F339482
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 227 | 162 | 454 | 698 |
Family's Representative Sequence
| Representative Sequence | 3300003320|rootH2_10011539|rootH2_1001153916 |
| Length | 738 |
| Sequence | MVCLDCAEAAGGCPKAKHKMGYMKEITESMRRKTIARDISWLSFNSRVLQEAADPTVPLRERIRFLGIFSNNMDEFFRVRVATLRRMAEYSGAKSHINMHLEASPERILGEIQQRVLEQGDEFDAIWNGIRKEMEHENIYLVTEKELDSHQQQFIQNYFEEEVRTNTIPLMVESIPTFPYLRDKSLYLGVVLSRQDGSMKRKYAIVEIPSRVLGRFVLLPGSGKEEHRIILLEDIIRFNLRNIFAYFGYDTYDSWVFKVTRDAEIDIDNDVSTTLIQKIEKGLKNRRKGKPVRFVYDKEMDKGLLDYLIKRLNLSRKSGNLIPGGRIHNFRHFMDFPDVFPKQGQRKRPFTHPLLQKSPRVTDVVLEQDVMLHFPYHSFNPLIDMLREAAIDPNVTTIKITGYRLASNSKIINALINAVRNGKHVTVMLELRARFDEEANLEWKERLEDEGVKVLIGIPNMKVHAKICLIKKRINNFTIHYGFVSTGNLNEKTARVYGDHCLLTSDRGIMADVNRIFTYLENYKEGTGPLKACKHLIPCPTSLRRELVKMIARETKLAREKKPAAMTLKMNSLSDEDLIDKLYEAAKAGVRIQLIVRGIFCMFSENSKFLIPVKAISIIDEYLEHARVFIFHNGGNEKTYISSADWMVRNLDHRVEATCPILDERIARELREILDIQLSDNVKARWLDNELLNKYKRDHPEHKVRSQIEIYNYLYHKAMPEEVHTEPSAETSNHMAAG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 2 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 3 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 4 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 5 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 6 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 7 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 8 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 9 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 12 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 14 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 22 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 24 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 26 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 28 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 29 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 30 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 31 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 32 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 33 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 34 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 35 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 37 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 57 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 61 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 63 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 89 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 90 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 91 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 92 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 93 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 94 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 95 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 96 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 97 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 98 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 99 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 100 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 101 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 102 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 103 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 104 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 105 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 106 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 107 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 121 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 131 | 3300049703 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control | Metagenome | Rhizosphere |
