F340692

General Info

Members Datasets Scaffolds Average Seq Length
228 196 456 684

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10000660|Ga0070709_1000066012
Length 720
Sequence MNLMNWQRPLFVSLLLAVSALNASRVSQSQRDPGHPTVIGTVGQMPKSLPQTILFGAAYYEEYSPTDRLDEDVRMMKATGITVVRIAESTWGTLEPQEGVFDFSHVDRVLDAMDKANIKVIVGTPTYAIPTWLAREHPDILVVSPQGQAQYGRRQNMDISNQNFRDAAQRVIEALIDHVKDHPRVIGYQLDNETKSYETSGPNVQAAFVKWMRERHPDLATLNKEFGLDYWSNRINRWEDFPSANGSINASLSSAFAEFQRGLVTEYLAWQASLVRKHARGDQFVTQNFDLDWRGYSYGVQSEVNHFEAARALDVAGIDIYHPTQDHLTGAEIALGGDLARSMRGGQNYLVIETEAQGFPEWTPYPGQLRLQAFSHLASGANMVEYWHWGTTSNAIETYWRGLLSQDFKPNPTYEEAGTIGKDLARLGPDLVNMRKQNQIAIYVSNRALTAFNAFKFGWGSKVGYNDVLRPFYDALYRMNAEVDFVDPSTADLSRYRLIIVPALYAASDAEIQRLNDFAKTGGHVLYTFKSGFSDENVKVRSTAQPGMIAEAAGVHYNQFTIPEDVSLKEDPYGTGKADNTVRWWMELLTPTTATVVAKYHHPVWGKYAAITRNTYGKGEVTYVGFMPSDVLAEKILSEAVKRAGLWGTQQALHFPTIVKSGVLANGHVVHYVLNYSAAPARASYGFLAGKDLLSGDAVQKDGTIALPAWGVAVIEEGAR

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
16 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
17 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
18 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
32 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
34 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
35 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
59 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
62 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
65 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
66 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
67 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
73 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
74 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
75 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
86 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
87 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
88 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
89 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
90 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
98 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
99 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
100 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
101 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
102 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
109 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
110 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
113 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
114 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
115 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
116 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
117 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
118 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
119 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
120 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
121 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
122 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
123 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
124 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
125 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
126 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
127 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
128 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
129 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
130 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
131 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
132 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
133 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
134 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
135 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
136 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
137 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
138 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
139 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
140 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
141 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
142 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
143 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
144 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
145 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
146 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
147 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
148 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
149 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
150 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
151 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
152 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
153 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
154 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
155 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
156 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
157 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
158 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
159 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
160 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
161 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
162 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
163 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
164 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
165 2636415599 Klebsiella variicola DX120E Isolate Unclassified
166 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
167 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
168 2643221556 Massilia sp. Root1485 Isolate Unclassified
169 2643221584 Caulobacter sp. Root656 Isolate Unclassified
170 2643221640 Caulobacter sp. Root342 Isolate Unclassified
171 2643221642 Caulobacter sp. Root343 Isolate Unclassified
172 2643221645 Massilia sp. Root351 Isolate Unclassified
173 2643221664 Massilia sp. Root418 Isolate Unclassified
174 2643221684 Massilia sp. Root133 Isolate Unclassified
175 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
176 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
177 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
178 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
179 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
180 2775507074 Klebsiella sp. D5A Isolate Unclassified
181 2818991435 Caulobacter henricii 536 Isolate Unclassified
182 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
183 2858438669 Leuconostoc mesenteroides YL48 Isolate Unclassified
184 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
185 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
186 2904424332 Duganella sp. 1411 Isolate Rhizosphere
187 2904504865 Serratia marcescens 1822 Isolate Unclassified
188 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
189 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
190 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
191 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
192 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
193 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
194 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
195 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
196 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.98
Metatranscriptomes 0
Isolates 32.02

