F339387

General Info

Members Datasets Scaffolds Average Seq Length
226 159 452 650

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221603|2644030414
Length 748
Sequence LWFAVACGVLAVIYGLMSRSWILSQDAGNARMQEIALAIQQGAAAYLGRQYRTIAIVGVVLFILIAILPGLGLKTAAGFLIGAVLSGACGFIGMNVSVRANVRTAQAATKGMNEALDVAFRGGAITGMLVAGLGLLGVVLFYWYLTSSGANASSIHDVLKPLIGLGFGASLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYVVTLIATMLLGALVIKGAEMQAVLYPLLLAAVSIPASIIGCWMVKAKPGKKIMSALYTGLWWAAGLSLIGFAVVTWMVLPEPMRVPMMGSAVVGIVLTGLMVYITEYYTGTDFKPVRHIAEASTTGHGTNIIAGLGVSMKSTAYPVLSVCVAILVAYWLGGLYGVAIAATAMLSMAGIIVALDAYGPITDNAGGIAEMSELPDSVRAITDPLDAVGNTTKAVTKGYAIGSAGLAALVLFADYTHALDSVGKSTSFDLSNPMVIVGLFIGGLIPYLFGAMAMEAVGRAAGAVVIEVRRQFRDIKGIMDGSGKPEYDKAVDMLTASAIKEMVIPSLLPVVVPVLVGMLLGPAALGGLLMGTIVTGLFVAISMTTGGGAWDNAKKYIEDGHHGGKGSEAHKAAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLLVPLLPATAPQAGGAHGPASITAPAGTPPTTDSAAPIASFSGGAELPAGVALVVNSSLLTPPAPCQSKKIHRSHLSRYSLGLV

Samples

Sample ID Description Type Environment
1 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
24 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
25 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
26 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
27 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
28 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
31 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
36 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
38 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
41 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
42 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
43 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
46 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
57 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
58 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
59 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
60 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
65 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
66 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
67 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
69 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
76 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
77 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
82 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
90 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
91 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
95 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
96 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
97 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
98 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
99 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
103 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
104 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
105 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
108 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
109 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
110 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
111 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
112 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
