F339359
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 226 | 159 | 452 | 496 |
Family's Representative Sequence
| Representative Sequence | 3300053125|Ga0500618_002399|Ga0500618_002399_4434_6071 |
| Length | 545 |
| Sequence | MRNSTNGKHALSRSGQSAKLLKERDKPDGSQSSATVSRRTRDESQNRSPLMLKVRKVGIDTYPENTAFLRRGDNGYGAEQFRALRKIEISAGGCGILATLAITDDPQIVAPGEIGLGEQAFRRLGLPEGTLVAIAQAKPPQSLEAVRRKIGGDVLSDSEISAIIADIAAYRYSPMEIGAFLVACAGFMTTQETLALTVAMADAGNRLEWHMPLVVDKHCIGGIPGNRTSMIVVPIVAAHGLVMPKTSSRAITSPSGTADTMEVLANVDLTADQVKAIVAREKAVLAWGGRINLSPADDVLISVERPLRIDTFEQMVASILSKKLAAGSTHLVIDIPVGPTAKVRSTSEAARLRKLFEYVAHKVGLTIQVILTDGSQPIGRGVGPVLEARDVMAVLRNDEDAPEDLRERALLLAGHVLDFDPALEGGRGYARALELLASGQALAAMERLIAAQGPQRETFKLGNFRHEILAGEDGSVAAIDCHLVARVARLAGAPMDKGAGIDLLHKVGDQVRRGEPLYRIHAESETGLAFARDLATSDTGYRILS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 2 | 3300001915 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 | Metagenome | Rhizosphere |
| 3 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 4 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 5 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 6 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 7 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 8 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 9 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 24 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 25 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 26 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 27 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 28 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 29 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 30 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 31 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 32 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 33 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 34 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 35 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 36 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 37 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 38 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 39 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 85 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 89 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 90 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 91 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 92 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 93 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 94 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 95 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 96 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 97 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 98 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 99 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 100 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 101 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 102 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 103 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 104 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 105 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 106 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 107 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 108 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 109 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 110 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 111 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 