| 132 | 3300049704 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control | Metagenome | Rhizosphere |
| 133 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 134 | 3300049708 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control | Metagenome | Rhizosphere |
| 135 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300050005 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought | Metagenome | Rhizosphere |
| 139 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 140 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 142 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 143 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 144 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 145 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 146 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 147 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 148 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 149 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 150 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 151 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 152 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 153 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 154 | 2818991444 | Filimonas endophytica 3197 | Isolate | Unclassified |
| 155 | 2818991460 | Chitinophaga polysaccharea 1209 | Isolate | Unclassified |
| 156 | 2883068021 | Chitinophaga rhizosphaerae T16R-86 | Isolate | Rhizosphere |
| 157 | 2884791551 | Chitinophaga oryzae 1310 | Isolate | Unclassified |
| 158 | 2929154850 | Filimonas sp. R-72421 Hybrid assembly | Isolate | Unclassified |
| 159 | 2929177148 | Chitinophaga sp. R-72269 Hybrid assembly | Isolate | Unclassified |
| 160 | 2929239360 | Chitinophaga sp. R-73072 Hybrid assembly | Isolate | Unclassified |
| 161 | 2945977869 | Chitinophaga sp. W2I13 | Isolate | Rhizosphere |
| 162 | 2946013367 | Chitinophaga sp. W3I9 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.59 |
| Metatranscriptomes | 0 |
| Isolates | 4.41 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 14.54 |
| Nodule | 0 |
| Rhizoplane | 0.44 |
| Rhizosphere | 77.09 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.64 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH2_10011539 | 3300003320 | Bacteria | 21730 |
| 2 | rootH2_10012629 | 3300003320 | Bacteria | 2754 |
| 3 | rootH2_10065832 | 3300003320 | Bacteria | 6186 |
| 4 | rootH1_10025049 | 3300003323 | Bacteria | 25922 |
| 5 | rootH1_10058899 | 3300003323 | Bacteria | 8268 |
| 6 | JGI25160J50197_1003268 | 3300003354 | Bacteria | 7299 |
| 7 | Ga0055535_1004375 | 3300003761 | Bacteria | 3457 |
| 8 | Ga0055526_1011107 | 3300003771 | Bacteria | 4104 |
| 9 | Ga0055528_1000123 | 3300003790 | Bacteria | 61846 |
| 10 | Ga0055530_10000315 | 3300003791 | Bacteria | 43745 |
| 11 | Ga0065165_1007232 | 3300005262 | Bacteria | 5526 |
| 12 | Ga0065704_10073329 | 3300005289 | Bacteria | 7299 |
| 13 | Ga0070683_100001327 | 3300005329 | Bacteria | 18835 |
| 14 | Ga0070683_100003759 | 3300005329 | Bacteria | 12389 |
| 15 | Ga0070683_100004547 | 3300005329 | Bacteria | 11449 |
| 16 | Ga0070690_100012872 | 3300005330 | Bacteria | 4929 |
| 17 | Ga0070690_100018004 | 3300005330 | Bacteria | 4260 |
| 18 | Ga0070670_100032153 | 3300005331 | Bacteria | 4519 |
| 19 | Ga0070670_100033790 | 3300005331 | Bacteria | 4404 |
| 20 | Ga0068869_100022659 | 3300005334 | Bacteria | 4331 |
| 21 | Ga0070680_100001311 | 3300005336 | Bacteria | 18023 |
