F340091

General Info

Members Datasets Scaffolds Average Seq Length
227 174 177 332

Family's Representative Sequence

Representative Sequence 3300031730|Ga0307516_10240267|Ga0307516_102402671
Length 365
Sequence VLCCLRTYKLSLDGVQIESRIKLGIFMKNTNLLGLALSVLLTSTVAFAMDDVQPRQLRLGYGLQEQSNQGRAARMFTEEVAKLSGGKIKVRPMGASAVGSDVQMQQALIDGTLEMMVGSTSTLVTITKEMALWDTPFLVSNGKEADLLLDGPVGERVKAKLYDKGLVGLVYWENGFRNLTNNVRPIERMEDLNGVKVRVMQNAVFMESFKILGASPVPLAFSDLFTAMEKTTVDGQENPYNTILSSKFYQVQKYLTITNHVYSPWLMSVSRKYWDTLSATERNILTKAAKASRDFERKDTRDEAAKALTELKAIGMKVNELSFSESTRMRNKLTRVYALIGSNVGMDLMIETQNELMKARAGKKL

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
3 2547132374 Acidovorax radicis N35 Isolate Unclassified
4 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
5 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
6 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
7 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
8 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
9 2643221569 Achromobacter sp. Root565 Isolate Unclassified
10 2643221570 Acidovorax sp. Root568 Isolate Unclassified
11 2643221594 Achromobacter sp. Root170 Isolate Unclassified
12 2643221596 Acidovorax sp. Root70 Isolate Unclassified
13 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
14 2643221609 Acidovorax sp. Root217 Isolate Unclassified
15 2643221611 Acidovorax sp. Root219 Isolate Unclassified
16 2643221621 Achromobacter sp. Root83 Isolate Unclassified
17 2643221652 Acidovorax sp. Root402 Isolate Unclassified
18 2643221683 Variovorax sp. Root473 Isolate Unclassified
19 2643221717 Acidovorax sp. Root267 Isolate Unclassified
20 2721755523 Delftia sp. HK171 Isolate Unclassified
21 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
22 2738543012 Acidovorax sp. CF301 Isolate Unclassified
23 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
24 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
25 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
26 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
27 2816332133 Acidovorax radicis 2721A Isolate Unclassified
28 2823421272 Pseudomonas mendocina S5.2 Isolate Rhizoplane
29 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
30 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
31 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
32 2842747753 Variovorax sp. R-72060 Isolate Unclassified
33 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
34 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
35 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
36 2858950400 Achromobacter sp. K91 Isolate Unclassified
37 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
38 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
39 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
40 2919501602 Pseudomonas alcaliphila 3512 Isolate Unclassified
41 2926063275 Pseudomonas sp. 3400 Isolate Unclassified
42 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
43 2941479691
44 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
45 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
46 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
47 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
48 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
49 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
50 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
51 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
52 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
53 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
54 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
55 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
56 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
57 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
58 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
