F340145

General Info

Members Datasets Scaffolds Average Seq Length
227 163 215 301

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0014587|Ga0373937_0014587_3240_4310
Length 356
Sequence MSSNRSQWEPSATPEDDGGVAIPATDSGLCQTACPQSKETMPIPDYQTLMLPLLKVAGDGKVHTKRDTVNELAIQFGVSEDERKELLPSGNQEVFDNRVGWARTYLKKALLINYVQRGQFQITERGQSVLAKNPPRIDVAYLRQFPEFLEFHKPSPTTAVQEQVQELETAKETPEELVASGYLKLRQQVEHELLSRVKACPPEFFERLVVKLLTSIGYGGTLADAGKAIGKSGDGGIDGVIKEDKLGLDQIYIQAKRWDDASVGRPEIQKFVGALHGKRARRGIFITTSTFTKDAKEYAESLETKVVLIDGIQVAELMFDYGVGVSTESTYVVKRIDNDFFEDEGGSNTTPDDAAK

Samples

Sample ID Description Type Environment
1 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
2 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
3 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
4 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
5 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
6 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
7 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
8 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
9 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
19 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
87 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
88 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
91 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
92 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
93 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
94 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
95 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
97 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
106 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
121 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
126 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
127 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
128 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
129 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.71
Metatranscriptomes 0
Isolates 5.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.52
Nodule 0.88
Rhizoplane 0.44
Rhizosphere 86.34
Stem 0
Stem Tuber 0
Unclassified 8.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10295419 3300003320 Bacteria 1632
2 rootH1_10011438 3300003323 Bacteria 4231
3 Ga0055536_1013202 3300003781 Bacteria 3001
4 Ga0055536_1014617 3300003781 Bacteria 2738
5 Ga0070676_10090745 3300005328 Bacteria 1871
6 Ga0070676_10241577 3300005328 Bacteria 1201
7 Ga0070683_100110412 3300005329 Bacteria 2594
8 Ga0070680_100260729 3300005336 Bacteria 1466
9 Ga0070691_10038667 3300005341 Bacteria 2253
10 Ga0070687_100258014 3300005343 Unclassified 1086
11 Ga0070688_100011950 3300005365 Bacteria 4849
12 Ga0070659_100114965 3300005366 Bacteria 2175
13 Ga0070705_100066052 3300005440 Bacteria 2168
14 Ga0070705_100221798 3300005440 Unclassified 1310
15 Ga0070681_10174310 3300005458 Bacteria 2072
16 Ga0070706_100176130 3300005467 Bacteria 1997
17 Ga0070707_100184139 3300005468 Bacteria 2036
18 Ga0070698_100074152 3300005471 Bacteria 3409
19 Ga0070699_100049676 3300005518 Bacteria 3631
20 Ga0070679_100092559 3300005530 Bacteria 3011
21 Ga0070697_100088032 3300005536 Unclassified 2564
22 Ga0068853_100000427 3300005539 Bacteria 28683
23 Ga0070686_100000040 3300005544 Bacteria 104772
24 Ga0070696_100057967 3300005546 Bacteria 2704
25 Ga0068855_100066362 3300005563 Bacteria 4207
26 Ga0068855_100619735 3300005563 Bacteria 1165
27 Ga0068857_100005901 3300005577 Bacteria 10458
28 Ga0068856_100008717 3300005614 Bacteria 9866
29 Ga0068856_100035843 3300005614 Bacteria 4863
30 Ga0081539_10079240 3300005985 Unclassified 1731
31 Ga0068871_100159244 3300006358 Bacteria 1930
32 Ga0075428_100113069 3300006844 Bacteria 2958
33 Ga0075430_100030925 3300006846 Unclassified 4546
34 Ga0075431_100143221 3300006847 Bacteria 2463
35 Ga0075433_10097691 3300006852 Bacteria 2599
36 Ga0075433_10148117 3300006852 Bacteria 2087
37 Ga0075434_100059601 3300006871 Unclassified 3795
38 Ga0075434_100102127 3300006871 Bacteria 2875
39 Ga0075429_100073605 3300006880 Unclassified 2975
40 Ga0075436_100000277 3300006914 Bacteria 32366
41 Ga0105240_10091289 3300009093 Bacteria 3721
42 Ga0105240_10218028 3300009093 Bacteria 2225