| 22 | Ga0070682_100000176 | 3300005337 | Bacteria | 47755 |
| 23 | Ga0070689_100037753 | 3300005340 | Bacteria | 3694 |
| 24 | Ga0070691_10028974 | 3300005341 | Unclassified | 2589 |
| 25 | Ga0070661_100000537 | 3300005344 | Bacteria | 29079 |
| 26 | Ga0070661_100014985 | 3300005344 | Bacteria | 5469 |
| 27 | Ga0070674_100010276 | 3300005356 | Bacteria | 5650 |
| 28 | Ga0070662_100011000 | 3300005457 | Bacteria | 5963 |
| 29 | Ga0070662_100013881 | 3300005457 | Bacteria | 5366 |
| 30 | Ga0068867_100021098 | 3300005459 | Bacteria | 4646 |
| 31 | Ga0070684_100001858 | 3300005535 | Bacteria | 15463 |
| 32 | Ga0070684_100002677 | 3300005535 | Bacteria | 13150 |
| 33 | Ga0068853_100025725 | 3300005539 | Bacteria | 4940 |
| 34 | Ga0068853_100028758 | 3300005539 | Bacteria | 4678 |
| 35 | Ga0070665_100045120 | 3300005548 | Unclassified | 4426 |
| 36 | Ga0068855_100011913 | 3300005563 | Bacteria | 10513 |
| 37 | Ga0070664_100010404 | 3300005564 | Bacteria | 7545 |
| 38 | Ga0068857_100001511 | 3300005577 | Bacteria | 18554 |
| 39 | Ga0068857_100014273 | 3300005577 | Bacteria | 6921 |
| 40 | Ga0068854_100020139 | 3300005578 | Bacteria | 4508 |
| 41 | Ga0068856_100026845 | 3300005614 | Bacteria | 5616 |
| 42 | Ga0068856_100039159 | 3300005614 | Bacteria | 4654 |
| 43 | Ga0068852_100000740 | 3300005616 | Bacteria | 21442 |
| 44 | Ga0068852_100075332 | 3300005616 | Bacteria | 2976 |
| 45 | Ga0068859_100001623 | 3300005617 | Bacteria | 22983 |
| 46 | Ga0068859_100086430 | 3300005617 | Bacteria | 3183 |
| 47 | Ga0068860_100004912 | 3300005843 | Bacteria | 13623 |
| 48 | Ga0068860_100016022 | 3300005843 | Bacteria | 7313 |
| 49 | Ga0081539_10001245 | 3300005985 | Bacteria | 45262 |
| 50 | Ga0081539_10024650 | 3300005985 | Bacteria | 3896 |
| 51 | Ga0075366_10014415 | 3300006195 | Bacteria | 4515 |
| 52 | Ga0097621_100003131 | 3300006237 | Bacteria | 11350 |
| 53 | Ga0097621_100005125 | 3300006237 | Bacteria | 9204 |
| 54 | Ga0068871_100012018 | 3300006358 | Bacteria | 6371 |
| 55 | Ga0097620_100001623 | 3300006931 | Bacteria | 22983 |
| 56 | Ga0097620_100086428 | 3300006931 | Bacteria | 3183 |
| 57 | Ga0105240_10000852 | 3300009093 | Bacteria | 54967 |
| 58 | Ga0105240_10001362 | 3300009093 | Bacteria | 41962 |
| 59 | Ga0105240_10001529 | 3300009093 | Bacteria | 39339 |
| 60 | Ga0105240_10012743 | 3300009093 | Bacteria | 11588 |
| 61 | Ga0105240_10025252 | 3300009093 | Bacteria | 7812 |
| 62 | Ga0105240_10068209 | 3300009093 | Unclassified | 4406 |
| 63 | Ga0111539_10037312 | 3300009094 | Bacteria | 5869 |
| 64 | Ga0114129_10004444 | 3300009147 | Bacteria | 19787 |
| 65 | Ga0114129_10020814 | 3300009147 | Bacteria | 9317 |
| 66 | Ga0105237_10002587 | 3300009545 | Bacteria | 22316 |
| 67 | Ga0105237_10016775 | 3300009545 | Bacteria | 7604 |
| 68 | Ga0105237_10017231 | 3300009545 | Bacteria | 7492 |
| 69 | Ga0105237_10017669 | 3300009545 | Bacteria | 7392 |
| 70 | Ga0105249_10010547 | 3300009553 | Bacteria | 8119 |
| 71 | Ga0105239_10000101 | 3300010375 | Bacteria | 119610 |
| 72 | Ga0105239_10000564 | 3300010375 | Bacteria | 53130 |
| 73 | Ga0105239_10015152 | 3300010375 | Bacteria | 8544 |
| 74 | Ga0105239_10026574 | 3300010375 | Bacteria | 6371 |
| 75 | Ga0105239_10118855 | 3300010375 | Bacteria | 2933 |
| 76 | Ga0157373_10078922 | 3300013100 | Unclassified | 2321 |
| 77 | Ga0157370_10004110 | 3300013104 | Bacteria | 16868 |
| 78 | Ga0157370_10088301 | 3300013104 | Unclassified | 2912 |
| 79 | Ga0157369_10042428 | 3300013105 | Bacteria | 4962 |
| 80 | Ga0157374_10000002 | 3300013296 | Bacteria | 1054226 |
