F340321

General Info

Members Datasets Scaffolds Average Seq Length
227 157 454 209

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0000070|Ga0496104_0000070_62783_63544
Length 226
Sequence MASARGAAKRGRRPPRLRGAALQKAMAHLAEADATLGQLIERYGTLPPEREGRPAHDDHYGALLRSITNQQLSVAAARTIYTRMLDRFGGRPPTPQEILADDPEDLRSVGLSRPKIGYLRSLAEHVIAGELELDRLDELSDERVIEELVAVKGLGEWTAHMFLMFQLERPDVLAPGDLGIRRAVERAYGLPEIPDRETMERLGERWRPHRTLACRYLWRSLENEPI

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
59 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
60 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
83 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
84 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
89 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
98 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
102 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
108 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
112 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
113 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
114 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
119 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
120 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
157 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0.44
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.88
Nodule 0
Rhizoplane 10.13
Rhizosphere 88.11
Stem 0
Stem Tuber 0
Unclassified 1.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0000070 3300048907 Bacteria 107129
2 Ga0070683_100021728 3300005329 Bacteria 5730
3 Ga0070683_100119972 3300005329 Bacteria 2484
4 Ga0070680_100408802 3300005336 Bacteria 1157
5 Ga0070692_10090906 3300005345 Bacteria 1659
6 Ga0070659_100588760 3300005366 Bacteria 955
7 Ga0070709_10383869 3300005434 Bacteria 1045
8 Ga0070714_100000611 3300005435 Bacteria 25542
9 Ga0070714_100147721 3300005435 Bacteria 2115
10 Ga0070713_100132619 3300005436 Bacteria 2198
11 Ga0070710_10000010 3300005437 Bacteria 141733
12 Ga0070710_10290344 3300005437 Bacteria 1064
13 Ga0070711_100019554 3300005439 Bacteria 4346
14 Ga0070711_100635246 3300005439 Bacteria 894
15 Ga0070711_100934213 3300005439 Bacteria 742
16 Ga0068867_100301922 3300005459 Bacteria 1320
17 Ga0070684_100090266 3300005535 Bacteria 2724
18 Ga0070684_100144950 3300005535 Bacteria 2149
19 Ga0070697_100721006 3300005536 Bacteria 880
20 Ga0068855_100015602 3300005563 Bacteria 9140
21 Ga0070664_100137927 3300005564 Bacteria 2146
22 Ga0070664_101130675 3300005564 Bacteria 738
23 Ga0068857_100340027 3300005577 Bacteria 1388
24 Ga0068857_100366047 3300005577 Bacteria 1337
25 Ga0068856_100171294 3300005614 Bacteria 2183
26 Ga0068852_100049654 3300005616 Bacteria 3590
27 Ga0068864_100131071 3300005618 Bacteria 2252
28 Ga0068864_100345844 3300005618 Bacteria 1402
29 Ga0081539_10160404 3300005985 Bacteria 1072
30 Ga0070717_10000017 3300006028 Bacteria 205340
31 Ga0075365_10044179 3300006038 Bacteria 2919
32 Ga0070716_100076557 3300006173 Bacteria 1983
33 Ga0070712_100000006 3300006175 Bacteria 161357
34 Ga0070712_100008010 3300006175 Bacteria 6627
35 Ga0075434_100483472 3300006871 Bacteria 1259
36 Ga0075435_100519674 3300007076 Unclassified 1030
37 Ga0105240_10008627 3300009093 Bacteria 14563
