F340623

General Info

Members Datasets Scaffolds Average Seq Length
228 109 456 427

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100110917|Ga0070683_1001109172
Length 440
Sequence VSAPSRAAGGLRPAELIQKKRDGGELTDVEISGLVLAYARDEIPDYQMAAFCMAAYFKGLSHAETHALTDAMVQSGETVDLSPLGRKVVDKHSTGGVGDKTSIALGPVVAACGVPFAKMSGRGLGHTGGTLDKLEAIPGFNVELDIESFLAQVREIGMAIIGQTAELVPADKRLYALRDVTATVDIIPLIASSIMSKKIAGGANAIVLDVKVGDGAFMKDIDSARDLAEAMRELGVRAGREVVCELTDMDQPLGQAVGNALEIREAVATLTGEGPPDLRELVLGAAMHLLTLSDLGIDAAEGRARAEGAIADGSALAVYERWIRAQGGDPDLEALPRAPVTRHVPASAGGFVQRIATTAIGEAALSLGAGRLRKEDDIDHAVGIVCVAKRGDEVGVGDVLAEIHARTEESAEAAAAEVSAAYRVGQKRPDDIPIVLDVIA

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
5 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
6 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
7 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
13 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
19 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
20 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
32 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
33 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
34 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
35 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
36 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
37 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
38 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
41 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
42 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
43 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
44 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
45 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
46 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
47 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
48 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
49 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
50 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
51 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
52 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
53 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
54 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
55 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
56 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
57 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
58 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
59 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
60 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
61 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
62 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
63 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
66 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
67 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
90 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
91 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
92 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
93 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
94 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
97 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
103 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