59 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
60 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
61 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
62 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
63 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
64 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
65 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
66 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
67 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
68 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
69 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
70 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
71 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
72 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
73 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
74 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
75 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
76 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
98 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
99 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
107 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
120 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
121 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
122 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
123 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
124 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
125 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
126 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
129 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
130 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
131 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
132 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
169 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
170 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
171 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
172 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
173 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere
174 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 77.97
Metatranscriptomes 0
Isolates 22.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.5
Nodule 2.64
Rhizoplane 5.29
Rhizosphere 40.53
Stem 0
Stem Tuber 0
Unclassified 33.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000131 3300003187 Bacteria 100435
2 rootH1_10034159 3300003316 Bacteria 7738
3 rootH2_10010872 3300003320 Bacteria 5780
4 rootL2_10001599 3300003322 Bacteria 15181
5 rootH1_10003124 3300003323 Bacteria 29947
6 Ga0055526_1003036 3300003771 Bacteria 10911
7 Ga0055524_1000687 3300003775 Bacteria 23745
8 Ga0055524_1008587 3300003775 Bacteria 4234
9 Ga0055530_10028366 3300003791 Bacteria 1512
10 Ga0055540_1026112 3300003792 Bacteria 1418
11 Ga0055531_10002235 3300003794 Bacteria 13108
12 Ga0055531_10003081 3300003794 Bacteria 10785
13 Ga0065165_1000059 3300005262 Bacteria 182314
14 Ga0065165_1000230 3300005262 Bacteria 97470
15 Ga0065704_10079164 3300005289 Bacteria 4242
16 Ga0065704_10126443 3300005289 Bacteria 1689
17 Ga0068869_100089910 3300005334 Bacteria 2307
18 Ga0070661_100022432 3300005344 Bacteria 4520
19 Ga0070669_100040471 3300005353 Bacteria 3388
20 Ga0070674_100036217 3300005356 Bacteria 3310
21 Ga0070659_100000531 3300005366 Bacteria 27861
22 Ga0068867_100125610 3300005459 Bacteria 1988
23 Ga0068867_100317197 3300005459 Bacteria 1290
24 Ga0070664_100090021 3300005564 Bacteria 2655
25 Ga0075365_10013601 3300006038 Bacteria 4875
26 Ga0075368_10014207 3300006042 Bacteria 2937
27 Ga0075363_100087157 3300006048 Bacteria 1715
28 Ga0075362_10034503 3300006177 Bacteria 2206
29 Ga0075362_10040584 3300006177 Bacteria 2049
