F340335

General Info

Members Datasets Scaffolds Average Seq Length
227 137 454 549

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0004693|Ga0496121_0004693_1538_3334
Length 598
Sequence MAFRALQASLSLRGETARKSRFSARQTLMTINIQGRTKTDGAAQARRAFLLVQAAKACVGAALGIAFFGLVGRPDAAELIAMAGLVSPALLALLALTPIPLARLEQIGLAGFAALIGYLALLTGGMASPLLVWFALVPAEAALAGGRPAVVRAGLAAGAALVAVAVIEALGALPPSRLTLPAWEVYTCSMLAALVQAVLIAASAQDRQRAADAAAAEGAAMYRFLADNAMDLITRHAPDGRIRFASPATMALLGRLPDEVVGLAMPSLLHPDDLDVVQAALMQSSYHGRDGAAEVRLRHKDGRYVWAEIRCRPARENGDIVAVTRDISERKLQERALVDARDAALDANRAKSRFLANMSHELRTPLNAIIGFSEVMTREMFGPVGPRYQEYSRLIHESGAHLLDLINSVLDMSKIEAGKFELQEELFELEDAVESAVRFLRIPAERAGVALRMEVAPGARLVFADRRAVKQILVNLLSNGVKYTLPGGAVTVRAGLGGETARGVEITVSDTGTGISQADLARLGQPFEQVETAEVRAKEGTGLGLALVKSLAAMHGGEALLASALGEGTTVTVRLPHAAVNAQGERLSTAKVIPFRAA