115 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
118 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
119 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
120 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
124 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
125 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
141 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
145 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
146 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
147 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
148 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
149 2643221556 Massilia sp. Root1485 Isolate Unclassified
150 2643221684 Massilia sp. Root133 Isolate Unclassified
151 2643221695 Lysobacter sp. Root494 Isolate Unclassified
152 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
153 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
154 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
155 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
156 2919476304 Duganella sp. 3397 Isolate Unclassified
157 2919513703 Luteimonas sp. 3794 Isolate Unclassified
158 2919675420 Luteimonas terrae 4099 Isolate Unclassified
159 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.04
Metatranscriptomes 1.77
Isolates 6.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.58
Nodule 0
Rhizoplane 1.77
Rhizosphere 67.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000001 3300002737 Bacteria 740113
2 JGI25152J39213_1000060 3300002773 Bacteria 73031
3 JGI25159J45721_1001855 3300002987 Bacteria 8445
4 JGI25165J46597_1000001 3300003214 Bacteria 1111887
5 JGI25153J46596_10004854 3300003215 Bacteria 7162
6 Ga0055538_1000001 3300003751 Bacteria 1111887
7 Ga0055539_1000001 3300003752 Bacteria 1111887
8 Ga0055533_1000003 3300003756 Bacteria 1111887
9 Ga0055525_1000003 3300003759 Bacteria 962094
10 Ga0055525_1000026 3300003759 Bacteria 345798
11 Ga0055535_1000702 3300003761 Bacteria 25845
12 Ga0055529_1000340 3300003763 Bacteria 52215
13 Ga0055526_1013226 3300003771 Bacteria 3510
14 Ga0055524_1005246 3300003775 Bacteria 5824
15 Ga0055524_1005459 3300003775 Bacteria 5673
16 Ga0055541_1000001 3300003841 Bacteria 1111887
17 Ga0070682_100009474 3300005337 Bacteria 5511
18 Ga0070662_100003230 3300005457 Bacteria 10132
19 Ga0081538_10002827 3300005981 Bacteria 16610
20 Ga0075362_10005483 3300006177 Bacteria 4647
21 Ga0105250_10000010 3300009092 Bacteria 298384
22 Ga0114129_10138612 3300009147 Bacteria 3337
23 Ga0157371_10000184 3300013102 Bacteria 92100
24 Ga0157375_10117224 3300013308 Bacteria 2768
25 Ga0182008_10001405 3300014497 Bacteria 16197
26 Ga0157379_10001470 3300014968 Bacteria 19421
27 Ga0182006_1000004 3300015261 Bacteria 622190
28 Ga0182006_1011315 3300015261 Bacteria 3929
29 Ga0182007_10000017 3300015262 Bacteria 199097
30 Ga0182007_10000118 3300015262 Bacteria 54536
31 Ga0182007_10003779 3300015262 Bacteria 7052
32 Ga0182005_1000030 3300015265 Bacteria 213092
33 Ga0182005_1000158 3300015265 Bacteria 47201
34 Ga0182005_1001582 3300015265 Bacteria 8964
35 Ga0213872_10000008 3300021361 Bacteria 226283
36 Ga0213872_10000248 3300021361 Bacteria 47632
