400
381 Ga0495632_0005302
382 Ga0495643_0005579
383 Ga0495643_0016484
384 Ga0495663_0000147
385 Ga0495663_0000415
386 Ga0495652_0031840
387 Ga0495597_0000534
388 Ga0495668_0001448
389 Ga0495668_0004815
390 Ga0495611_0000307
391 Ga0495661_0000746
392 Ga0495599_0001322
393 Ga0495636_0000006
394 Ga0495672_0011430
395 Ga0496104_0071562
396 Ga0496114_0002845
397 Ga0496115_0073954
398 Ga0496116_0001869
399 Ga0496121_0001804
400 Ga0496122_0000854
401 Ga0496123_0001214
402 Ga0496125_0040027
403 Ga0496125_0094891
404 Ga0501031_0087619
405 Ga0501032_0060482
406 Ga0501033_0000710
407 Ga0501037_0000047
408 Ga0501043_0001091
409 Ga0501047_0009932
410 Ga0501067_0005899
411 Ga0501067_0054467
412 Ga0501069_0000142
413 Ga0501070_0001302
414 Ga0501071_0064114
415 Ga0501074_0000238
416 Ga0501079_0069979
417 Ga0501080_0056312
418 Ga0501080_0071900
419 Ga0501083_0000312
420 Ga0501035_0000025
421 Ga0501035_0098083
422 Ga0501044_0000347
423 Ga0501044_0123334
424 Ga0501044_0134181
425 nmdc:mga06r32_6537_c1
426 Ga0500635_0005478
427 Ga0500643_003612
428 Ga0500658_0000276
429 Ga0500622_0000123
430 Ga0466962_0001165
431 2511823640
432 2597859392
433 2599482222
434 2644040051
435 2644126157
436 2738763218
437 2743738924
438 2774391105
439 2776616235
440 2819679867
441 2842831694
442 2842842251
443 2885084612
444 2919190996
445 2923158000
446 2929207565
447 2929926004
448 2939669276
449 2945962202
450 3007397307
451 8003153040
452 8055595121

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

178

302

0.91

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

533

643

0.86

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

397

516

0.82

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

535

638

0.82

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

209

358

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e9m-assembly2.cif.gz_C-2 crystal structure of an oxidoreductase from enterococcus faecalis 0.8769 367 667
4h3v-assembly1.cif.gz_B crystal structure of oxidoreductase domain protein from kribbella flavida 0.874 366 681
6a3g-assembly1.cif.gz_D levoglucosan dehydrogenase, complex with nadh 0.8697 369 681
5yaq-assembly1.cif.gz_D crystal structure of scyllo-inositol dehydrogenase with l-glucose dehydrogenase activity complexed with scyllo-inosose 0.869 369 681
7bvk-assembly2.cif.gz_B udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p212121) 0.8687 369 676
ID Description Score Start End Superfamily
af_Q54H99_9_164_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9747 146 178 3.50.50.60
af_Q54GT1_13_197_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9368 147 179 3.50.50.60
af_Q2G2C7_146_286_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9309 130 265 3.40.50.720
af_Q04869_4_115_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9203 369 474 3.40.50.720
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9191 146 179 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A7C5NSE0-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9496 365 682 GO:0000166
GO:0016491
AF-A0A7C5NSE0-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.938 365 682 GO:0000166
GO:0016491
AF-A0A382C279-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9363 348 682 GO:0000166
GO:0016491
AF-A0A7G8ITA4-F1-model_v4 Oxidoreductase / NAD-binding Rossmann fold family protein 0.9349 1 672 GO:0000166
GO:0016491
AF-X0SYS5-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9313 410 668 GO:0000166
GO:0016491

Map