Biome Distribution

Category Percentage (%)
Aerial Root 0.88
Bulb 0
Endosphere 10.53
Nodule 0
Rhizoplane 17.98
Rhizosphere 55.7
Stem 0
Stem Tuber 0.44
Unclassified 0.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10000660 3300005434 Bacteria 19660
2 JGI24740J21852_10004253 3300001979 Bacteria 6167
3 JGI24744J21845_10001420 3300002077 Bacteria 4755
4 JGI25158J39367_1001215 3300002739 Bacteria 4631
5 rootL2_10076299 3300003322 Bacteria 3583
6 Ga0055524_1008119 3300003775 Bacteria 4387
7 Ga0055531_10003176 3300003794 Bacteria 10567
8 Ga0065165_1000739 3300005262 Bacteria 45310
9 Ga0070659_100001401 3300005366 Bacteria 17380
10 Ga0070713_100000471 3300005436 Bacteria 25656
11 Ga0070710_10040382 3300005437 Bacteria 2572
12 Ga0070711_100023768 3300005439 Bacteria 3991
13 Ga0070711_100026287 3300005439 Bacteria 3814
14 Ga0068861_100000111 3300005719 Bacteria 41057
15 Ga0068858_100000665 3300005842 Bacteria 35973
16 Ga0068871_100063181 3300006358 Unclassified 3027
17 Ga0105251_10001014 3300009011 Bacteria 24610
18 Ga0105251_10002578 3300009011 Bacteria 14060
19 Ga0105244_10001523 3300009036 Bacteria 18519
20 Ga0105250_10000046 3300009092 Bacteria 126280
21 Ga0105250_10000639 3300009092 Bacteria 22363
22 Ga0105245_10000277 3300009098 Bacteria 48499
23 Ga0105243_10001052 3300009148 Bacteria 25257
24 Ga0105248_10002988 3300009177 Bacteria 18744
25 Ga0105237_10001192 3300009545 Bacteria 34799
26 Ga0105237_10003465 3300009545 Bacteria 18709
27 Ga0105237_10022674 3300009545 Bacteria 6441
28 Ga0105238_10007570 3300009551 Bacteria 10881
29 Ga0105239_10000006 3300010375 Bacteria 442319
30 Ga0105239_10011635 3300010375 Bacteria 9818
31 Ga0105239_10056411 3300010375 Bacteria 4309
32 Ga0157371_10002496 3300013102 Bacteria 17483
33 Ga0157369_10010693 3300013105 Bacteria 10443
34 Ga0157378_10034253 3300013297 Bacteria 4490
35 Ga0157372_10000029 3300013307 Bacteria 180371
36 Ga0157376_10001181 3300014969 Bacteria 17206
37 Ga0163161_10039946 3300017792 Bacteria 3369
38 Ga0207425_1000036 3300025245 Bacteria 225783
39 Ga0209148_1000585 3300025254 Bacteria 33334
40 Ga0209129_1001239 3300025258 Bacteria 14649
41 Ga0209565_1000741 3300025263 Bacteria 19347
42 Ga0209564_1000758 3300025295 Bacteria 45570
43 Ga0209564_1007466 3300025295 Bacteria 5641
44 Ga0209050_1000040 3300025298 Bacteria 408492
45 Ga0209050_1001052 3300025298 Bacteria 33980
46 Ga0207426_1004319 3300025302 Bacteria 7003
47 Ga0209051_1014139 3300025303 Bacteria 3741
48 Ga0209257_1000054 3300025304 Bacteria 416957
49 Ga0207696_1000037 3300025711 Bacteria 334893
50 Ga0207696_1000049 3300025711 Bacteria 281296
51 Ga0207713_1000952 3300025735 Bacteria 25888
52 Ga0207713_1001004 3300025735 Bacteria 24615
53 Ga0207699_10010705 3300025906 Bacteria 4612
54 Ga0207671_10001288 3300025914 Bacteria 29500
55 Ga0207671_10002127 3300025914 Bacteria 21616
56 Ga0207671_10004978 3300025914 Bacteria 12444
57 Ga0207693_10000192 3300025915 Bacteria 55694
58 Ga0207663_10019063 3300025916 Bacteria 3856
59 Ga0207657_10044199 3300025919 Bacteria 3917
60 Ga0207694_10007702 3300025924 Bacteria 8161
61 Ga0207659_10001805 3300025926 Bacteria 12664
62 Ga0207687_10000271 3300025927 Bacteria 35431
63 Ga0207700_10001006 3300025928 Bacteria 16275
64 Ga0207709_10000764 3300025935 Bacteria 25367
65 Ga0207711_10011882 3300025941 Bacteria 7237
66 Ga0207703_10001611 3300026035 Bacteria 20384
67 Ga0207639_10107777 3300026041 Bacteria 2264
68 Ga0207675_100001549 3300026118 Bacteria 23025
69 Ga0209371_1000259 3300027312 Bacteria 64107
70 Ga0307515_10000016 3300028794 Bacteria 554870
71 Ga0307515_10086471 3300028794 Bacteria 3996
72 Ga0307515_10140969 3300028794 Bacteria 2586
73 Ga0268256_1000510 3300030500 Bacteria 32695
74 Ga0307509_10038286 3300031507 Bacteria 5234
75 Ga0307408_100000016 3300031548 Bacteria 356896
76 Ga0307408_100000241 3300031548 Bacteria 57327