38 Ga0105240_10089134 3300009093 Bacteria 3774
39 Ga0105245_10127282 3300009098 Bacteria 2386
40 Ga0105245_10197503 3300009098 Bacteria 1930
41 Ga0105245_10955191 3300009098 Bacteria 900
42 Ga0105247_10223047 3300009101 Bacteria 1277
43 Ga0114129_10344070 3300009147 Bacteria 1977
44 Ga0105237_10006682 3300009545 Bacteria 12749
45 Ga0105238_10497607 3300009551 Bacteria 1219
46 Ga0105238_11104912 3300009551 Bacteria 816
47 Ga0105249_10637546 3300009553 Bacteria 1122
48 Ga0105246_10007548 3300011119 Bacteria 6672
49 Ga0157369_10604098 3300013105 Bacteria 1132
50 Ga0163162_10499027 3300013306 Bacteria 1347
51 Ga0163162_10687717 3300013306 Bacteria 1145
52 Ga0157372_10064866 3300013307 Bacteria 4099
53 Ga0207692_10000006 3300025898 Bacteria 294686
54 Ga0207685_10053437 3300025905 Bacteria 1569
55 Ga0207695_10020864 3300025913 Bacteria 7486
56 Ga0207671_10004789 3300025914 Bacteria 12752
57 Ga0207693_10000078 3300025915 Bacteria 86652
58 Ga0207693_10048970 3300025915 Bacteria 3318
59 Ga0207693_10063192 3300025915 Bacteria 2901
60 Ga0207663_10014460 3300025916 Bacteria 4321
61 Ga0207663_10128736 3300025916 Bacteria 1745
62 Ga0207681_10005147 3300025923 Bacteria 8034
63 Ga0207687_10014919 3300025927 Bacteria 5089
64 Ga0207700_10461707 3300025928 Bacteria 1120
65 Ga0207664_10000020 3300025929 Bacteria 218362
66 Ga0207664_10072858 3300025929 Bacteria 2771
67 Ga0207664_10100106 3300025929 Bacteria 2393
68 Ga0207690_10000078 3300025932 Bacteria 84537
69 Ga0207690_10334321 3300025932 Bacteria 1194
70 Ga0207706_10000137 3300025933 Bacteria 79758
71 Ga0207661_10261591 3300025944 Bacteria 1541
72 Ga0207679_10217609 3300025945 Bacteria 1605
73 Ga0207679_10877672 3300025945 Bacteria 820
74 Ga0207667_10033548 3300025949 Bacteria 5518
75 Ga0207712_10448581 3300025961 Bacteria 1093
76 Ga0207677_10000903 3300026023 Bacteria 16635
77 Ga0207677_10358325 3300026023 Bacteria 1224
78 Ga0207702_10107326 3300026078 Bacteria 2476
79 Ga0207674_10042372 3300026116 Bacteria 4702
80 Ga0207674_10442135 3300026116 Bacteria 1257
81 Ga0207675_100885707 3300026118 Bacteria 908
82 Ga0265337_1003691 3300028556 Bacteria 6555
83 Ga0265337_1014491 3300028556 Bacteria 2613
84 Ga0265326_10000212 3300028558 Bacteria 28661
85 Ga0265319_1000215 3300028563 Bacteria 43681
86 Ga0265319_1000296 3300028563 Bacteria 37027
87 Ga0265319_1001081 3300028563 Bacteria 16941
88 Ga0265318_10000398 3300028577 Bacteria 34001
89 Ga0265318_10000919 3300028577 Bacteria 19143
90 Ga0265336_10000001 3300028666 Bacteria 916179
91 Ga0265338_10000532 3300028800 Bacteria 66760
92 Ga0265338_10053206 3300028800 Bacteria 3624
93 Ga0265324_10003301 3300029957 Bacteria 7752
94 Ga0265320_10016696 3300031240 Bacteria 4107
95 Ga0265320_10105102 3300031240 Bacteria 1298
96 Ga0265340_10000002 3300031247 Bacteria 711693
97 Ga0265339_10060037 3300031249 Bacteria 2050
98 Ga0265327_10025536 3300031251 Bacteria 3442
99 Ga0265316_10098129 3300031344 Bacteria 2229
100 Ga0265313_10100154 3300031595 Bacteria 1287
101 Ga0265314_10059017 3300031711 Bacteria 2627
102 Ga0265342_10024956 3300031712 Bacteria 3766
103 Ga0307413_10550436 3300031824 Bacteria 936
104 Ga0373958_0079607 3300034819 Bacteria 740
105 Ga0373953_0119195 3300035117 Bacteria 1120
