F340677

General Info

Members Datasets Scaffolds Average Seq Length
228 169 456 189

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100024749|Ga0070671_1000247494
Length 191
Sequence MADLAAARLNMVESQVRTADVTDIRIHDAMRALPREDFLPPAKAYLAYADIEVEYAAGRWLLKPRDVGKLIQALRPMPGEQVLAIAAPYAGAVIEQMGGVAVTRFDGDDLAALPADGLYDLIVCEGAVARAPQSWLSALKPGGRLGVVERDGPVGKAVLYVRAEDGVGRRDLFDATPPVLQGFAAQHGFAF

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300012502 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
33 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
64 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
65 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
70 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
71 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
72 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
73 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
76 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
77 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
82 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
83 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
86 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
93 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
94 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
95 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
96 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
99 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
102 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
109 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
112 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
113 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
123 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
124 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
125 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
126 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
127 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
128 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
129 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
130 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
131 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
132 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
133 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
134 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
135 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
136 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
137 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
138 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
139 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
140 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
141 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
142 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
143 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
144 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
145 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
148 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
149 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
150 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
151 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
152 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
153 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
154 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
155 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
156 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
157 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
158 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
159 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
160 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
161 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
162 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
163 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
164 2818991435 Caulobacter henricii 536 Isolate Unclassified