77 Ga0307408_100000693 3300031548 Bacteria 27699
78 Ga0307408_100000916 3300031548 Bacteria 23009
79 Ga0265313_10002419 3300031595 Bacteria 16139
80 Ga0265342_10007177 3300031712 Bacteria 8199
81 Ga0307414_10017624 3300032004 Bacteria 4375
82 Ga0307411_10000207 3300032005 Bacteria 18989
83 Ga0373939_0000115 3300035114 Bacteria 24025
84 Ga0373961_0005747 3300035241 Bacteria 2977
85 Ga0373931_0000152 3300035691 Bacteria 30330
86 Ga0395899_0000024 3300037312 Bacteria 357402
87 Ga0395899_0003651 3300037312 Bacteria 12180
88 Ga0395900_0000826 3300037418 Bacteria 40904
89 Ga0395901_0000033 3300038443 Bacteria 232357
90 Ga0395901_0225295 3300038443 Bacteria 1959
91 Ga0436363_0027152 3300039450 Bacteria 5810
92 Ga0450890_001526 3300042127 Bacteria 3328
93 Ga0450889_000102 3300042144 Bacteria 8244
94 Ga0439458_0002097 3300042157 Bacteria 4944
95 Ga0466969_0013521 3300044656 Bacteria 4298
96 Ga0466961_0025942 3300044693 Bacteria 3767
97 Ga0466959_0035167 3300045049 Bacteria 3707
98 Ga0466958_0002500 3300045836 Bacteria 9266
99 Ga0466958_0009543 3300045836 Bacteria 5410
100 Ga0495638_0000001 3300046460 Bacteria 1114121
101 Ga0495638_0001629 3300046460 Bacteria 19966
102 Ga0495638_0017095 3300046460 Bacteria 4844
103 Ga0495580_0020784 3300046472 Bacteria 4852
104 Ga0495584_0001781 3300046491 Bacteria 12527
105 Ga0495607_0001893 3300046501 Bacteria 17752
106 Ga0495607_0007987 3300046501 Bacteria 7270
107 Ga0495583_0001548 3300046506 Bacteria 22788
108 Ga0495606_0000088 3300046507 Bacteria 155985
109 Ga0495606_0005367 3300046507 Bacteria 12296
110 Ga0495616_0000008 3300046513 Bacteria 226291
111 Ga0495616_0008049 3300046513 Bacteria 6278
112 Ga0495632_0000137 3300046519 Bacteria 74541
113 Ga0495648_0003506 3300046524 Bacteria 13756
114 Ga0495642_0009096 3300046528 Bacteria 3801
115 Ga0495654_0056750 3300046530 Bacteria 1892
116 Ga0495609_0000512 3300046538 Bacteria 31250
117 Ga0495645_0002438 3300046543 Bacteria 12617
118 Ga0495633_0015330 3300046558 Bacteria 3978
119 Ga0495633_0029963 3300046558 Bacteria 2645
120 Ga0495668_0004909 3300046616 Bacteria 9285
121 Ga0495625_0002003 3300046660 Bacteria 22982
122 Ga0495661_0055748 3300046665 Bacteria 2367
123 Ga0495588_0000126 3300046674 Bacteria 128815
124 Ga0495669_0001160 3300046684 Bacteria 10949
125 Ga0495660_0029294 3300046810 Bacteria 3107
126 Ga0495687_003102 3300047443 Bacteria 12437
127 Ga0495687_029010 3300047443 Bacteria 2566
128 Ga0495677_0005500 3300047445 Bacteria 4803
129 Ga0495679_012751 3300047446 Bacteria 3184
130 Ga0495681_0016614 3300047470 Bacteria 4115
131 Ga0495686_0000866 3300047472 Bacteria 38705
132 Ga0496100_0073314 3300048903 Bacteria 2291
133 Ga0496103_0001584 3300048906 Bacteria 14992
134 Ga0496105_0050093 3300048908 Bacteria 3450
135 Ga0496115_0077236 3300048918 Bacteria 2708
136 Ga0496122_0002114 3300048925 Bacteria 29420
137 Ga0496122_0036799 3300048925 Bacteria 3950
138 Ga0496123_0000673 3300048926 Bacteria 56422
139 Ga0496123_0004020 3300048926 Bacteria 15892
140 Ga0496123_0010471 3300048926 Bacteria 8193
141 Ga0496124_0000385 3300048927 Bacteria 80586
142 Ga0496126_0000959 3300048929 Bacteria 49499
143 Ga0501222_001542 3300049662 Bacteria 3215
144 Ga0501221_000701 3300049704 Bacteria 5392
145 Ga0501229_000736 3300049706 Bacteria 3694
146 Ga0495601_0003218 3300053077 Bacteria 9345
147 Ga0500644_0003699 3300053088 Unclassified 3797
148 Ga0500562_000003 3300053108 Bacteria 293779
149 Ga0500562_007252 3300053108 Bacteria 2798
150 Ga0500608_013358 3300053122 Bacteria 3638
151 Ga0500618_001563 3300053125 Bacteria 9998
152 Ga0500658_0000876 3300053134 Bacteria 12354
153 Ga0500616_0000051 3300053153 Bacteria 296240
154 Ga0500622_0001223 3300053156 Bacteria 21100
155 Ga0500609_001000 3300053731 Bacteria 4244
156 2511120734 2510917020 Bacteria 5657507
157 2555261753 2554235234 Bacteria 5762085