106 Ga0373937_0146792 3300036401 Bacteria 2208
107 Ga0373937_0407411 3300036401 Bacteria 1290
108 Ga0436364_1087852 3300037853 Bacteria 3765
109 Ga0436365_1281697 3300039437 Bacteria 935
110 Ga0466966_0254857 3300044684 Bacteria 1057
111 Ga0466961_0198422 3300044693 Bacteria 1242
112 Ga0466963_0006143 3300044694 Bacteria 7087
113 Ga0466963_0158345 3300044694 Bacteria 1575
114 Ga0466964_0107888 3300044706 Bacteria 1238
115 Ga0466971_0218497 3300044719 Bacteria 903
116 Ga0466968_0061164 3300044735 Bacteria 1624
117 Ga0466957_0242036 3300044842 Unclassified 1197
118 Ga0466960_0009384 3300044901 Bacteria 4031
119 Ga0466960_0039175 3300044901 Bacteria 2234
120 Ga0466960_0061554 3300044901 Bacteria 1843
121 Ga0466959_0000359 3300045049 Bacteria 26972
122 Ga0466959_0010383 3300045049 Bacteria 6654
123 Ga0466959_0048845 3300045049 Bacteria 3109
124 Ga0466959_0405079 3300045049 Bacteria 927
125 Ga0466958_0000626 3300045836 Bacteria 15147
126 Ga0466958_0179501 3300045836 Bacteria 1343
127 Ga0466958_0316318 3300045836 Bacteria 1003
128 Ga0466967_0010049 3300045976 Bacteria 7071
129 Ga0466967_0024200 3300045976 Bacteria 4989
130 Ga0466967_0247451 3300045976 Bacteria 1702
131 Ga0495592_0050481 3300046454 Bacteria 3091
132 Ga0495603_0000083 3300046455 Bacteria 42311
133 Ga0495629_0117383 3300046459 Bacteria 1854
134 Ga0495641_0003303 3300046461 Bacteria 12169
135 Ga0495653_0003139 3300046463 Bacteria 13240
136 Ga0495608_0007423 3300046511 Bacteria 7745
137 Ga0495630_0003770 3300046517 Bacteria 10586
138 Ga0495630_0460772 3300046517 Bacteria 974
139 Ga0495631_0017312 3300046518 Bacteria 3413
140 Ga0495644_0006935 3300046523 Bacteria 4385
141 Ga0495652_0180178 3300046529 Bacteria 1622
142 Ga0495587_0337517 3300046536 Bacteria 841
143 Ga0495621_0005663 3300046539 Bacteria 3605
144 Ga0495645_0000050 3300046543 Bacteria 87415
145 Ga0495645_0001809 3300046543 Bacteria 14530
146 Ga0495667_0050705 3300046559 Bacteria 2739
147 Ga0495667_0417878 3300046559 Unclassified 844
148 Ga0495656_0004763 3300046615 Bacteria 4664
149 Ga0495635_0117197 3300046663 Bacteria 1817
150 Ga0495635_0183666 3300046663 Bacteria 1421
151 Ga0495635_0438665 3300046663 Bacteria 864
152 Ga0495657_0000011 3300046675 Bacteria 207360
153 Ga0495646_0024934 3300046680 Bacteria 3763
154 Ga0495647_0079824 3300046681 Bacteria 1325
155 Ga0495658_0012567 3300046683 Bacteria 4294
156 Ga0495613_0164635 3300046689 Bacteria 1576
157 Ga0495670_0117225 3300046691 Bacteria 1382
158 Ga0495671_0169715 3300046692 Bacteria 1061
159 Ga0495600_0058875 3300046809 Bacteria 2509
160 Ga0495604_0000636 3300047317 Bacteria 30130
161 Ga0495604_0001400 3300047317 Bacteria 19762
162 Ga0495674_0320272 3300047319 Bacteria 1263
163 Ga0495674_0661623 3300047319 Bacteria 823
164 Ga0495676_0616151 3300047321 Unclassified 706
165 Ga0495680_0013483 3300047322 Bacteria 7130
166 Ga0495683_0310257 3300047323 Bacteria 675
167 Ga0495673_0047763 3300047469 Bacteria 1890
168 Ga0495681_0106135 3300047470 Bacteria 1221
169 Ga0495684_0001131 3300047471 Bacteria 21483
170 Ga0495684_0043729 3300047471 Bacteria 3430
171 Ga0495684_0079178 3300047471 Bacteria 2495
172 Ga0495593_0048071 3300047673 Bacteria 2268
173 Ga0495602_0067418 3300048088 Bacteria 3079
174 Ga0496100_0000226 3300048903 Bacteria 30341