30 Ga0075367_10144303 3300006178 Bacteria 1475
31 Ga0075366_10006963 3300006195 Bacteria 6225
32 Ga0075366_10042144 3300006195 Bacteria 2702
33 Ga0075366_10051072 3300006195 Bacteria 2457
34 Ga0075366_10097311 3300006195 Bacteria 1765
35 Ga0075370_10010356 3300006353 Bacteria 4873
36 Ga0075370_10077884 3300006353 Bacteria 1903
37 Ga0099823_1036187 3300006944 Bacteria 3807
38 Ga0079104_1000051 3300006946 Bacteria 171217
39 Ga0105243_10001580 3300009148 Bacteria 19898
40 Ga0105241_10050651 3300009174 Bacteria 3165
41 Ga0157319_1000036 3300012497 Bacteria 40333
42 Ga0157376_10000434 3300014969 Bacteria 26914
43 Ga0157376_10105581 3300014969 Bacteria 2470
44 Ga0209673_1006909 3300025273 Bacteria 5371
45 Ga0209673_1008673 3300025273 Bacteria 4497
46 Ga0209676_1008469 3300025292 Bacteria 4580
47 Ga0209025_1000028 3300025294 Bacteria 490678
48 Ga0209564_1000005 3300025295 Bacteria 1147192
49 Ga0209050_1003573 3300025298 Bacteria 11317
50 Ga0209050_1003718 3300025298 Bacteria 10976
51 Ga0209256_1000183 3300025299 Bacteria 122266
52 Ga0209256_1000419 3300025299 Bacteria 66925
53 Ga0209051_1001563 3300025303 Bacteria 18943
54 Ga0209257_1000254 3300025304 Bacteria 123175
55 Ga0209257_1003919 3300025304 Bacteria 12097
56 Ga0207654_10032202 3300025911 Bacteria 2894
57 Ga0207649_10019410 3300025920 Bacteria 3884
58 Ga0207646_10207255 3300025922 Bacteria 1771
59 Ga0207659_10242820 3300025926 Bacteria 1458
60 Ga0207687_10014664 3300025927 Bacteria 5132
61 Ga0207690_10113775 3300025932 Bacteria 1953
62 Ga0207709_10000363 3300025935 Bacteria 45700
63 Ga0207669_10032248 3300025937 Bacteria 2940
64 Ga0207689_10221799 3300025942 Bacteria 1562
65 Ga0207679_10016163 3300025945 Bacteria 4949
66 Ga0207648_10241176 3300026089 Bacteria 1609
67 Ga0209281_1000005 3300027111 Bacteria 1242284
68 Ga0209389_1087938 3300027296 Bacteria 1357
69 Ga0209984_1010928 3300027424 Bacteria 1171
70 Ga0209982_1002011 3300027552 Bacteria 2818
71 Ga0209970_1000085 3300027614 Bacteria 13000
72 Ga0209983_1000367 3300027665 Bacteria 9562
73 Ga0209971_1008861 3300027682 Bacteria 2388
74 Ga0209974_10003154 3300027876 Bacteria 5968
75 Ga0307515_10000665 3300028794 Bacteria 79372
76 Ga0307515_10005007 3300028794 Bacteria 27028
77 Ga0307515_10005346 3300028794 Bacteria 26084
78 Ga0307512_10058865 3300030522 Bacteria 2988
79 Ga0265332_10000003 3300031238 Bacteria 482849
80 Ga0307513_10001731 3300031456 Bacteria 31140
81 Ga0307513_10147902 3300031456 Bacteria 2264
82 Ga0307509_10094361 3300031507 Bacteria 3051
83 Ga0307408_100000004 3300031548 Bacteria 572889
84 Ga0307516_10010759 3300031730 Bacteria 10020
85 Ga0307516_10240267 3300031730 Bacteria 1510
86 Ga0307405_10126773 3300031731 Bacteria 1756
87 Ga0307412_10003122 3300031911 Bacteria 9204
88 Ga0307414_10160331 3300032004 Bacteria 1786
89 Ga0307414_10229939 3300032004 Bacteria 1528
90 Ga0395899_0023202 3300037312 Bacteria 4703
91 Ga0395900_0004176 3300037418 Bacteria 15339
92 Ga0395900_0091733 3300037418 Bacteria 3121
93 Ga0395905_0001014 3300037471 Bacteria 35806
94 Ga0395905_0001653 3300037471 Bacteria 26363
95 Ga0395905_0010271 3300037471 Bacteria 9115
96 Ga0395905_0086083 3300037471 Bacteria 2945
97 Ga0395905_0156484 3300037471 Bacteria 2143
98 Ga0395905_0422395 3300037471 Bacteria 1229
99 Ga0395901_0253719 3300038443 Bacteria 1832
100 Ga0395901_0476171 3300038443 Bacteria 1274
101 Ga0439466_0004710 3300041411 Bacteria 5245
102 Ga0439465_0026398 3300041413 Bacteria 1837
103 Ga0451833_0364594 3300041491 Bacteria 1491
104 Ga0451839_0598643 3300041496 Bacteria 2078
105 Ga0439449_0040516 3300042007 Bacteria 1732
106 Ga0450890_001601 3300042127 Bacteria 3245
107 Ga0439446_0000273 3300042156 Bacteria 9697
108 Ga0439464_0013053 3300042439 Bacteria 2219
109 Ga0451577_0040061 3300042876 Bacteria 4208
