F339442

General Info

Members Datasets Scaffolds Average Seq Length
227 142 454 892

Family's Representative Sequence

Representative Sequence 3300000546|LJNas_1000529|LJNas_10005293
Length 909
Sequence MQSGASHGKTQFRQASGSEAMSTKEAVPVQTSFSEEMAEWIEAFDEVVVAEGAEHSAELLTALRRRAREAGINTTGELITPYLNTIPKHEEVPYPGNRDLERRVESLIRWNAMAMVHRQNKKDAGIGGHISTYSSLATLLEVGFNHFFHANHGDQPGDFIYFQGHASPGVYARAYLEGRFEDEQVLNFRHELRGKPGLSSYPHPWLMPNFWRFPTVSMGIGPLNALYQARFMRYLENRSLIPKTDRKVWAFVGDGETDEVDTLGAISMATREKLDNLIFVVNCNLQRLDGPVRGNKRIIDELEGMFRGAGWNVIKVVWGSDWDKLFERDHTGLLLKRMEECVDGDYQSFKAKGGAYLRQEFFGKYPELLELVRDMSDDELARLHRGGHDPVKIYNAYKRATEHKGGPTVILAKTVKGYGLGSTQARNASHQEKKLTDDALTAFVKRFDIPVPEEAAKEALPYRPAKDAPEIAYMLERRKELGGFMPKRETPKLDFKAPEPDSFAEWTAGSKGRAVSTTMGFVSILRHLMKDEKFGKLIVPIVPDEGRTFGLESAIRQVGIYASEGQKYKPHDVDMLLYYREEADGQILEEGITEAGSMASFTAAGTAYSNYRLPAIPFYMYYSMFGFQRIGDMAWAFADSRGKGFLMGGTAGRTTMLGEGLQHQDGHSIVLASTVPTCATYDPAFVYELATIVQDGLRRMYEEGEDLFYYITMYNEDYAMPEMPEGSREGILRGIYRLRPAAKGKALAQLFGSGPILNEALRAQQILAEKYNVATDVWSVTSYNELRRDALAVERWNRLHPSQQAKQPYILGALGSAPGPIIAASDYMKAVPDQLAPWLLDRLVSLGTDGFGRSDNREHLRRHFEVSAESIVAATLSRLAREGKFDARKAEAAFAELGVDPERGDPARA