158 2585152459 2582581280 Bacteria 5994497
159 2585197581 2582581293 Bacteria 5907401
160 2587916767 2585428106 Bacteria 5179711
161 2599412419 2599185169 Bacteria 5441380
162 2599479355 2599185184 Bacteria 6430550
163 2600203731 2599185354 Bacteria 4398675
164 2601524854 2600255254 Bacteria 5281859
165 2601530158 2600255255 Bacteria 5282785
166 2601617238 2600255280 Bacteria 5292309
167 2601622075 2600255281 Bacteria 5288753
168 2601645620 2600255287 Bacteria 5210468
169 2601649994 2600255288 Bacteria 5282738
170 2601655284 2600255289 Bacteria 5281907
171 2601660519 2600255290 Bacteria 5282218
172 2601665759 2600255291 Bacteria 5217298
173 2601698617 2600255298 Bacteria 5215185
174 2601703768 2600255299 Bacteria 5218662
175 2601708041 2600255300 Bacteria 5287774
176 2601712984 2600255301 Bacteria 5280532
177 2601718298 2600255302 Bacteria 5288235
178 2601723704 2600255303 Bacteria 5219315
179 2601728585 2600255304 Bacteria 5283973
180 2601733246 2600255305 Bacteria 5282329
181 2601737642 2600255306 Bacteria 5281613
182 2601742027 2600255307 Bacteria 5439064
183 2601752961 2600255309 Bacteria 5431045
184 2602019449 2600255392 Bacteria 5437392
185 2603663293 2602042052 Bacteria 5215873
186 2603668495 2602042053 Bacteria 5214361
187 2603840913 2602042103 Bacteria 5284714
188 2603846100 2602042104 Bacteria 5281639
189 2603851060 2602042105 Bacteria 5282303
190 2603856242 2602042106 Bacteria 5282744
191 2603873821 2602042110 Bacteria 5283285
192 2603879109 2602042111 Bacteria 5212080
193 2606051001 2603880178 Bacteria 5283018
194 2606072918 2603880184 Bacteria 5217896
195 2606148573 2603880202 Bacteria 5284684
196 2606178893 2603880211 Bacteria 5284226
197 2637227421 2636415599 Bacteria 5718434
198 2643745423 2643221544 Bacteria 5886209
199 2643778818 2643221552 Bacteria 5708754
200 2643796787 2643221556 Bacteria 7251154
201 2643930664 2643221584 Bacteria 5511711
202 2644225702 2643221640 Bacteria 5258820
203 2644235095 2643221642 Bacteria 5357871
204 2644249979 2643221645 Bacteria 7207331
205 2644358658 2643221664 Bacteria 7272945
206 2644470108 2643221684 Bacteria 7145183
207 2644503325 2643221690 Bacteria 4654705
208 2676409272 2675903046 Bacteria 5451247
209 2738732067 2738541279 Bacteria 6149495
210 2738764632 2738541285 Bacteria 6150075
211 2739213647 2738543007 Bacteria 6149845
212 2777021791 2775507074 Bacteria 5532402
213 2819537178 2818991435 Bacteria 5433759
214 2819645590 2818991454 Bacteria 5563326
215 2858440350 2858438669 Bacteria 2058402
216 2871284763 2871282230 Bacteria 4917173
217 2884090742 2884086401 Bacteria 5005459
218 2904430454 2904424332 Bacteria 7633521
219 2904506055 2904504865 Bacteria 5152820
220 2919113385 2919108558 Bacteria 5897419
221 2919142209 2919138771 Bacteria 5281312
222 2928149082 2928147474 Bacteria 6512076
223 2928531501 2928531327 Bacteria 5101314
224 2945999809 2945997725 Bacteria 6404843
225 2971825935 2971820967 Bacteria 5823634
226 2984561576 2984559226 Bacteria 5683096
227 2984599641 2984595703 Bacteria 5682994
228 8054309646 8054307821 Bacteria 5212224
229 Ga0070709_10000660
230 JGI24740J21852_10004253
231 JGI24744J21845_10001420
232 JGI25158J39367_1001215
233 rootL2_10076299
234 Ga0055524_1008119
235 Ga0055531_10003176
236 Ga0065165_1000739
237 Ga0070659_100001401
238 Ga0070713_100000471
239 Ga0070710_10040382
240 Ga0070711_100023768
241 Ga0070711_100026287
242 Ga0068861_100000111
243 Ga0068858_100000665
244 Ga0068871_100063181
245 Ga0105251_10001014
246 Ga0105251_10002578
247 Ga0105244_10001523
248 Ga0105250_10000046
249 Ga0105250_10000639
250 Ga0105245_10000277
251 Ga0105243_10001052
252 Ga0105248_10002988
253 Ga0105237_10001192
254 Ga0105237_10003465
255 Ga0105237_10022674
256 Ga0105238_10007570
257 Ga0105239_10000006
258 Ga0105239_10011635
259 Ga0105239_10056411
260 Ga0157371_10002496