110 Ga0451577_0293836 3300042876 Bacteria 1472
111 Ga0466963_0291388 3300044694 Bacteria 1147
112 Ga0495583_0000040 3300046506 Bacteria 236558
113 Ga0495643_0015021 3300046522 Bacteria 4590
114 Ga0495597_0000596 3300046542 Bacteria 29731
115 Ga0495659_0005914 3300046664 Bacteria 3867
116 Ga0496101_0026842 3300048904 Bacteria 4005
117 Ga0496102_0012478 3300048905 Bacteria 7355
118 Ga0496102_0112311 3300048905 Bacteria 2541
119 Ga0496103_0014526 3300048906 Bacteria 4675
120 Ga0496104_0363917 3300048907 Bacteria 1359
121 Ga0496110_0141359 3300048913 Bacteria 2176
122 Ga0496110_0449979 3300048913 Bacteria 1174
123 Ga0496114_0337154 3300048917 Bacteria 1333
124 Ga0496116_0007746 3300048919 Bacteria 9448
125 Ga0496117_0009331 3300048920 Bacteria 9148
126 Ga0496118_0036411 3300048921 Bacteria 3979
127 Ga0496118_0054091 3300048921 Bacteria 3044
128 Ga0496119_0003197 3300048922 Bacteria 17161
129 Ga0496119_0022906 3300048922 Bacteria 4450
130 Ga0496119_0034631 3300048922 Bacteria 3321
131 Ga0496120_0005462 3300048923 Bacteria 10133
132 Ga0496121_0000776 3300048924 Bacteria 58521
133 Ga0496121_0015632 3300048924 Bacteria 7924
134 Ga0496121_0033122 3300048924 Bacteria 4683
135 Ga0496122_0000165 3300048925 Bacteria 157612
136 Ga0496122_0000320 3300048925 Bacteria 105489
137 Ga0496122_0002998 3300048925 Bacteria 22980
138 Ga0496122_0088877 3300048925 Bacteria 2115
139 Ga0496123_0000258 3300048926 Bacteria 107501
140 Ga0496123_0001117 3300048926 Bacteria 40109
141 Ga0496123_0001750 3300048926 Bacteria 28641
142 Ga0496123_0102232 3300048926 Bacteria 1664
143 Ga0496124_0033537 3300048927 Bacteria 4516
144 Ga0496124_0045728 3300048927 Bacteria 3752
145 Ga0496124_0078762 3300048927 Bacteria 2715
146 Ga0496125_0000042 3300048928 Bacteria 303305
147 Ga0496125_0009308 3300048928 Bacteria 10132
148 Ga0496126_0014133 3300048929 Bacteria 8083
149 Ga0496126_0031182 3300048929 Bacteria 5041
150 Ga0501031_0078425 3300049568 Bacteria 2152
151 Ga0501032_0000816 3300049569 Bacteria 25276
152 Ga0501033_0001967 3300049570 Bacteria 17892
153 Ga0501033_0271341 3300049570 Bacteria 1199
154 Ga0501034_0010232 3300049571 Bacteria 9783
155 Ga0501034_0163365 3300049571 Bacteria 2197
156 Ga0501036_0010724 3300049572 Bacteria 7575
157 Ga0501037_0054648 3300049573 Bacteria 2920
158 Ga0501038_0001840 3300049574 Bacteria 19624
159 Ga0501043_0000144 3300049579 Bacteria 66178
160 Ga0501043_0001690 3300049579 Bacteria 19153
161 Ga0501046_0000110 3300049580 Bacteria 86752
162 Ga0501047_0000143 3300049581 Bacteria 87124
163 Ga0501047_0020111 3300049581 Bacteria 6409
164 Ga0501048_0000756 3300049582 Bacteria 23677
165 Ga0501035_0000874 3300049822 Bacteria 32016
166 Ga0501035_0403249 3300049822 Bacteria 1137
167 Ga0501044_0001518 3300049823 Bacteria 27224
168 Ga0501044_0040901 3300049823 Bacteria 4828
169 nmdc:mga03683_74536_c1 3300050489 Bacteria 1456
170 nmdc:mga0k408_11074_c1 3300050493 Bacteria 4900
171 nmdc:mga0k408_171760_c1 3300050493 Bacteria 1292
172 nmdc:mga0k408_215_c1 3300050493 Bacteria 31065
173 nmdc:mga04h51_9272_c1 3300050495 Bacteria 2661
174 nmdc:mga07m45_11845_c2 3300050496 Bacteria 2846
175 nmdc:mga09592_13656_c1 3300050508 Bacteria 6637
176 Ga0500566_0089265 3300053094 Bacteria 1705
177 Ga0500556_0000102 3300053104 Bacteria 76549

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003320 rootH2_10010872 rootH2_100108724 273
2 3300044694 Ga0466963_0291388 Ga0466963_0291388_57_1088 295
3 3300025273 Ga0209673_1008673 Ga0209673_10086732 301
4 3300042127 Ga0450890_001601 Ga0450890_001601_1706_2812 302
5 3300050496 nmdc:mga07m45_11845_c2 nmdc:mga07m45_11845_c2_1085_2191 302
6 3300003775 Ga0055524_1000687 Ga0055524_100068715 303
7 3300006353 Ga0075370_10010356 Ga0075370_100103564 303
8 3300025299 Ga0209256_1000183 Ga0209256_10001837 303
9 3300003794 Ga0055531_10002235 Ga0055531_100022359 304