Samples

Sample ID Description Type Environment
1 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
38 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
66 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
75 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
86 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
97 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
98 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
101 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
102 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
103 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
140 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
141 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
142 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 3.52
Rhizosphere 86.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1000529 3300000546 Bacteria 6644
2 Ga0070683_100000002 3300005329 Bacteria 427530
3 Ga0070683_100001696 3300005329 Bacteria 17124
4 Ga0070683_100015269 3300005329 Bacteria 6743
5 Ga0070691_10000088 3300005341 Bacteria 26073
6 Ga0070661_100008563 3300005344 Bacteria 7076
7 Ga0070659_100003160 3300005366 Bacteria 11736
8 Ga0070659_100005259 3300005366 Bacteria 9287
9 Ga0070714_100018717 3300005435 Bacteria 5633
10 Ga0070714_100044113 3300005435 Bacteria 3774
11 Ga0070713_100004217 3300005436 Bacteria 9601
12 Ga0070711_100008062 3300005439 Bacteria 6432
13 Ga0070679_100001383 3300005530 Bacteria 21358
14 Ga0070684_100000043 3300005535 Bacteria 87671
15 Ga0070684_100015036 3300005535 Bacteria 6288
16 Ga0068853_100000014 3300005539 Bacteria 227023
17 Ga0068853_100006826 3300005539 Bacteria 9101
18 Ga0068853_100016051 3300005539 Bacteria 6158
19 Ga0070696_100002204 3300005546 Bacteria 12840
20 Ga0070665_100062627 3300005548 Bacteria 3730
21 Ga0068855_100002025 3300005563 Bacteria 25127
22 Ga0068855_100002308 3300005563 Bacteria 23581
23 Ga0068855_100011944 3300005563 Bacteria 10500
24 Ga0068857_100000850 3300005577 Bacteria 22895
25 Ga0068854_100000014 3300005578 Bacteria 163231
26 Ga0068863_100005953 3300005841 Bacteria 11963
27 Ga0081455_10002526 3300005937 Bacteria 21738
28 Ga0081539_10001889 3300005985 Bacteria 32520
29 Ga0070717_10016362 3300006028 Bacteria 5750
30 Ga0075430_100037014 3300006846 Bacteria 4136
31 Ga0075431_100036277 3300006847 Bacteria 5078
32 Ga0105240_10000002 3300009093 Bacteria 1924170
33 Ga0105240_10001735 3300009093 Bacteria 36805
34 Ga0105240_10002993 3300009093 Bacteria 26585
35 Ga0105240_10003032 3300009093 Bacteria 26423
36 Ga0105240_10016168 3300009093 Bacteria 10112
37 Ga0105245_10000645 3300009098 Bacteria 31623
38 Ga0105242_10049924 3300009176 Bacteria 3406
39 Ga0105248_10004931 3300009177 Bacteria 14744
40 Ga0105238_10024076 3300009551 Bacteria 6207
41 Ga0157370_10032948 3300013104 Bacteria 5054
42 Ga0157369_10001410 3300013105 Bacteria 29531
43 Ga0157369_10002955 3300013105 Bacteria 20325
44 Ga0157369_10003152 3300013105 Bacteria 19689
45 Ga0157369_10013393 3300013105 Bacteria 9275
46 Ga0157369_10017020 3300013105 Bacteria 8169
47 Ga0157369_10066835 3300013105 Bacteria 3867
48 Ga0157378_10045799 3300013297 Bacteria 3888
49 Ga0157378_10080833 3300013297 Bacteria 2937
50 Ga0163162_10002383 3300013306 Bacteria 17664
51 Ga0157372_10000671 3300013307 Bacteria 37684
52 Ga0157372_10009281 3300013307 Bacteria 10463