261 Ga0157369_10010693
262 Ga0157378_10034253
263 Ga0157372_10000029
264 Ga0157376_10001181
265 Ga0163161_10039946
266 Ga0207425_1000036
267 Ga0209148_1000585
268 Ga0209129_1001239
269 Ga0209565_1000741
270 Ga0209564_1000758
271 Ga0209564_1007466
272 Ga0209050_1000040
273 Ga0209050_1001052
274 Ga0207426_1004319
275 Ga0209051_1014139
276 Ga0209257_1000054
277 Ga0207696_1000037
278 Ga0207696_1000049
279 Ga0207713_1000952
280 Ga0207713_1001004
281 Ga0207699_10010705
282 Ga0207671_10001288
283 Ga0207671_10002127
284 Ga0207671_10004978
285 Ga0207693_10000192
286 Ga0207663_10019063
287 Ga0207657_10044199
288 Ga0207694_10007702
289 Ga0207659_10001805
290 Ga0207687_10000271
291 Ga0207700_10001006
292 Ga0207709_10000764
293 Ga0207711_10011882
294 Ga0207703_10001611
295 Ga0207639_10107777
296 Ga0207675_100001549
297 Ga0209371_1000259
298 Ga0307515_10000016
299 Ga0307515_10086471
300 Ga0307515_10140969
301 Ga0268256_1000510
302 Ga0307509_10038286
303 Ga0307408_100000016
304 Ga0307408_100000241
305 Ga0307408_100000693
306 Ga0307408_100000916
307 Ga0265313_10002419
308 Ga0265342_10007177
309 Ga0307414_10017624
310 Ga0307411_10000207
311 Ga0373939_0000115
312 Ga0373961_0005747
313 Ga0373931_0000152
314 Ga0395899_0000024
315 Ga0395899_0003651
316 Ga0395900_0000826
317 Ga0395901_0000033
318 Ga0395901_0225295
319 Ga0436363_0027152
320 Ga0450890_001526
321 Ga0450889_000102
322 Ga0439458_0002097
323 Ga0466969_0013521
324 Ga0466961_0025942
325 Ga0466959_0035167
326 Ga0466958_0002500
327 Ga0466958_0009543
328 Ga0495638_0000001
329 Ga0495638_0001629
330 Ga0495638_0017095
331 Ga0495580_0020784
332 Ga0495584_0001781
333 Ga0495607_0001893
334 Ga0495607_0007987
335 Ga0495583_0001548
336 Ga0495606_0000088
337 Ga0495606_0005367
338 Ga0495616_0000008
339 Ga0495616_0008049
340 Ga0495632_0000137
341 Ga0495648_0003506
342 Ga0495642_0009096
343 Ga0495654_0056750
344 Ga0495609_0000512
345 Ga0495645_0002438
346 Ga0495633_0015330
347 Ga0495633_0029963
348 Ga0495668_0004909
349 Ga0495625_0002003
350 Ga0495661_0055748
351 Ga0495588_0000126
352 Ga0495669_0001160
353 Ga0495660_0029294
354 Ga0495687_003102
355 Ga0495687_029010
356 Ga0495677_0005500
357 Ga0495679_012751
358 Ga0495681_0016614
359 Ga0495686_0000866
360 Ga0496100_0073314
361 Ga0496103_0001584
362 Ga0496105_0050093
363 Ga0496115_0077236
364 Ga0496122_0002114
365 Ga0496122_0036799
366 Ga0496123_0000673
367 Ga0496123_0004020
368 Ga0496123_0010471
369 Ga0496124_0000385
370 Ga0496126_0000959
371 Ga0501222_001542
372 Ga0501221_000701
373 Ga0501229_000736
374 Ga0495601_0003218
375 Ga0500644_0003699
376 Ga0500562_000003
377 Ga0500562_007252
378 Ga0500608_013358
379 Ga0500618_001563
380 Ga0500658_0000876
381 Ga0500616_0000051
382 Ga0500622_0001223
383 Ga0500609_001000
384 2511120734
385 2555261753
386 2585152459
387 2585197581
388 2587916767
389 2599412419
390 2599479355
391 2600203731
392 2601524854
393 2601530158
394 2601617238
395 2601622075
396 2601645620
397 2601649994
398 2601655284
399 2601660519
400 2601665759
401 2601698617
402 2601703768
403 2601708041
404 2601712984
405 2601718298
406 2601723704
407 2601728585
408 2601733246
409 2601737642
410 2601742027
411 2601752961
412 2602019449
413 2603663293
414 2603668495
415 2603840913
416 2603846100
417 2603851060
418 2603856242
419 2603873821
420 2603879109
421 2606051001
422 2606072918
423 2606148573
424 2606178893
425 2637227421
426 2643745423
427 2643778818
428 2643796787
429 2643930664
430 2644225702
431 2644235095
432 2644249979
433 2644358658
434 2644470108
435 2644503325
436 2676409272
437 2738732067
438 2738764632
439 2739213647
440 2777021791
441 2819537178
442 2819645590
443 2858440350
444 2871284763
445 2884090742
446 2904430454
447 2904506055
448 2919113385
449 2919142209
450 2928149082
451 2928531501
452 2945999809
453 2971825935
454 2984561576
455 2984599641
456 8054309646