| 81 | Ga0157374_10010632 | 3300013296 | Bacteria | 7926 |
| 82 | Ga0157374_10027333 | 3300013296 | Bacteria | 5144 |
| 83 | Ga0157378_10004254 | 3300013297 | Bacteria | 12623 |
| 84 | Ga0163162_10001621 | 3300013306 | Bacteria | 21058 |
| 85 | Ga0163162_10003519 | 3300013306 | Bacteria | 14982 |
| 86 | Ga0163162_10009418 | 3300013306 | Bacteria | 9500 |
| 87 | Ga0157372_10010827 | 3300013307 | Bacteria | 9710 |
| 88 | Ga0157372_10014481 | 3300013307 | Bacteria | 8439 |
| 89 | Ga0157372_10018063 | 3300013307 | Bacteria | 7581 |
| 90 | Ga0163163_10092725 | 3300014325 | Bacteria | 3036 |
| 91 | Ga0157380_10000246 | 3300014326 | Bacteria | 32650 |
| 92 | Ga0157380_10024100 | 3300014326 | Unclassified | 4601 |
| 93 | Ga0157379_10017934 | 3300014968 | Bacteria | 6236 |
| 94 | Ga0157379_10033473 | 3300014968 | Bacteria | 4583 |
| 95 | Ga0157379_10033908 | 3300014968 | Bacteria | 4552 |
| 96 | Ga0157376_10009115 | 3300014969 | Bacteria | 7193 |
| 97 | Ga0157376_10119889 | 3300014969 | Bacteria | 2330 |
| 98 | Ga0163161_10016220 | 3300017792 | Bacteria | 5199 |
| 99 | Ga0213876_10011564 | 3300021384 | Bacteria | 4710 |
| 100 | Ga0209436_101883 | 3300025208 | Bacteria | 6783 |
| 101 | Ga0209258_100126 | 3300025242 | Bacteria | 177846 |
| 102 | Ga0209148_1000281 | 3300025254 | Bacteria | 78175 |
| 103 | Ga0209673_1000694 | 3300025273 | Bacteria | 47983 |
| 104 | Ga0209130_1001435 | 3300025284 | Bacteria | 15807 |
| 105 | Ga0209564_1005745 | 3300025295 | Bacteria | 6928 |
| 106 | Ga0209050_1000163 | 3300025298 | Bacteria | 154895 |
| 107 | Ga0207426_1000096 | 3300025302 | Bacteria | 271627 |
| 108 | Ga0207426_1002517 | 3300025302 | Bacteria | 11523 |
| 109 | Ga0209257_1001886 | 3300025304 | Bacteria | 22664 |
| 110 | Ga0207647_10022475 | 3300025904 | Bacteria | 4187 |
| 111 | Ga0207645_10018833 | 3300025907 | Bacteria | 4535 |
| 112 | Ga0207705_10071864 | 3300025909 | Bacteria | 2509 |
| 113 | Ga0207695_10000060 | 3300025913 | Bacteria | 360217 |
| 114 | Ga0207695_10000185 | 3300025913 | Bacteria | 180225 |
| 115 | Ga0207695_10000272 | 3300025913 | Bacteria | 129871 |
| 116 | Ga0207695_10055244 | 3300025913 | Bacteria | 4140 |
| 117 | Ga0207671_10000228 | 3300025914 | Bacteria | 84575 |
| 118 | Ga0207671_10008076 | 3300025914 | Bacteria | 8991 |
| 119 | Ga0207671_10008722 | 3300025914 | Bacteria | 8549 |
| 120 | Ga0207671_10010601 | 3300025914 | Bacteria | 7587 |
| 121 | Ga0207657_10001201 | 3300025919 | Bacteria | 27551 |
| 122 | Ga0207649_10005208 | 3300025920 | Bacteria | 7022 |
| 123 | Ga0207649_10060249 | 3300025920 | Bacteria | 2385 |
| 124 | Ga0207650_10025308 | 3300025925 | Bacteria | 4227 |
| 125 | Ga0207706_10061417 | 3300025933 | Bacteria | 3309 |
| 126 | Ga0207706_10082031 | 3300025933 | Bacteria | 2834 |
| 127 | Ga0207670_10023004 | 3300025936 | Bacteria | 3872 |
| 128 | Ga0207691_10010342 | 3300025940 | Bacteria | 8949 |
| 129 | Ga0207661_10001142 | 3300025944 | Bacteria | 17715 |
| 130 | Ga0207661_10076409 | 3300025944 | Bacteria | 2750 |
| 131 | Ga0207679_10000626 | 3300025945 | Bacteria | 23581 |
| 132 | Ga0207679_10020165 | 3300025945 | Bacteria | 4495 |
| 133 | Ga0207667_10001626 | 3300025949 | Bacteria | 28263 |
| 134 | Ga0207667_10017626 | 3300025949 | Bacteria | 8033 |
| 135 | Ga0207640_10029258 | 3300025981 | Bacteria | 3380 |
| 136 | Ga0207677_10019119 | 3300026023 | Bacteria | 4129 |
| 137 | Ga0207639_10003798 | 3300026041 | Bacteria | 10168 |
| 138 | Ga0207702_10031990 | 3300026078 | Bacteria | 4388 |
| 139 | Ga0207648_10002709 | 3300026089 | Bacteria | 18840 |
| 140 | Ga0207674_10003703 | 3300026116 | Bacteria | 18665 |