104 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
109 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.56
Metatranscriptomes 0
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.02
Rhizosphere 91.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100110917 3300005329 Bacteria 2588
2 Ga0070674_100028449 3300005356 Bacteria 3671
3 Ga0070713_100132571 3300005436 Bacteria 2199
4 Ga0070662_100071310 3300005457 Bacteria 2561
5 Ga0068867_100090659 3300005459 Bacteria 2319
6 Ga0070696_100030547 3300005546 Bacteria 3689
7 Ga0068857_100000499 3300005577 Bacteria 28113
8 Ga0081455_10003895 3300005937 Bacteria 16994
9 Ga0081455_10018077 3300005937 Bacteria 6731
10 Ga0081455_10018967 3300005937 Bacteria 6523
11 Ga0081455_10043884 3300005937 Bacteria 3907
12 Ga0081538_10000136 3300005981 Bacteria 76141
13 Ga0081538_10000303 3300005981 Bacteria 56689
14 Ga0081538_10001817 3300005981 Bacteria 21493
15 Ga0081538_10002976 3300005981 Bacteria 16161
16 Ga0081538_10029081 3300005981 Bacteria 3784
17 Ga0081538_10044208 3300005981 Bacteria 2782
18 Ga0081539_10001492 3300005985 Bacteria 39584
19 Ga0075428_100007123 3300006844 Bacteria 12385
20 Ga0075428_100032344 3300006844 Bacteria 5777
21 Ga0075430_100040459 3300006846 Bacteria 3945
22 Ga0075430_100045962 3300006846 Bacteria 3688
23 Ga0075429_100019048 3300006880 Bacteria 5946
24 Ga0068865_100145332 3300006881 Bacteria 1793
25 Ga0111539_10009131 3300009094 Bacteria 12545
26 Ga0105245_10048074 3300009098 Bacteria 3816
27 Ga0105245_10123215 3300009098 Bacteria 2424
28 Ga0114129_10006697 3300009147 Bacteria 16362
29 Ga0114129_10009794 3300009147 Bacteria 13667
30 Ga0105246_10037168 3300011119 Bacteria 3267
31 Ga0157375_10362513 3300013308 Bacteria 1615
32 Ga0207657_10138322 3300025919 Bacteria 1991
33 Ga0207687_10009952 3300025927 Bacteria 6224
34 Ga0207704_10135785 3300025938 Bacteria 1712
35 Ga0207689_10124348 3300025942 Bacteria 2122
36 Ga0207661_10208579 3300025944 Bacteria 1721
37 Ga0207668_10046565 3300025972 Bacteria 2964
38 Ga0207639_10091747 3300026041 Bacteria 2433
39 Ga0207708_10016951 3300026075 Bacteria 5485
40 Ga0207674_10003054 3300026116 Bacteria 20712
41 Ga0207675_100026097 3300026118 Bacteria 5438
42 Ga0207675_100132233 3300026118 Bacteria 2366
43 Ga0268265_10068586 3300028380 Bacteria 2751
44 Ga0307405_10021715 3300031731 Bacteria 3614
45 Ga0307413_10015048 3300031824 Bacteria 3953
46 Ga0307410_10000655 3300031852 Bacteria 14288
47 Ga0307406_10003401 3300031901 Bacteria 8667
48 Ga0307406_10110097 3300031901 Bacteria 1894
49 Ga0307407_10000386 3300031903 Bacteria 13330
50 Ga0307416_100009181 3300032002 Bacteria 6450
51 Ga0307416_100034207 3300032002 Bacteria 3864
52 Ga0307416_100106614 3300032002 Bacteria 2457
53 Ga0307414_10020105 3300032004 Bacteria 4154
54 Ga0307411_10004355 3300032005 Bacteria 6767
55 Ga0307415_100000048 3300032126 Bacteria 51694
56 Ga0373943_0028897 3300035170 Bacteria 2616
57 Ga0373947_0028936 3300035725 Bacteria 3250
58 Ga0373925_0068263 3300037068 Bacteria 2683
59 Ga0395899_0010632 3300037312 Bacteria 7052
60 Ga0395899_0012707 3300037312 Bacteria 6451
61 Ga0395899_0012723 3300037312 Bacteria 6446
62 Ga0395899_0079819 3300037312 Bacteria 2383
63 Ga0395900_0003636 3300037418 Bacteria 16572