43 Ga0105240_10391009 3300009093 Unclassified 1568
44 Ga0105240_10444289 3300009093 Bacteria 1453
45 Ga0114129_10128892 3300009147 Unclassified 3476
46 Ga0105241_10155146 3300009174 Bacteria 1876
47 Ga0105237_10161568 3300009545 Bacteria 2238
48 Ga0105237_10185278 3300009545 Bacteria 2082
49 Ga0105237_10372676 3300009545 Bacteria 1432
50 Ga0105238_10148347 3300009551 Bacteria 2321
51 Ga0105238_10152687 3300009551 Unclassified 2284
52 Ga0105239_10003009 3300010375 Bacteria 21014
53 Ga0105239_10004787 3300010375 Bacteria 16060
54 Ga0105239_10017789 3300010375 Bacteria 7863
55 Ga0105239_10025744 3300010375 Bacteria 6480
56 Ga0105239_10136074 3300010375 Bacteria 2735
57 Ga0157371_10069611 3300013102 Bacteria 2492
58 Ga0157370_10001469 3300013104 Bacteria 29132
59 Ga0157370_10261399 3300013104 Bacteria 1600
60 Ga0157369_10009497 3300013105 Bacteria 11121
61 Ga0157369_10017409 3300013105 Bacteria 8075
62 Ga0157374_10335843 3300013296 Bacteria 1499
63 Ga0157378_10002626 3300013297 Bacteria 16005
64 Ga0157372_10149030 3300013307 Unclassified 2699
65 Ga0157372_10349052 3300013307 Bacteria 1724
66 Ga0157372_10477538 3300013307 Bacteria 1453
67 Ga0182008_10004690 3300014497 Bacteria 7933
68 Ga0182007_10002744 3300015262 Bacteria 8606
69 Ga0213872_10002290 3300021361 Bacteria 11409
70 Ga0213876_10018854 3300021384 Unclassified 3644
71 Ga0209676_1000856 3300025292 Bacteria 39248
72 Ga0209676_1010477 3300025292 Bacteria 3855
73 Ga0209025_1071310 3300025294 Unclassified 1232
74 Ga0207645_10096832 3300025907 Bacteria 1901
75 Ga0207684_10118996 3300025910 Bacteria 2264
76 Ga0207654_10248611 3300025911 Bacteria 1191
77 Ga0207707_10074983 3300025912 Bacteria 2951
78 Ga0207695_10076040 3300025913 Bacteria 3414
79 Ga0207695_10139659 3300025913 Unclassified 2373
80 Ga0207695_10424595 3300025913 Unclassified 1213
81 Ga0207671_10103429 3300025914 Bacteria 2160
82 Ga0207662_10227337 3300025918 Unclassified 1217
83 Ga0207657_10283312 3300025919 Bacteria 1315
84 Ga0207652_10069393 3300025921 Bacteria 3060
85 Ga0207646_10164035 3300025922 Bacteria 2006
86 Ga0207694_10048615 3300025924 Bacteria 3282
87 Ga0207690_10028080 3300025932 Bacteria 3563
88 Ga0207690_10074303 3300025932 Bacteria 2354
89 Ga0207706_10018176 3300025933 Bacteria 6325
90 Ga0207670_10286432 3300025936 Unclassified 1286
91 Ga0207661_10093634 3300025944 Bacteria 2508
92 Ga0207667_10074964 3300025949 Bacteria 3513
93 Ga0207639_10003087 3300026041 Bacteria 11195
94 Ga0207702_10054392 3300026078 Bacteria 3391
95 Ga0207702_10185706 3300026078 Bacteria 1917
96 Ga0265338_10046596 3300028800 Unclassified 3971
97 Ga0265338_10154456 3300028800 Unclassified 1779
98 Ga0265316_10012389 3300031344 Bacteria 7651
99 Ga0265316_10018957 3300031344 Bacteria 5904
100 Ga0307408_100000016 3300031548 Bacteria 356896
101 Ga0307408_100108372 3300031548 Bacteria 2129
102 Ga0316579_10075878 3300031691 Unclassified 1597
103 Ga0265314_10089617 3300031711 Bacteria 2006
104 Ga0316576_10005582 3300031727 Bacteria 7709
105 Ga0316578_10003200 3300031728 Bacteria 7419
106 Ga0316578_10055245 3300031728 Bacteria 2330
107 Ga0316578_10173487 3300031728 Bacteria 1299
108 Ga0316577_10004592 3300031733 Bacteria 7152
109 Ga0307413_10190612 3300031824 Bacteria 1472
110 Ga0316583_10032765 3300032133 Unclassified 1846
111 Ga0316585_10004619 3300032137 Plasmid 3847
112 Ga0316580_10007096 3300032139 Bacteria 3326
113 Ga0373926_0010346 3300035083 Bacteria 3125
114 Ga0373944_0040772 3300035089 Unclassified 1434
115 Ga0373923_0015637 3300035111 Bacteria 2868
116 Ga0373943_0127862 3300035170 Unclassified 1357
117 Ga0373946_0061783 3300035171 Unclassified 1596
118 Ga0316574_0003288 3300035398 Bacteria 8310
119 Ga0316574_0038491 3300035398 Bacteria 2936
120 Ga0373935_0080941 3300035692 Unclassified 2110
121 Ga0373947_0244695 3300035725 Unclassified 1184
122 Ga0373937_0010944 3300036401 Bacteria 7945
123 Ga0373937_0014587 3300036401 Bacteria 6941
124 Ga0373937_0189602 3300036401 Bacteria 1932
125 Ga0316582_0002279 3300036647 Bacteria 8948
126 Ga0316582_0020731 3300036647 Bacteria 3870
127 Ga0316584_0007229 3300036712 Bacteria 7576
128 Ga0316584_0007910 3300036712 Bacteria 7295
129 Ga0316584_0028247 3300036712 Bacteria 4134