165 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
166 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
167 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
168 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
169 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.74
Metatranscriptomes 0
Isolates 5.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 30.26
Nodule 0
Rhizoplane 2.19
Rhizosphere 57.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100024749 3300005355 Bacteria 4918
2 rootL2_10095648 3300003322 Bacteria 4379
3 Ga0055524_1013271 3300003775 Bacteria 3114
4 Ga0055530_10016136 3300003791 Bacteria 2401
5 Ga0055530_10016306 3300003791 Bacteria 2379
6 Ga0055531_10000096 3300003794 Bacteria 95992
7 Ga0055531_10000659 3300003794 Bacteria 29682
8 Ga0070670_100000128 3300005331 Bacteria 71585
9 Ga0068869_100039184 3300005334 Bacteria 3382
10 Ga0070680_100087165 3300005336 Bacteria 2582
11 Ga0070680_100247139 3300005336 Bacteria 1508
12 Ga0070691_10077401 3300005341 Bacteria 1623
13 Ga0070661_100322512 3300005344 Bacteria 1207
14 Ga0070668_100062062 3300005347 Bacteria 2895
15 Ga0070671_100510078 3300005355 Bacteria 1035
16 Ga0070663_100280722 3300005455 Bacteria 1327
17 Ga0070662_100360352 3300005457 Bacteria 1193
18 Ga0070681_10014263 3300005458 Bacteria 7908
19 Ga0070679_100025741 3300005530 Bacteria 5774
20 Ga0070679_100858491 3300005530 Bacteria 851
21 Ga0068853_100474396 3300005539 Bacteria 1179
22 Ga0068853_100497401 3300005539 Bacteria 1151
23 Ga0068855_100825999 3300005563 Bacteria 983
24 Ga0070664_100189359 3300005564 Bacteria 1833
25 Ga0068864_100000154 3300005618 Bacteria 63744
26 Ga0068864_100365395 3300005618 Bacteria 1365
27 Ga0068863_100000172 3300005841 Bacteria 68888
28 Ga0068863_100114587 3300005841 Bacteria 2568
29 Ga0068863_100642710 3300005841 Bacteria 1052
30 Ga0068858_100001432 3300005842 Bacteria 24541
31 Ga0068862_100036867 3300005844 Bacteria 4144
32 Ga0075370_10029741 3300006353 Bacteria 3044
33 Ga0075370_10094362 3300006353 Bacteria 1728
34 Ga0105240_10001166 3300009093 Bacteria 46070
35 Ga0105240_10001551 3300009093 Bacteria 38976
36 Ga0105240_10256106 3300009093 Bacteria 2021
37 Ga0105240_10582963 3300009093 Bacteria 1233
38 Ga0105248_10047796 3300009177 Bacteria 4798
39 Ga0105248_10130084 3300009177 Bacteria 2840
40 Ga0105238_10214835 3300009551 Bacteria 1899
41 Ga0105238_10294472 3300009551 Bacteria 1606
42 Ga0105239_11161015 3300010375 Bacteria 889
43 Ga0157347_1011267 3300012502 Bacteria 948
44 Ga0157370_11132828 3300013104 Bacteria 707
45 Ga0163163_10130767 3300014325 Bacteria 2550
46 Ga0157379_10035295 3300014968 Bacteria 4459
47 Ga0182006_1058090 3300015261 Bacteria 1468
48 Ga0209676_1000072 3300025292 Bacteria 307347
49 Ga0209676_1000469 3300025292 Bacteria 67603
50 Ga0209050_1000077 3300025298 Bacteria 278985
51 Ga0209050_1000322 3300025298 Bacteria 96057
52 Ga0209256_1002187 3300025299 Bacteria 16761
53 Ga0209257_1000088 3300025304 Bacteria 279014
54 Ga0209257_1000408 3300025304 Bacteria 83362
55 Ga0207696_1030455 3300025711 Bacteria 1639
56 Ga0207707_10030137 3300025912 Bacteria 4744
57 Ga0207695_10002753 3300025913 Bacteria 25636
58 Ga0207695_10003149 3300025913 Bacteria 23550
59 Ga0207695_10003707 3300025913 Bacteria 21289
60 Ga0207660_10154411 3300025917 Bacteria 1766
61 Ga0207652_10021335 3300025921 Bacteria 5347
62 Ga0207681_10267814 3300025923 Bacteria 1340
63 Ga0207650_10205769 3300025925 Bacteria 1579
64 Ga0207644_10027735 3300025931 Bacteria 3914
65 Ga0207691_10936174 3300025940 Bacteria 724
66 Ga0207711_10112212 3300025941 Bacteria 2426
67 Ga0207689_10410304 3300025942 Bacteria 1130
68 Ga0207667_10393450 3300025949 Bacteria 1411
69 Ga0207667_10586374 3300025949 Bacteria 1125
70 Ga0207668_10272336 3300025972 Bacteria 1384
71 Ga0207703_10000586 3300026035 Bacteria 37084
72 Ga0207639_10317456 3300026041 Bacteria 1382
73 Ga0207639_10446860 3300026041 Bacteria 1173
74 Ga0207678_10040402 3300026067 Bacteria 4046
75 Ga0207702_10758934 3300026078 Bacteria 958
76 Ga0207641_10000160 3300026088 Bacteria 95407
