F341964

General Info

Members Datasets Scaffolds Average Seq Length
229 173 212 207

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10058868|Ga0105240_100588682
Length 238
Sequence VEQGGDDDHRESGRGHAFDCRFSHLDVLEIPMLRILGKPTSINVRKVLWLCEELALAHELEPWGTGYRDTNTPEFLALNPNALVPVVVDGDAVLWESNTICRYLAGQAGRDDLLPHEPLARARIEQWMDWQAGDFNNAWRYAYMHLVRKSPAHQDAGAVAASAASWNRHVAMLDAQLARTGAHVAGPAFTLADIGIGLSVNRWYETPIERPALSHVRAYYERLSERAAFRLHGRNGMP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
3 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
4 2643221621 Achromobacter sp. Root83 Isolate Unclassified
5 2643221638 Duganella sp. Root336D2 Isolate Unclassified
6 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
7 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
8 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
9 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
10 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
11 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
12 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
13 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
14 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
15 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
16 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
17 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
18 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
19 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
20 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
21 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
22 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
23 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
24 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
25 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
26 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
27 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
28 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
29 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
30 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
31 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
32 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
33 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
34 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
37 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
38 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
39 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
40 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
41 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
54 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
73 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
74 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
77 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
109 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
110 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
111 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
116 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
117 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
123 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
124 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
125 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
128 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
131 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
132 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
133 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
134 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
135 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
136 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
137 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
138 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
139 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
144 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
145 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
148 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
149 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
150 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
151 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
158 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
159 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
160 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
161 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
162 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
163 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
167 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
168 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
169 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
170 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
171 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
172 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
173 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.58
Metatranscriptomes 0
Isolates 7.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.66
Nodule 0.87
Rhizoplane 1.75
Rhizosphere 69.43
Stem 0
Stem Tuber 1.75
Unclassified 13.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_127615 2162886007 Bacteria 5334
2 SwRhRL2b_contig_3802573 2162886007 Bacteria 9073
3 JGI25156J39149_1000473 3300002705 Bacteria 24243
4 JGI25157J39369_1000052 3300002741 Bacteria 110463
5 rootH1_10004046 3300003316 Bacteria 7204
6 rootH2_10019080 3300003320 Bacteria 6965