| 141 | Ga0207698_10024042 | 3300026142 | Bacteria | 4269 |
| 142 | Ga0268264_10007970 | 3300028381 | Bacteria | 8813 |
| 143 | Ga0307515_10000002 | 3300028794 | Bacteria | 1231751 |
| 144 | Ga0265324_10009499 | 3300029957 | Bacteria | 3794 |
| 145 | Ga0307511_10001223 | 3300030521 | Bacteria | 27242 |
| 146 | Ga0265327_10000022 | 3300031251 | Bacteria | 402724 |
| 147 | Ga0265327_10000284 | 3300031251 | Bacteria | 100178 |
| 148 | Ga0265327_10001194 | 3300031251 | Bacteria | 35148 |
| 149 | Ga0307509_10053059 | 3300031507 | Bacteria | 4326 |
| 150 | Ga0307413_10003688 | 3300031824 | Bacteria | 6509 |
| 151 | Ga0307510_10001239 | 3300033180 | Bacteria | 27713 |
| 152 | Ga0373934_0003335 | 3300035086 | Bacteria | 5882 |
| 153 | Ga0373937_0007309 | 3300036401 | Bacteria | 9560 |
| 154 | Ga0395905_0054297 | 3300037471 | Bacteria | 3750 |
| 155 | Ga0436365_1480084 | 3300039437 | Bacteria | 25831 |
| 156 | Ga0439431_0005260 | 3300041997 | Bacteria | 2854 |
| 157 | Ga0466969_0006662 | 3300044656 | Bacteria | 6137 |
| 158 | Ga0466972_0000014 | 3300044658 | Bacteria | 216776 |
| 159 | Ga0466972_0000031 | 3300044658 | Bacteria | 159625 |
| 160 | Ga0466966_0001333 | 3300044684 | Bacteria | 15840 |
| 161 | Ga0453684_0017043 | 3300044712 | Bacteria | 11282 |
| 162 | Ga0466970_0000352 | 3300044765 | Bacteria | 22307 |
| 163 | Ga0466957_0000080 | 3300044842 | Bacteria | 38661 |
| 164 | Ga0466959_0000034 | 3300045049 | Bacteria | 108946 |
| 165 | Ga0466959_0001824 | 3300045049 | Bacteria | 13362 |
| 166 | Ga0495580_0018646 | 3300046472 | Bacteria | 5164 |
| 167 | Ga0495628_0019238 | 3300046516 | Bacteria | 5647 |
| 168 | Ga0495630_0010305 | 3300046517 | Bacteria | 6745 |
| 169 | Ga0495648_0001889 | 3300046524 | Bacteria | 20019 |
| 170 | Ga0495587_0054626 | 3300046536 | Bacteria | 2353 |
| 171 | Ga0495668_0012705 | 3300046616 | Bacteria | 4988 |
| 172 | Ga0495634_0013654 | 3300046642 | Bacteria | 5867 |
| 173 | Ga0495611_0000431 | 3300046648 | Bacteria | 25923 |
| 174 | Ga0495635_0084490 | 3300046663 | Bacteria | 2172 |
| 175 | Ga0495636_0000096 | 3300047318 | Bacteria | 37089 |
| 176 | Ga0495672_0024206 | 3300047320 | Bacteria | 3916 |
| 177 | Ga0495684_0029982 | 3300047471 | Bacteria | 4177 |
| 178 | Ga0495686_0000041 | 3300047472 | Bacteria | 297599 |
| 179 | Ga0496111_0091376 | 3300048914 | Bacteria | 2231 |
| 180 | Ga0501032_0003664 | 3300049569 | Bacteria | 11682 |
| 181 | Ga0501034_0001294 | 3300049571 | Bacteria | 33843 |
| 182 | Ga0501034_0018262 | 3300049571 | Bacteria | 7193 |
| 183 | Ga0501036_0001449 | 3300049572 | Bacteria | 18231 |
| 184 | Ga0501039_0015138 | 3300049575 | Bacteria | 5902 |
| 185 | Ga0501047_0004997 | 3300049581 | Bacteria | 12449 |
| 186 | Ga0501048_0035705 | 3300049582 | Bacteria | 3577 |
| 187 | Ga0501068_0033572 | 3300049584 | Bacteria | 3056 |
| 188 | Ga0501073_0000270 | 3300049589 | Bacteria | 34510 |
| 189 | Ga0501074_0000322 | 3300049590 | Bacteria | 27772 |
| 190 | Ga0501223_003520 | 3300049663 | Bacteria | 3399 |
| 191 | Ga0501219_000036 | 3300049703 | Bacteria | 21384 |
| 192 | Ga0501221_000453 | 3300049704 | Bacteria | 6394 |
| 193 | Ga0501225_0001321 | 3300049705 | Bacteria | 7698 |
| 194 | Ga0501245_000928 | 3300049708 | Bacteria | 3733 |
| 195 | Ga0501080_0003488 | 3300049742 | Bacteria | 13855 |
| 196 | Ga0501035_0007410 | 3300049822 | Bacteria | 10251 |
| 197 | Ga0501044_0022418 | 3300049823 | Bacteria | 6729 |
| 198 | Ga0501044_0028150 | 3300049823 | Bacteria | 5931 |
| 199 | Ga0501044_0076887 | 3300049823 | Bacteria | 3387 |
| 200 | Ga0501284_00038 | 3300050005 | Bacteria | 54754 |