10 3300012497 Ga0157319_1000036 Ga0157319_100003619 304
11 3300025304 Ga0209257_1000254 Ga0209257_100025482 304
12 3300037471 Ga0395905_0001653 Ga0395905_0001653_7505_8539 304
13 3300050493 nmdc:mga0k408_171760_c1 nmdc:mga0k408_171760_c1_24_1130 304
14 3300005262 Ga0065165_1000230 Ga0065165_100023028 305
15 3300006195 Ga0075366_10051072 Ga0075366_100510722 305
16 3300003323 rootH1_10003124 rootH1_100031247 307
17 3300003775 Ga0055524_1008587 Ga0055524_10085872 307
18 3300003791 Ga0055530_10028366 Ga0055530_100283661 307
19 3300003792 Ga0055540_1026112 Ga0055540_10261121 307
20 3300003794 Ga0055531_10003081 Ga0055531_100030815 307
21 3300006944 Ga0099823_1036187 Ga0099823_10361874 307
22 3300025273 Ga0209673_1006909 Ga0209673_10069091 307
23 3300025298 Ga0209050_1003573 Ga0209050_10035738 307
24 3300025299 Ga0209256_1000419 Ga0209256_100041947 307
25 3300025303 Ga0209051_1001563 Ga0209051_100156312 307
26 3300025304 Ga0209257_1003919 Ga0209257_100391911 307
27 3300027296 Ga0209389_1087938 Ga0209389_10879381 307
28 3300003316 rootH1_10034159 rootH1_100341594 309
29 3300003322 rootL2_10001599 rootL2_100015996 309
30 3300037471 Ga0395905_0086083 Ga0395905_0086083_1282_2301 312
31 3300037471 Ga0395905_0156484 Ga0395905_0156484_926_1951 312
32 3300005262 Ga0065165_1000059 Ga0065165_100005985 313
33 3300003771 Ga0055526_1003036 Ga0055526_10030366 314
34 3300025295 Ga0209564_1000005 Ga0209564_1000005907 314
35 3300005334 Ga0068869_100089910 Ga0068869_1000899101 315
36 3300025942 Ga0207689_10221799 Ga0207689_102217992 315
37 3300031238 Ga0265332_10000003 Ga0265332_1000000348 315
38 3300049571 Ga0501034_0163365 Ga0501034_0163365_956_1963 317
39 3300006195 Ga0075366_10097311 Ga0075366_100973112 320
40 3300050489 nmdc:mga03683_74536_c1 nmdc:mga03683_74536_c1_38_1006 320
41 3300050493 nmdc:mga0k408_215_c1 nmdc:mga0k408_215_c1_8089_9102 320
42 3300042007 Ga0439449_0040516 Ga0439449_0040516_338_1354 324
43 3300006177 Ga0075362_10040584 Ga0075362_100405842 325
44 3300032004 Ga0307414_10160331 Ga0307414_101603312 326
45 3300041413 Ga0439465_0026398 Ga0439465_0026398_232_1350 326
46 3300053094 Ga0500566_0089265 Ga0500566_0089265_413_1435 326
47 3300005356 Ga0070674_100036217 Ga0070674_1000362172 327
48 3300005459 Ga0068867_100125610 Ga0068867_1001256102 327
49 3300025926 Ga0207659_10242820 Ga0207659_102428202 327
50 3300025937 Ga0207669_10032248 Ga0207669_100322482 327
51 3300048905 Ga0496102_0012478 Ga0496102_0012478_563_1597 327
52 3300049822 Ga0501035_0403249 Ga0501035_0403249_28_1047 327
53 iso_pu_bacteria 2523231067 2523470382 327
54 iso_pu_bacteria 2757320392 2757569617 327
55 iso_pu_bacteria 2600254954 2600444494 328
56 iso_pu_bacteria 2600255389 2602011579 328
57 iso_pu_bacteria 2728369097 2729145848 328
58 iso_pu_bacteria 2808606379 2808942942 328
59 iso_pu_bacteria 2919501602 2919503246 328
60 iso_pu_bacteria 2926063275 2926066183 328
61 iso_pu_bacteria 640427133 640488147 328
62 iso_pu_bacteria 651053060 651176099 328
63 iso_pu_bacteria 8034962539 8034964907 328
64 iso_pu_bacteria 2643221683 2644467378 329
65 iso_pu_bacteria 2823421272 2823423536 329
66 iso_pu_bacteria 2842718218 2842719338 329
67 iso_pu_bacteria 2842747753 2842749167 329
68 iso_pu_bacteria 2897803580 2897805357 329
69 iso_pu_bacteria 2928115317 2928116137 329
70 iso_pu_bacteria 2974320154 2974323532 329
71 3300037312 Ga0395899_0023202 Ga0395899_0023202_3550_4557 330
72 3300037418 Ga0395900_0004176 Ga0395900_0004176_10579_11586 330
73 3300037471 Ga0395905_0010271 Ga0395905_0010271_734_1741 330
74 3300038443 Ga0395901_0253719 Ga0395901_0253719_352_1359 330
75 3300042876 Ga0451577_0040061 Ga0451577_0040061_2460_3461 330
76 iso_pu_bacteria 2511231221 2512037723 330
77 iso_pu_bacteria 8001845381 8001847664 330