64 Ga0395900_0041144 3300037418 Bacteria 4765
65 Ga0395900_0047490 3300037418 Bacteria 4420
66 Ga0395900_0050593 3300037418 Bacteria 4279
67 Ga0395898_0008697 3300037466 Bacteria 10712
68 Ga0395898_0012079 3300037466 Bacteria 8941
69 Ga0395898_0129776 3300037466 Bacteria 2414
70 Ga0436364_0797811 3300037853 Bacteria 9536
71 Ga0395901_0003420 3300038443 Bacteria 15996
72 Ga0395901_0011693 3300038443 Bacteria 8894
73 Ga0395901_0015845 3300038443 Bacteria 7683
74 Ga0395901_0154577 3300038443 Bacteria 2410
75 Ga0395901_0316399 3300038443 Bacteria 1616
76 Ga0436365_1709236 3300039437 Bacteria 4216
77 Ga0451795_0107714 3300041456 Bacteria 3130
78 Ga0451851_0428125 3300041507 Bacteria 1501
79 Ga0439434_0021573 3300042435 Bacteria 1935
80 Ga0466967_0161813 3300045976 Bacteria 2101
81 Ga0495596_0035169 3300046500 Bacteria 1987
82 Ga0495611_0068597 3300046648 Bacteria 1619
83 Ga0495659_0041554 3300046664 Bacteria 1643
84 Ga0495647_0079041 3300046681 Bacteria 1331
85 Ga0495624_0050787 3300046690 Bacteria 2626
86 Ga0495589_0054890 3300046794 Bacteria 1964
87 Ga0495589_0064371 3300046794 Bacteria 1798
88 Ga0495676_0021914 3300047321 Bacteria 5569
89 Ga0496102_0026366 3300048905 Bacteria 5183
90 Ga0496102_0249178 3300048905 Bacteria 1674
91 Ga0496105_0022624 3300048908 Bacteria 5092
92 Ga0496106_0036572 3300048909 Bacteria 3673
93 Ga0496108_0031091 3300048911 Bacteria 4427
94 Ga0496109_0030368 3300048912 Bacteria 4844
95 Ga0496109_0121081 3300048912 Bacteria 2438
96 Ga0496109_0196622 3300048912 Bacteria 1895
97 Ga0496110_0012971 3300048913 Bacteria 6873
98 Ga0496110_0060764 3300048913 Bacteria 3334
99 Ga0496111_0088277 3300048914 Bacteria 2270
100 Ga0496111_0216352 3300048914 Bacteria 1423
101 Ga0496112_0013658 3300048915 Bacteria 7504
102 Ga0496112_0022733 3300048915 Bacteria 5981
103 Ga0496112_0125929 3300048915 Bacteria 2533
104 Ga0501031_0000073 3300049568 Bacteria 53081
105 Ga0501031_0007888 3300049568 Bacteria 6930
106 Ga0501032_0000467 3300049569 Bacteria 32592
107 Ga0501033_0000257 3300049570 Bacteria 50975
108 Ga0501033_0144139 3300049570 Bacteria 1721
109 Ga0501034_0042505 3300049571 Bacteria 4601
110 Ga0501036_0000089 3300049572 Bacteria 57499
111 Ga0501036_0010621 3300049572 Bacteria 7607
112 Ga0501036_0026923 3300049572 Bacteria 4859
113 Ga0501036_0031600 3300049572 Bacteria 4474
114 Ga0501036_0039095 3300049572 Bacteria 4017
115 Ga0501037_0021193 3300049573 Bacteria 4801
116 Ga0501037_0072502 3300049573 Bacteria 2504
117 Ga0501037_0079624 3300049573 Bacteria 2378
118 Ga0501038_0000324 3300049574 Bacteria 41091
119 Ga0501038_0076389 3300049574 Bacteria 2829
120 Ga0501038_0121281 3300049574 Bacteria 2155
121 Ga0501038_0151762 3300049574 Bacteria 1888
122 Ga0501038_0279424 3300049574 Bacteria 1315
123 Ga0501039_0000077 3300049575 Bacteria 74065
124 Ga0501039_0004208 3300049575 Bacteria 10839
125 Ga0501039_0010404 3300049575 Bacteria 7090
126 Ga0501040_0000568 3300049576 Bacteria 22444
127 Ga0501040_0001456 3300049576 Bacteria 14997
128 Ga0501040_0047490 3300049576 Bacteria 2931
129 Ga0501040_0097076 3300049576 Bacteria 2052
130 Ga0501040_0138077 3300049576 Bacteria 1716
131 Ga0501041_0000022 3300049577 Bacteria 52719
132 Ga0501041_0002500 3300049577 Bacteria 10461