| 201 | nmdc:mga0k408_35809_c1 | 3300050493 | Bacteria | 2846 |
| 202 | nmdc:mga0k408_57316_c2 | 3300050493 | Bacteria | 1908 |
| 203 | nmdc:mga05p37_2172_c1 | 3300050507 | Bacteria | 22874 |
| 204 | Ga0500578_0000017 | 3300053086 | Bacteria | 178494 |
| 205 | Ga0500644_0000424 | 3300053088 | Bacteria | 19802 |
| 206 | Ga0500583_0000173 | 3300053092 | Bacteria | 26561 |
| 207 | Ga0500583_0001289 | 3300053092 | Bacteria | 7157 |
| 208 | Ga0500562_000095 | 3300053108 | Bacteria | 35281 |
| 209 | Ga0500569_000240 | 3300053109 | Bacteria | 8699 |
| 210 | Ga0500642_0002575 | 3300053130 | Bacteria | 5350 |
| 211 | Ga0500658_0004218 | 3300053134 | Bacteria | 5395 |
| 212 | Ga0500577_0000599 | 3300053142 | Bacteria | 9266 |
| 213 | Ga0500590_028593 | 3300053148 | Bacteria | 2893 |
| 214 | Ga0500604_0002827 | 3300053151 | Bacteria | 4711 |
| 215 | Ga0500622_0001166 | 3300053156 | Bacteria | 21778 |
| 216 | Ga0500622_0001188 | 3300053156 | Bacteria | 21489 |
| 217 | Ga0500645_005412 | 3300053730 | Bacteria | 4705 |
| 218 | 2738729363 | 2738541278 | Bacteria | 9755573 |
| 219 | 2819590614 | 2818991444 | Bacteria | 6968812 |
| 220 | 2819678125 | 2818991460 | Bacteria | 7595395 |
| 221 | 2883068309 | 2883068021 | Bacteria | 6192739 |
| 222 | 2884792972 | 2884791551 | Bacteria | 8511252 |
| 223 | 2929156018 | 2929154850 | Bacteria | 6753285 |
| 224 | 2929181166 | 2929177148 | Bacteria | 7883697 |
| 225 | 2929243271 | 2929239360 | Bacteria | 7745570 |
| 226 | 2945983568 | 2945977869 | Bacteria | 7777518 |
| 227 | 2946017044 | 2946013367 | Bacteria | 7766675 |
| 228 | rootH2_10011539 | |||
| 229 | rootH2_10012629 | |||
| 230 | rootH2_10065832 | |||
| 231 | rootH1_10025049 | |||
| 232 | rootH1_10058899 | |||
| 233 | JGI25160J50197_1003268 | |||
| 234 | Ga0055535_1004375 | |||
| 235 | Ga0055526_1011107 | |||
| 236 | Ga0055528_1000123 | |||
| 237 | Ga0055530_10000315 | |||
| 238 | Ga0065165_1007232 | |||
| 239 | Ga0065704_10073329 | |||
| 240 | Ga0070683_100001327 | |||
| 241 | Ga0070683_100003759 | |||
| 242 | Ga0070683_100004547 | |||
| 243 | Ga0070690_100012872 | |||
| 244 | Ga0070690_100018004 | |||
| 245 | Ga0070670_100032153 | |||
| 246 | Ga0070670_100033790 | |||
| 247 | Ga0068869_100022659 | |||
| 248 | Ga0070680_100001311 | |||
| 249 | Ga0070682_100000176 | |||
| 250 | Ga0070689_100037753 | |||
| 251 | Ga0070691_10028974 | |||
| 252 | Ga0070661_100000537 | |||
| 253 | Ga0070661_100014985 | |||
| 254 | Ga0070674_100010276 | |||
| 255 | Ga0070662_100011000 | |||
| 256 | Ga0070662_100013881 | |||
| 257 | Ga0068867_100021098 | |||
| 258 | Ga0070684_100001858 | |||
| 259 | Ga0070684_100002677 | |||
| 260 | Ga0068853_100025725 | |||
| 261 | Ga0068853_100028758 | |||
| 262 | Ga0070665_100045120 | |||
| 263 | Ga0068855_100011913 | |||
| 264 | Ga0070664_100010404 | |||
| 265 | Ga0068857_100001511 | |||
| 266 | Ga0068857_100014273 | |||
| 267 | Ga0068854_100020139 | |||
| 268 | Ga0068856_100026845 | |||
| 269 | Ga0068856_100039159 | |||
| 270 | Ga0068852_100000740 | |||
| 271 | Ga0068852_100075332 | |||
| 272 | Ga0068859_100001623 | |||
| 273 | Ga0068859_100086430 | |||
| 274 | Ga0068860_100004912 | |||
| 275 | Ga0068860_100016022 | |||
| 276 | Ga0081539_10001245 | |||
| 277 | Ga0081539_10024650 | |||
| 278 | Ga0075366_10014415 | |||
| 279 | Ga0097621_100003131 | |||
| 280 | Ga0097621_100005125 | |||
| 281 | Ga0068871_100012018 | |||
| 282 | Ga0097620_100001623 | |||
| 283 | Ga0097620_100086428 | |||
| 284 | Ga0105240_10000852 | |||
| 285 | Ga0105240_10001362 | |||
| 286 | Ga0105240_10001529 | |||
| 287 | Ga0105240_10012743 | |||