112 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 113 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 120 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 121 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 122 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 123 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 124 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 125 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 126 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 127 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 135 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 136 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 137 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 138 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 139 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 141 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 142 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 143 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 144 | 3300053724 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere | Metagenome | Endosphere |
| 145 | 2522572158 | Azospirillum halopraeferens DSM 3675 | Isolate | Unclassified |
| 146 | 2524023250 | Niveispirillum irakense DSM 11586 | Isolate | Unclassified |
| 147 | 2547132374 | Acidovorax radicis N35 | Isolate | Unclassified |
| 148 | 2582581305 | Rhizorhabdus wittichii YR128 | Isolate | Rhizosphere |
| 149 | 2643221570 | Acidovorax sp. Root568 | Isolate | Unclassified |
| 150 | 2643221596 | Acidovorax sp. Root70 | Isolate | Unclassified |
| 151 | 2643221605 | Sphingomonas sp. Root710 | Isolate | Unclassified |
| 152 | 2643221652 | Acidovorax sp. Root402 | Isolate | Unclassified |
| 153 | 2643221717 | Acidovorax sp. Root267 | Isolate | Unclassified |
| 154 | 2883291878 | Hypericibacter terrae R5913 | Isolate | Rhizosphere |
| 155 | 2883354860 | Hypericibacter adhaerens R5959 | Isolate | Rhizosphere |
| 156 | 2897803580 | Azospirillum doebereinerae GSF71 | Isolate | Unclassified |
| 157 | 2920822456 | Ensifer sesbaniae CCBAU 65729 | Isolate | Unclassified |
| 158 | 2990710928 | Acidovorax delafieldii SLBN-75 | Isolate | Rhizosphere |
| 159 | 8054002106 | Azospirillum lipoferum 59b | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.36 |
| Metatranscriptomes | 0 |
| Isolates | 6.64 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.18 |
| Nodule | 0 |
| Rhizoplane | 2.21 |
| Rhizosphere | 79.2 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0500618_002399 | 3300053125 | Bacteria | 7130 |
| 2 | JGI24741J21665_1000225 | 3300001915 | Bacteria | 16935 |
| 3 | JGI24740J21852_10000191 | 3300001979 | Bacteria | 25134 |
| 4 | JGI24739J22299_10000432 | 3300001989 | Bacteria | 14541 |
| 5 | JGI24737J22298_10000331 | 3300001990 | Bacteria | 15806 |
| 6 | JGI24735J21928_10000459 | 3300002067 | Bacteria | 14353 |
| 7 | JGI24738J21930_10004165 | 3300002075 | Bacteria | 3566 |
| 8 | JGI24738J21930_10004292 | 3300002075 | Bacteria | 3507 |
| 9 | Ga0065165_1001653 | 3300005262 | Bacteria | 22606 |
| 10 | Ga0065704_10016194 | 3300005289 | Bacteria | 1955 |
| 11 | Ga0065704_10081132 | 3300005289 | Bacteria | 3814 |
| 12 | Ga0070658_10002177 | 3300005327 | Bacteria | 16444 |
| 13 | Ga0070683_100032478 | 3300005329 | Bacteria | 4754 |
| 14 | Ga0070680_100004286 | 3300005336 | Bacteria | 10717 |
| 15 | Ga0070660_100013226 | 3300005339 | Bacteria | 5914 |
| 16 | Ga0070661_100000353 | 3300005344 | Bacteria | 36189 |
| 17 | Ga0070668_100000104 | 3300005347 | Bacteria | 51950 |
| 18 | Ga0070659_100006449 | 3300005366 | Bacteria | 8474 |