130 Ga0316584_0239356 3300036712 Bacteria 1329
131 Ga0373925_0076547 3300037068 Unclassified 2537
132 Ga0400484_34213 3300038725 Bacteria 1324
133 Ga0400489_80523 3300039093 Bacteria 1347
134 Ga0436365_0931782 3300039437 Bacteria 14306
135 Ga0436365_1039967 3300039437 Bacteria 7606
136 Ga0436360_0054478 3300039438 Bacteria 2171
137 Ga0436361_0403678 3300039447 Bacteria 16039
138 Ga0436361_0445399 3300039447 Archaea 1963
139 Ga0436361_0501696 3300039447 Bacteria 5505
140 Ga0451806_197155 3300041462 Bacteria 5361
141 Ga0451577_0000246 3300042876 Bacteria 106753
142 Ga0451577_0032063 3300042876 Plasmid 4734
143 Ga0451577_0105235 3300042876 Bacteria 2522
144 Ga0466969_0086372 3300044656 Bacteria 1490
145 Ga0466972_0000842 3300044658 Bacteria 14705
146 Ga0466972_0001529 3300044658 Bacteria 11271
147 Ga0466973_0073984 3300044659 Bacteria 3016
148 Ga0453683_0007735 3300044673 Bacteria 7269
149 Ga0453683_0010638 3300044673 Bacteria 6090
150 Ga0453683_0012382 3300044673 Bacteria 5589
151 Ga0466965_0004571 3300044683 Bacteria 6161
152 Ga0466966_0194787 3300044684 Unclassified 1227
153 Ga0466964_0008819 3300044706 Bacteria 3791
154 Ga0453684_0000066 3300044712 Bacteria 465545
155 Ga0453684_0004312 3300044712 Bacteria 30306
156 Ga0453684_0004734 3300044712 Bacteria 28114
157 Ga0453684_0009893 3300044712 Bacteria 16464
158 Ga0453684_0021084 3300044712 Bacteria 9764
159 Ga0453684_0054112 3300044712 Bacteria 5232
160 Ga0453684_0054558 3300044712 Bacteria 5205
161 Ga0453684_0059831 3300044712 Plasmid 4906
162 Ga0453684_0080201 3300044712 Plasmid 4076
163 Ga0453684_0082851 3300044712 Bacteria 3994
164 Ga0453684_0112949 3300044712 Unclassified 3297
165 Ga0453684_0193817 3300044712 Bacteria 2375
166 Ga0453684_0203599 3300044712 Bacteria 2305
167 Ga0466971_0040673 3300044719 Bacteria 2088
168 Ga0466960_0000413 3300044901 Bacteria 14738
169 Ga0451576_0000237 3300045051 Bacteria 134538
170 Ga0451576_0014017 3300045051 Bacteria 8935
171 Ga0451576_0056274 3300045051 Bacteria 4114
172 Ga0495638_0076210 3300046460 Bacteria 2043
173 Ga0495653_0038724 3300046463 Bacteria 3741
174 Ga0495580_0282907 3300046472 Bacteria 1131
175 Ga0495582_0063529 3300046473 Unclassified 2040
176 Ga0495639_0086998 3300046475 Unclassified 1462
177 Ga0495584_0000880 3300046491 Bacteria 19350
178 Ga0495584_0001267 3300046491 Bacteria 15372
179 Ga0495583_0004410 3300046506 Bacteria 10094
180 Ga0495606_0002702 3300046507 Bacteria 20024
181 Ga0495630_0192691 3300046517 Bacteria 1555
182 Ga0495652_0005761 3300046529 Bacteria 11598
183 Ga0495597_0006461 3300046542 Bacteria 6064
184 Ga0495645_0000834 3300046543 Bacteria 20966
185 Ga0495645_0097288 3300046543 Bacteria 2096
186 Ga0495613_0050641 3300046689 Bacteria 3062
187 Ga0495581_0144185 3300047315 Unclassified 1390
188 Ga0495686_0000563 3300047472 Bacteria 52840
189 Ga0496117_0028419 3300048920 Bacteria 4331
190 Ga0496118_0001537 3300048921 Bacteria 34298
191 Ga0496122_0002365 3300048925 Bacteria 27063
192 Ga0496123_0001917 3300048926 Bacteria 27142
193 Ga0496124_0000775 3300048927 Bacteria 52105
194 Ga0496125_0003987 3300048928 Bacteria 17367
195 Ga0501033_0041869 3300049570 Bacteria 3416
196 Ga0501034_0001457 3300049571 Bacteria 31329
197 Ga0501047_0077538 3300049581 Bacteria 3196
198 Ga0501048_0126399 3300049582 Bacteria 1808
199 Ga0501075_0057869 3300049591 Unclassified 2919
200 Ga0501035_0083919 3300049822 Bacteria 2810
201 Ga0501044_0247297 3300049823 Unclassified 1726
202 nmdc:mga05p37_185737_c1 3300050507 Unclassified 2528
203 nmdc:mga09592_32386_c1 3300050508 Unclassified 4358
204 nmdc:mga06r32_47434_c1 3300050510 Bacteria 4103
205 nmdc:mga0n895_40770_c1 3300050512 Bacteria 4511
206 nmdc:mga0n895_4933_c1 3300050512 Bacteria 11069
207 nmdc:mga0rr50_146344_c1 3300050513 Bacteria 1905
208 nmdc:mga08x19_109_c1 3300050514 Bacteria 73421
209 nmdc:mga0a205_129448_c1 3300050515 Bacteria 2425
210 nmdc:mga0a205_283017_c1 3300050515 Unclassified 1534
211 Ga0500594_0035949 3300053118 Bacteria 1331
212 Ga0500559_0010648 3300053136 Unclassified 3943
213 Ga0500636_0019179 3300053177 Bacteria 4047
214 Ga0501084_0231227 3300054114 Unclassified 1561
215 Ga0466962_0010101 3300061719 Bacteria 4530