133 Ga0501041_0006882 3300049577 Bacteria 6664
134 Ga0501042_0000487 3300049578 Bacteria 20578
135 Ga0501042_0001052 3300049578 Bacteria 15753
136 Ga0501042_0004571 3300049578 Bacteria 8830
137 Ga0501042_0092405 3300049578 Bacteria 2172
138 Ga0501043_0000208 3300049579 Bacteria 53881
139 Ga0501043_0142067 3300049579 Bacteria 1879
140 Ga0501046_0000089 3300049580 Bacteria 99031
141 Ga0501047_0000555 3300049581 Bacteria 40171
142 Ga0501047_0098671 3300049581 Bacteria 2799
143 Ga0501048_0000618 3300049582 Bacteria 25322
144 Ga0501048_0006898 3300049582 Bacteria 8631
145 Ga0501048_0007614 3300049582 Bacteria 8209
146 Ga0501048_0096715 3300049582 Bacteria 2082
147 Ga0501067_0081113 3300049583 Bacteria 1798
148 Ga0501068_0000459 3300049584 Bacteria 20624
149 Ga0501068_0046856 3300049584 Bacteria 2606
150 Ga0501068_0063017 3300049584 Bacteria 2255
151 Ga0501069_0000894 3300049585 Bacteria 14228
152 Ga0501069_0022067 3300049585 Bacteria 3460
153 Ga0501069_0030978 3300049585 Bacteria 2939
154 Ga0501070_0016066 3300049586 Bacteria 6291
155 Ga0501070_0110967 3300049586 Bacteria 2266
156 Ga0501071_0000004 3300049587 Bacteria 79181
157 Ga0501071_0003067 3300049587 Bacteria 10346
158 Ga0501071_0004068 3300049587 Bacteria 9241
159 Ga0501071_0076187 3300049587 Bacteria 2449
160 Ga0501071_0115023 3300049587 Bacteria 1990
161 Ga0501072_0002068 3300049588 Bacteria 14926
162 Ga0501072_0002241 3300049588 Bacteria 14435
163 Ga0501072_0002458 3300049588 Bacteria 13864
164 Ga0501072_0037029 3300049588 Bacteria 3826
165 Ga0501072_0134614 3300049588 Bacteria 1970
166 Ga0501073_0001315 3300049589 Bacteria 18283
167 Ga0501074_0000002 3300049590 Bacteria 121767
168 Ga0501075_0000595 3300049591 Bacteria 22087
169 Ga0501075_0001737 3300049591 Bacteria 14319
170 Ga0501075_0011232 3300049591 Bacteria 6334
171 Ga0501076_0000224 3300049592 Bacteria 34195
172 Ga0501076_0000599 3300049592 Bacteria 23076
173 Ga0501076_0001901 3300049592 Bacteria 14249
174 Ga0501076_0056472 3300049592 Bacteria 3116
175 Ga0501076_0125046 3300049592 Bacteria 2084
176 Ga0501077_0000412 3300049593 Bacteria 25898
177 Ga0501077_0001339 3300049593 Bacteria 14869
178 Ga0501077_0011934 3300049593 Bacteria 5435
179 Ga0501077_0029292 3300049593 Bacteria 3500
180 Ga0501077_0077787 3300049593 Bacteria 2102
181 Ga0501077_0100343 3300049593 Bacteria 1834
182 Ga0501079_0000978 3300049741 Bacteria 19671
183 Ga0501079_0001055 3300049741 Bacteria 19125
184 Ga0501079_0004366 3300049741 Bacteria 10483
185 Ga0501079_0004390 3300049741 Bacteria 10441
186 Ga0501079_0013333 3300049741 Bacteria 6267
187 Ga0501079_0042979 3300049741 Bacteria 3488
188 Ga0501079_0142463 3300049741 Bacteria 1867
189 Ga0501080_0000783 3300049742 Bacteria 25880
190 Ga0501080_0011685 3300049742 Bacteria 8043
191 Ga0501081_0000534 3300049743 Bacteria 21478
192 Ga0501081_0004542 3300049743 Bacteria 8911
193 Ga0501081_0055870 3300049743 Bacteria 2727
194 Ga0501081_0258271 3300049743 Bacteria 1273
195 Ga0501083_0000183 3300049744 Bacteria 40280
196 Ga0501083_0037013 3300049744 Bacteria 3325
197 Ga0501035_0001782 3300049822 Bacteria 21752
198 Ga0501044_0001896 3300049823 Bacteria 24187
199 Ga0501044_0113861 3300049823 Bacteria 2711
200 Ga0501045_0000014 3300049824 Bacteria 73464