Samples

Sample ID Description Type Environment
1 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
100 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
106 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
107 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
133 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
134 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
135 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
136 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.96
Nodule 0
Rhizoplane 0
Rhizosphere 92.51
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496121_0004693 3300048924 Bacteria 18106
2 JGI25165J46597_1000017 3300003214 Bacteria 377013
3 JGI25153J46596_10000392 3300003215 Bacteria 29639
4 rootH2_10018950 3300003320 Bacteria 32131
5 Ga0070683_100163516 3300005329 Bacteria 2111
6 Ga0070680_100000073 3300005336 Bacteria 53790
7 Ga0070660_100001465 3300005339 Bacteria 16151
8 Ga0070691_10000613 3300005341 Bacteria 13702
9 Ga0070661_100010990 3300005344 Bacteria 6309
10 Ga0070659_100012880 3300005366 Bacteria 6216
11 Ga0070667_100009310 3300005367 Bacteria 8141
12 Ga0070709_10000336 3300005434 Bacteria 29301
13 Ga0070713_100000086 3300005436 Bacteria 58784
14 Ga0070710_10036207 3300005437 Bacteria 2697
15 Ga0070711_100002165 3300005439 Bacteria 11143
16 Ga0070678_100010804 3300005456 Bacteria 5597
17 Ga0070678_100013795 3300005456 Bacteria 5076
18 Ga0070681_10000132 3300005458 Bacteria 56403
19 Ga0068867_100010005 3300005459 Bacteria 6683
20 Ga0068867_100012866 3300005459 Bacteria 5922
21 Ga0070679_100001077 3300005530 Bacteria 23835
22 Ga0070679_100010011 3300005530 Bacteria 8976
23 Ga0070684_100113704 3300005535 Bacteria 2429
24 Ga0068853_100002067 3300005539 Bacteria 14881
25 Ga0070693_100024281 3300005547 Bacteria 3249
26 Ga0070665_100001230 3300005548 Bacteria 31100
27 Ga0068855_100000114 3300005563 Bacteria 100372
28 Ga0068855_100013225 3300005563 Bacteria 9955
29 Ga0068855_100014070 3300005563 Bacteria 9644
30 Ga0068855_100020282 3300005563 Bacteria 7977
31 Ga0070664_100062475 3300005564 Bacteria 3175
32 Ga0068857_100006942 3300005577 Bacteria 9745
33 Ga0068856_100000156 3300005614 Bacteria 70385
34 Ga0068856_100015935 3300005614 Bacteria 7267
35 Ga0068852_100006200 3300005616 Bacteria 8625
36 Ga0068852_100012201 3300005616 Bacteria 6512
37 Ga0068852_100078751 3300005616 Bacteria 2916
38 Ga0068858_100071102 3300005842 Bacteria 3226
39 Ga0068860_100049818 3300005843 Bacteria 3988
40 Ga0070712_100000282 3300006175 Bacteria 28632
41 Ga0070712_100000296 3300006175 Bacteria 27988
42 Ga0097621_100000399 3300006237 Bacteria 30221
43 Ga0068871_100000342 3300006358 Bacteria 32312
44 Ga0068871_100003282 3300006358 Bacteria 11098
45 Ga0068865_100001888 3300006881 Bacteria 12320
46 Ga0075436_100000365 3300006914 Bacteria 28906
47 Ga0075436_100016931 3300006914 Bacteria 4988
48 Ga0075435_100078185 3300007076 Bacteria 2713
49 Ga0105240_10000174 3300009093 Bacteria 131157
50 Ga0105240_10014828 3300009093 Bacteria 10623
51 Ga0105240_10029543 3300009093 Bacteria 7139
52 Ga0105245_10050529 3300009098 Bacteria 3727
53 Ga0105243_10019446 3300009148 Bacteria 5149
54 Ga0105242_10017895 3300009176 Bacteria 5532
55 Ga0105242_10037461 3300009176 Bacteria 3896
56 Ga0105248_10000009 3300009177 Bacteria 403549
57 Ga0105248_10011886 3300009177 Bacteria 9604
58 Ga0105237_10003958 3300009545 Bacteria 17341