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300021361 Ga0213872_10002290 Ga0213872_100022908 255
2 3300013102 Ga0157371_10069611 Ga0157371_100696114 260
3 3300046543 Ga0495645_0000834 Ga0495645_0000834_18569_19354 260
4 3300036401 Ga0373937_0010944 Ga0373937_0010944_526_1503 268
5 3300046491 Ga0495584_0001267 Ga0495584_0001267_2608_3540 277
6 3300048920 Ga0496117_0028419 Ga0496117_0028419_2045_2959 277
7 3300048927 Ga0496124_0000775 Ga0496124_0000775_7788_8702 277
8 3300006358 Ga0068871_100159244 Ga0068871_1001592442 278
9 3300025913 Ga0207695_10076040 Ga0207695_100760404 278
10 3300025914 Ga0207671_10103429 Ga0207671_101034292 278
11 3300025924 Ga0207694_10048615 Ga0207694_100486152 278
12 3300005544 Ga0070686_100000040 Ga0070686_1000000405 279
13 3300009093 Ga0105240_10091289 Ga0105240_100912892 280
14 3300013104 Ga0157370_10001469 Ga0157370_1000146921 280
15 3300013105 Ga0157369_10009497 Ga0157369_1000949718 280
16 3300013307 Ga0157372_10149030 Ga0157372_101490302 280
17 3300025913 Ga0207695_10139659 Ga0207695_101396592 280
18 3300031691 Ga0316579_10075878 Ga0316579_100758782 280
19 3300031727 Ga0316576_10005582 Ga0316576_100055825 280
20 3300031728 Ga0316578_10003200 Ga0316578_100032005 280
21 3300031733 Ga0316577_10004592 Ga0316577_100045925 280
22 3300032133 Ga0316583_10032765 Ga0316583_100327652 280
23 3300032137 Ga0316585_10004619 Ga0316585_100046193 280
24 3300035398 Ga0316574_0003288 Ga0316574_0003288_5370_6290 280
25 3300036647 Ga0316582_0002279 Ga0316582_0002279_2215_3135 280
26 3300036712 Ga0316584_0007910 Ga0316584_0007910_5803_6723 280
27 3300003781 Ga0055536_1014617 Ga0055536_10146172 281
28 3300025292 Ga0209676_1010477 Ga0209676_10104773 281
29 3300025294 Ga0209025_1071310 Ga0209025_10713101 281
30 3300044684 Ga0466966_0194787 Ga0466966_0194787_56_988 283
31 3300049823 Ga0501044_0247297 Ga0501044_0247297_287_1165 284
32 3300041462 Ga0451806_197155 Ga0451806_197155_179_1120 285
33 3300031728 Ga0316578_10173487 Ga0316578_101734871 286
34 3300032139 Ga0316580_10007096 Ga0316580_100070962 286
35 3300035398 Ga0316574_0038491 Ga0316574_0038491_1216_2133 286
36 3300036647 Ga0316582_0020731 Ga0316582_0020731_383_1300 286
37 3300036712 Ga0316584_0028247 Ga0316584_0028247_1291_2208 286
38 3300044712 Ga0453684_0080201 Ga0453684_0080201_1968_2885 286
39 3300031548 Ga0307408_100108372 Ga0307408_1001083722 287
40 3300031824 Ga0307413_10190612 Ga0307413_101906122 287
41 3300042876 Ga0451577_0000246 Ga0451577_0000246_16117_17037 287
42 3300044673 Ga0453683_0012382 Ga0453683_0012382_892_1812 287
43 3300044712 Ga0453684_0000066 Ga0453684_0000066_16119_17039 287
44 3300045051 Ga0451576_0014017 Ga0451576_0014017_737_1657 287
45 3300046463 Ga0495653_0038724 Ga0495653_0038724_1415_2356 287
46 3300035083 Ga0373926_0010346 Ga0373926_0010346_1961_2890 288
47 3300035089 Ga0373944_0040772 Ga0373944_0040772_471_1400 288
48 3300035170 Ga0373943_0127862 Ga0373943_0127862_378_1307 288
49 3300035171 Ga0373946_0061783 Ga0373946_0061783_142_1071 288
50 3300037068 Ga0373925_0076547 Ga0373925_0076547_704_1633 288
51 3300046473 Ga0495582_0063529 Ga0495582_0063529_661_1590 288
52 3300046475 Ga0495639_0086998 Ga0495639_0086998_374_1303 288
53 3300047315 Ga0495581_0144185 Ga0495581_0144185_100_1029 288
54 3300035692 Ga0373935_0080941 Ga0373935_0080941_597_1526 289
55 3300035725 Ga0373947_0244695 Ga0373947_0244695_35_964 289
56 3300036712 Ga0316584_0239356 Ga0316584_0239356_106_1011 289