37 Ga0213872_10001017 3300021361 Bacteria 19543
38 Ga0213875_10002653 3300021388 Bacteria 10582
39 Ga0209436_100863 3300025208 Bacteria 12131
40 Ga0209784_100004 3300025224 Bacteria 1378156
41 Ga0209566_100004 3300025225 Bacteria 1531866
42 Ga0209674_100006 3300025226 Bacteria 1531866
43 Ga0209563_100005 3300025230 Bacteria 1774893
44 Ga0209563_100009 3300025230 Bacteria 1378156
45 Ga0209437_100004 3300025233 Bacteria 1378156
46 Ga0209258_100060 3300025242 Bacteria 319881
47 Ga0207425_1000017 3300025245 Bacteria 423851
48 Ga0207425_1000331 3300025245 Bacteria 33106
49 Ga0209677_100005 3300025253 Bacteria 1378156
50 Ga0209148_1000203 3300025254 Bacteria 105950
51 Ga0209759_1000663 3300025256 Bacteria 31934
52 Ga0209129_1000039 3300025258 Bacteria 322444
53 Ga0209233_1000005 3300025261 Bacteria 1531866
54 Ga0209455_1000093 3300025272 Bacteria 220487
55 Ga0209130_1005857 3300025284 Bacteria 4141
56 Ga0209130_1005862 3300025284 Bacteria 4141
57 Ga0209758_1000192 3300025297 Bacteria 136933
58 Ga0209050_1000168 3300025298 Bacteria 151278
59 Ga0209256_1000207 3300025299 Bacteria 111217
60 Ga0209256_1001310 3300025299 Bacteria 26703
61 Ga0209257_1000806 3300025304 Bacteria 45591
62 Ga0207696_1000133 3300025711 Bacteria 131987
63 Ga0207706_10008572 3300025933 Bacteria 9423
64 Ga0207678_10000473 3300026067 Bacteria 36408
65 Ga0265760_10000954 3300031090 Bacteria 8365
66 Ga0265328_10011172 3300031239 Bacteria 3595
67 Ga0265328_10025920 3300031239 Bacteria 2206
68 Ga0265331_10000161 3300031250 Bacteria 84155
69 Ga0265327_10000043 3300031251 Bacteria 285108
70 Ga0307513_10018754 3300031456 Bacteria 8259
71 Ga0316579_10013424 3300031691 Bacteria 3523
72 Ga0316579_10034496 3300031691 Bacteria 2328
73 Ga0316576_10003376 3300031727 Bacteria 9336
74 Ga0316576_10048475 3300031727 Bacteria 3081
75 Ga0307516_10000202 3300031730 Bacteria 77604
76 Ga0316577_10039025 3300031733 Bacteria 2657
77 Ga0307413_10005158 3300031824 Bacteria 5789
78 Ga0307410_10017031 3300031852 Bacteria 4351
79 Ga0307407_10001896 3300031903 Bacteria 7895
80 Ga0316583_10003159 3300032133 Bacteria 5790
81 Ga0316583_10012471 3300032133 Bacteria 3068
82 Ga0316580_10006332 3300032139 Bacteria 3494
83 Ga0316580_10011739 3300032139 Bacteria 2662
84 Ga0316592_1000379 3300033524 Bacteria 5907
85 Ga0316592_1001131 3300033524 Bacteria 4184
86 Ga0316596_1004146 3300033541 Bacteria 3225
87 Ga0316574_0039453 3300035398 Bacteria 2903
88 Ga0316582_0009748 3300036647 Bacteria 5224
89 Ga0395899_0002457 3300037312 Bacteria 15045
90 Ga0395898_0004228 3300037466 Bacteria 15742
91 Ga0395905_0020727 3300037471 Bacteria 6223
92 Ga0436364_0353649 3300037853 Bacteria 72201
93 Ga0395901_0093747 3300038443 Bacteria 3144
94 Ga0395901_0110526 3300038443 Bacteria 2885
95 Ga0400483_156636 3300039062 Bacteria 26290
96 Ga0400487_41006 3300039110 Bacteria 27982
97 Ga0436360_0563299 3300039438 Bacteria 13164
98 Ga0436361_0041904 3300039447 Bacteria 73505
99 Ga0436361_0048162 3300039447 Bacteria 44153
100 Ga0436361_0182416 3300039447 Bacteria 55509
101 Ga0436361_0318385 3300039447 Bacteria 34319
102 Ga0436361_0784532 3300039447 Bacteria 10452
103 Ga0436361_1063608 3300039447 Bacteria 4164
104 Ga0466969_0000002 3300044656 Bacteria 178693