201 Ga0501045_0000647 3300049824 Bacteria 22062
202 Ga0501045_0002319 3300049824 Bacteria 12903
203 Ga0501045_0007964 3300049824 Bacteria 7380
204 nmdc:mga05p37_420657_c1 3300050507 Bacteria 1555
205 nmdc:mga05p37_43980_c1 3300050507 Bacteria 5495
206 nmdc:mga05p37_65996_c1 3300050507 Bacteria 4452
207 nmdc:mga0qj67_51432_c1 3300050509 Bacteria 2255
208 nmdc:mga06r32_58766_c1 3300050510 Bacteria 3696
209 nmdc:mga08y16_189994_c1 3300050511 Bacteria 2131
210 nmdc:mga08y16_25657_c1 3300050511 Bacteria 6219
211 nmdc:mga0a205_73410_c1 3300050515 Bacteria 3305
212 Ga0501084_0001575 3300054114 Bacteria 18067
213 Ga0501084_0005594 3300054114 Bacteria 10317
214 Ga0501084_0006774 3300054114 Bacteria 9414
215 Ga0501084_0036857 3300054114 Bacteria 4086
216 Ga0501084_0098920 3300054114 Bacteria 2449
217 Ga0501084_0184384 3300054114 Bacteria 1761
218 Ga0501084_0210034 3300054114 Bacteria 1642
219 Ga0501082_0000241 3300060353 Bacteria 47793
220 Ga0501082_0001344 3300060353 Bacteria 21598
221 Ga0501082_0003000 3300060353 Bacteria 14745
222 Ga0501082_0032334 3300060353 Bacteria 4512
223 Ga0501082_0107957 3300060353 Bacteria 2408
224 Ga0530510_0000176 3300061734 Bacteria 38981
225 Ga0530510_0000682 3300061734 Bacteria 21916
226 Ga0530510_0048230 3300061734 Bacteria 3078
227 Ga0530510_0199547 3300061734 Bacteria 1485
228 2698325485 2695420987 Bacteria 6152737
229 Ga0070683_100110917
230 Ga0070674_100028449
231 Ga0070713_100132571
232 Ga0070662_100071310
233 Ga0068867_100090659
234 Ga0070696_100030547
235 Ga0068857_100000499
236 Ga0081455_10003895
237 Ga0081455_10018077
238 Ga0081455_10018967
239 Ga0081455_10043884
240 Ga0081538_10000136
241 Ga0081538_10000303
242 Ga0081538_10001817
243 Ga0081538_10002976
244 Ga0081538_10029081
245 Ga0081538_10044208
246 Ga0081539_10001492
247 Ga0075428_100007123
248 Ga0075428_100032344
249 Ga0075430_100040459
250 Ga0075430_100045962
251 Ga0075429_100019048
252 Ga0068865_100145332
253 Ga0111539_10009131
254 Ga0105245_10048074
255 Ga0105245_10123215
256 Ga0114129_10006697
257 Ga0114129_10009794
258 Ga0105246_10037168
259 Ga0157375_10362513
260 Ga0207657_10138322
261 Ga0207687_10009952
262 Ga0207704_10135785
263 Ga0207689_10124348
264 Ga0207661_10208579
265 Ga0207668_10046565
266 Ga0207639_10091747
267 Ga0207708_10016951
268 Ga0207674_10003054
269 Ga0207675_100026097
270 Ga0207675_100132233
271 Ga0268265_10068586
272 Ga0307405_10021715
273 Ga0307413_10015048
274 Ga0307410_10000655
275 Ga0307406_10003401
276 Ga0307406_10110097
277 Ga0307407_10000386
278 Ga0307416_100009181
279 Ga0307416_100034207
280 Ga0307416_100106614
281 Ga0307414_10020105
282 Ga0307411_10004355
283 Ga0307415_100000048
284 Ga0373943_0028897
285 Ga0373947_0028936
286 Ga0373925_0068263
287 Ga0395899_0010632
288 Ga0395899_0012707
289 Ga0395899_0012723
290 Ga0395899_0079819
291 Ga0395900_0003636
292 Ga0395900_0041144
293 Ga0395900_0047490
294 Ga0395900_0050593
295 Ga0395898_0008697
296 Ga0395898_0012079
297 Ga0395898_0129776
298 Ga0436364_0797811
299 Ga0395901_0003420
300 Ga0395901_0011693
301 Ga0395901_0015845
302 Ga0395901_0154577
303 Ga0395901_0316399
304 Ga0436365_1709236
305 Ga0451795_0107714
306 Ga0451851_0428125
307 Ga0439434_0021573
308 Ga0466967_0161813
309 Ga0495596_0035169
310 Ga0495611_0068597
311 Ga0495659_0041554