| 19 | Ga0070659_100009056 | 3300005366 | Bacteria | 7305 |
| 20 | Ga0070659_100040030 | 3300005366 | Bacteria | 3662 |
| 21 | Ga0070667_100168683 | 3300005367 | Bacteria | 1931 |
| 22 | Ga0070662_100000758 | 3300005457 | Bacteria | 19818 |
| 23 | Ga0070662_100012566 | 3300005457 | Bacteria | 5617 |
| 24 | Ga0070662_100025938 | 3300005457 | Bacteria | 4052 |
| 25 | Ga0070681_10062627 | 3300005458 | Bacteria | 3693 |
| 26 | Ga0068853_100004840 | 3300005539 | Bacteria | 10465 |
| 27 | Ga0068853_100009387 | 3300005539 | Bacteria | 7888 |
| 28 | Ga0068853_100040004 | 3300005539 | Bacteria | 3999 |
| 29 | Ga0068853_100119206 | 3300005539 | Bacteria | 2352 |
| 30 | Ga0068855_100002883 | 3300005563 | Bacteria | 21060 |
| 31 | Ga0068855_100006174 | 3300005563 | Bacteria | 14607 |
| 32 | Ga0070664_100002921 | 3300005564 | Bacteria | 13833 |
| 33 | Ga0070664_100005101 | 3300005564 | Bacteria | 10539 |
| 34 | Ga0070664_100006761 | 3300005564 | Bacteria | 9249 |
| 35 | Ga0070664_100032846 | 3300005564 | Bacteria | 4342 |
| 36 | Ga0068857_100030708 | 3300005577 | Bacteria | 4746 |
| 37 | Ga0068854_100001656 | 3300005578 | Bacteria | 13564 |
| 38 | Ga0068854_100002015 | 3300005578 | Bacteria | 12440 |
| 39 | Ga0068856_100032284 | 3300005614 | Bacteria | 5125 |
| 40 | Ga0068856_100091963 | 3300005614 | Bacteria | 3018 |
| 41 | Ga0068852_100038790 | 3300005616 | Bacteria | 4006 |
| 42 | Ga0068851_10003790 | 3300005834 | Bacteria | 6764 |
| 43 | Ga0068863_100018173 | 3300005841 | Bacteria | 6733 |
| 44 | Ga0068863_100103933 | 3300005841 | Bacteria | 2702 |
| 45 | Ga0068858_100002345 | 3300005842 | Bacteria | 19122 |
| 46 | Ga0068858_100004804 | 3300005842 | Bacteria | 13238 |
| 47 | Ga0068860_100000115 | 3300005843 | Bacteria | 128506 |
| 48 | Ga0068860_100005205 | 3300005843 | Bacteria | 13209 |
| 49 | Ga0068862_100001950 | 3300005844 | Bacteria | 18701 |
| 50 | Ga0068862_100003108 | 3300005844 | Bacteria | 14481 |
| 51 | Ga0068862_100006438 | 3300005844 | Bacteria | 9759 |
| 52 | Ga0075365_10120093 | 3300006038 | Bacteria | 1812 |
| 53 | Ga0075368_10000207 | 3300006042 | Bacteria | 16358 |
| 54 | Ga0075363_100000129 | 3300006048 | Bacteria | 18151 |
| 55 | Ga0075362_10000024 | 3300006177 | Bacteria | 59846 |
| 56 | Ga0075369_10003607 | 3300006186 | Bacteria | 5647 |
| 57 | Ga0075366_10000115 | 3300006195 | Bacteria | 33019 |
| 58 | Ga0075370_10016910 | 3300006353 | Bacteria | 3933 |
| 59 | Ga0105251_10037818 | 3300009011 | Bacteria | 2366 |
| 60 | Ga0105240_10011210 | 3300009093 | Bacteria | 12507 |
| 61 | Ga0105240_10128152 | 3300009093 | Bacteria | 3047 |
| 62 | Ga0105247_10002625 | 3300009101 | Bacteria | 12136 |
| 63 | Ga0114129_10051396 | 3300009147 | Bacteria | 5786 |
| 64 | Ga0105241_10030349 | 3300009174 | Bacteria | 4039 |
| 65 | Ga0105241_10114342 | 3300009174 | Bacteria | 2165 |
| 66 | Ga0105248_10001305 | 3300009177 | Bacteria | 27730 |
| 67 | Ga0105248_10007667 | 3300009177 | Bacteria | 11861 |
| 68 | Ga0105248_10044435 | 3300009177 | Bacteria | 4981 |
| 69 | Ga0105237_10042933 | 3300009545 | Bacteria | 4557 |
| 70 | Ga0105238_10004208 | 3300009551 | Bacteria | 14288 |
| 71 | Ga0105249_10001214 | 3300009553 | Bacteria | 22721 |
| 72 | Ga0105249_10017524 | 3300009553 | Bacteria | 6360 |
| 73 | Ga0105239_10016164 | 3300010375 | Bacteria | 8257 |
| 74 | Ga0157373_10000106 | 3300013100 | Bacteria | 65255 |
| 75 | Ga0157373_10001664 | 3300013100 | Bacteria | 16979 |
| 76 | Ga0157373_10022440 | 3300013100 | Bacteria | 4580 |
| 77 | Ga0157371_10002695 | 3300013102 | Bacteria | 16774 |
| 78 | Ga0157371_10013002 | 3300013102 | Bacteria | 6337 |