57 3300049591 Ga0501075_0057869 Ga0501075_0057869_1682_2551 289
58 3300005365 Ga0070688_100011950 Ga0070688_1000119501 290
59 3300025936 Ga0207670_10286432 Ga0207670_102864322 290
60 3300031548 Ga0307408_100000016 Ga0307408_100000016125 290
61 3300039438 Ga0436360_0054478 Ga0436360_0054478_902_1798 290
62 3300039447 Ga0436361_0445399 Ga0436361_0445399_513_1409 290
63 3300046529 Ga0495652_0005761 Ga0495652_0005761_1242_2144 290
64 3300005328 Ga0070676_10090745 Ga0070676_100907452 291
65 3300006844 Ga0075428_100113069 Ga0075428_1001130693 291
66 3300006847 Ga0075431_100143221 Ga0075431_1001432212 291
67 3300006852 Ga0075433_10148117 Ga0075433_101481171 291
68 3300006871 Ga0075434_100059601 Ga0075434_1000596012 291
69 3300006871 Ga0075434_100102127 Ga0075434_1001021272 291
70 3300006880 Ga0075429_100073605 Ga0075429_1000736052 291
71 3300009147 Ga0114129_10128892 Ga0114129_101288923 291
72 3300025907 Ga0207645_10096832 Ga0207645_100968321 291
73 3300042876 Ga0451577_0032063 Ga0451577_0032063_2831_3793 291
74 3300044712 Ga0453684_0059831 Ga0453684_0059831_2998_3960 291
75 3300050507 nmdc:mga05p37_185737_c1 nmdc:mga05p37_185737_c1_1496_2407 291
76 3300050508 nmdc:mga09592_32386_c1 nmdc:mga09592_32386_c1_1434_2345 291
77 3300050510 nmdc:mga06r32_47434_c1 nmdc:mga06r32_47434_c1_210_1121 291
78 3300050512 nmdc:mga0n895_40770_c1 nmdc:mga0n895_40770_c1_3180_4091 291
79 3300050513 nmdc:mga0rr50_146344_c1 nmdc:mga0rr50_146344_c1_594_1505 291
80 3300050515 nmdc:mga0a205_283017_c1 nmdc:mga0a205_283017_c1_449_1360 291
81 3300028800 Ga0265338_10154456 Ga0265338_101544562 292
82 3300044673 Ga0453683_0007735 Ga0453683_0007735_5398_6306 292
83 3300046460 Ga0495638_0076210 Ga0495638_0076210_1081_1998 292
84 3300046491 Ga0495584_0000880 Ga0495584_0000880_3741_4670 292
85 3300038725 Ga0400484_34213 Ga0400484_34213_173_1072 293
86 3300003323 rootH1_10011438 rootH1_100114383 294
87 3300046543 Ga0495645_0097288 Ga0495645_0097288_974_1879 295
88 3300013297 Ga0157378_10002626 Ga0157378_1000262614 296
89 3300013307 Ga0157372_10477538 Ga0157372_104775382 296
90 3300025944 Ga0207661_10093634 Ga0207661_100936343 296
91 3300048925 Ga0496122_0002365 Ga0496122_0002365_17685_18599 296
92 3300048926 Ga0496123_0001917 Ga0496123_0001917_8544_9458 296
93 3300049570 Ga0501033_0041869 Ga0501033_0041869_34_960 296
94 3300049581 Ga0501047_0077538 Ga0501047_0077538_2104_3030 296
95 3300049582 Ga0501048_0126399 Ga0501048_0126399_539_1465 296
96 3300049822 Ga0501035_0083919 Ga0501035_0083919_1740_2666 296
97 iso_pu_bacteria 2526164713 2527077863 296
98 3300005343 Ga0070687_100258014 Ga0070687_1002580141 297
99 3300005471 Ga0070698_100074152 Ga0070698_1000741524 297
100 3300005518 Ga0070699_100049676 Ga0070699_1000496762 297
101 3300025918 Ga0207662_10227337 Ga0207662_102273371 297
102 3300054114 Ga0501084_0231227 Ga0501084_0231227_614_1513 297
103 iso_pu_bacteria 2885270888 2885274080 297
104 3300005467 Ga0070706_100176130 Ga0070706_1001761304 298
105 3300005468 Ga0070707_100184139 Ga0070707_1001841394 298
106 3300025910 Ga0207684_10118996 Ga0207684_101189962 298
107 3300025922 Ga0207646_10164035 Ga0207646_101640352 298
108 3300042876 Ga0451577_0105235 Ga0451577_0105235_623_1531 298
109 3300044658 Ga0466972_0000842 Ga0466972_0000842_4362_5288 298
110 3300044659 Ga0466973_0073984 Ga0466973_0073984_718_1656 298
111 3300044673 Ga0453683_0010638 Ga0453683_0010638_2785_3693 298
112 3300044706 Ga0466964_0008819 Ga0466964_0008819_2716_3642 298