59 Ga0105238_10006389 3300009551 Bacteria 11726
60 Ga0105238_10056336 3300009551 Bacteria 3944
61 Ga0105238_10148271 3300009551 Bacteria 2322
62 Ga0105249_10040804 3300009553 Bacteria 4217
63 Ga0105239_10001145 3300010375 Bacteria 36502
64 Ga0105239_10014767 3300010375 Bacteria 8662
65 Ga0105239_10023274 3300010375 Bacteria 6825
66 Ga0105239_10023816 3300010375 Bacteria 6742
67 Ga0157370_10010632 3300013104 Bacteria 9686
68 Ga0157369_10001206 3300013105 Bacteria 32203
69 Ga0157369_10034827 3300013105 Bacteria 5523
70 Ga0157369_10060991 3300013105 Bacteria 4067
71 Ga0157378_10032417 3300013297 Bacteria 4617
72 Ga0157378_10154570 3300013297 Bacteria 2140
73 Ga0163162_10014482 3300013306 Bacteria 7706
74 Ga0163162_10194573 3300013306 Bacteria 2156
75 Ga0157372_10039374 3300013307 Bacteria 5216
76 Ga0157372_10156510 3300013307 Bacteria 2632
77 Ga0157379_10000713 3300014968 Bacteria 26943
78 Ga0157379_10003798 3300014968 Bacteria 12867
79 Ga0157376_10030584 3300014969 Bacteria 4301
80 Ga0213876_10000381 3300021384 Bacteria 37556
81 Ga0209233_1000006 3300025261 Bacteria 1473685
82 Ga0209233_1000892 3300025261 Bacteria 13043
83 Ga0209758_1000008 3300025297 Bacteria 1215263
84 Ga0207680_10015062 3300025903 Bacteria 4024
85 Ga0207680_10050915 3300025903 Bacteria 2474
86 Ga0207699_10000256 3300025906 Bacteria 29507
87 Ga0207705_10000345 3300025909 Bacteria 41860
88 Ga0207654_10021793 3300025911 Bacteria 3411
89 Ga0207707_10000002 3300025912 Bacteria 1142054
90 Ga0207707_10001115 3300025912 Bacteria 25507
91 Ga0207695_10000004 3300025913 Bacteria 1288665
92 Ga0207695_10016298 3300025913 Bacteria 8702
93 Ga0207695_10097084 3300025913 Bacteria 2948
94 Ga0207671_10009462 3300025914 Bacteria 8145
95 Ga0207693_10000150 3300025915 Bacteria 64061
96 Ga0207693_10000169 3300025915 Bacteria 58960
97 Ga0207693_10076805 3300025915 Bacteria 2615
98 Ga0207660_10000069 3300025917 Bacteria 53883
99 Ga0207660_10002476 3300025917 Bacteria 12137
100 Ga0207657_10000333 3300025919 Bacteria 49989
101 Ga0207649_10010626 3300025920 Bacteria 5062
102 Ga0207652_10000163 3300025921 Bacteria 72106
103 Ga0207652_10001135 3300025921 Bacteria 23975
104 Ga0207694_10000015 3300025924 Bacteria 363898
105 Ga0207687_10039565 3300025927 Bacteria 3229
106 Ga0207700_10000005 3300025928 Bacteria 394836
107 Ga0207664_10010775 3300025929 Bacteria 6467
108 Ga0207690_10031413 3300025932 Bacteria 3397
109 Ga0207686_10013465 3300025934 Bacteria 4527
110 Ga0207686_10050921 3300025934 Bacteria 2578
111 Ga0207709_10002179 3300025935 Bacteria 12511
112 Ga0207711_10000003 3300025941 Bacteria 1042791
113 Ga0207711_10000005 3300025941 Bacteria 822972
114 Ga0207711_10000009 3300025941 Bacteria 580864
115 Ga0207711_10000015 3300025941 Bacteria 494097
116 Ga0207667_10000012 3300025949 Bacteria 445492
117 Ga0207667_10015577 3300025949 Bacteria 8627
118 Ga0207658_10105529 3300025986 Bacteria 2216
119 Ga0207677_10052293 3300026023 Bacteria 2775
120 Ga0207639_10022803 3300026041 Bacteria 4513
121 Ga0207702_10000055 3300026078 Bacteria 136325
122 Ga0207702_10016334 3300026078 Bacteria 6144
123 Ga0207674_10012229 3300026116 Bacteria 9601
124 Ga0207675_100111106 3300026118 Bacteria 2586
125 Ga0207683_10036263 3300026121 Bacteria 4293
126 Ga0207698_10005904 3300026142 Bacteria 7609
127 Ga0207698_10084209 3300026142 Bacteria 2577
128 Ga0268266_10000930 3300028379 Bacteria 37406
129 Ga0268266_10104360 3300028379 Bacteria 2502