105 Ga0466969_0018429 3300044656 Bacteria 3636
106 Ga0466972_0000088 3300044658 Bacteria 84167
107 Ga0466972_0003572 3300044658 Bacteria 7730
108 Ga0466966_0043688 3300044684 Bacteria 2871
109 Ga0466961_0005212 3300044693 Bacteria 8181
110 Ga0466963_0016379 3300044694 Bacteria 4609
111 Ga0466964_0003737 3300044706 Bacteria 5575
112 Ga0453684_0050082 3300044712 Bacteria 5499
113 Ga0466957_0019707 3300044842 Bacteria 3968
114 Ga0466959_0000793 3300045049 Bacteria 18583
115 Ga0466959_0016106 3300045049 Bacteria 5456
116 Ga0466958_0000434 3300045836 Bacteria 17307
117 Ga0495617_000026 3300046452 Bacteria 157675
118 Ga0495627_000038 3300046453 Bacteria 198316
119 Ga0495627_000043 3300046453 Bacteria 185855
120 Ga0495590_0007131 3300046457 Bacteria 4325
121 Ga0495651_0004636 3300046462 Bacteria 10512
122 Ga0495653_0019617 3300046463 Bacteria 5483
123 Ga0495650_0000048 3300046471 Bacteria 334427
124 Ga0495605_0000113 3300046474 Bacteria 103900
125 Ga0495605_0000186 3300046474 Bacteria 77457
126 Ga0495584_0000252 3300046491 Bacteria 38603
127 Ga0495584_0004192 3300046491 Bacteria 7779
128 Ga0495585_0000672 3300046492 Bacteria 31390
129 Ga0495585_0012294 3300046492 Bacteria 5042
130 Ga0495585_0014329 3300046492 Bacteria 4621
131 Ga0495585_0025018 3300046492 Bacteria 3421
132 Ga0495607_0000727 3300046501 Bacteria 31636
133 Ga0495607_0001791 3300046501 Bacteria 18333
134 Ga0495607_0006162 3300046501 Bacteria 8478
135 Ga0495583_0000203 3300046506 Bacteria 99978
136 Ga0495583_0001150 3300046506 Bacteria 28793
137 Ga0495583_0018153 3300046506 Bacteria 3711
138 Ga0495606_0002601 3300046507 Bacteria 20643
139 Ga0495608_0039188 3300046511 Bacteria 3178
140 Ga0495616_0000048 3300046513 Bacteria 108577
141 Ga0495616_0011660 3300046513 Bacteria 5026
142 Ga0495628_0000707 3300046516 Bacteria 30850
143 Ga0495631_0002923 3300046518 Bacteria 9464
144 Ga0495632_0000152 3300046519 Bacteria 71699
145 Ga0495643_0000206 3300046522 Bacteria 91463
146 Ga0495643_0006368 3300046522 Bacteria 7794
147 Ga0495643_0008875 3300046522 Bacteria 6322
148 Ga0495643_0023022 3300046522 Bacteria 3546
149 Ga0495642_0001129 3300046528 Bacteria 12277
150 Ga0495642_0002074 3300046528 Bacteria 8300
151 Ga0495654_0007004 3300046530 Bacteria 6350
152 Ga0495609_0000022 3300046538 Bacteria 279488
153 Ga0495609_0001440 3300046538 Bacteria 15843
154 Ga0495621_0005955 3300046539 Bacteria 3536
155 Ga0495597_0000771 3300046542 Bacteria 25342
156 Ga0495597_0000806 3300046542 Bacteria 24735
157 Ga0495597_0004134 3300046542 Bacteria 8071
158 Ga0495633_0000253 3300046558 Bacteria 63420
159 Ga0495668_0000131 3300046616 Bacteria 112755
160 Ga0495668_0000434 3300046616 Bacteria 53950
161 Ga0495661_0000492 3300046665 Bacteria 41365
162 Ga0495661_0019212 3300046665 Bacteria 4482
163 Ga0495661_0025847 3300046665 Bacteria 3787
164 Ga0495661_0030043 3300046665 Bacteria 3462
165 Ga0495588_0010249 3300046674 Bacteria 4352
166 Ga0495669_0001964 3300046684 Bacteria 8448
167 Ga0495671_0000426 3300046692 Bacteria 33503
168 Ga0495649_0026160 3300046694 Bacteria 3247
169 Ga0495589_0000017 3300046794 Bacteria 206113
170 Ga0495589_0000508 3300046794 Bacteria 27530
171 Ga0495589_0005660 3300046794 Bacteria 6587