312 Ga0495647_0079041
313 Ga0495624_0050787
314 Ga0495589_0054890
315 Ga0495589_0064371
316 Ga0495676_0021914
317 Ga0496102_0026366
318 Ga0496102_0249178
319 Ga0496105_0022624
320 Ga0496106_0036572
321 Ga0496108_0031091
322 Ga0496109_0030368
323 Ga0496109_0121081
324 Ga0496109_0196622
325 Ga0496110_0012971
326 Ga0496110_0060764
327 Ga0496111_0088277
328 Ga0496111_0216352
329 Ga0496112_0013658
330 Ga0496112_0022733
331 Ga0496112_0125929
332 Ga0501031_0000073
333 Ga0501031_0007888
334 Ga0501032_0000467
335 Ga0501033_0000257
336 Ga0501033_0144139
337 Ga0501034_0042505
338 Ga0501036_0000089
339 Ga0501036_0010621
340 Ga0501036_0026923
341 Ga0501036_0031600
342 Ga0501036_0039095
343 Ga0501037_0021193
344 Ga0501037_0072502
345 Ga0501037_0079624
346 Ga0501038_0000324
347 Ga0501038_0076389
348 Ga0501038_0121281
349 Ga0501038_0151762
350 Ga0501038_0279424
351 Ga0501039_0000077
352 Ga0501039_0004208
353 Ga0501039_0010404
354 Ga0501040_0000568
355 Ga0501040_0001456
356 Ga0501040_0047490
357 Ga0501040_0097076
358 Ga0501040_0138077
359 Ga0501041_0000022
360 Ga0501041_0002500
361 Ga0501041_0006882
362 Ga0501042_0000487
363 Ga0501042_0001052
364 Ga0501042_0004571
365 Ga0501042_0092405
366 Ga0501043_0000208
367 Ga0501043_0142067
368 Ga0501046_0000089
369 Ga0501047_0000555
370 Ga0501047_0098671
371 Ga0501048_0000618
372 Ga0501048_0006898
373 Ga0501048_0007614
374 Ga0501048_0096715
375 Ga0501067_0081113
376 Ga0501068_0000459
377 Ga0501068_0046856
378 Ga0501068_0063017
379 Ga0501069_0000894
380 Ga0501069_0022067
381 Ga0501069_0030978
382 Ga0501070_0016066
383 Ga0501070_0110967
384 Ga0501071_0000004
385 Ga0501071_0003067
386 Ga0501071_0004068
387 Ga0501071_0076187
388 Ga0501071_0115023
389 Ga0501072_0002068
390 Ga0501072_0002241
391 Ga0501072_0002458
392 Ga0501072_0037029
393 Ga0501072_0134614
394 Ga0501073_0001315
395 Ga0501074_0000002
396 Ga0501075_0000595
397 Ga0501075_0001737
398 Ga0501075_0011232
399 Ga0501076_0000224
400 Ga0501076_0000599
401 Ga0501076_0001901
402 Ga0501076_0056472
403 Ga0501076_0125046
404 Ga0501077_0000412
405 Ga0501077_0001339
406 Ga0501077_0011934
407 Ga0501077_0029292
408 Ga0501077_0077787
409 Ga0501077_0100343
410 Ga0501079_0000978
411 Ga0501079_0001055
412 Ga0501079_0004366
413 Ga0501079_0004390
414 Ga0501079_0013333
415 Ga0501079_0042979
416 Ga0501079_0142463
417 Ga0501080_0000783
418 Ga0501080_0011685
419 Ga0501081_0000534
420 Ga0501081_0004542
421 Ga0501081_0055870
422 Ga0501081_0258271
423 Ga0501083_0000183
424 Ga0501083_0037013
425 Ga0501035_0001782
426 Ga0501044_0001896
427 Ga0501044_0113861
428 Ga0501045_0000014
429 Ga0501045_0000647
430 Ga0501045_0002319
431 Ga0501045_0007964
432 nmdc:mga05p37_420657_c1
433 nmdc:mga05p37_43980_c1
434 nmdc:mga05p37_65996_c1
435 nmdc:mga0qj67_51432_c1
436 nmdc:mga06r32_58766_c1
437 nmdc:mga08y16_189994_c1
438 nmdc:mga08y16_25657_c1
439 nmdc:mga0a205_73410_c1
440 Ga0501084_0001575
441 Ga0501084_0005594
442 Ga0501084_0006774
443 Ga0501084_0036857
444 Ga0501084_0098920
445 Ga0501084_0184384
446 Ga0501084_0210034
447 Ga0501082_0000241
448 Ga0501082_0001344
449 Ga0501082_0003000
450 Ga0501082_0032334
451 Ga0501082_0107957
452 Ga0530510_0000176
453 Ga0530510_0000682
454 Ga0530510_0048230
455 Ga0530510_0199547
456 2698325485