130 Ga0268264_10101932 3300028381 Bacteria 2497
131 Ga0265318_10000326 3300028577 Bacteria 38049
132 Ga0265338_10000007 3300028800 Bacteria 498229
133 Ga0265338_10026967 3300028800 Bacteria 5778
134 Ga0265332_10005958 3300031238 Bacteria 5574
135 Ga0265320_10002374 3300031240 Bacteria 13161
136 Ga0265325_10000001 3300031241 Bacteria 726814
137 Ga0265325_10001056 3300031241 Bacteria 19795
138 Ga0265325_10004104 3300031241 Bacteria 9278
139 Ga0265340_10018353 3300031247 Bacteria 3609
140 Ga0265339_10000206 3300031249 Bacteria 48417
141 Ga0265339_10000607 3300031249 Bacteria 27911
142 Ga0265339_10018417 3300031249 Bacteria 4117
143 Ga0265316_10016778 3300031344 Bacteria 6340
144 Ga0265316_10100036 3300031344 Bacteria 2205
145 Ga0265313_10001083 3300031595 Bacteria 26319
146 Ga0265313_10002647 3300031595 Bacteria 15220
147 Ga0265313_10004891 3300031595 Bacteria 10050
148 Ga0265313_10027073 3300031595 Bacteria 3007
149 Ga0265314_10000522 3300031711 Bacteria 49570
150 Ga0265314_10006427 3300031711 Bacteria 10409
151 Ga0265314_10017638 3300031711 Bacteria 5595
152 Ga0265342_10002579 3300031712 Bacteria 15521
153 Ga0265342_10007364 3300031712 Bacteria 8072
154 Ga0307516_10084313 3300031730 Bacteria 3017
155 Ga0373934_0014212 3300035086 Bacteria 3016
156 Ga0373956_0020981 3300035119 Bacteria 2785
157 Ga0373927_0099199 3300035695 Bacteria 1894
158 Ga0436365_1242687 3300039437 Bacteria 2566
159 Ga0436365_1464499 3300039437 Bacteria 56762
160 Ga0436363_1243392 3300039450 Bacteria 5654
161 Ga0495580_0031198 3300046472 Bacteria 3854
162 Ga0495609_0020918 3300046538 Bacteria 3019
163 Ga0495645_0031295 3300046543 Bacteria 3877
164 Ga0495622_0000443 3300046557 Bacteria 26751
165 Ga0496126_0001436 3300048929 Bacteria 37382
166 Ga0495682_0004635 3300049460 Bacteria 5834
167 Ga0501031_0015900 3300049568 Bacteria 4886
168 Ga0501032_0016652 3300049569 Bacteria 5169
169 Ga0501032_0031648 3300049569 Bacteria 3626
170 Ga0501032_0056348 3300049569 Bacteria 2642
171 Ga0501033_0002034 3300049570 Bacteria 17584
172 Ga0501033_0016165 3300049570 Bacteria 5651
173 Ga0501033_0096907 3300049570 Bacteria 2155
174 Ga0501034_0022411 3300049571 Bacteria 6436
175 Ga0501034_0143087 3300049571 Bacteria 2370
176 Ga0501034_0193731 3300049571 Bacteria 1994
177 Ga0501036_0005620 3300049572 Bacteria 10170
178 Ga0501036_0078788 3300049572 Bacteria 2787
179 Ga0501036_0092279 3300049572 Bacteria 2558
180 Ga0501038_0052913 3300049574 Bacteria 3498
181 Ga0501039_0001492 3300049575 Bacteria 17220
182 Ga0501043_0074889 3300049579 Bacteria 2659
183 Ga0501043_0128260 3300049579 Bacteria 1989
184 Ga0501046_0002589 3300049580 Bacteria 16916
185 Ga0501046_0010768 3300049580 Bacteria 7842
186 Ga0501047_0001750 3300049581 Bacteria 21033
187 Ga0501047_0008936 3300049581 Bacteria 9460
188 Ga0501047_0010712 3300049581 Bacteria 8666
189 Ga0501047_0032162 3300049581 Bacteria 5063
190 Ga0501047_0051463 3300049581 Bacteria 3980
191 Ga0501047_0056832 3300049581 Bacteria 3785
192 Ga0501047_0099793 3300049581 Bacteria 2782
193 Ga0501047_0177418 3300049581 Bacteria 1998
194 Ga0501048_0013486 3300049582 Bacteria 6065
195 Ga0501067_0000538 3300049583 Bacteria 20600
196 Ga0501067_0027629 3300049583 Bacteria 3144
197 Ga0501070_0000020 3300049586 Bacteria 169025
198 Ga0501070_0068300 3300049586 Bacteria 2942
199 Ga0501072_0019366 3300049588 Bacteria 5260
200 Ga0501072_0045828 3300049588 Bacteria 3439
201 Ga0501074_0134883 3300049590 Bacteria 1766