172 Ga0495660_0000080 3300046810 Bacteria 103751
173 Ga0495660_0000162 3300046810 Bacteria 71874
174 Ga0495660_0000177 3300046810 Bacteria 69130
175 Ga0495672_0000167 3300047320 Bacteria 95937
176 Ga0495672_0000581 3300047320 Bacteria 41296
177 Ga0495672_0016990 3300047320 Bacteria 4875
178 Ga0495683_0000098 3300047323 Bacteria 88510
179 Ga0495683_0024559 3300047323 Bacteria 3092
180 Ga0495687_000140 3300047443 Bacteria 109311
181 Ga0495687_000175 3300047443 Bacteria 94911
182 Ga0495687_001161 3300047443 Bacteria 25444
183 Ga0495687_003548 3300047443 Bacteria 11222
184 Ga0495677_0000002 3300047445 Bacteria 346767
185 Ga0495677_0000530 3300047445 Bacteria 15886
186 Ga0495681_0000824 3300047470 Bacteria 23910
187 Ga0495686_0006292 3300047472 Bacteria 9129
188 Ga0495626_0000076 3300048091 Bacteria 131125
189 Ga0495626_0000170 3300048091 Bacteria 80445
190 Ga0495626_0001478 3300048091 Bacteria 18552
191 Ga0496102_0000156 3300048905 Bacteria 92538
192 Ga0496102_0000210 3300048905 Bacteria 78438
193 Ga0496110_0000022 3300048913 Bacteria 76181
194 Ga0496114_0004891 3300048917 Bacteria 10434
195 Ga0496117_0000011 3300048920 Bacteria 610930
196 Ga0496117_0000854 3300048920 Bacteria 47114
197 Ga0496118_0000010 3300048921 Bacteria 610930
198 Ga0496119_0000069 3300048922 Bacteria 155265
199 Ga0496120_0000884 3300048923 Bacteria 42219
200 Ga0496121_0009487 3300048924 Bacteria 11172
201 Ga0496121_0019688 3300048924 Bacteria 6733
202 Ga0496122_0005549 3300048925 Bacteria 14949
203 Ga0496124_0000151 3300048927 Bacteria 142761
204 Ga0496125_0000532 3300048928 Bacteria 65618
205 Ga0496125_0012472 3300048928 Bacteria 8433
206 Ga0496126_0000913 3300048929 Bacteria 51086
207 Ga0495678_000745 3300049459 Bacteria 29532
208 nmdc:mga03683_1957_c1 3300050489 Bacteria 6297
209 nmdc:mga05p37_180128_c1 3300050507 Bacteria 2571
210 Ga0495601_0025794 3300053077 Bacteria 3626
211 Ga0500595_002793 3300053119 Bacteria 8415
212 Ga0500574_000379 3300053141 Bacteria 5550
213 2644030414 2643221603 Bacteria 6147767
214 2525558488 2524614729 Bacteria 3091755
215 2630650470 2627854209 Bacteria 3093011
216 2643800335 2643221556 Bacteria 7251154
217 2644471885 2643221684 Bacteria 7145183
218 2644530083 2643221695 Bacteria 3441323
219 2857549722 2857547612 Bacteria 6179999
220 2883293951 2883291878 Bacteria 5894118
221 2883357511 2883354860 Bacteria 5865246
222 2885082300 2885080285 Bacteria 6355622
223 2919480892 2919476304 Bacteria 5888696
224 2919516034 2919513703 Bacteria 3844312
225 2919677847 2919675420 Bacteria 3969095
226 8047675203 8047673197 Bacteria 7395230
227 JGI25162J39368_1000001
228 JGI25152J39213_1000060
229 JGI25159J45721_1001855
230 JGI25165J46597_1000001
231 JGI25153J46596_10004854
232 Ga0055538_1000001
233 Ga0055539_1000001
234 Ga0055533_1000003
235 Ga0055525_1000003
236 Ga0055525_1000026
237 Ga0055535_1000702
238 Ga0055529_1000340
239 Ga0055526_1013226
240 Ga0055524_1005246
241 Ga0055524_1005459
242 Ga0055541_1000001
243 Ga0070682_100009474
244 Ga0070662_100003230
245 Ga0081538_10002827
246 Ga0075362_10005483
247 Ga0105250_10000010
248 Ga0114129_10138612
249 Ga0157371_10000184
250 Ga0157375_10117224
251 Ga0182008_10001405
252 Ga0157379_10001470
253 Ga0182006_1000004