| 79 | Ga0157370_10001823 | 3300013104 | Bacteria | 26240 |
| 80 | Ga0157369_10001208 | 3300013105 | Bacteria | 32161 |
| 81 | Ga0157369_10018858 | 3300013105 | Bacteria | 7730 |
| 82 | Ga0157372_10004254 | 3300013307 | Bacteria | 15307 |
| 83 | Ga0157372_10022761 | 3300013307 | Bacteria | 6785 |
| 84 | Ga0157380_10047949 | 3300014326 | Bacteria | 3362 |
| 85 | Ga0157380_10071217 | 3300014326 | Bacteria | 2812 |
| 86 | Ga0209758_1000883 | 3300025297 | Bacteria | 41176 |
| 87 | Ga0209050_1000038 | 3300025298 | Bacteria | 412635 |
| 88 | Ga0209257_1000606 | 3300025304 | Bacteria | 58788 |
| 89 | Ga0207713_1033597 | 3300025735 | Bacteria | 2238 |
| 90 | Ga0207710_10004080 | 3300025900 | Bacteria | 6416 |
| 91 | Ga0207647_10001163 | 3300025904 | Bacteria | 20284 |
| 92 | Ga0207705_10000769 | 3300025909 | Bacteria | 26391 |
| 93 | Ga0207707_10012949 | 3300025912 | Bacteria | 7261 |
| 94 | Ga0207695_10017098 | 3300025913 | Bacteria | 8457 |
| 95 | Ga0207695_10089829 | 3300025913 | Bacteria | 3088 |
| 96 | Ga0207660_10047921 | 3300025917 | Bacteria | 3023 |
| 97 | Ga0207657_10000048 | 3300025919 | Bacteria | 111458 |
| 98 | Ga0207649_10000959 | 3300025920 | Bacteria | 17899 |
| 99 | Ga0207652_10034041 | 3300025921 | Bacteria | 4292 |
| 100 | Ga0207694_10028782 | 3300025924 | Bacteria | 4237 |
| 101 | Ga0207690_10005902 | 3300025932 | Bacteria | 7249 |
| 102 | Ga0207690_10010370 | 3300025932 | Bacteria | 5534 |
| 103 | Ga0207690_10079783 | 3300025932 | Bacteria | 2282 |
| 104 | Ga0207706_10000381 | 3300025933 | Bacteria | 48362 |
| 105 | Ga0207706_10021437 | 3300025933 | Bacteria | 5803 |
| 106 | Ga0207706_10043114 | 3300025933 | Bacteria | 3998 |
| 107 | Ga0207711_10001874 | 3300025941 | Bacteria | 19177 |
| 108 | Ga0207661_10015099 | 3300025944 | Bacteria | 5675 |
| 109 | Ga0207679_10002316 | 3300025945 | Bacteria | 11716 |
| 110 | Ga0207679_10012963 | 3300025945 | Bacteria | 5455 |
| 111 | Ga0207679_10018526 | 3300025945 | Bacteria | 4666 |
| 112 | Ga0207679_10036500 | 3300025945 | Bacteria | 3486 |
| 113 | Ga0207667_10012385 | 3300025949 | Bacteria | 9829 |
| 114 | Ga0207667_10020862 | 3300025949 | Bacteria | 7274 |
| 115 | Ga0207712_10000658 | 3300025961 | Bacteria | 26859 |
| 116 | Ga0207640_10003854 | 3300025981 | Bacteria | 8093 |
| 117 | Ga0207640_10015400 | 3300025981 | Bacteria | 4426 |
| 118 | Ga0207703_10000534 | 3300026035 | Bacteria | 39219 |
| 119 | Ga0207703_10004529 | 3300026035 | Bacteria | 11400 |
| 120 | Ga0207639_10000552 | 3300026041 | Bacteria | 25704 |
| 121 | Ga0207639_10002596 | 3300026041 | Bacteria | 12126 |
| 122 | Ga0207639_10010089 | 3300026041 | Bacteria | 6531 |
| 123 | Ga0207639_10094161 | 3300026041 | Bacteria | 2404 |
| 124 | Ga0207678_10000374 | 3300026067 | Bacteria | 40903 |
| 125 | Ga0207702_10017000 | 3300026078 | Bacteria | 6020 |
| 126 | Ga0207702_10088510 | 3300026078 | Bacteria | 2705 |
| 127 | Ga0207641_10032004 | 3300026088 | Bacteria | 4365 |
| 128 | Ga0207641_10095579 | 3300026088 | Bacteria | 2609 |
| 129 | Ga0207674_10004414 | 3300026116 | Bacteria | 16931 |
| 130 | Ga0207674_10054933 | 3300026116 | Bacteria | 4052 |
| 131 | Ga0207698_10018809 | 3300026142 | Bacteria | 4717 |
| 132 | Ga0209813_10000049 | 3300027866 | Bacteria | 48800 |
| 133 | Ga0209974_10005242 | 3300027876 | Bacteria | 4574 |
| 134 | Ga0268265_10001082 | 3300028380 | Bacteria | 24260 |
| 135 | Ga0268265_10001711 | 3300028380 | Bacteria | 17824 |
| 136 | Ga0268265_10003650 | 3300028380 | Bacteria | 10977 |
| 137 | Ga0268264_10000002 | 3300028381 | Bacteria | 1153045 |
| 138 | Ga0268264_10001671 | 3300028381 | Bacteria | 20419 |