202 Ga0501076_0110112 3300049592 Bacteria 2226
203 Ga0501079_0020707 3300049741 Bacteria 5028
204 Ga0501079_0054511 3300049741 Bacteria 3084
205 Ga0501079_0058317 3300049741 Bacteria 2979
206 Ga0501080_0001131 3300049742 Bacteria 21945
207 Ga0501035_0000322 3300049822 Bacteria 55416
208 Ga0501035_0002259 3300049822 Bacteria 19051
209 Ga0501035_0029816 3300049822 Bacteria 4976
210 Ga0501035_0032615 3300049822 Bacteria 4738
211 Ga0501035_0050193 3300049822 Bacteria 3739
212 Ga0501044_0002446 3300049823 Bacteria 21167
213 Ga0501044_0010924 3300049823 Bacteria 9855
214 Ga0501044_0074361 3300049823 Bacteria 3452
215 Ga0501044_0095976 3300049823 Bacteria 2987
216 nmdc:mga0n895_35860_c1 3300050512 Bacteria 4786
217 nmdc:mga0rr50_13810_c1 3300050513 Bacteria 5274
218 nmdc:mga0rr50_21760_c1 3300050513 Bacteria 4385
219 nmdc:mga08x19_18020_c1 3300050514 Bacteria 4326
220 nmdc:mga08x19_51_c1 3300050514 Bacteria 124093
221 Ga0500595_000371 3300053119 Bacteria 28943
222 Ga0500655_002886 3300053133 Bacteria 3121
223 Ga0500573_0000006 3300053140 Bacteria 285988
224 Ga0500619_001905 3300053154 Bacteria 3864
225 Ga0501084_0000096 3300054114 Bacteria 65139
226 Ga0501084_0000900 3300054114 Bacteria 22998
227 Ga0501084_0117590 3300054114 Bacteria 2235
228 Ga0496121_0004693
229 JGI25165J46597_1000017
230 JGI25153J46596_10000392
231 rootH2_10018950
232 Ga0070683_100163516
233 Ga0070680_100000073
234 Ga0070660_100001465
235 Ga0070691_10000613
236 Ga0070661_100010990
237 Ga0070659_100012880
238 Ga0070667_100009310
239 Ga0070709_10000336
240 Ga0070713_100000086
241 Ga0070710_10036207
242 Ga0070711_100002165
243 Ga0070678_100010804
244 Ga0070678_100013795
245 Ga0070681_10000132
246 Ga0068867_100010005
247 Ga0068867_100012866
248 Ga0070679_100001077
249 Ga0070679_100010011
250 Ga0070684_100113704
251 Ga0068853_100002067
252 Ga0070693_100024281
253 Ga0070665_100001230
254 Ga0068855_100000114
255 Ga0068855_100013225
256 Ga0068855_100014070
257 Ga0068855_100020282
258 Ga0070664_100062475
259 Ga0068857_100006942
260 Ga0068856_100000156
261 Ga0068856_100015935
262 Ga0068852_100006200
263 Ga0068852_100012201
264 Ga0068852_100078751
265 Ga0068858_100071102
266 Ga0068860_100049818
267 Ga0070712_100000282
268 Ga0070712_100000296
269 Ga0097621_100000399
270 Ga0068871_100000342
271 Ga0068871_100003282
272 Ga0068865_100001888
273 Ga0075436_100000365
274 Ga0075436_100016931
275 Ga0075435_100078185
276 Ga0105240_10000174
277 Ga0105240_10014828
278 Ga0105240_10029543
279 Ga0105245_10050529
280 Ga0105243_10019446
281 Ga0105242_10017895
282 Ga0105242_10037461
283 Ga0105248_10000009
284 Ga0105248_10011886
285 Ga0105237_10003958
286 Ga0105238_10006389
287 Ga0105238_10056336
288 Ga0105238_10148271
289 Ga0105249_10040804
290 Ga0105239_10001145
291 Ga0105239_10014767
292 Ga0105239_10023274
293 Ga0105239_10023816
294 Ga0157370_10010632
295 Ga0157369_10001206
296 Ga0157369_10034827
297 Ga0157369_10060991
298 Ga0157378_10032417
299 Ga0157378_10154570
300 Ga0163162_10014482
301 Ga0163162_10194573
302 Ga0157372_10039374
303 Ga0157372_10156510
304 Ga0157379_10000713
305 Ga0157379_10003798
306 Ga0157376_10030584
307 Ga0213876_10000381
308 Ga0209233_1000006
309 Ga0209233_1000892
310 Ga0209758_1000008
311 Ga0207680_10015062
312 Ga0207680_10050915
313 Ga0207699_10000256
314 Ga0207705_10000345
315 Ga0207654_10021793
316 Ga0207707_10000002
317 Ga0207707_10001115
318 Ga0207695_10000004
319 Ga0207695_10016298