254 Ga0182006_1011315
255 Ga0182007_10000017
256 Ga0182007_10000118
257 Ga0182007_10003779
258 Ga0182005_1000030
259 Ga0182005_1000158
260 Ga0182005_1001582
261 Ga0213872_10000008
262 Ga0213872_10000248
263 Ga0213872_10001017
264 Ga0213875_10002653
265 Ga0209436_100863
266 Ga0209784_100004
267 Ga0209566_100004
268 Ga0209674_100006
269 Ga0209563_100005
270 Ga0209563_100009
271 Ga0209437_100004
272 Ga0209258_100060
273 Ga0207425_1000017
274 Ga0207425_1000331
275 Ga0209677_100005
276 Ga0209148_1000203
277 Ga0209759_1000663
278 Ga0209129_1000039
279 Ga0209233_1000005
280 Ga0209455_1000093
281 Ga0209130_1005857
282 Ga0209130_1005862
283 Ga0209758_1000192
284 Ga0209050_1000168
285 Ga0209256_1000207
286 Ga0209256_1001310
287 Ga0209257_1000806
288 Ga0207696_1000133
289 Ga0207706_10008572
290 Ga0207678_10000473
291 Ga0265760_10000954
292 Ga0265328_10011172
293 Ga0265328_10025920
294 Ga0265331_10000161
295 Ga0265327_10000043
296 Ga0307513_10018754
297 Ga0316579_10013424
298 Ga0316579_10034496
299 Ga0316576_10003376
300 Ga0316576_10048475
301 Ga0307516_10000202
302 Ga0316577_10039025
303 Ga0307413_10005158
304 Ga0307410_10017031
305 Ga0307407_10001896
306 Ga0316583_10003159
307 Ga0316583_10012471
308 Ga0316580_10006332
309 Ga0316580_10011739
310 Ga0316592_1000379
311 Ga0316592_1001131
312 Ga0316596_1004146
313 Ga0316574_0039453
314 Ga0316582_0009748
315 Ga0395899_0002457
316 Ga0395898_0004228
317 Ga0395905_0020727
318 Ga0436364_0353649
319 Ga0395901_0093747
320 Ga0395901_0110526
321 Ga0400483_156636
322 Ga0400487_41006
323 Ga0436360_0563299
324 Ga0436361_0041904
325 Ga0436361_0048162
326 Ga0436361_0182416
327 Ga0436361_0318385
328 Ga0436361_0784532
329 Ga0436361_1063608
330 Ga0466969_0000002
331 Ga0466969_0018429
332 Ga0466972_0000088
333 Ga0466972_0003572
334 Ga0466966_0043688
335 Ga0466961_0005212
336 Ga0466963_0016379
337 Ga0466964_0003737
338 Ga0453684_0050082
339 Ga0466957_0019707
340 Ga0466959_0000793
341 Ga0466959_0016106
342 Ga0466958_0000434
343 Ga0495617_000026
344 Ga0495627_000038
345 Ga0495627_000043
346 Ga0495590_0007131
347 Ga0495651_0004636
348 Ga0495653_0019617
349 Ga0495650_0000048
350 Ga0495605_0000113
351 Ga0495605_0000186
352 Ga0495584_0000252
353 Ga0495584_0004192
354 Ga0495585_0000672
355 Ga0495585_0012294
356 Ga0495585_0014329
357 Ga0495585_0025018
358 Ga0495607_0000727
359 Ga0495607_0001791
360 Ga0495607_0006162
361 Ga0495583_0000203
362 Ga0495583_0001150
363 Ga0495583_0018153
364 Ga0495606_0002601
365 Ga0495608_0039188
366 Ga0495616_0000048
367 Ga0495616_0011660
368 Ga0495628_0000707
369 Ga0495631_0002923
370 Ga0495632_0000152
371 Ga0495643_0000206
372 Ga0495643_0006368
373 Ga0495643_0008875
374 Ga0495643_0023022
375 Ga0495642_0001129
376 Ga0495642_0002074
377 Ga0495654_0007004
378 Ga0495609_0000022
379 Ga0495609_0001440
380 Ga0495621_0005955
381 Ga0495597_0000771
382 Ga0495597_0000806
383 Ga0495597_0004134
384 Ga0495633_0000253
385 Ga0495668_0000131
386 Ga0495668_0000434
387 Ga0495661_0000492
388 Ga0495661_0019212
389 Ga0495661_0025847
390 Ga0495661_0030043
391 Ga0495588_0010249
392 Ga0495669_0001964
393 Ga0495671_0000426
394 Ga0495649_0026160
395 Ga0495589_0000017
396 Ga0495589_0000508
397 Ga0495589_0005660
398 Ga0495660_0000080