| 139 | Ga0265338_10083170 | 3300028800 | Bacteria | 2678 |
| 140 | Ga0265330_10000054 | 3300031235 | Bacteria | 101420 |
| 141 | Ga0265332_10000002 | 3300031238 | Bacteria | 709510 |
| 142 | Ga0307408_100000319 | 3300031548 | Bacteria | 46191 |
| 143 | Ga0307408_100000372 | 3300031548 | Bacteria | 40878 |
| 144 | Ga0265314_10000012 | 3300031711 | Bacteria | 415184 |
| 145 | Ga0316576_10092818 | 3300031727 | Bacteria | 2249 |
| 146 | Ga0316576_10111024 | 3300031727 | Bacteria | 2055 |
| 147 | Ga0316578_10009132 | 3300031728 | Bacteria | 5086 |
| 148 | Ga0316577_10037622 | 3300031733 | Bacteria | 2705 |
| 149 | Ga0307413_10087883 | 3300031824 | Bacteria | 2015 |
| 150 | Ga0307410_10004527 | 3300031852 | Bacteria | 7200 |
| 151 | Ga0307406_10008692 | 3300031901 | Bacteria | 5675 |
| 152 | Ga0307406_10027189 | 3300031901 | Bacteria | 3444 |
| 153 | Ga0307412_10063431 | 3300031911 | Bacteria | 2492 |
| 154 | Ga0307409_100141089 | 3300031995 | Bacteria | 2076 |
| 155 | Ga0307411_10044794 | 3300032005 | Bacteria | 2841 |
| 156 | Ga0316583_10018668 | 3300032133 | Bacteria | 2490 |
| 157 | Ga0307510_10001940 | 3300033180 | Bacteria | 23264 |
| 158 | Ga0316574_0001396 | 3300035398 | Bacteria | 11420 |
| 159 | Ga0316574_0077052 | 3300035398 | Bacteria | 2113 |
| 160 | Ga0316582_0015864 | 3300036647 | Bacteria | 4320 |
| 161 | Ga0316582_0036083 | 3300036647 | Bacteria | 3057 |
| 162 | Ga0316582_0045169 | 3300036647 | Bacteria | 2773 |
| 163 | Ga0316584_0014899 | 3300036712 | Bacteria | 5555 |
| 164 | Ga0316584_0049442 | 3300036712 | Bacteria | 3143 |
| 165 | Ga0316584_0084491 | 3300036712 | Bacteria | 2377 |
| 166 | Ga0436361_0216444 | 3300039447 | Bacteria | 4294 |
| 167 | Ga0439462_0010623 | 3300042015 | Bacteria | 2334 |
| 168 | Ga0451577_0008411 | 3300042876 | Bacteria | 10043 |
| 169 | Ga0451577_0009306 | 3300042876 | Bacteria | 9471 |
| 170 | Ga0453684_0000015 | 3300044712 | Bacteria | 969198 |
| 171 | Ga0453684_0000020 | 3300044712 | Bacteria | 879938 |
| 172 | Ga0453684_0006869 | 3300044712 | Bacteria | 21364 |
| 173 | Ga0466959_0043008 | 3300045049 | Bacteria | 3332 |
| 174 | Ga0451576_0008683 | 3300045051 | Bacteria | 11894 |
| 175 | Ga0495583_0000290 | 3300046506 | Bacteria | 79731 |
| 176 | Ga0495643_0021294 | 3300046522 | Bacteria | 3722 |
| 177 | Ga0495648_0000013 | 3300046524 | Bacteria | 289090 |
| 178 | Ga0495669_0016290 | 3300046684 | Bacteria | 3182 |
| 179 | Ga0495671_0000018 | 3300046692 | Bacteria | 291470 |
| 180 | Ga0495673_0000130 | 3300047469 | Bacteria | 138192 |
| 181 | Ga0496102_0036456 | 3300048905 | Bacteria | 4431 |
| 182 | Ga0496110_0060427 | 3300048913 | Bacteria | 3342 |
| 183 | Ga0496110_0071522 | 3300048913 | Bacteria | 3076 |
| 184 | Ga0496113_0015567 | 3300048916 | Bacteria | 5233 |
| 185 | Ga0496113_0122832 | 3300048916 | Bacteria | 2032 |
| 186 | Ga0496122_0007027 | 3300048925 | Bacteria | 12655 |
| 187 | Ga0496123_0014650 | 3300048926 | Bacteria | 6481 |
| 188 | Ga0496124_0007255 | 3300048927 | Bacteria | 11823 |
| 189 | Ga0496124_0049499 | 3300048927 | Bacteria | 3585 |
| 190 | Ga0496125_0007795 | 3300048928 | Bacteria | 11323 |
| 191 | Ga0496125_0053959 | 3300048928 | Bacteria | 3290 |
| 192 | Ga0496126_0072227 | 3300048929 | Bacteria | 3070 |
| 193 | Ga0501037_0058394 | 3300049573 | Bacteria | 2816 |
| 194 | Ga0501067_0101128 | 3300049583 | Bacteria | 1602 |
| 195 | Ga0501070_0035484 | 3300049586 | Bacteria | 4167 |
| 196 | Ga0501073_0061456 | 3300049589 | Bacteria | 2621 |
| 197 | Ga0501080_0012525 | 3300049742 | Bacteria | 7778 |
| 198 | Ga0501080_0023744 | 3300049742 | Bacteria | 5682 |
| 199 | Ga0501035_0003968 | 3300049822 | Bacteria | 14101 |