175 Ga0496100_0026836 3300048903 Bacteria 3535
176 Ga0496100_0269701 3300048903 Bacteria 1265
177 Ga0496101_0000492 3300048904 Bacteria 24919
178 Ga0496102_0201553 3300048905 Bacteria 1876
179 Ga0496104_0372671 3300048907 Bacteria 1340
180 Ga0496105_0550552 3300048908 Bacteria 900
181 Ga0496108_0085874 3300048911 Bacteria 2671
182 Ga0496109_0002320 3300048912 Bacteria 15849
183 Ga0496109_0079248 3300048912 Bacteria 3026
184 Ga0496110_0000328 3300048913 Bacteria 31640
185 Ga0496110_0188238 3300048913 Bacteria 1874
186 Ga0496111_0000040 3300048914 Bacteria 51054
187 Ga0496111_0036354 3300048914 Bacteria 3521
188 Ga0496111_0329560 3300048914 Bacteria 1130
189 Ga0496112_0000209 3300048915 Bacteria 38008
190 Ga0496112_0065399 3300048915 Bacteria 3588
191 Ga0496112_0107465 3300048915 Bacteria 2760
192 Ga0496113_0168728 3300048916 Bacteria 1733
193 Ga0496115_0000290 3300048918 Bacteria 43459
194 Ga0496115_0000320 3300048918 Bacteria 40940
195 Ga0496115_0004186 3300048918 Bacteria 10427
196 Ga0501036_0628466 3300049572 Bacteria 890
197 Ga0501039_0157089 3300049575 Bacteria 1787
198 Ga0501039_0713436 3300049575 Bacteria 784
199 Ga0501040_0412515 3300049576 Bacteria 970
200 Ga0501041_0100045 3300049577 Bacteria 1794
201 Ga0501042_0074315 3300049578 Bacteria 2432
202 Ga0501046_0276006 3300049580 Bacteria 1232
203 Ga0501046_0513029 3300049580 Bacteria 858
204 Ga0501072_0665098 3300049588 Bacteria 819
205 Ga0501074_0339095 3300049590 Bacteria 1067
206 Ga0501075_0762154 3300049591 Bacteria 737
207 Ga0501076_0024790 3300049592 Bacteria 4639
208 Ga0501076_0285401 3300049592 Bacteria 1352
209 Ga0501079_0037785 3300049741 Bacteria 3722
210 Ga0501079_0192734 3300049741 Bacteria 1591
211 Ga0501080_0113915 3300049742 Bacteria 2507
212 Ga0501081_0021905 3300049743 Bacteria 4270
213 Ga0501081_0191098 3300049743 Bacteria 1483
214 Ga0501081_0447531 3300049743 Bacteria 959
215 Ga0501045_0240280 3300049824 Bacteria 1348
216 nmdc:mga00v17_113240_c1 3300050491 Bacteria 1722
217 nmdc:mga09592_3437_c1 3300050508 Bacteria 12787
218 nmdc:mga0n895_592158_c1 3300050512 Bacteria 1112
219 nmdc:mga0rr50_230569_c1 3300050513 Bacteria 1532
220 nmdc:mga0rr50_354508_c1 3300050513 Bacteria 1234
221 Ga0495601_0001623 3300053077 Bacteria 12376
222 Ga0495601_0023555 3300053077 Bacteria 3784
223 Ga0495601_0083952 3300053077 Bacteria 2046
224 Ga0495612_0000034 3300053078 Bacteria 73096
225 Ga0495595_0035199 3300053084 Bacteria 2268
226 Ga0495619_0243799 3300053085 Bacteria 1245
227 Ga0587091_006501 3300059511 Bacteria 1645
228 Ga0496104_0000070
229 Ga0070683_100021728
230 Ga0070683_100119972
231 Ga0070680_100408802
232 Ga0070692_10090906
233 Ga0070659_100588760
234 Ga0070709_10383869
235 Ga0070714_100000611
236 Ga0070714_100147721
237 Ga0070713_100132619
238 Ga0070710_10000010
239 Ga0070710_10290344
240 Ga0070711_100019554
241 Ga0070711_100635246
242 Ga0070711_100934213
243 Ga0068867_100301922
244 Ga0070684_100090266
245 Ga0070684_100144950
246 Ga0070697_100721006
247 Ga0068855_100015602
248 Ga0070664_100137927
249 Ga0070664_101130675
250 Ga0068857_100340027
251 Ga0068857_100366047
252 Ga0068856_100171294
253 Ga0068852_100049654
254 Ga0068864_100131071
255 Ga0068864_100345844
256 Ga0081539_10160404
257 Ga0070717_10000017