53 Ga0157372_10032831 3300013307 Bacteria 5695
54 Ga0163163_10035177 3300014325 Bacteria 4858
55 Ga0157376_10044800 3300014969 Bacteria 3639
56 Ga0213872_10000164 3300021361 Bacteria 60317
57 Ga0213872_10000934 3300021361 Bacteria 20565
58 Ga0213876_10010583 3300021384 Bacteria 4943
59 Ga0213875_10000006 3300021388 Bacteria 579005
60 Ga0213875_10000013 3300021388 Bacteria 305595
61 Ga0213875_10001438 3300021388 Bacteria 15431
62 Ga0213875_10009232 3300021388 Bacteria 5004
63 Ga0213875_10011796 3300021388 Bacteria 4336
64 Ga0213871_10000649 3300021441 Bacteria 4971
65 Ga0207705_10000013 3300025909 Bacteria 451680
66 Ga0207705_10004727 3300025909 Bacteria 10261
67 Ga0207695_10000002 3300025913 Bacteria 2188391
68 Ga0207695_10000790 3300025913 Bacteria 59450
69 Ga0207695_10005509 3300025913 Bacteria 16757
70 Ga0207695_10008791 3300025913 Bacteria 12591
71 Ga0207671_10003882 3300025914 Bacteria 14602
72 Ga0207693_10015064 3300025915 Bacteria 6207
73 Ga0207663_10004477 3300025916 Bacteria 6952
74 Ga0207657_10003328 3300025919 Bacteria 17191
75 Ga0207657_10010569 3300025919 Bacteria 9204
76 Ga0207649_10012515 3300025920 Bacteria 4710
77 Ga0207652_10002282 3300025921 Bacteria 16272
78 Ga0207652_10007665 3300025921 Bacteria 8680
79 Ga0207652_10023612 3300025921 Bacteria 5096
80 Ga0207652_10046905 3300025921 Bacteria 3689
81 Ga0207694_10000521 3300025924 Bacteria 34747
82 Ga0207694_10024487 3300025924 Bacteria 4585
83 Ga0207687_10004241 3300025927 Bacteria 9584
84 Ga0207700_10004716 3300025928 Bacteria 8083
85 Ga0207664_10001415 3300025929 Bacteria 15786
86 Ga0207644_10000469 3300025931 Bacteria 26007
87 Ga0207690_10009386 3300025932 Bacteria 5810
88 Ga0207665_10013773 3300025939 Bacteria 5319
89 Ga0207711_10009510 3300025941 Bacteria 8108
90 Ga0207661_10000003 3300025944 Bacteria 611941
91 Ga0207661_10001770 3300025944 Bacteria 14768
92 Ga0207661_10009279 3300025944 Bacteria 7052
93 Ga0207661_10021219 3300025944 Bacteria 4867
94 Ga0207667_10000563 3300025949 Bacteria 48455
95 Ga0207667_10016035 3300025949 Bacteria 8483
96 Ga0207667_10047733 3300025949 Bacteria 4531
97 Ga0207667_10068882 3300025949 Bacteria 3683
98 Ga0207667_10080939 3300025949 Bacteria 3364
99 Ga0207712_10020480 3300025961 Bacteria 4331
100 Ga0207640_10000010 3300025981 Bacteria 275745
101 Ga0207639_10000247 3300026041 Bacteria 40068
102 Ga0207639_10002066 3300026041 Bacteria 13537
103 Ga0207678_10013457 3300026067 Bacteria 7182
104 Ga0207676_10013521 3300026095 Bacteria 5860
105 Ga0207674_10001311 3300026116 Bacteria 32478
106 Ga0207674_10001574 3300026116 Bacteria 29383
107 Ga0207674_10001649 3300026116 Bacteria 28706
108 Ga0207428_10040367 3300027907 Bacteria 3786
109 Ga0268266_10003415 3300028379 Bacteria 15899
110 Ga0268266_10024869 3300028379 Bacteria 5095
111 Ga0265323_10000561 3300028653 Bacteria 20564
112 Ga0265330_10023240 3300031235 Bacteria 2817
113 Ga0265325_10001076 3300031241 Bacteria 19663
114 Ga0265340_10005441 3300031247 Bacteria 7072
115 Ga0265331_10006905 3300031250 Bacteria 6630
116 Ga0265316_10008184 3300031344 Bacteria 9729
117 Ga0265316_10010830 3300031344 Bacteria 8285
118 Ga0265316_10031410 3300031344 Bacteria 4342
119 Ga0265313_10001799 3300031595 Bacteria 19597
120 Ga0265314_10001307 3300031711 Bacteria 28236
121 Ga0265314_10013017 3300031711 Bacteria 6752
122 Ga0265342_10020346 3300031712 Bacteria 4260
123 Ga0265342_10025882 3300031712 Bacteria 3683