| 200 | Ga0501044_0031609 | 3300049823 | Bacteria | 5571 |
| 201 | nmdc:mga03683_2_c1 | 3300050489 | Bacteria | 289140 |
| 202 | nmdc:mga03n38_212_c1 | 3300050490 | Bacteria | 13421 |
| 203 | nmdc:mga0k408_4_c1 | 3300050493 | Bacteria | 239080 |
| 204 | nmdc:mga06z11_97_c1 | 3300050494 | Bacteria | 37468 |
| 205 | nmdc:mga04h51_34_c1 | 3300050495 | Bacteria | 46979 |
| 206 | nmdc:mga05p37_140804_c1 | 3300050507 | Bacteria | 2955 |
| 207 | nmdc:mga0sz30_3518_c1 | 3300050516 | Bacteria | 5647 |
| 208 | Ga0500643_001437 | 3300053087 | Bacteria | 13735 |
| 209 | Ga0500655_000058 | 3300053133 | Bacteria | 30451 |
| 210 | Ga0500590_006231 | 3300053148 | Bacteria | 5795 |
| 211 | Ga0500570_026974 | 3300053724 | Bacteria | 3142 |
| 212 | 2523104384 | 2522572158 | Bacteria | 6514390 |
| 213 | 2524612518 | 2524023250 | Bacteria | 5457705 |
| 214 | 2548497178 | 2547132374 | Bacteria | 5530232 |
| 215 | 2585263505 | 2582581305 | Bacteria | 4895574 |
| 216 | 2643865791 | 2643221570 | Bacteria | 5103772 |
| 217 | 2643993085 | 2643221596 | Bacteria | 5006805 |
| 218 | 2644039689 | 2643221605 | Bacteria | 4772303 |
| 219 | 2644294333 | 2643221652 | Bacteria | 5140275 |
| 220 | 2644647500 | 2643221717 | Bacteria | 5676132 |
| 221 | 2883294630 | 2883291878 | Bacteria | 5894118 |
| 222 | 2883356871 | 2883354860 | Bacteria | 5865246 |
| 223 | 2897809008 | 2897803580 | Bacteria | 7000062 |
| 224 | 2920822541 | 2920822456 | Bacteria | 6897201 |
| 225 | 2990712487 | 2990710928 | Bacteria | 5002431 |
| 226 | 8054007007 | 8054002106 | Bacteria | 7987183 |
| 227 | Ga0500618_002399 | |||
| 228 | JGI24741J21665_1000225 | |||
| 229 | JGI24740J21852_10000191 | |||
| 230 | JGI24739J22299_10000432 | |||
| 231 | JGI24737J22298_10000331 | |||
| 232 | JGI24735J21928_10000459 | |||
| 233 | JGI24738J21930_10004165 | |||
| 234 | JGI24738J21930_10004292 | |||
| 235 | Ga0065165_1001653 | |||
| 236 | Ga0065704_10016194 | |||
| 237 | Ga0065704_10081132 | |||
| 238 | Ga0070658_10002177 | |||
| 239 | Ga0070683_100032478 | |||
| 240 | Ga0070680_100004286 | |||
| 241 | Ga0070660_100013226 | |||
| 242 | Ga0070661_100000353 | |||
| 243 | Ga0070668_100000104 | |||
| 244 | Ga0070659_100006449 | |||
| 245 | Ga0070659_100009056 | |||
| 246 | Ga0070659_100040030 | |||
| 247 | Ga0070667_100168683 | |||
| 248 | Ga0070662_100000758 | |||
| 249 | Ga0070662_100012566 | |||
| 250 | Ga0070662_100025938 | |||
| 251 | Ga0070681_10062627 | |||
| 252 | Ga0068853_100004840 | |||
| 253 | Ga0068853_100009387 | |||
| 254 | Ga0068853_100040004 | |||
| 255 | Ga0068853_100119206 | |||
| 256 | Ga0068855_100002883 | |||
| 257 | Ga0068855_100006174 | |||
| 258 | Ga0070664_100002921 | |||
| 259 | Ga0070664_100005101 | |||
| 260 | Ga0070664_100006761 | |||
| 261 | Ga0070664_100032846 | |||
| 262 | Ga0068857_100030708 | |||
| 263 | Ga0068854_100001656 | |||
| 264 | Ga0068854_100002015 | |||
| 265 | Ga0068856_100032284 | |||
| 266 | Ga0068856_100091963 | |||
| 267 | Ga0068852_100038790 | |||
| 268 | Ga0068851_10003790 | |||
| 269 | Ga0068863_100018173 | |||
| 270 | Ga0068863_100103933 | |||
| 271 | Ga0068858_100002345 | |||
| 272 | Ga0068858_100004804 | |||
| 273 | Ga0068860_100000115 | |||
| 274 | Ga0068860_100005205 | |||
| 275 | Ga0068862_100001950 | |||
| 276 | Ga0068862_100003108 | |||
| 277 | Ga0068862_100006438 | |||
| 278 | Ga0075365_10120093 | |||
| 279 | Ga0075368_10000207 | |||
| 280 | Ga0075363_100000129 | |||
| 281 | Ga0075362_10000024 | |||
| 282 | Ga0075369_10003607 | |||
| 283 | Ga0075366_10000115 | |||
| 284 | Ga0075370_10016910 | |||
| 285 | Ga0105251_10037818 | |||
| 286 | Ga0105240_10011210 | |||