113 3300044712 Ga0453684_0004312 Ga0453684_0004312_5774_6682 298
114 3300044712 Ga0453684_0021084 Ga0453684_0021084_3627_4535 298
115 3300044712 Ga0453684_0203599 Ga0453684_0203599_1319_2224 298
116 iso_pu_bacteria 2904560550 2904563306 298
117 iso_pu_bacteria 2913939268 2913944522 298
118 3300006852 Ga0075433_10097691 Ga0075433_100976912 299
119 3300013296 Ga0157374_10335843 Ga0157374_103358432 299
120 3300031344 Ga0265316_10012389 Ga0265316_100123892 299
121 3300044683 Ga0466965_0004571 Ga0466965_0004571_457_1395 299
122 3300044719 Ga0466971_0040673 Ga0466971_0040673_574_1512 299
123 3300048921 Ga0496118_0001537 Ga0496118_0001537_15425_16363 299
124 3300050512 nmdc:mga0n895_4933_c1 nmdc:mga0n895_4933_c1_2306_3295 299
125 3300050515 nmdc:mga0a205_129448_c1 nmdc:mga0a205_129448_c1_919_1908 299
126 3300061719 Ga0466962_0010101 Ga0466962_0010101_2969_3907 299
127 iso_pu_bacteria 2643221635 2644198515 299
128 iso_pu_bacteria 2929177148 2929177539 299
129 iso_pu_bacteria 2945977869 2945979910 299
130 iso_pu_bacteria 2946013367 2946014228 299
131 3300028800 Ga0265338_10046596 Ga0265338_100465962 300
132 3300031344 Ga0265316_10018957 Ga0265316_100189572 300
133 3300031728 Ga0316578_10055245 Ga0316578_100552452 300
134 3300036712 Ga0316584_0007229 Ga0316584_0007229_2337_3242 300
135 3300046506 Ga0495583_0004410 Ga0495583_0004410_1092_2069 300
136 3300047472 Ga0495686_0000563 Ga0495686_0000563_33356_34264 300
137 3300005341 Ga0070691_10038667 Ga0070691_100386672 301
138 3300005563 Ga0068855_100619735 Ga0068855_1006197351 301
139 3300005577 Ga0068857_100005901 Ga0068857_10000590110 301
140 3300005614 Ga0068856_100035843 Ga0068856_1000358437 301
141 3300009093 Ga0105240_10218028 Ga0105240_102180282 301
142 3300009093 Ga0105240_10444289 Ga0105240_104442892 301
143 3300009174 Ga0105241_10155146 Ga0105241_101551462 301
144 3300009545 Ga0105237_10161568 Ga0105237_101615682 301
145 3300009545 Ga0105237_10372676 Ga0105237_103726762 301
146 3300009551 Ga0105238_10148347 Ga0105238_101483472 301
147 3300010375 Ga0105239_10004787 Ga0105239_1000478715 301
148 3300010375 Ga0105239_10136074 Ga0105239_101360742 301
149 3300013105 Ga0157369_10017409 Ga0157369_1001740913 301
150 3300013307 Ga0157372_10349052 Ga0157372_103490522 301
151 3300025911 Ga0207654_10248611 Ga0207654_102486112 301
152 3300026078 Ga0207702_10185706 Ga0207702_101857062 301
153 3300031711 Ga0265314_10089617 Ga0265314_100896172 301
154 3300035111 Ga0373923_0015637 Ga0373923_0015637_1698_2609 301
155 3300044712 Ga0453684_0004734 Ga0453684_0004734_11292_12200 301
156 3300044712 Ga0453684_0054112 Ga0453684_0054112_3782_4690 301
157 3300044712 Ga0453684_0082851 Ga0453684_0082851_387_1301 301
158 3300044712 Ga0453684_0112949 Ga0453684_0112949_2211_3125 301
159 3300053118 Ga0500594_0035949 Ga0500594_0035949_118_1029 301
160 iso_pu_bacteria 2511231026 2511385387 301
161 iso_pu_bacteria 2526164512 2526212461 301
162 iso_pu_bacteria 2643221581 2643914162 301
163 iso_pu_bacteria 8016583857 8016586755 301
164 3300003781 Ga0055536_1013202 Ga0055536_10132022 302
165 3300005458 Ga0070681_10174310 Ga0070681_101743101 302
166 3300005539 Ga0068853_100000427 Ga0068853_1000004272 302
167 3300005546 Ga0070696_100057967 Ga0070696_1000579672 302
168 3300005563 Ga0068855_100066362 Ga0068855_1000663622 302
169 3300005614 Ga0068856_100008717 Ga0068856_1000087179 302
170 3300006846 Ga0075430_100030925 Ga0075430_1000309255 302
171 3300006914 Ga0075436_100000277 Ga0075436_10000027728 302