124 Ga0307510_10077934 3300033180 Bacteria 3246
125 Ga0373945_0004361 3300035116 Bacteria 4491
126 Ga0373954_0006074 3300035118 Bacteria 5254
127 Ga0373943_0006294 3300035170 Bacteria 5328
128 Ga0373927_0000650 3300035695 Bacteria 26321
129 Ga0373927_0004528 3300035695 Bacteria 9712
130 Ga0373927_0017034 3300035695 Bacteria 4787
131 Ga0373947_0001542 3300035725 Bacteria 14138
132 Ga0373947_0025649 3300035725 Bacteria 3438
133 Ga0373937_0000235 3300036401 Bacteria 54045
134 Ga0373937_0005455 3300036401 Bacteria 10891
135 Ga0373937_0034690 3300036401 Bacteria 4589
136 Ga0373937_0045357 3300036401 Bacteria 4017
137 Ga0373937_0049527 3300036401 Bacteria 3847
138 Ga0373925_0000106 3300037068 Bacteria 89944
139 Ga0373925_0027300 3300037068 Bacteria 4180
140 Ga0436364_0214612 3300037853 Bacteria 30361
141 Ga0436364_0478514 3300037853 Bacteria 578677
142 Ga0436364_0679622 3300037853 Bacteria 4072
143 Ga0436364_0778509 3300037853 Bacteria 11709
144 Ga0436364_0794765 3300037853 Bacteria 162685
145 Ga0436364_0925915 3300037853 Bacteria 11093
146 Ga0436364_1495886 3300037853 Bacteria 7722
147 Ga0436365_0543955 3300039437 Bacteria 3402
148 Ga0436361_0053210 3300039447 Bacteria 16595
149 Ga0436361_0167314 3300039447 Bacteria 59578
150 Ga0436361_0920691 3300039447 Bacteria 12392
151 Ga0436362_1012819 3300039453 Bacteria 8693
152 Ga0466963_0000343 3300044694 Bacteria 21111
153 Ga0466963_0036989 3300044694 Bacteria 3186
154 Ga0466957_0000149 3300044842 Bacteria 30203
155 Ga0451576_0079499 3300045051 Bacteria 3412
156 Ga0466967_0000240 3300045976 Bacteria 23941
157 Ga0495592_0011456 3300046454 Bacteria 6710
158 Ga0495651_0042657 3300046462 Bacteria 3521
159 Ga0495650_0000009 3300046471 Bacteria 653845
160 Ga0495580_0001028 3300046472 Bacteria 24494
161 Ga0495580_0007175 3300046472 Bacteria 8970
162 Ga0495580_0036659 3300046472 Bacteria 3520
163 Ga0495662_0010432 3300046476 Bacteria 4549
164 Ga0495664_0001299 3300046477 Bacteria 13084
165 Ga0495584_0001888 3300046491 Bacteria 12078
166 Ga0495584_0010172 3300046491 Bacteria 4830
167 Ga0495610_0007800 3300046512 Bacteria 7054
168 Ga0495616_0001282 3300046513 Bacteria 17666
169 Ga0495628_0004454 3300046516 Bacteria 12426
170 Ga0495637_0000167 3300046520 Bacteria 50653
171 Ga0495644_0000533 3300046523 Bacteria 16159
172 Ga0495586_0024278 3300046535 Bacteria 3240
173 Ga0495587_0001900 3300046536 Bacteria 13915
174 Ga0495645_0007463 3300046543 Bacteria 7611
175 Ga0495645_0010453 3300046543 Bacteria 6506
176 Ga0495667_0045922 3300046559 Bacteria 2889
177 Ga0495668_0023834 3300046616 Bacteria 3485
178 Ga0495625_0000407 3300046660 Bacteria 65324
179 Ga0495625_0017399 3300046660 Bacteria 5629
180 Ga0495625_0019176 3300046660 Bacteria 5316
181 Ga0495599_0010878 3300046678 Bacteria 5577
182 Ga0495669_0013562 3300046684 Bacteria 3475
183 Ga0495604_0045933 3300047317 Bacteria 3407
184 Ga0495674_0016523 3300047319 Bacteria 6886
185 Ga0495674_0064677 3300047319 Bacteria 3179
186 Ga0495684_0002784 3300047471 Bacteria 13802
187 Ga0495684_0011672 3300047471 Bacteria 6783
188 Ga0495686_0000018 3300047472 Bacteria 434962
189 Ga0495686_0003107 3300047472 Bacteria 14675
190 Ga0495686_0012178 3300047472 Bacteria 6029
191 Ga0495602_0013569 3300048088 Bacteria 8320
192 Ga0496104_0000032 3300048907 Bacteria 191998
193 Ga0496104_0005663 3300048907 Bacteria 10941
194 Ga0496105_0025108 3300048908 Bacteria 4847