| 287 | Ga0105240_10128152 | |||
| 288 | Ga0105247_10002625 | |||
| 289 | Ga0114129_10051396 | |||
| 290 | Ga0105241_10030349 | |||
| 291 | Ga0105241_10114342 | |||
| 292 | Ga0105248_10001305 | |||
| 293 | Ga0105248_10007667 | |||
| 294 | Ga0105248_10044435 | |||
| 295 | Ga0105237_10042933 | |||
| 296 | Ga0105238_10004208 | |||
| 297 | Ga0105249_10001214 | |||
| 298 | Ga0105249_10017524 | |||
| 299 | Ga0105239_10016164 | |||
| 300 | Ga0157373_10000106 | |||
| 301 | Ga0157373_10001664 | |||
| 302 | Ga0157373_10022440 | |||
| 303 | Ga0157371_10002695 | |||
| 304 | Ga0157371_10013002 | |||
| 305 | Ga0157370_10001823 | |||
| 306 | Ga0157369_10001208 | |||
| 307 | Ga0157369_10018858 | |||
| 308 | Ga0157372_10004254 | |||
| 309 | Ga0157372_10022761 | |||
| 310 | Ga0157380_10047949 | |||
| 311 | Ga0157380_10071217 | |||
| 312 | Ga0209758_1000883 | |||
| 313 | Ga0209050_1000038 | |||
| 314 | Ga0209257_1000606 | |||
| 315 | Ga0207713_1033597 | |||
| 316 | Ga0207710_10004080 | |||
| 317 | Ga0207647_10001163 | |||
| 318 | Ga0207705_10000769 | |||
| 319 | Ga0207707_10012949 | |||
| 320 | Ga0207695_10017098 | |||
| 321 | Ga0207695_10089829 | |||
| 322 | Ga0207660_10047921 | |||
| 323 | Ga0207657_10000048 | |||
| 324 | Ga0207649_10000959 | |||
| 325 | Ga0207652_10034041 | |||
| 326 | Ga0207694_10028782 | |||
| 327 | Ga0207690_10005902 | |||
| 328 | Ga0207690_10010370 | |||
| 329 | Ga0207690_10079783 | |||
| 330 | Ga0207706_10000381 | |||
| 331 | Ga0207706_10021437 | |||
| 332 | Ga0207706_10043114 | |||
| 333 | Ga0207711_10001874 | |||
| 334 | Ga0207661_10015099 | |||
| 335 | Ga0207679_10002316 | |||
| 336 | Ga0207679_10012963 | |||
| 337 | Ga0207679_10018526 | |||
| 338 | Ga0207679_10036500 | |||
| 339 | Ga0207667_10012385 | |||
| 340 | Ga0207667_10020862 | |||
| 341 | Ga0207712_10000658 | |||
| 342 | Ga0207640_10003854 | |||
| 343 | Ga0207640_10015400 | |||
| 344 | Ga0207703_10000534 | |||
| 345 | Ga0207703_10004529 | |||
| 346 | Ga0207639_10000552 | |||
| 347 | Ga0207639_10002596 | |||
| 348 | Ga0207639_10010089 | |||
| 349 | Ga0207639_10094161 | |||
| 350 | Ga0207678_10000374 | |||
| 351 | Ga0207702_10017000 | |||
| 352 | Ga0207702_10088510 | |||
| 353 | Ga0207641_10032004 | |||
| 354 | Ga0207641_10095579 | |||
| 355 | Ga0207674_10004414 | |||
| 356 | Ga0207674_10054933 | |||
| 357 | Ga0207698_10018809 | |||
| 358 | Ga0209813_10000049 | |||
| 359 | Ga0209974_10005242 | |||
| 360 | Ga0268265_10001082 | |||
| 361 | Ga0268265_10001711 | |||
| 362 | Ga0268265_10003650 | |||
| 363 | Ga0268264_10000002 | |||
| 364 | Ga0268264_10001671 | |||
| 365 | Ga0265338_10083170 | |||
| 366 | Ga0265330_10000054 | |||
| 367 | Ga0265332_10000002 | |||
| 368 | Ga0307408_100000319 | |||
| 369 | Ga0307408_100000372 | |||
| 370 | Ga0265314_10000012 | |||
| 371 | Ga0316576_10092818 | |||
| 372 | Ga0316576_10111024 | |||
| 373 | Ga0316578_10009132 | |||
| 374 | Ga0316577_10037622 | |||
| 375 | Ga0307413_10087883 | |||
| 376 | Ga0307410_10004527 | |||
| 377 | Ga0307406_10008692 | |||
| 378 | Ga0307406_10027189 | |||
| 379 | Ga0307412_10063431 | |||
| 380 | Ga0307409_100141089 | |||
| 381 | Ga0307411_10044794 | |||
| 382 | Ga0316583_10018668 | |||
| 383 | Ga0307510_10001940 | |||
| 384 | Ga0316574_0001396 | |||
| 385 | Ga0316574_0077052 | |||
| 386 | Ga0316582_0015864 | |||
| 387 | Ga0316582_0036083 | |||
| 388 | Ga0316582_0045169 | |||
| 389 | Ga0316584_0014899 | |||
| 390 | Ga0316584_0049442 | |||
| 391 | Ga0316584_0084491 | |||
| 392 | Ga0436361_0216444 | |||
| 393 | Ga0439462_0010623 | |||
| 394 | Ga0451577_0008411 | |||
| 395 | Ga0451577_0009306 | |||
| 396 | Ga0453684_0000015 | |||