77 Ga0207676_10000375 3300026095 Bacteria 38069
78 Ga0207676_10679993 3300026095 Bacteria 995
79 Ga0268266_10196100 3300028379 Bacteria 1846
80 Ga0268265_10097241 3300028380 Bacteria 2368
81 Ga0307517_10090609 3300028786 Bacteria 2507
82 Ga0307515_10046969 3300028794 Bacteria 6582
83 Ga0307515_10468983 3300028794 Bacteria 872
84 Ga0265338_10007753 3300028800 Bacteria 13211
85 Ga0265327_10001783 3300031251 Bacteria 25368
86 Ga0307513_10005418 3300031456 Bacteria 16866
87 Ga0307513_10010658 3300031456 Bacteria 11500
88 Ga0307513_10014181 3300031456 Bacteria 9750
89 Ga0307516_10000002 3300031730 Bacteria 467851
90 Ga0373936_0012615 3300035113 Bacteria 3217
91 Ga0373925_0521962 3300037068 Bacteria 976
92 Ga0395905_0155445 3300037471 Bacteria 2151
93 Ga0395901_0699700 3300038443 Bacteria 1011
94 Ga0436365_1486170 3300039437 Bacteria 7502
95 Ga0436361_1146848 3300039447 Bacteria 4290
96 Ga0439461_0036294 3300041410 Bacteria 1049
97 Ga0451853_2180335 3300041512 Bacteria 1142
98 Ga0439445_0032571 3300042004 Bacteria 1359
99 Ga0495590_0002727 3300046457 Bacteria 7295
100 Ga0495629_0107763 3300046459 Bacteria 1943
101 Ga0495638_0003013 3300046460 Bacteria 13443
102 Ga0495638_0013041 3300046460 Bacteria 5675
103 Ga0495650_0084026 3300046471 Bacteria 1222
104 Ga0495607_0019945 3300046501 Bacteria 4247
105 Ga0495606_0204871 3300046507 Bacteria 1122
106 Ga0495606_0284072 3300046507 Bacteria 903
107 Ga0495610_0008117 3300046512 Bacteria 6861
108 Ga0495616_0000295 3300046513 Bacteria 40308
109 Ga0495631_0007691 3300046518 Bacteria 5471
110 Ga0495632_0001252 3300046519 Bacteria 21547
111 Ga0495632_0347415 3300046519 Bacteria 652
112 Ga0495637_0058994 3300046520 Bacteria 1580
113 Ga0495643_0006921 3300046522 Bacteria 7378
114 Ga0495648_0000113 3300046524 Bacteria 98919
115 Ga0495654_0283738 3300046530 Bacteria 680
116 Ga0495609_0022983 3300046538 Bacteria 2870
117 Ga0495597_0030554 3300046542 Bacteria 2455
118 Ga0495597_0059228 3300046542 Bacteria 1672
119 Ga0495645_0113138 3300046543 Bacteria 1918
120 Ga0495622_0000742 3300046557 Bacteria 18318
121 Ga0495668_0038636 3300046616 Bacteria 2666
122 Ga0495668_0040762 3300046616 Bacteria 2589
123 Ga0495668_0077055 3300046616 Bacteria 1830
124 Ga0495668_0176914 3300046616 Bacteria 1169
125 Ga0495668_0245854 3300046616 Bacteria 980
126 Ga0495611_0103224 3300046648 Bacteria 1325
127 Ga0495625_0015292 3300046660 Bacteria 6082
128 Ga0495625_0043626 3300046660 Bacteria 3252
129 Ga0495625_0191593 3300046660 Bacteria 1354
130 Ga0495625_0191921 3300046660 Bacteria 1353
131 Ga0495669_0000001 3300046684 Bacteria 291866
132 Ga0495669_0036498 3300046684 Bacteria 2173
133 Ga0495669_0204280 3300046684 Bacteria 945
134 Ga0495671_0074837 3300046692 Bacteria 1661
135 Ga0495660_0063641 3300046810 Bacteria 1974
136 Ga0495672_0198395 3300047320 Bacteria 1005
137 Ga0495673_0002609 3300047469 Bacteria 12528
138 Ga0495681_0096646 3300047470 Bacteria 1297
139 Ga0495686_0018914 3300047472 Bacteria 4612
140 Ga0496102_0061926 3300048905 Bacteria 3426
141 Ga0496103_0030953 3300048906 Bacteria 3258
142 Ga0496107_0273916 3300048910 Bacteria 1256
143 Ga0496112_0282802 3300048915 Bacteria 1606
144 Ga0496115_0058695 3300048918 Bacteria 3097
145 Ga0496116_0155392 3300048919 Bacteria 1263
146 Ga0496117_0012214 3300048920 Bacteria 7596
147 Ga0496118_0012583 3300048921 Bacteria 8104
148 Ga0496119_0020163 3300048922 Bacteria 4873
149 Ga0496121_0000009 3300048924 Bacteria 836971
150 Ga0496124_0020436 3300048927 Bacteria 6117
151 Ga0495678_001348 3300049459 Bacteria 19647
152 Ga0495682_0119399 3300049460 Bacteria 944
153 Ga0501033_0000269 3300049570 Bacteria 50089
154 Ga0501034_0009798 3300049571 Bacteria 10018
155 Ga0501037_0039105 3300049573 Bacteria 3493
156 Ga0501038_0216983 3300049574 Bacteria 1528
157 Ga0501043_0415102 3300049579 Bacteria 1015
158 Ga0501043_0578315 3300049579 Bacteria 832
159 Ga0501047_0002332 3300049581 Bacteria 18141
160 Ga0501047_0124980 3300049581 Bacteria 2453
161 Ga0501044_0000816 3300049823 Bacteria 37462
162 nmdc:mga0k408_130994_c1 3300050493 Bacteria 1489