195 Ga0496109_0000067 3300048912 Bacteria 110821
196 Ga0496112_0018923 3300048915 Bacteria 6489
197 Ga0496112_0026718 3300048915 Bacteria 5561
198 Ga0496113_0007781 3300048916 Bacteria 6923
199 Ga0496115_0008403 3300048918 Bacteria 7640
200 Ga0496126_0000074 3300048929 Bacteria 235643
201 Ga0496126_0000260 3300048929 Bacteria 112573
202 Ga0496126_0000853 3300048929 Bacteria 53738
203 Ga0496126_0001522 3300048929 Bacteria 35736
204 Ga0496126_0011063 3300048929 Bacteria 9379
205 Ga0495682_0007679 3300049460 Bacteria 4279
206 Ga0501032_0000371 3300049569 Bacteria 37297
207 Ga0501033_0005538 3300049570 Bacteria 9988
208 Ga0501034_0040199 3300049571 Bacteria 4735
209 Ga0501036_0001645 3300049572 Bacteria 17306
210 Ga0501037_0006600 3300049573 Bacteria 8483
211 Ga0501038_0000914 3300049574 Bacteria 26195
212 Ga0501043_0001040 3300049579 Bacteria 24385
213 Ga0501046_0001521 3300049580 Bacteria 22117
214 Ga0501047_0001432 3300049581 Bacteria 23421
215 Ga0501047_0064530 3300049581 Bacteria 3532
216 Ga0501073_0004924 3300049589 Bacteria 10029
217 Ga0501080_0029575 3300049742 Bacteria 5101
218 Ga0501035_0003170 3300049822 Bacteria 15786
219 nmdc:mga08y16_5100_c1 3300050511 Bacteria 13722
220 nmdc:mga08x19_2038_c1 3300050514 Bacteria 12385
221 nmdc:mga08x19_4373_c1 3300050514 Bacteria 8380
222 nmdc:mga0a205_40900_c1 3300050515 Bacteria 4464
223 Ga0495601_0019137 3300053077 Bacteria 4173
224 Ga0500651_0000002 3300053093 Bacteria 476609
225 Ga0500555_006422 3300053103 Bacteria 3338
226 Ga0500595_000032 3300053119 Bacteria 111447
227 2884216931 2884215851 Bacteria 4554841
228 LJNas_1000529
229 Ga0070683_100000002
230 Ga0070683_100001696
231 Ga0070683_100015269
232 Ga0070691_10000088
233 Ga0070661_100008563
234 Ga0070659_100003160
235 Ga0070659_100005259
236 Ga0070714_100018717
237 Ga0070714_100044113
238 Ga0070713_100004217
239 Ga0070711_100008062
240 Ga0070679_100001383
241 Ga0070684_100000043
242 Ga0070684_100015036
243 Ga0068853_100000014
244 Ga0068853_100006826
245 Ga0068853_100016051
246 Ga0070696_100002204
247 Ga0070665_100062627
248 Ga0068855_100002025
249 Ga0068855_100002308
250 Ga0068855_100011944
251 Ga0068857_100000850
252 Ga0068854_100000014
253 Ga0068863_100005953
254 Ga0081455_10002526
255 Ga0081539_10001889
256 Ga0070717_10016362
257 Ga0075430_100037014
258 Ga0075431_100036277
259 Ga0105240_10000002
260 Ga0105240_10001735
261 Ga0105240_10002993
262 Ga0105240_10003032
263 Ga0105240_10016168
264 Ga0105245_10000645
265 Ga0105242_10049924
266 Ga0105248_10004931
267 Ga0105238_10024076
268 Ga0157370_10032948
269 Ga0157369_10001410
270 Ga0157369_10002955
271 Ga0157369_10003152
272 Ga0157369_10013393
273 Ga0157369_10017020
274 Ga0157369_10066835
275 Ga0157378_10045799
276 Ga0157378_10080833
277 Ga0163162_10002383
278 Ga0157372_10000671
279 Ga0157372_10009281
280 Ga0157372_10032831
281 Ga0163163_10035177
282 Ga0157376_10044800
283 Ga0213872_10000164
284 Ga0213872_10000934
285 Ga0213876_10010583
286 Ga0213875_10000006
287 Ga0213875_10000013
288 Ga0213875_10001438
289 Ga0213875_10009232
290 Ga0213875_10011796
291 Ga0213871_10000649
292 Ga0207705_10000013
293 Ga0207705_10004727
294 Ga0207695_10000002
295 Ga0207695_10000790
296 Ga0207695_10005509
297 Ga0207695_10008791
298 Ga0207671_10003882
299 Ga0207693_10015064
300 Ga0207663_10004477
301 Ga0207657_10003328
302 Ga0207657_10010569
303 Ga0207649_10012515