399 Ga0495660_0000162
400 Ga0495660_0000177
401 Ga0495672_0000167
402 Ga0495672_0000581
403 Ga0495672_0016990
404 Ga0495683_0000098
405 Ga0495683_0024559
406 Ga0495687_000140
407 Ga0495687_000175
408 Ga0495687_001161
409 Ga0495687_003548
410 Ga0495677_0000002
411 Ga0495677_0000530
412 Ga0495681_0000824
413 Ga0495686_0006292
414 Ga0495626_0000076
415 Ga0495626_0000170
416 Ga0495626_0001478
417 Ga0496102_0000156
418 Ga0496102_0000210
419 Ga0496110_0000022
420 Ga0496114_0004891
421 Ga0496117_0000011
422 Ga0496117_0000854
423 Ga0496118_0000010
424 Ga0496119_0000069
425 Ga0496120_0000884
426 Ga0496121_0009487
427 Ga0496121_0019688
428 Ga0496122_0005549
429 Ga0496124_0000151
430 Ga0496125_0000532
431 Ga0496125_0012472
432 Ga0496126_0000913
433 Ga0495678_000745
434 nmdc:mga03683_1957_c1
435 nmdc:mga05p37_180128_c1
436 Ga0495601_0025794
437 Ga0500595_002793
438 Ga0500574_000379
439 2644030414
440 2525558488
441 2630650470
442 2643800335
443 2644471885
444 2644530083
445 2857549722
446 2883293951
447 2883357511
448 2885082300
449 2919480892
450 2919516034
451 2919677847
452 8047675203

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03030

H_PPase

Inorganic H+ pyrophosphatase

9

666

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2aiz-assembly1.cif.gz_P solution structure of peptidoglycan associated lipoprotein from haemophilus influenza bound to udp-n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine 0.791 639 713
5n2c-assembly1.cif.gz_A crystal structure of the peptidoglycan-associated lipoprotein from burkholderia cenocepacia 0.7852 639 715
2n48-assembly1.cif.gz_A ec-nmr structure of escherichia coli yiad determined by combining evolutionary couplings (ec) and sparse nmr data. northeast structural genomics consortium target er553 0.7841 634 715
5u1h-assembly3.cif.gz_C crystal structure of the c-terminal peptidoglycan binding domain of oprf (pa1777) from pseudomonas aeruginosa 0.7756 633 714
2hqs-assembly1.cif.gz_H crystal structure of tolb/pal complex 0.7745 635 713
ID Description Score Start End Superfamily
af_P0A910_199_343_3.30.1330.60 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.7773 633 693 3.30.1330.60
5wtpB00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.7535 639 715 3.30.1330.60
6jfwA00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.7083 631 715 3.30.1330.60
2lcaA00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.6767 625 715 3.30.1330.60
2w8bC00 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain 0.6408 625 713 3.30.1330.60
ID Description Score Start End GO Terms
AF-X1QWN9-F1-model_v4 Sodium-translocating pyrophosphatase 0.949 5 181 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-X1U8P2-F1-model_v4 H(+)-exporting diphosphatase 0.932 217 457 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-X1QWN9-F1-model_v4 Sodium-translocating pyrophosphatase 0.9276 5 181 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-A0A7C7H9I8-F1-model_v4 Sodium-translocating pyrophosphatase (EC 3.6.1.1) 0.9273 1 457 GO:0004427
GO:0009678
GO:0012505
GO:0016020
AF-A0A7W1PZN8-F1-model_v4 Sodium/proton-translocating pyrophosphatase 0.9243 5 178 GO:0004427
GO:0009678
GO:0012505
GO:0016020

Map