| 288 | Ga0105240_10025252 | |||
| 289 | Ga0105240_10068209 | |||
| 290 | Ga0111539_10037312 | |||
| 291 | Ga0114129_10004444 | |||
| 292 | Ga0114129_10020814 | |||
| 293 | Ga0105237_10002587 | |||
| 294 | Ga0105237_10016775 | |||
| 295 | Ga0105237_10017231 | |||
| 296 | Ga0105237_10017669 | |||
| 297 | Ga0105249_10010547 | |||
| 298 | Ga0105239_10000101 | |||
| 299 | Ga0105239_10000564 | |||
| 300 | Ga0105239_10015152 | |||
| 301 | Ga0105239_10026574 | |||
| 302 | Ga0105239_10118855 | |||
| 303 | Ga0157373_10078922 | |||
| 304 | Ga0157370_10004110 | |||
| 305 | Ga0157370_10088301 | |||
| 306 | Ga0157369_10042428 | |||
| 307 | Ga0157374_10000002 | |||
| 308 | Ga0157374_10010632 | |||
| 309 | Ga0157374_10027333 | |||
| 310 | Ga0157378_10004254 | |||
| 311 | Ga0163162_10001621 | |||
| 312 | Ga0163162_10003519 | |||
| 313 | Ga0163162_10009418 | |||
| 314 | Ga0157372_10010827 | |||
| 315 | Ga0157372_10014481 | |||
| 316 | Ga0157372_10018063 | |||
| 317 | Ga0163163_10092725 | |||
| 318 | Ga0157380_10000246 | |||
| 319 | Ga0157380_10024100 | |||
| 320 | Ga0157379_10017934 | |||
| 321 | Ga0157379_10033473 | |||
| 322 | Ga0157379_10033908 | |||
| 323 | Ga0157376_10009115 | |||
| 324 | Ga0157376_10119889 | |||
| 325 | Ga0163161_10016220 | |||
| 326 | Ga0213876_10011564 | |||
| 327 | Ga0209436_101883 | |||
| 328 | Ga0209258_100126 | |||
| 329 | Ga0209148_1000281 | |||
| 330 | Ga0209673_1000694 | |||
| 331 | Ga0209130_1001435 | |||
| 332 | Ga0209564_1005745 | |||
| 333 | Ga0209050_1000163 | |||
| 334 | Ga0207426_1000096 | |||
| 335 | Ga0207426_1002517 | |||
| 336 | Ga0209257_1001886 | |||
| 337 | Ga0207647_10022475 | |||
| 338 | Ga0207645_10018833 | |||
| 339 | Ga0207705_10071864 | |||
| 340 | Ga0207695_10000060 | |||
| 341 | Ga0207695_10000185 | |||
| 342 | Ga0207695_10000272 | |||
| 343 | Ga0207695_10055244 | |||
| 344 | Ga0207671_10000228 | |||
| 345 | Ga0207671_10008076 | |||
| 346 | Ga0207671_10008722 | |||
| 347 | Ga0207671_10010601 | |||
| 348 | Ga0207657_10001201 | |||
| 349 | Ga0207649_10005208 | |||
| 350 | Ga0207649_10060249 | |||
| 351 | Ga0207650_10025308 | |||
| 352 | Ga0207706_10061417 | |||
| 353 | Ga0207706_10082031 | |||
| 354 | Ga0207670_10023004 | |||
| 355 | Ga0207691_10010342 | |||
| 356 | Ga0207661_10001142 | |||
| 357 | Ga0207661_10076409 | |||
| 358 | Ga0207679_10000626 | |||
| 359 | Ga0207679_10020165 | |||
| 360 | Ga0207667_10001626 | |||
| 361 | Ga0207667_10017626 | |||
| 362 | Ga0207640_10029258 | |||
| 363 | Ga0207677_10019119 | |||
| 364 | Ga0207639_10003798 | |||
| 365 | Ga0207702_10031990 | |||
| 366 | Ga0207648_10002709 | |||
| 367 | Ga0207674_10003703 | |||
| 368 | Ga0207698_10024042 | |||
| 369 | Ga0268264_10007970 | |||
| 370 | Ga0307515_10000002 | |||
| 371 | Ga0265324_10009499 | |||
| 372 | Ga0307511_10001223 | |||
| 373 | Ga0265327_10000022 | |||
| 374 | Ga0265327_10000284 | |||
| 375 | Ga0265327_10001194 | |||
| 376 | Ga0307509_10053059 | |||
| 377 | Ga0307413_10003688 | |||
| 378 | Ga0307510_10001239 | |||
| 379 | Ga0373934_0003335 | |||
| 380 | Ga0373937_0007309 | |||
| 381 | Ga0395905_0054297 | |||
| 382 | Ga0436365_1480084 | |||
| 383 | Ga0439431_0005260 | |||
| 384 | Ga0466969_0006662 | |||
| 385 | Ga0466972_0000014 | |||
| 386 | Ga0466972_0000031 | |||
| 387 | Ga0466966_0001333 | |||
| 388 | Ga0453684_0017043 | |||
| 389 | Ga0466970_0000352 | |||
| 390 | Ga0466957_0000080 | |||
| 391 | Ga0466959_0000034 | |||
| 392 | Ga0466959_0001824 | |||
| 393 | Ga0495580_0018646 | |||
| 394 | Ga0495628_0019238 | |||
| 395 | Ga0495630_0010305 | |||
| 396 | Ga0495648_0001889 | |||
| 397 | Ga0495587_0054626 | |||