163 nmdc:mga0k408_68270_c1 3300050493 Bacteria 2073
164 nmdc:mga07m45_280143_c1 3300050496 Bacteria 970
165 Ga0500635_0000080 3300053080 Bacteria 63214
166 Ga0500578_0000005 3300053086 Bacteria 243789
167 Ga0500578_0354921 3300053086 Bacteria 856
168 Ga0500643_000827 3300053087 Bacteria 19981
169 Ga0500643_039284 3300053087 Bacteria 1399
170 Ga0500644_0000023 3300053088 Bacteria 97652
171 Ga0500644_0004261 3300053088 Bacteria 3574
172 Ga0500647_0084434 3300053091 Bacteria 1523
173 Ga0500583_0045630 3300053092 Bacteria 2013
174 Ga0500651_0025886 3300053093 Bacteria 3683
175 Ga0500566_0029244 3300053094 Bacteria 3219
176 Ga0500641_0001223 3300053096 Bacteria 9125
177 Ga0500641_0064631 3300053096 Bacteria 1529
178 Ga0500641_0125752 3300053096 Bacteria 1106
179 Ga0500555_002473 3300053103 Bacteria 5341
180 Ga0500555_006054 3300053103 Bacteria 3434
181 Ga0500556_0000579 3300053104 Bacteria 24337
182 Ga0500556_0013181 3300053104 Bacteria 2493
183 Ga0500556_0034430 3300053104 Bacteria 1743
184 Ga0500556_0129694 3300053104 Bacteria 988
185 Ga0500562_000797 3300053108 Bacteria 7694
186 Ga0500562_002321 3300053108 Bacteria 4772
187 Ga0500562_007764 3300053108 Bacteria 2706
188 Ga0500562_013846 3300053108 Bacteria 2062
189 Ga0500569_002128 3300053109 Bacteria 3854
190 Ga0500572_028779 3300053111 Bacteria 1532
191 Ga0500593_249029 3300053117 Bacteria 603
192 Ga0500594_0000260 3300053118 Bacteria 12370
193 Ga0500595_012779 3300053119 Bacteria 3235
194 Ga0500608_004345 3300053122 Bacteria 5472
195 Ga0500614_004201 3300053123 Bacteria 3056
196 Ga0500658_0143082 3300053134 Bacteria 1074
197 Ga0500559_0010378 3300053136 Bacteria 4001
198 Ga0500559_0247842 3300053136 Bacteria 839
199 Ga0500564_000042 3300053138 Bacteria 34776
200 Ga0500590_019883 3300053148 Bacteria 3481
201 Ga0500616_0068398 3300053153 Bacteria 1819
202 Ga0500619_004231 3300053154 Bacteria 3060
203 Ga0500622_0001332 3300053156 Bacteria 20003
204 Ga0500622_0056563 3300053156 Bacteria 2008
205 Ga0500627_0177826 3300053158 Bacteria 958
206 Ga0500638_032305 3300053162 Bacteria 2527
207 Ga0500639_099985 3300053163 Bacteria 1429
208 Ga0500636_0005352 3300053177 Bacteria 7318
209 Ga0500636_0118963 3300053177 Bacteria 1484
210 Ga0500637_0022253 3300053178 Bacteria 3451
211 Ga0500637_0067897 3300053178 Bacteria 2048
212 Ga0500645_000197 3300053730 Bacteria 46814
213 Ga0500645_005564 3300053730 Bacteria 4614
214 Ga0500609_000124 3300053731 Bacteria 10282
215 Ga0500596_000241 3300053735 Bacteria 9458
216 Ga0500661_019695 3300055283 Bacteria 1201
217 2585148412 2582581279 Bacteria 4980720
218 2585155297 2582581280 Bacteria 5994497
219 2585196567 2582581293 Bacteria 5907401
220 2643779274 2643221552 Bacteria 5708754
221 2644002035 2643221598 Bacteria 4578346
222 2792463800 2791355048 Bacteria 5832535
223 2819539988 2818991435 Bacteria 5433759
224 2819649012 2818991454 Bacteria 5563326
225 2843747899 2843744320 Bacteria 5659202
226 2849577046 2849573788 Bacteria 5421256
227 2857508820 2857504554 Bacteria 5369913
228 2898329643 2898329390 Bacteria 5168154
229 Ga0070671_100024749
230 rootL2_10095648
231 Ga0055524_1013271
232 Ga0055530_10016136
233 Ga0055530_10016306
234 Ga0055531_10000096
235 Ga0055531_10000659
236 Ga0070670_100000128
237 Ga0068869_100039184
238 Ga0070680_100087165
239 Ga0070680_100247139
240 Ga0070691_10077401
241 Ga0070661_100322512
242 Ga0070668_100062062
243 Ga0070671_100510078
244 Ga0070663_100280722
245 Ga0070662_100360352
246 Ga0070681_10014263
247 Ga0070679_100025741
248 Ga0070679_100858491
249 Ga0068853_100474396
250 Ga0068853_100497401
251 Ga0068855_100825999
252 Ga0070664_100189359
253 Ga0068864_100000154
254 Ga0068864_100365395
255 Ga0068863_100000172
256 Ga0068863_100114587
257 Ga0068863_100642710
258 Ga0068858_100001432
259 Ga0068862_100036867
260 Ga0075370_10029741
261 Ga0075370_10094362
262 Ga0105240_10001166
263 Ga0105240_10001551
264 Ga0105240_10256106
265 Ga0105240_10582963
266 Ga0105248_10047796
267 Ga0105248_10130084
268 Ga0105238_10214835
269 Ga0105238_10294472
270 Ga0105239_11161015