304 Ga0207652_10002282
305 Ga0207652_10007665
306 Ga0207652_10023612
307 Ga0207652_10046905
308 Ga0207694_10000521
309 Ga0207694_10024487
310 Ga0207687_10004241
311 Ga0207700_10004716
312 Ga0207664_10001415
313 Ga0207644_10000469
314 Ga0207690_10009386
315 Ga0207665_10013773
316 Ga0207711_10009510
317 Ga0207661_10000003
318 Ga0207661_10001770
319 Ga0207661_10009279
320 Ga0207661_10021219
321 Ga0207667_10000563
322 Ga0207667_10016035
323 Ga0207667_10047733
324 Ga0207667_10068882
325 Ga0207667_10080939
326 Ga0207712_10020480
327 Ga0207640_10000010
328 Ga0207639_10000247
329 Ga0207639_10002066
330 Ga0207678_10013457
331 Ga0207676_10013521
332 Ga0207674_10001311
333 Ga0207674_10001574
334 Ga0207674_10001649
335 Ga0207428_10040367
336 Ga0268266_10003415
337 Ga0268266_10024869
338 Ga0265323_10000561
339 Ga0265330_10023240
340 Ga0265325_10001076
341 Ga0265340_10005441
342 Ga0265331_10006905
343 Ga0265316_10008184
344 Ga0265316_10010830
345 Ga0265316_10031410
346 Ga0265313_10001799
347 Ga0265314_10001307
348 Ga0265314_10013017
349 Ga0265342_10020346
350 Ga0265342_10025882
351 Ga0307510_10077934
352 Ga0373945_0004361
353 Ga0373954_0006074
354 Ga0373943_0006294
355 Ga0373927_0000650
356 Ga0373927_0004528
357 Ga0373927_0017034
358 Ga0373947_0001542
359 Ga0373947_0025649
360 Ga0373937_0000235
361 Ga0373937_0005455
362 Ga0373937_0034690
363 Ga0373937_0045357
364 Ga0373937_0049527
365 Ga0373925_0000106
366 Ga0373925_0027300
367 Ga0436364_0214612
368 Ga0436364_0478514
369 Ga0436364_0679622
370 Ga0436364_0778509
371 Ga0436364_0794765
372 Ga0436364_0925915
373 Ga0436364_1495886
374 Ga0436365_0543955
375 Ga0436361_0053210
376 Ga0436361_0167314
377 Ga0436361_0920691
378 Ga0436362_1012819
379 Ga0466963_0000343
380 Ga0466963_0036989
381 Ga0466957_0000149
382 Ga0451576_0079499
383 Ga0466967_0000240
384 Ga0495592_0011456
385 Ga0495651_0042657
386 Ga0495650_0000009
387 Ga0495580_0001028
388 Ga0495580_0007175
389 Ga0495580_0036659
390 Ga0495662_0010432
391 Ga0495664_0001299
392 Ga0495584_0001888
393 Ga0495584_0010172
394 Ga0495610_0007800
395 Ga0495616_0001282
396 Ga0495628_0004454
397 Ga0495637_0000167
398 Ga0495644_0000533
399 Ga0495586_0024278
400 Ga0495587_0001900
401 Ga0495645_0007463
402 Ga0495645_0010453
403 Ga0495667_0045922
404 Ga0495668_0023834
405 Ga0495625_0000407
406 Ga0495625_0017399
407 Ga0495625_0019176
408 Ga0495599_0010878
409 Ga0495669_0013562
410 Ga0495604_0045933
411 Ga0495674_0016523
412 Ga0495674_0064677
413 Ga0495684_0002784
414 Ga0495684_0011672
415 Ga0495686_0000018
416 Ga0495686_0003107
417 Ga0495686_0012178
418 Ga0495602_0013569
419 Ga0496104_0000032
420 Ga0496104_0005663
421 Ga0496105_0025108
422 Ga0496109_0000067
423 Ga0496112_0018923
424 Ga0496112_0026718
425 Ga0496113_0007781
426 Ga0496115_0008403
427 Ga0496126_0000074
428 Ga0496126_0000260
429 Ga0496126_0000853
430 Ga0496126_0001522
431 Ga0496126_0011063
432 Ga0495682_0007679
433 Ga0501032_0000371
434 Ga0501033_0005538
435 Ga0501034_0040199
436 Ga0501036_0001645
437 Ga0501037_0006600
438 Ga0501038_0000914
439 Ga0501043_0001040
440 Ga0501046_0001521
441 Ga0501047_0001432
442 Ga0501047_0064530
443 Ga0501073_0004924
444 Ga0501080_0029575
445 Ga0501035_0003170
446 nmdc:mga08y16_5100_c1
447 nmdc:mga08x19_2038_c1
448 nmdc:mga08x19_4373_c1
449 nmdc:mga0a205_40900_c1
450 Ga0495601_0019137
451 Ga0500651_0000002
452 Ga0500555_006422
453 Ga0500595_000032
454 2884216931