172 3300010375 Ga0105239_10025744 Ga0105239_100257442 302
173 3300013104 Ga0157370_10261399 Ga0157370_102613992 302
174 3300014497 Ga0182008_10004690 Ga0182008_100046906 302
175 3300015262 Ga0182007_10002744 Ga0182007_100027442 302
176 3300021384 Ga0213876_10018854 Ga0213876_100188542 302
177 3300025292 Ga0209676_1000856 Ga0209676_100085631 302
178 3300025912 Ga0207707_10074983 Ga0207707_100749833 302
179 3300025932 Ga0207690_10028080 Ga0207690_100280802 302
180 3300025949 Ga0207667_10074964 Ga0207667_100749642 302
181 3300026041 Ga0207639_10003087 Ga0207639_100030873 302
182 3300026078 Ga0207702_10054392 Ga0207702_100543922 302
183 3300036401 Ga0373937_0014587 Ga0373937_0014587_3240_4310 302
184 3300036401 Ga0373937_0189602 Ga0373937_0189602_387_1301 302
185 3300039437 Ga0436365_0931782 Ga0436365_0931782_9402_10331 302
186 3300039447 Ga0436361_0403678 Ga0436361_0403678_12935_13885 302
187 3300044658 Ga0466972_0001529 Ga0466972_0001529_4628_5539 302
188 3300044712 Ga0453684_0054558 Ga0453684_0054558_877_1827 302
189 3300044712 Ga0453684_0193817 Ga0453684_0193817_1351_2268 302
190 3300044901 Ga0466960_0000413 Ga0466960_0000413_5070_5981 302
191 3300045051 Ga0451576_0056274 Ga0451576_0056274_435_1385 302
192 3300046472 Ga0495580_0282907 Ga0495580_0282907_111_1025 302
193 3300046517 Ga0495630_0192691 Ga0495630_0192691_410_1324 302
194 3300046542 Ga0495597_0006461 Ga0495597_0006461_4694_5644 302
195 3300046689 Ga0495613_0050641 Ga0495613_0050641_77_991 302
196 3300050514 nmdc:mga08x19_109_c1 nmdc:mga08x19_109_c1_44973_45905 302
197 3300005328 Ga0070676_10241577 Ga0070676_102415771 303
198 3300005366 Ga0070659_100114965 Ga0070659_1001149653 303
199 3300005440 Ga0070705_100066052 Ga0070705_1000660522 303
200 3300005985 Ga0081539_10079240 Ga0081539_100792402 303
201 3300009093 Ga0105240_10391009 Ga0105240_103910091 303
202 3300009545 Ga0105237_10185278 Ga0105237_101852781 303
203 3300025913 Ga0207695_10424595 Ga0207695_104245951 303
204 3300025919 Ga0207657_10283312 Ga0207657_102833121 303
205 3300025932 Ga0207690_10074303 Ga0207690_100743033 303
206 3300025933 Ga0207706_10018176 Ga0207706_100181763 303
207 3300039093 Ga0400489_80523 Ga0400489_80523_98_1012 303
208 3300039437 Ga0436365_1039967 Ga0436365_1039967_920_1849 303
209 3300039447 Ga0436361_0501696 Ga0436361_0501696_4279_5193 303
210 3300005329 Ga0070683_100110412 Ga0070683_1001104124 304
211 3300005440 Ga0070705_100221798 Ga0070705_1002217981 304
212 3300005536 Ga0070697_100088032 Ga0070697_1000880322 304
213 3300009551 Ga0105238_10152687 Ga0105238_101526872 304
214 3300044656 Ga0466969_0086372 Ga0466969_0086372_380_1312 304
215 3300045051 Ga0451576_0000237 Ga0451576_0000237_95531_96484 304
216 3300049571 Ga0501034_0001457 Ga0501034_0001457_22195_23115 304
217 3300003320 rootH2_10295419 rootH2_102954191 305
218 3300005336 Ga0070680_100260729 Ga0070680_1002607292 305
219 3300005530 Ga0070679_100092559 Ga0070679_1000925593 305
220 3300010375 Ga0105239_10003009 Ga0105239_100030091 305
221 3300010375 Ga0105239_10017789 Ga0105239_100177895 305
222 3300025921 Ga0207652_10069393 Ga0207652_100693933 305
223 3300044712 Ga0453684_0009893 Ga0453684_0009893_7735_8694 305
224 3300046507 Ga0495606_0002702 Ga0495606_0002702_1871_2803 305
225 3300048928 Ga0496125_0003987 Ga0496125_0003987_13065_14006 305
226 3300053136 Ga0500559_0010648 Ga0500559_0010648_1116_2066 305
227 3300053177 Ga0500636_0019179 Ga0500636_0019179_1767_2717 305