258 Ga0075365_10044179
259 Ga0070716_100076557
260 Ga0070712_100000006
261 Ga0070712_100008010
262 Ga0075434_100483472
263 Ga0075435_100519674
264 Ga0105240_10008627
265 Ga0105240_10089134
266 Ga0105245_10127282
267 Ga0105245_10197503
268 Ga0105245_10955191
269 Ga0105247_10223047
270 Ga0114129_10344070
271 Ga0105237_10006682
272 Ga0105238_10497607
273 Ga0105238_11104912
274 Ga0105249_10637546
275 Ga0105246_10007548
276 Ga0157369_10604098
277 Ga0163162_10499027
278 Ga0163162_10687717
279 Ga0157372_10064866
280 Ga0207692_10000006
281 Ga0207685_10053437
282 Ga0207695_10020864
283 Ga0207671_10004789
284 Ga0207693_10000078
285 Ga0207693_10048970
286 Ga0207693_10063192
287 Ga0207663_10014460
288 Ga0207663_10128736
289 Ga0207681_10005147
290 Ga0207687_10014919
291 Ga0207700_10461707
292 Ga0207664_10000020
293 Ga0207664_10072858
294 Ga0207664_10100106
295 Ga0207690_10000078
296 Ga0207690_10334321
297 Ga0207706_10000137
298 Ga0207661_10261591
299 Ga0207679_10217609
300 Ga0207679_10877672
301 Ga0207667_10033548
302 Ga0207712_10448581
303 Ga0207677_10000903
304 Ga0207677_10358325
305 Ga0207702_10107326
306 Ga0207674_10042372
307 Ga0207674_10442135
308 Ga0207675_100885707
309 Ga0265337_1003691
310 Ga0265337_1014491
311 Ga0265326_10000212
312 Ga0265319_1000215
313 Ga0265319_1000296
314 Ga0265319_1001081
315 Ga0265318_10000398
316 Ga0265318_10000919
317 Ga0265336_10000001
318 Ga0265338_10000532
319 Ga0265338_10053206
320 Ga0265324_10003301
321 Ga0265320_10016696
322 Ga0265320_10105102
323 Ga0265340_10000002
324 Ga0265339_10060037
325 Ga0265327_10025536
326 Ga0265316_10098129
327 Ga0265313_10100154
328 Ga0265314_10059017
329 Ga0265342_10024956
330 Ga0307413_10550436
331 Ga0373958_0079607
332 Ga0373953_0119195
333 Ga0373937_0146792
334 Ga0373937_0407411
335 Ga0436364_1087852
336 Ga0436365_1281697
337 Ga0466966_0254857
338 Ga0466961_0198422
339 Ga0466963_0006143
340 Ga0466963_0158345
341 Ga0466964_0107888
342 Ga0466971_0218497
343 Ga0466968_0061164
344 Ga0466957_0242036
345 Ga0466960_0009384
346 Ga0466960_0039175
347 Ga0466960_0061554
348 Ga0466959_0000359
349 Ga0466959_0010383
350 Ga0466959_0048845
351 Ga0466959_0405079
352 Ga0466958_0000626
353 Ga0466958_0179501
354 Ga0466958_0316318
355 Ga0466967_0010049
356 Ga0466967_0024200
357 Ga0466967_0247451
358 Ga0495592_0050481
359 Ga0495603_0000083
360 Ga0495629_0117383
361 Ga0495641_0003303
362 Ga0495653_0003139
363 Ga0495608_0007423
364 Ga0495630_0003770
365 Ga0495630_0460772
366 Ga0495631_0017312
367 Ga0495644_0006935
368 Ga0495652_0180178
369 Ga0495587_0337517
370 Ga0495621_0005663
371 Ga0495645_0000050
372 Ga0495645_0001809
373 Ga0495667_0050705
374 Ga0495667_0417878
375 Ga0495656_0004763
376 Ga0495635_0117197
377 Ga0495635_0183666
378 Ga0495635_0438665
379 Ga0495657_0000011
380 Ga0495646_0024934
381 Ga0495647_0079824
382 Ga0495658_0012567
383 Ga0495613_0164635
384 Ga0495670_0117225
385 Ga0495671_0169715
386 Ga0495600_0058875
387 Ga0495604_0000636
388 Ga0495604_0001400
389 Ga0495674_0320272
390 Ga0495674_0661623
391 Ga0495676_0616151
392 Ga0495680_0013483
393 Ga0495683_0310257
394 Ga0495673_0047763
395 Ga0495681_0106135
396 Ga0495684_0001131
397 Ga0495684_0043729
398 Ga0495684_0079178
399 Ga0495593_0048071
400 Ga0495602_0067418