| 398 | Ga0495668_0012705 | |||
| 399 | Ga0495634_0013654 | |||
| 400 | Ga0495611_0000431 | |||
| 401 | Ga0495635_0084490 | |||
| 402 | Ga0495636_0000096 | |||
| 403 | Ga0495672_0024206 | |||
| 404 | Ga0495684_0029982 | |||
| 405 | Ga0495686_0000041 | |||
| 406 | Ga0496111_0091376 | |||
| 407 | Ga0501032_0003664 | |||
| 408 | Ga0501034_0001294 | |||
| 409 | Ga0501034_0018262 | |||
| 410 | Ga0501036_0001449 | |||
| 411 | Ga0501039_0015138 | |||
| 412 | Ga0501047_0004997 | |||
| 413 | Ga0501048_0035705 | |||
| 414 | Ga0501068_0033572 | |||
| 415 | Ga0501073_0000270 | |||
| 416 | Ga0501074_0000322 | |||
| 417 | Ga0501223_003520 | |||
| 418 | Ga0501219_000036 | |||
| 419 | Ga0501221_000453 | |||
| 420 | Ga0501225_0001321 | |||
| 421 | Ga0501245_000928 | |||
| 422 | Ga0501080_0003488 | |||
| 423 | Ga0501035_0007410 | |||
| 424 | Ga0501044_0022418 | |||
| 425 | Ga0501044_0028150 | |||
| 426 | Ga0501044_0076887 | |||
| 427 | Ga0501284_00038 | |||
| 428 | nmdc:mga0k408_35809_c1 | |||
| 429 | nmdc:mga0k408_57316_c2 | |||
| 430 | nmdc:mga05p37_2172_c1 | |||
| 431 | Ga0500578_0000017 | |||
| 432 | Ga0500644_0000424 | |||
| 433 | Ga0500583_0000173 | |||
| 434 | Ga0500583_0001289 | |||
| 435 | Ga0500562_000095 | |||
| 436 | Ga0500569_000240 | |||
| 437 | Ga0500642_0002575 | |||
| 438 | Ga0500658_0004218 | |||
| 439 | Ga0500577_0000599 | |||
| 440 | Ga0500590_028593 | |||
| 441 | Ga0500604_0002827 | |||
| 442 | Ga0500622_0001166 | |||
| 443 | Ga0500622_0001188 | |||
| 444 | Ga0500645_005412 | |||
| 445 | 2738729363 | |||
| 446 | 2819590614 | |||
| 447 | 2819678125 | |||
| 448 | 2883068309 | |||
| 449 | 2884792972 | |||
| 450 | 2929156018 | |||
| 451 | 2929181166 | |||
| 452 | 2929243271 | |||
| 453 | 2945983568 | |||
| 454 | 2946017044 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2o8r-assembly1.cif.gz_A | crystal structure of polyphosphate kinase from porphyromonas gingivalis | 0.8755 | 32 | 718 |
| 2o8r-assembly1.cif.gz_A | crystal structure of polyphosphate kinase from porphyromonas gingivalis | 0.8679 | 32 | 718 |
| 1xdo-assembly1.cif.gz_A | crystal structure of escherichia coli polyphosphate kinase | 0.866 | 32 | 721 |
| 1xdo-assembly1.cif.gz_A | crystal structure of escherichia coli polyphosphate kinase | 0.8614 | 32 | 721 |
| 2o8r-assembly1.cif.gz_B | crystal structure of polyphosphate kinase from porphyromonas gingivalis | 0.8597 | 37 | 718 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1xdoA04 | Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A | 0.9672 | 535 | 721 | 3.30.870.10 |
| 1xdoA04 | Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A | 0.9519 | 535 | 721 | 3.30.870.10 |
| af_Q54BM7_688_868_3.30.870.10 | Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A | 0.9479 | 358 | 523 | 3.30.870.10 |
| af_Q54BM7_872_1047_3.30.870.10 | Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A | 0.9447 | 540 | 717 | 3.30.870.10 |
| af_Q54BM7_872_1047_3.30.870.10 | Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A | 0.9343 | 540 | 717 | 3.30.870.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3RX12-F1-model_v4 | Polyphosphate kinase 1 | 0.9926 | 443 | 717 |
GO:0006799
GO:0008976 GO:0009358 |
| AF-A0A0M3CIM8-F1-model_v4 | deleted | 0.9841 | 544 | 717 |
|
| AF-A0A519UI15-F1-model_v4 | Polyphosphate kinase 1 | 0.9761 | 534 | 719 |
GO:0006799
GO:0008976 GO:0009358 |
| AF-A0A380ZUW6-F1-model_v4 | Polyphosphate kinase (EC 2.7.4.1) | 0.9761 | 406 | 600 |
GO:0006799
GO:0008976 GO:0009358 |
| AF-A0A520CM20-F1-model_v4 | Polyphosphate kinase 1 | 0.9738 | 559 | 719 |
GO:0006799
GO:0008976 GO:0009358 |