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00591

Glycos_transf_3

Glycosyl transferase family, a/b domain

85

316

0.98

PF02885

Glycos_trans_3N

Glycosyl transferase family, helical bundle domain

14

76

0.98

PF07831

PYNP_C

Pyrimidine nucleoside phosphorylase C-terminal domain

351

425

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ey3-assembly1.cif.gz_B x-ray structure of the thymidine phosphorylase from salmonella typhimurium in complex with cytidine and sulphate 0.9638 13 439
7m7k-assembly1.cif.gz_B-2 crystal structure of uridine bound to geobacillus thermoglucosidasius pyrimidine nucleoside phosphorylase pynp 0.9528 12 440
1azy-assembly1.cif.gz_A structural and theoretical studies suggest domain movement produces an active conformation of thymidine phosphorylase 0.9512 11 440
3h5q-assembly1.cif.gz_A-2 crystal structure of a putative pyrimidine-nucleoside phosphorylase from staphylococcus aureus 0.9443 11 439
7m7k-assembly1.cif.gz_B-2 crystal structure of uridine bound to geobacillus thermoglucosidasius pyrimidine nucleoside phosphorylase pynp 0.9443 12 440
ID Description Score Start End Superfamily
af_P9WFS1_8_72_1.20.970.10 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9915 15 76 1.20.970.10
af_Q2FWC1_1_67_1.20.970.10 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9907 11 77 1.20.970.10
1brwB03 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9833 11 77 1.20.970.10
1brwA03 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9832 11 77 1.20.970.10
5olnA01 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9802 11 78 1.20.970.10
ID Description Score Start End GO Terms
AF-W4UHB0-F1-model_v4 deleted 0.9953 150 281
AF-A0A660A7B7-F1-model_v4 Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) 0.993 49 263 GO:0004645
GO:0004850
GO:0005829
GO:0006206
GO:0009032
GO:0047847
AF-A0A380Q1U5-F1-model_v4 deleted 0.9917 119 259
AF-A0A373NNA8-F1-model_v4 Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) 0.9894 11 320 GO:0004645
GO:0004850
GO:0005829
GO:0006206
GO:0006213
GO:0009032
GO:0047847
AF-A0A2M8NEB5-F1-model_v4 Thymidine phosphorylase 0.9889 157 252 GO:0004645
GO:0005829
GO:0006206
GO:0009032

Map