| 397 | Ga0453684_0000020 | |||
| 398 | Ga0453684_0006869 | |||
| 399 | Ga0466959_0043008 | |||
| 400 | Ga0451576_0008683 | |||
| 401 | Ga0495583_0000290 | |||
| 402 | Ga0495643_0021294 | |||
| 403 | Ga0495648_0000013 | |||
| 404 | Ga0495669_0016290 | |||
| 405 | Ga0495671_0000018 | |||
| 406 | Ga0495673_0000130 | |||
| 407 | Ga0496102_0036456 | |||
| 408 | Ga0496110_0060427 | |||
| 409 | Ga0496110_0071522 | |||
| 410 | Ga0496113_0015567 | |||
| 411 | Ga0496113_0122832 | |||
| 412 | Ga0496122_0007027 | |||
| 413 | Ga0496123_0014650 | |||
| 414 | Ga0496124_0007255 | |||
| 415 | Ga0496124_0049499 | |||
| 416 | Ga0496125_0007795 | |||
| 417 | Ga0496125_0053959 | |||
| 418 | Ga0496126_0072227 | |||
| 419 | Ga0501037_0058394 | |||
| 420 | Ga0501067_0101128 | |||
| 421 | Ga0501070_0035484 | |||
| 422 | Ga0501073_0061456 | |||
| 423 | Ga0501080_0012525 | |||
| 424 | Ga0501080_0023744 | |||
| 425 | Ga0501035_0003968 | |||
| 426 | Ga0501044_0031609 | |||
| 427 | nmdc:mga03683_2_c1 | |||
| 428 | nmdc:mga03n38_212_c1 | |||
| 429 | nmdc:mga0k408_4_c1 | |||
| 430 | nmdc:mga06z11_97_c1 | |||
| 431 | nmdc:mga04h51_34_c1 | |||
| 432 | nmdc:mga05p37_140804_c1 | |||
| 433 | nmdc:mga0sz30_3518_c1 | |||
| 434 | Ga0500643_001437 | |||
| 435 | Ga0500655_000058 | |||
| 436 | Ga0500590_006231 | |||
| 437 | Ga0500570_026974 | |||
| 438 | 2523104384 | |||
| 439 | 2524612518 | |||
| 440 | 2548497178 | |||
| 441 | 2585263505 | |||
| 442 | 2643865791 | |||
| 443 | 2643993085 | |||
| 444 | 2644039689 | |||
| 445 | 2644294333 | |||
| 446 | 2644647500 | |||
| 447 | 2883294630 | |||
| 448 | 2883356871 | |||
| 449 | 2897809008 | |||
| 450 | 2920822541 | |||
| 451 | 2990712487 | |||
| 452 | 8054007007 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1uou-assembly1.cif.gz_A-2 | crystal structure of human thymidine phosphorylase in complex with a small molecule inhibitor | 0.8815 | 89 | 442 |
| 4ga5-assembly4.cif.gz_D | crystal structure of amp phosphorylase c-terminal deletion mutant in the apo-form | 0.8766 | 2 | 478 |
| 2wk5-assembly4.cif.gz_D | structural features of native human thymidine phosphorylase and in complex with 5-iodouracil | 0.8736 | 91 | 453 |
| 4ga4-assembly1.cif.gz_B | crystal structure of amp phosphorylase n-terminal deletion mutant | 0.8716 | 90 | 477 |
| 4ga5-assembly4.cif.gz_D | crystal structure of amp phosphorylase c-terminal deletion mutant in the apo-form | 0.8714 | 2 | 478 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4ga5B02 | Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3; | 0.9464 | 90 | 326 | 1.20.970.50 |
| 4ga4A01 | Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.9378 | 90 | 155 | 1.20.970.10 |
| 4ga5B02 | Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3; | 0.9342 | 90 | 326 | 1.20.970.50 |
| 4ga5H03 | Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.9339 | 154 | 405 | 3.40.1030.10 |
| 4ga4B01 | Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.9297 | 90 | 155 | 1.20.970.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3S0F1Z1-F1-model_v4 | deleted | 0.9683 | 2 | 151 |
|
| AF-A0A3D8GX24-F1-model_v4 | thymidine phosphorylase (EC 2.4.2.4) | 0.9671 | 79 | 390 |
GO:0004645
GO:0005829 GO:0006206 GO:0009032 |
| AF-A0A353D2K5-F1-model_v4 | thymidine phosphorylase (EC 2.4.2.4) | 0.9669 | 170 | 389 |
GO:0004645
GO:0005829 GO:0006206 GO:0009032 |
| AF-K2DY58-F1-model_v4 | Glycosyl transferase family 3 domain-containing protein | 0.9589 | 150 | 346 |
GO:0004645
GO:0005829 GO:0006206 |
| AF-A0A2I0NQN8-F1-model_v4 | AMP phosphorylase (EC 2.4.2.57) | 0.9588 | 80 | 405 |
GO:0004645
GO:0005829 GO:0006196 GO:0006206 GO:0016763 GO:0046125 |