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14338

Mrr_N

Mrr N-terminal domain

46

132

0.99

PF04471

Mrr_cat

Restriction endonuclease

197

318

0.95

PF13156

Mrr_cat_2

Restriction endonuclease

223

330

0.87

PF22722

NA-iREase1

NACHT-associated inactive Restriction Endonuclease 1

205

316

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
5e38-assembly1.cif.gz_B structural basis of mapping the spontaneous mutations with 5-flourouracil in uracil phosphoribosyltransferase from mycobacterium tuberculosis 0.726 231 272
8him-assembly1.cif.gz_E a cryo-em structure of b. oleracea rna polymerase v elongation complex at 2.73 angstrom 0.7163 215 280
1cf7-assembly1.cif.gz_B structural basis of dna recognition by the heterodimeric cell cycle transcription factor e2f-dp 0.7089 5 81
3r6h-assembly1.cif.gz_A crystal structure of an enoyl-coa hydratase (echa3) from mycobacterium marinum 0.6983 213 248
1xtt-assembly1.cif.gz_D sulfolobus solfataricus uracil phosphoribosyltransferase in complex with uridine 5'-monophosphate (ump) 0.6969 217 272
ID Description Score Start End Superfamily
af_I6Y9K2_7_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9789 6 90 1.10.10.10
af_I6Y9K2_7_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9568 6 90 1.10.10.10
af_P24202_6_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9376 6 90 1.10.10.10
af_P24202_6_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9071 6 90 1.10.10.10
af_P24202_139_297_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.8653 135 295 3.40.1350.10
ID Description Score Start End GO Terms
AF-A0A2V8NEY3-F1-model_v4 Restriction endonuclease 0.9919 1 89 GO:0004519
AF-A0A7V7WHB1-F1-model_v4 Restriction endonuclease 0.9793 1 103 GO:0004519
AF-T0Y3W2-F1-model_v4 Mrr restriction system protein 0.9757 1 83
AF-A0A7W1UIA1-F1-model_v4 Restriction system protein Mrr-like N-terminal domain-containing protein 0.974 1 108
AF-A0A1I1QVM8-F1-model_v4 Restriction system protein 0.9683 1 305 GO:0003677
GO:0009307
GO:0015666

Feature Viewer

pLDDT pTM Quality
88.16 0.74 High
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Predicted Structure (AlphaFold2)

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