78 iso_pu_bacteria 8054002106 8054007002 330
79 3300037471 Ga0395905_0422395 Ga0395905_0422395_48_1055 331
80 3300046542 Ga0495597_0000596 Ga0495597_0000596_911_1918 331
81 iso_pu_bacteria 2643221603 2644029280 331
82 iso_pu_bacteria 2643221609 2644057180 331
83 iso_pu_bacteria 2643221611 2644071998 331
84 iso_pu_bacteria 2738543012 2739245989 331
85 iso_pu_bacteria 2816332133 2816471707 331
86 3300005353 Ga0070669_100040471 Ga0070669_1000404713 332
87 3300027424 Ga0209984_1010928 Ga0209984_10109282 332
88 3300027552 Ga0209982_1002011 Ga0209982_10020112 332
89 3300027665 Ga0209983_1000367 Ga0209983_10003678 332
90 3300027682 Ga0209971_1008861 Ga0209971_10088612 332
91 3300027876 Ga0209974_10003154 Ga0209974_100031545 332
92 3300031548 Ga0307408_100000004 Ga0307408_100000004137 332
93 3300031731 Ga0307405_10126773 Ga0307405_101267731 332
94 3300041411 Ga0439466_0004710 Ga0439466_0004710_1970_2983 332
95 3300042156 Ga0439446_0000273 Ga0439446_0000273_3515_4528 332
96 3300042439 Ga0439464_0013053 Ga0439464_0013053_783_1796 332
97 3300048925 Ga0496122_0000320 Ga0496122_0000320_90679_91686 332
98 3300048926 Ga0496123_0000258 Ga0496123_0000258_20128_21135 332
99 3300048927 Ga0496124_0078762 Ga0496124_0078762_1327_2334 332
100 3300049573 Ga0501037_0054648 Ga0501037_0054648_1692_2699 332
101 iso_pu_bacteria 2547132374 2548498010 332
102 iso_pu_bacteria 2643221570 2643865238 332
103 iso_pu_bacteria 2643221596 2643991459 332
104 iso_pu_bacteria 2643221652 2644292514 332
105 iso_pu_bacteria 2643221717 2644646037 332
106 iso_pu_bacteria 2721755523 2722883697 332
107 iso_pu_bacteria 2839138175 2839144586 332
108 iso_pu_bacteria 2848858292 2848862820 332
109 iso_pu_bacteria 2894023352 2894025604 332
110 iso_pu_bacteria 2990710928 2990711598 332
111 3300005459 Ga0068867_100317197 Ga0068867_1003171971 333
112 3300006038 Ga0075365_10013601 Ga0075365_100136015 333
113 3300006042 Ga0075368_10014207 Ga0075368_100142072 333
114 3300006048 Ga0075363_100087157 Ga0075363_1000871571 333
115 3300006177 Ga0075362_10034503 Ga0075362_100345032 333
116 3300006178 Ga0075367_10144303 Ga0075367_101443032 333
117 3300006195 Ga0075366_10042144 Ga0075366_100421442 333
118 3300006353 Ga0075370_10077884 Ga0075370_100778841 333
119 3300026089 Ga0207648_10241176 Ga0207648_102411762 333
120 3300048922 Ga0496119_0003197 Ga0496119_0003197_9452_10462 333
121 3300048925 Ga0496122_0002998 Ga0496122_0002998_160_1170 333
122 3300048926 Ga0496123_0001750 Ga0496123_0001750_13195_14205 333
123 3300049579 Ga0501043_0000144 Ga0501043_0000144_23961_24971 333
124 3300049580 Ga0501046_0000110 Ga0501046_0000110_41072_42082 333
125 3300049581 Ga0501047_0000143 Ga0501047_0000143_41444_42454 333
126 3300049582 Ga0501048_0000756 Ga0501048_0000756_3435_4445 333
127 3300050493 nmdc:mga0k408_11074_c1 nmdc:mga0k408_11074_c1_2736_3746 333
128 3300050495 nmdc:mga04h51_9272_c1 nmdc:mga04h51_9272_c1_1047_2057 333
129 3300053104 Ga0500556_0000102 Ga0500556_0000102_69012_70022 333
130 iso_pu_bacteria 2585428062 2587755945 333
131 iso_pu_bacteria 2597490356 2599106185 333
132 iso_pu_bacteria 2846952575 2846955983 333
133 3300027614 Ga0209970_1000085 Ga0209970_10000853 334
134 iso_pu_bacteria 2599185292 2599906750 334
135 iso_pu_bacteria 2643221569 2643862825 334
136 iso_pu_bacteria 2643221594 2643978257 334
137 iso_pu_bacteria 2643221621 2644123800 334
138 iso_pu_bacteria 2808606395 2809031430 334
139 iso_pu_bacteria 2857537821 2857539467 334
140 iso_pu_bacteria 2858950400 2858951097 334
141 iso_pu_bacteria 2941479691 2941485761 334
142 3300005289 Ga0065704_10079164 Ga0065704_100791642 335
143 3300005344 Ga0070661_100022432 Ga0070661_1000224325 335
144 3300005366 Ga0070659_100000531 Ga0070659_1000005312 335
145 3300005564 Ga0070664_100090021 Ga0070664_1000900213 335
146 3300006946 Ga0079104_1000051 Ga0079104_10000514 335