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02449

Glyco_hydro_42

Beta-galactosidase

58

427

0.94

PF08532

Glyco_hydro_42M

Beta-galactosidase trimerisation domain

438

647

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xb7-assembly1.cif.gz_D gh42 alpha-l-arabinopyranosidase from bifidobacterium animalis subsp. lactis bl-04 0.973 14 677
5xb7-assembly2.cif.gz_B gh42 alpha-l-arabinopyranosidase from bifidobacterium animalis subsp. lactis bl-04 0.9722 14 678
5xb7-assembly2.cif.gz_F gh42 alpha-l-arabinopyranosidase from bifidobacterium animalis subsp. lactis bl-04 0.9711 14 677
5xb7-assembly2.cif.gz_B gh42 alpha-l-arabinopyranosidase from bifidobacterium animalis subsp. lactis bl-04 0.9524 14 678
5xb7-assembly1.cif.gz_D gh42 alpha-l-arabinopyranosidase from bifidobacterium animalis subsp. lactis bl-04 0.9518 14 677
ID Description Score Start End Superfamily
5dfaC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9214 10 394 3.20.20.80
4uoqB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9067 13 389 3.20.20.80
3ttsA03 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.906 618 678 2.60.40.1180
1kwkA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9058 15 388 3.20.20.80
3ttyF01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8931 13 394 3.20.20.80
ID Description Score Start End GO Terms
AF-H6CEB6-F1-model_v4 deleted 0.9937 218 678
AF-A0A519YAL4-F1-model_v4 Beta-galactosidase 0.9911 347 678 GO:0004565
GO:0006012
AF-A0A060C6V7-F1-model_v4 CAZy families GH42 protein 0.9908 214 318 GO:0004565
GO:0005975
GO:0009341
AF-A0A2J5PHE5-F1-model_v4 Beta-galactosidase 0.989 13 366 GO:0004565
GO:0005975
GO:0009341
AF-A0A7B4LYV6-F1-model_v4 deleted 0.9884 12 389

Map