320 Ga0207695_10097084
321 Ga0207671_10009462
322 Ga0207693_10000150
323 Ga0207693_10000169
324 Ga0207693_10076805
325 Ga0207660_10000069
326 Ga0207660_10002476
327 Ga0207657_10000333
328 Ga0207649_10010626
329 Ga0207652_10000163
330 Ga0207652_10001135
331 Ga0207694_10000015
332 Ga0207687_10039565
333 Ga0207700_10000005
334 Ga0207664_10010775
335 Ga0207690_10031413
336 Ga0207686_10013465
337 Ga0207686_10050921
338 Ga0207709_10002179
339 Ga0207711_10000003
340 Ga0207711_10000005
341 Ga0207711_10000009
342 Ga0207711_10000015
343 Ga0207667_10000012
344 Ga0207667_10015577
345 Ga0207658_10105529
346 Ga0207677_10052293
347 Ga0207639_10022803
348 Ga0207702_10000055
349 Ga0207702_10016334
350 Ga0207674_10012229
351 Ga0207675_100111106
352 Ga0207683_10036263
353 Ga0207698_10005904
354 Ga0207698_10084209
355 Ga0268266_10000930
356 Ga0268266_10104360
357 Ga0268264_10101932
358 Ga0265318_10000326
359 Ga0265338_10000007
360 Ga0265338_10026967
361 Ga0265332_10005958
362 Ga0265320_10002374
363 Ga0265325_10000001
364 Ga0265325_10001056
365 Ga0265325_10004104
366 Ga0265340_10018353
367 Ga0265339_10000206
368 Ga0265339_10000607
369 Ga0265339_10018417
370 Ga0265316_10016778
371 Ga0265316_10100036
372 Ga0265313_10001083
373 Ga0265313_10002647
374 Ga0265313_10004891
375 Ga0265313_10027073
376 Ga0265314_10000522
377 Ga0265314_10006427
378 Ga0265314_10017638
379 Ga0265342_10002579
380 Ga0265342_10007364
381 Ga0307516_10084313
382 Ga0373934_0014212
383 Ga0373956_0020981
384 Ga0373927_0099199
385 Ga0436365_1242687
386 Ga0436365_1464499
387 Ga0436363_1243392
388 Ga0495580_0031198
389 Ga0495609_0020918
390 Ga0495645_0031295
391 Ga0495622_0000443
392 Ga0496126_0001436
393 Ga0495682_0004635
394 Ga0501031_0015900
395 Ga0501032_0016652
396 Ga0501032_0031648
397 Ga0501032_0056348
398 Ga0501033_0002034
399 Ga0501033_0016165
400 Ga0501033_0096907
401 Ga0501034_0022411
402 Ga0501034_0143087
403 Ga0501034_0193731
404 Ga0501036_0005620
405 Ga0501036_0078788
406 Ga0501036_0092279
407 Ga0501038_0052913
408 Ga0501039_0001492
409 Ga0501043_0074889
410 Ga0501043_0128260
411 Ga0501046_0002589
412 Ga0501046_0010768
413 Ga0501047_0001750
414 Ga0501047_0008936
415 Ga0501047_0010712
416 Ga0501047_0032162
417 Ga0501047_0051463
418 Ga0501047_0056832
419 Ga0501047_0099793
420 Ga0501047_0177418
421 Ga0501048_0013486
422 Ga0501067_0000538
423 Ga0501067_0027629
424 Ga0501070_0000020
425 Ga0501070_0068300
426 Ga0501072_0019366
427 Ga0501072_0045828
428 Ga0501074_0134883
429 Ga0501076_0110112
430 Ga0501079_0020707
431 Ga0501079_0054511
432 Ga0501079_0058317
433 Ga0501080_0001131
434 Ga0501035_0000322
435 Ga0501035_0002259
436 Ga0501035_0029816
437 Ga0501035_0032615
438 Ga0501035_0050193
439 Ga0501044_0002446
440 Ga0501044_0010924
441 Ga0501044_0074361
442 Ga0501044_0095976
443 nmdc:mga0n895_35860_c1
444 nmdc:mga0rr50_13810_c1
445 nmdc:mga0rr50_21760_c1
446 nmdc:mga08x19_18020_c1
447 nmdc:mga08x19_51_c1
448 Ga0500595_000371
449 Ga0500655_002886
450 Ga0500573_0000006
451 Ga0500619_001905
452 Ga0501084_0000096
453 Ga0501084_0000900
454 Ga0501084_0117590

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

350

418

0.97

PF08447

PAS_3

PAS fold

242

324

0.95

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

464

579

0.94

PF14598

PAS_11

PAS domain

230

319

0.93

PF13426

PAS_9

PAS domain

232

329

0.89

PF08448

PAS_4

PAS fold

226

332

0.88

PF00989

PAS

PAS fold

220

327

0.78

Map