147 3300009148 Ga0105243_10001580 Ga0105243_1000158014 335
148 3300025920 Ga0207649_10019410 Ga0207649_100194102 335
149 3300025932 Ga0207690_10113775 Ga0207690_101137752 335
150 3300025935 Ga0207709_10000363 Ga0207709_100003635 335
151 3300025945 Ga0207679_10016163 Ga0207679_100161632 335
152 3300027111 Ga0209281_1000005 Ga0209281_10000051105 335
153 3300037418 Ga0395900_0091733 Ga0395900_0091733_1504_2511 335
154 3300037471 Ga0395905_0001014 Ga0395905_0001014_6913_7920 335
155 3300038443 Ga0395901_0476171 Ga0395901_0476171_18_1025 335
156 3300046506 Ga0495583_0000040 Ga0495583_0000040_129778_130785 335
157 3300046522 Ga0495643_0015021 Ga0495643_0015021_1686_2693 335
158 3300046664 Ga0495659_0005914 Ga0495659_0005914_2066_3073 335
159 3300048913 Ga0496110_0449979 Ga0496110_0449979_52_1059 335
160 3300049568 Ga0501031_0078425 Ga0501031_0078425_292_1308 335
161 3300049569 Ga0501032_0000816 Ga0501032_0000816_12520_13536 335
162 3300049570 Ga0501033_0001967 Ga0501033_0001967_564_1580 335
163 3300049571 Ga0501034_0010232 Ga0501034_0010232_5415_6431 335
164 3300049572 Ga0501036_0010724 Ga0501036_0010724_1145_2161 335
165 3300049574 Ga0501038_0001840 Ga0501038_0001840_16237_17253 335
166 3300049579 Ga0501043_0001690 Ga0501043_0001690_2374_3390 335
167 3300049581 Ga0501047_0020111 Ga0501047_0020111_3904_4920 335
168 3300049822 Ga0501035_0000874 Ga0501035_0000874_19352_20368 335
169 3300049823 Ga0501044_0001518 Ga0501044_0001518_15968_16984 335
170 3300050508 nmdc:mga09592_13656_c1 nmdc:mga09592_13656_c1_5325_6335 335
171 iso_pu_bacteria 2881412998 2881418012 335
172 3300005289 Ga0065704_10126443 Ga0065704_101264432 336
173 3300006195 Ga0075366_10006963 Ga0075366_100069636 336
174 3300009174 Ga0105241_10050651 Ga0105241_100506512 336
175 3300014969 Ga0157376_10000434 Ga0157376_1000043425 336
176 3300014969 Ga0157376_10105581 Ga0157376_101055812 336
177 3300025911 Ga0207654_10032202 Ga0207654_100322023 336
178 3300025922 Ga0207646_10207255 Ga0207646_102072552 336
179 3300025927 Ga0207687_10014664 Ga0207687_100146644 336
180 3300028794 Ga0307515_10000665 Ga0307515_1000066549 336
181 3300028794 Ga0307515_10005007 Ga0307515_100050076 336
182 3300028794 Ga0307515_10005346 Ga0307515_100053466 336
183 3300030522 Ga0307512_10058865 Ga0307512_100588652 336
184 3300031456 Ga0307513_10001731 Ga0307513_1000173110 336
185 3300031456 Ga0307513_10147902 Ga0307513_101479022 336
186 3300031507 Ga0307509_10094361 Ga0307509_100943614 336
187 3300031730 Ga0307516_10010759 Ga0307516_100107595 336
188 3300041491 Ga0451833_0364594 Ga0451833_0364594_117_1139 336
189 3300041496 Ga0451839_0598643 Ga0451839_0598643_234_1256 336
190 3300042876 Ga0451577_0293836 Ga0451577_0293836_51_1073 336
191 3300048904 Ga0496101_0026842 Ga0496101_0026842_2883_3902 336
192 3300048905 Ga0496102_0112311 Ga0496102_0112311_1453_2472 336
193 3300048906 Ga0496103_0014526 Ga0496103_0014526_101_1120 336
194 3300048907 Ga0496104_0363917 Ga0496104_0363917_312_1331 336
195 3300048913 Ga0496110_0141359 Ga0496110_0141359_205_1224 336
196 3300048917 Ga0496114_0337154 Ga0496114_0337154_17_1036 336
197 3300031730 Ga0307516_10240267 Ga0307516_102402671 337
198 3300025292 Ga0209676_1008469 Ga0209676_10084693 338
199 3300025298 Ga0209050_1003718 Ga0209050_10037182 338
200 3300031911 Ga0307412_10003122 Ga0307412_100031222 338
201 3300032004 Ga0307414_10229939 Ga0307414_102299392 338
202 3300048919 Ga0496116_0007746 Ga0496116_0007746_7321_8337 338
203 3300048920 Ga0496117_0009331 Ga0496117_0009331_7667_8683 338
204 3300048921 Ga0496118_0036411 Ga0496118_0036411_2429_3445 338
205 3300048921 Ga0496118_0054091 Ga0496118_0054091_1024_2040 338
206 3300048922 Ga0496119_0022906 Ga0496119_0022906_1221_2237 338
207 3300048922 Ga0496119_0034631 Ga0496119_0034631_664_1680 338