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17831

PDH_E1_M

Pyruvate dehydrogenase E1 component middle domain

489

721

0.97

PF22613

Transketolase_C_1

Transketolase-like TK C-terminal domain

734

867

0.97

PF00456

Transketolase_N

Transketolase, thiamine diphosphate binding domain

101

328

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qta-assembly1.cif.gz_A e. coli pyruvate dehydrogenase e1 component e401k mutant with thiamin diphosphate 0.9504 79 909
2qta-assembly1.cif.gz_A e. coli pyruvate dehydrogenase e1 component e401k mutant with thiamin diphosphate 0.9493 79 909
3lpl-assembly1.cif.gz_B e. coli pyruvate dehydrogenase complex e1 component e571a mutant 0.9491 79 909
3lpl-assembly1.cif.gz_B e. coli pyruvate dehydrogenase complex e1 component e571a mutant 0.9479 79 909
3lq4-assembly1.cif.gz_B e. coli pyruvate dehydrogenase complex e1 e235a mutant with high tdp concentration 0.9457 79 909
ID Description Score Start End Superfamily
1l8aB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9364 79 489 3.40.50.970
3lq2A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9261 724 909 3.40.50.920
1l8aB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9252 79 489 3.40.50.970
3lq2A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9213 724 909 3.40.50.920
af_P9WIS9_741_922_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9025 729 903 3.40.50.920
ID Description Score Start End GO Terms
AF-U7U8Z0-F1-model_v4 Uncharacterized protein 0.9834 676 826 GO:0003824
AF-A0A833NUB4-F1-model_v4 deleted 0.9716 681 821
AF-A0A357HFL5-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type 0.9672 732 838 GO:0003824
AF-A0A6B3IPL3-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type 0.9666 676 817 GO:0000287
GO:0003824
AF-A0A2V5N418-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type 0.9604 670 909 GO:0003824

Map