271 Ga0157347_1011267
272 Ga0157370_11132828
273 Ga0163163_10130767
274 Ga0157379_10035295
275 Ga0182006_1058090
276 Ga0209676_1000072
277 Ga0209676_1000469
278 Ga0209050_1000077
279 Ga0209050_1000322
280 Ga0209256_1002187
281 Ga0209257_1000088
282 Ga0209257_1000408
283 Ga0207696_1030455
284 Ga0207707_10030137
285 Ga0207695_10002753
286 Ga0207695_10003149
287 Ga0207695_10003707
288 Ga0207660_10154411
289 Ga0207652_10021335
290 Ga0207681_10267814
291 Ga0207650_10205769
292 Ga0207644_10027735
293 Ga0207691_10936174
294 Ga0207711_10112212
295 Ga0207689_10410304
296 Ga0207667_10393450
297 Ga0207667_10586374
298 Ga0207668_10272336
299 Ga0207703_10000586
300 Ga0207639_10317456
301 Ga0207639_10446860
302 Ga0207678_10040402
303 Ga0207702_10758934
304 Ga0207641_10000160
305 Ga0207676_10000375
306 Ga0207676_10679993
307 Ga0268266_10196100
308 Ga0268265_10097241
309 Ga0307517_10090609
310 Ga0307515_10046969
311 Ga0307515_10468983
312 Ga0265338_10007753
313 Ga0265327_10001783
314 Ga0307513_10005418
315 Ga0307513_10010658
316 Ga0307513_10014181
317 Ga0307516_10000002
318 Ga0373936_0012615
319 Ga0373925_0521962
320 Ga0395905_0155445
321 Ga0395901_0699700
322 Ga0436365_1486170
323 Ga0436361_1146848
324 Ga0439461_0036294
325 Ga0451853_2180335
326 Ga0439445_0032571
327 Ga0495590_0002727
328 Ga0495629_0107763
329 Ga0495638_0003013
330 Ga0495638_0013041
331 Ga0495650_0084026
332 Ga0495607_0019945
333 Ga0495606_0204871
334 Ga0495606_0284072
335 Ga0495610_0008117
336 Ga0495616_0000295
337 Ga0495631_0007691
338 Ga0495632_0001252
339 Ga0495632_0347415
340 Ga0495637_0058994
341 Ga0495643_0006921
342 Ga0495648_0000113
343 Ga0495654_0283738
344 Ga0495609_0022983
345 Ga0495597_0030554
346 Ga0495597_0059228
347 Ga0495645_0113138
348 Ga0495622_0000742
349 Ga0495668_0038636
350 Ga0495668_0040762
351 Ga0495668_0077055
352 Ga0495668_0176914
353 Ga0495668_0245854
354 Ga0495611_0103224
355 Ga0495625_0015292
356 Ga0495625_0043626
357 Ga0495625_0191593
358 Ga0495625_0191921
359 Ga0495669_0000001
360 Ga0495669_0036498
361 Ga0495669_0204280
362 Ga0495671_0074837
363 Ga0495660_0063641
364 Ga0495672_0198395
365 Ga0495673_0002609
366 Ga0495681_0096646
367 Ga0495686_0018914
368 Ga0496102_0061926
369 Ga0496103_0030953
370 Ga0496107_0273916
371 Ga0496112_0282802
372 Ga0496115_0058695
373 Ga0496116_0155392
374 Ga0496117_0012214
375 Ga0496118_0012583
376 Ga0496119_0020163
377 Ga0496121_0000009
378 Ga0496124_0020436
379 Ga0495678_001348
380 Ga0495682_0119399
381 Ga0501033_0000269
382 Ga0501034_0009798
383 Ga0501037_0039105
384 Ga0501038_0216983
385 Ga0501043_0415102
386 Ga0501043_0578315
387 Ga0501047_0002332
388 Ga0501047_0124980
389 Ga0501044_0000816
390 nmdc:mga0k408_130994_c1
391 nmdc:mga0k408_68270_c1
392 nmdc:mga07m45_280143_c1
393 Ga0500635_0000080
394 Ga0500578_0000005
395 Ga0500578_0354921
396 Ga0500643_000827
397 Ga0500643_039284
398 Ga0500644_0000023
399 Ga0500644_0004261
400 Ga0500647_0084434
401 Ga0500583_0045630
402 Ga0500651_0025886
403 Ga0500566_0029244
404 Ga0500641_0001223
405 Ga0500641_0064631
406 Ga0500641_0125752
407 Ga0500555_002473
408 Ga0500555_006054
409 Ga0500556_0000579
410 Ga0500556_0013181
411 Ga0500556_0034430
412 Ga0500556_0129694
413 Ga0500562_000797
414 Ga0500562_002321
415 Ga0500562_007764
416 Ga0500562_013846
417 Ga0500569_002128
418 Ga0500572_028779
419 Ga0500593_249029
420 Ga0500594_0000260
421 Ga0500595_012779
422 Ga0500608_004345
423 Ga0500614_004201
424 Ga0500658_0143082
425 Ga0500559_0010378
426 Ga0500559_0247842
427 Ga0500564_000042
428 Ga0500590_019883
429 Ga0500616_0068398
430 Ga0500619_004231
431 Ga0500622_0001332
432 Ga0500622_0056563
433 Ga0500627_0177826
434 Ga0500638_032305
435 Ga0500639_099985
436 Ga0500636_0005352
437 Ga0500636_0118963
438 Ga0500637_0022253
439 Ga0500637_0067897
440 Ga0500645_000197
441 Ga0500645_005564
442 Ga0500609_000124
443 Ga0500596_000241
444 Ga0500661_019695
445 2585148412
446 2585155297
447 2585196567
448 2643779274
449 2644002035
450 2792463800
451 2819539988
452 2819649012
453 2843747899
454 2849577046
455 2857508820
456 2898329643