208 3300048923 Ga0496120_0005462 Ga0496120_0005462_485_1501 338
209 3300048924 Ga0496121_0000776 Ga0496121_0000776_25792_26808 338
210 3300048924 Ga0496121_0033122 Ga0496121_0033122_1979_2995 338
211 3300048925 Ga0496122_0000165 Ga0496122_0000165_10386_11402 338
212 3300048925 Ga0496122_0088877 Ga0496122_0088877_227_1243 338
213 3300048926 Ga0496123_0001117 Ga0496123_0001117_28509_29525 338
214 3300048926 Ga0496123_0102232 Ga0496123_0102232_407_1423 338
215 3300048927 Ga0496124_0033537 Ga0496124_0033537_1469_2485 338
216 3300048927 Ga0496124_0045728 Ga0496124_0045728_1909_2925 338
217 3300048928 Ga0496125_0000042 Ga0496125_0000042_176427_177443 338
218 3300048928 Ga0496125_0009308 Ga0496125_0009308_6960_7976 338
219 3300048929 Ga0496126_0014133 Ga0496126_0014133_3049_4065 338
220 3300048929 Ga0496126_0031182 Ga0496126_0031182_116_1132 338
221 iso_pu_bacteria 2739367655 2739612358 338
222 iso_pu_bacteria 2831905167 2831908027 338
223 3300003187 JGI25151J46595_10000131 JGI25151J46595_1000013150 339
224 3300025294 Ga0209025_1000028 Ga0209025_1000028385 339
225 3300048924 Ga0496121_0015632 Ga0496121_0015632_6718_7737 339
226 3300049570 Ga0501033_0271341 Ga0501033_0271341_55_1074 339
227 3300049823 Ga0501044_0040901 Ga0501044_0040901_55_1074 339

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03480

DctP

Bacterial extracellular solute-binding protein, family 7

59

343

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bcr-assembly1.cif.gz_A crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with galactonate 0.985 28 336
7bcr-assembly1.cif.gz_A crystal structure of the sugar acid binding protein dctpam from advenella mimigardefordensis strain dpn7t in complex with galactonate 0.9787 28 336
4pdh-assembly1.cif.gz_A crystal structure of a trap periplasmic solute binding protein from polaromonas sp js666 (bpro_1871, target efi-510164) bound to d-erythronate 0.9701 31 330
4pdd-assembly3.cif.gz_C crystal structure of a trap periplasmic solute binding protein from polaromonas sp js666 (bpro_0088, target efi-510167) bound to d-erythronate 0.9676 31 330
4nq8-assembly2.cif.gz_B crystal structure of a trap periplasmic solute binding protein from bordetella bronchispeptica (bb3421), target efi-510039, with density modeled as pantoate 0.9676 31 330
ID Description Score Start End Superfamily
4nq8A00 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bacterial extracellular solute-binding protein, family 7 0.9688 32 330 3.40.190.170
af_P37676_23_328_3.40.190.170 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bacterial extracellular solute-binding protein, family 7 0.9654 31 331 3.40.190.170
4nn3A00 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bacterial extracellular solute-binding protein, family 7 0.9583 33 336 3.40.190.170
4n8yB00 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bacterial extracellular solute-binding protein, family 7 0.9547 32 331 3.40.190.170
4oa4B00 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bacterial extracellular solute-binding protein, family 7 0.9539 31 333 3.40.190.170
ID Description Score Start End GO Terms
AF-A0A661WUJ4-F1-model_v4 C4-dicarboxylate ABC transporter substrate-binding protein 0.9824 32 338 GO:0030288
GO:0055085
AF-A0A2M6YN23-F1-model_v4 TRAP transporter substrate-binding protein DctP 0.98 110 228 GO:0055085
AF-A0A850ISY7-F1-model_v4 deleted 0.9799 23 337
AF-A0A3A6IB03-F1-model_v4 deleted 0.9758 30 336
AF-A0A2A2IAV9-F1-model_v4 C4-dicarboxylate ABC transporter substrate-binding protein 0.9754 29 334 GO:0030288
GO:0055085

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pLDDT pTM Quality
91.86 0.87 High
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Predicted Structure (AlphaFold2)

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