401 Ga0496100_0000226
402 Ga0496100_0026836
403 Ga0496100_0269701
404 Ga0496101_0000492
405 Ga0496102_0201553
406 Ga0496104_0372671
407 Ga0496105_0550552
408 Ga0496108_0085874
409 Ga0496109_0002320
410 Ga0496109_0079248
411 Ga0496110_0000328
412 Ga0496110_0188238
413 Ga0496111_0000040
414 Ga0496111_0036354
415 Ga0496111_0329560
416 Ga0496112_0000209
417 Ga0496112_0065399
418 Ga0496112_0107465
419 Ga0496113_0168728
420 Ga0496115_0000290
421 Ga0496115_0000320
422 Ga0496115_0004186
423 Ga0501036_0628466
424 Ga0501039_0157089
425 Ga0501039_0713436
426 Ga0501040_0412515
427 Ga0501041_0100045
428 Ga0501042_0074315
429 Ga0501046_0276006
430 Ga0501046_0513029
431 Ga0501072_0665098
432 Ga0501074_0339095
433 Ga0501075_0762154
434 Ga0501076_0024790
435 Ga0501076_0285401
436 Ga0501079_0037785
437 Ga0501079_0192734
438 Ga0501080_0113915
439 Ga0501081_0021905
440 Ga0501081_0191098
441 Ga0501081_0447531
442 Ga0501045_0240280
443 nmdc:mga00v17_113240_c1
444 nmdc:mga09592_3437_c1
445 nmdc:mga0n895_592158_c1
446 nmdc:mga0rr50_230569_c1
447 nmdc:mga0rr50_354508_c1
448 Ga0495601_0001623
449 Ga0495601_0023555
450 Ga0495601_0083952
451 Ga0495612_0000034
452 Ga0495595_0035199
453 Ga0495619_0243799
454 Ga0587091_006501

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

64

208

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yg9-assembly2.cif.gz_B structure of an unusual 3-methyladenine dna glycosylase ii (alka) from deinococcus radiodurans 0.8985 9 211
4b21-assembly1.cif.gz_A unprecedented sculpting of dna at abasic sites by dna glycosylase homolog mag2 0.8928 4 204
4b21-assembly1.cif.gz_A unprecedented sculpting of dna at abasic sites by dna glycosylase homolog mag2 0.8649 4 204
2h56-assembly2.cif.gz_B crystal structure of dna-3-methyladenine glycosidase (10174367) from bacillus halodurans at 2.55 a resolution 0.8643 10 213
2yg9-assembly2.cif.gz_B structure of an unusual 3-methyladenine dna glycosylase ii (alka) from deinococcus radiodurans 0.8361 9 211
ID Description Score Start End Superfamily
af_B4FZ58_120_231_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9687 40 149 1.10.340.30
2h56B02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9509 36 149 1.10.340.30
af_B4FZ58_120_231_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9436 40 149 1.10.340.30
2h56B02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9427 36 149 1.10.340.30
af_P22134_82_201_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9216 38 149 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A533WZR4-F1-model_v4 DNA-3-methyladenine glycosylase 2 family protein 0.9848 40 203 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A7W1QI45-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.984 1 205 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A2H1FH34-F1-model_v4 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC 3.2.2.21) 0.9796 8 204 GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
GO:0052821
GO:0052822
GO:1990053
AF-A0A842Q5L8-F1-model_v4 DNA-3-methyladenine glycosylase 2 family protein 0.9789 10 203 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A7V8W739-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9789 22 203 GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916

Map