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01135

PCMT

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

7

105

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4o29-assembly1.cif.gz_A protein-l-isoaspartate o-methyltransferase from pyrobaculum aerophilum in complex with s-adenosyl-l-homocysteine 0.8783 7 179
3lbf-assembly3.cif.gz_C crystal structure of protein l-isoaspartyl methyltransferase from escherichia coli 0.8612 9 179
1jg3-assembly1.cif.gz_A crystal structure of l-isoaspartyl (d-aspartyl) o-methyltransferase with adenosine & vyp(isp)ha substrate 0.8593 2 182
2yxe-assembly1.cif.gz_B crystal structure of l-isoaspartyl protein carboxyl methyltranferase 0.8572 4 181
1jg3-assembly1.cif.gz_A crystal structure of l-isoaspartyl (d-aspartyl) o-methyltransferase with adenosine & vyp(isp)ha substrate 0.8179 2 182
ID Description Score Start End Superfamily
4o29A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8783 7 179 3.40.50.150
1jg3A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8593 2 182 3.40.50.150
af_Q4E113_2_239_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8312 9 182 3.40.50.150
af_F1QIJ5_899_993_3.30.505.10 Alpha Beta;2-Layer Sandwich;SHC Adaptor Protein;SH2 domain 0.8275 140 172 3.30.505.10
1jg3A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8179 2 182 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A258CEY8-F1-model_v4 deleted 0.9835 4 190
AF-A0A258CEY8-F1-model_v4 deleted 0.9681 4 190
AF-A0A519KYN2-F1-model_v4 Protein-L-isoaspartate O-methyltransferase 0.9676 4 152 GO:0008168
GO:0032259
AF-V4P8T9-F1-model_v4 Protein-L-isoaspartate O-methyltransferase 0.9576 4 190 GO:0008168
GO:0032259
AF-A0A7C8LK31-F1-model_v4 Protein-L-isoaspartate O-methyltransferase (Protein L-isoaspartyl methyltransferase) 0.9546 4 190 GO:0004719
GO:0005737
GO:0032259
GO:0036211

Map