7 rootL2_10029276 3300003322 Bacteria 6710
8 rootH1_10025626 3300003323 Bacteria 7025
9 rootH1_10025628 3300003323 Bacteria 5498
10 Ga0055539_1000360 3300003752 Bacteria 19668
11 Ga0055539_1001129 3300003752 Bacteria 5526
12 Ga0055533_1000053 3300003756 Bacteria 199478
13 Ga0055525_1001200 3300003759 Bacteria 5785
14 Ga0055535_1000146 3300003761 Bacteria 74586
15 Ga0055529_1000219 3300003763 Bacteria 74582
16 Ga0055524_1000015 3300003775 Bacteria 246493
17 Ga0058692_1000368 3300003856 Bacteria 21725
18 Ga0065704_10000681 3300005289 Bacteria 14725
19 Ga0065704_10080997 3300005289 Bacteria 3841
20 Ga0070658_10009370 3300005327 Bacteria 7867
21 Ga0070658_10182837 3300005327 Bacteria 1764
22 Ga0070658_10423756 3300005327 Bacteria 1145
23 Ga0068869_100074965 3300005334 Bacteria 2513
24 Ga0070682_100389147 3300005337 Bacteria 1051
25 Ga0070660_100098810 3300005339 Bacteria 2311
26 Ga0070660_100121075 3300005339 Bacteria 2088
27 Ga0070660_100779504 3300005339 Bacteria 804
28 Ga0070659_100011819 3300005366 Bacteria 6463
29 Ga0070659_100223535 3300005366 Bacteria 1555
30 Ga0070659_100404076 3300005366 Bacteria 1153
31 Ga0070659_100610716 3300005366 Bacteria 938
32 Ga0070709_10077208 3300005434 Bacteria 2165
33 Ga0070714_100090724 3300005435 Bacteria 2676
34 Ga0070713_100083063 3300005436 Bacteria 2737
35 Ga0070710_10007852 3300005437 Bacteria 5181
36 Ga0070711_100010800 3300005439 Bacteria 5663
37 Ga0070681_10247774 3300005458 Bacteria 1694
38 Ga0070684_100611840 3300005535 Bacteria 1013
39 Ga0068853_100272835 3300005539 Bacteria 1558
40 Ga0068855_100013592 3300005563 Bacteria 9816
41 Ga0068855_100104972 3300005563 Bacteria 3249
42 Ga0068855_100447011 3300005563 Bacteria 1411
43 Ga0068857_100001102 3300005577 Bacteria 20972
44 Ga0068854_100012776 3300005578 Bacteria 5498
45 Ga0068856_100001785 3300005614 Bacteria 22477
46 Ga0068856_100354597 3300005614 Bacteria 1485
47 Ga0068852_100071251 3300005616 Bacteria 3051
48 Ga0068852_100496476 3300005616 Bacteria 1215
49 Ga0068861_100186692 3300005719 Bacteria 1729
50 Ga0068861_101289031 3300005719 Bacteria 710
51 Ga0075366_10021543 3300006195 Bacteria 3747
52 Ga0075366_10026150 3300006195 Bacteria 3417
53 Ga0075370_10044806 3300006353 Bacteria 2501
54 Ga0097620_100079210 3300006931 Bacteria 3325
55 Ga0105251_10020875 3300009011 Bacteria 3432
56 Ga0105244_10007612 3300009036 Bacteria 6864
57 Ga0105240_10058868 3300009093 Bacteria 4795
58 Ga0105240_10093056 3300009093 Bacteria 3680
59 Ga0105245_10630178 3300009098 Bacteria 1101
60 Ga0105243_10006132 3300009148 Bacteria 9295
61 Ga0105243_10178208 3300009148 Bacteria 1846
62 Ga0105243_10220665 3300009148 Bacteria 1676
63 Ga0105241_10012982 3300009174 Bacteria 6110
64 Ga0105242_10215969 3300009176 Bacteria 1711
65 Ga0105237_10072107 3300009545 Bacteria 3448
66 Ga0105237_10711477 3300009545 Bacteria 1011
67 Ga0105238_10035555 3300009551 Bacteria 5064
68 Ga0105239_10007349 3300010375 Bacteria 12655
69 Ga0157370_11005667 3300013104 Bacteria 755
70 Ga0157369_10045843 3300013105 Bacteria 4753
71 Ga0157372_10551639 3300013307 Bacteria 1343
72 Ga0157379_10933127 3300014968 Bacteria 825
73 Ga0213872_10000009 3300021361 Bacteria 221470
74 Ga0213872_10000041 3300021361 Bacteria 118955
75 Ga0213872_10028689 3300021361 Bacteria 2552
76 Ga0209674_100039 3300025226 Bacteria 402292
77 Ga0209563_100080 3300025230 Bacteria 199504
78 Ga0207427_100405 3300025231 Bacteria 25185
79 Ga0209258_100072 3300025242 Bacteria 274355
80 Ga0209258_100222 3300025242 Bacteria 107982
81 Ga0209646_1000076 3300025246 Bacteria 212891
82 Ga0209026_1000011 3300025250 Bacteria 507291
83 Ga0209677_100086 3300025253 Bacteria 112759
84 Ga0209677_100496 3300025253 Bacteria 22127
85 Ga0209677_100594 3300025253 Bacteria 19656
86 Ga0209148_1006430 3300025254 Bacteria 2547
87 Ga0209759_1000034 3300025256 Bacteria 271209
88 Ga0209759_1000814 3300025256 Bacteria 24829
89 Ga0209759_1002001 3300025256 Bacteria 9716
90 Ga0209455_1000053 3300025272 Bacteria 365949
91 Ga0209256_1000005 3300025299 Bacteria 1315082
92 Ga0207696_1000023 3300025711 Bacteria 422195
93 Ga0207655_1016417 3300025728 Bacteria 4049
94 Ga0207713_1028290 3300025735 Bacteria 2531
95 Ga0207692_10022623 3300025898 Bacteria 2895
96 Ga0207699_10152259 3300025906 Bacteria 1531
97 Ga0207705_10759960 3300025909 Bacteria 753
98 Ga0207654_10023525 3300025911 Bacteria 3301
99 Ga0207695_10050849 3300025913 Bacteria 4357
100 Ga0207695_10160961 3300025913 Bacteria 2176
101 Ga0207671_10141775 3300025914 Bacteria 1852
102 Ga0207663_10020324 3300025916 Bacteria 3758
103 Ga0207657_10075472 3300025919 Bacteria 2845
104 Ga0207657_10110272 3300025919 Bacteria 2273
105 Ga0207657_10172870 3300025919 Bacteria 1749
106 Ga0207649_10337936 3300025920 Bacteria 1111
107 Ga0207649_10365573 3300025920 Bacteria 1072
108 Ga0207652_10024033 3300025921 Bacteria 5055
109 Ga0207694_10063271 3300025924 Bacteria 2882
110 Ga0207690_10470302 3300025932 Bacteria 1013
111 Ga0207709_10006501 3300025935 Bacteria 6563
112 Ga0207709_10394117 3300025935 Bacteria 1057
113 Ga0207689_10010496 3300025942 Bacteria 7977
114 Ga0207667_10002808 3300025949 Bacteria 21579
115 Ga0207667_10084974 3300025949 Bacteria 3276
116 Ga0207667_10137951 3300025949 Bacteria 2511
117 Ga0207667_10396430 3300025949 Bacteria 1405
118 Ga0207667_10420762 3300025949 Bacteria 1359
119 Ga0207651_10065430 3300025960 Bacteria 2549
120 Ga0207640_10013095 3300025981 Bacteria 4744
121 Ga0207639_10085155 3300026041 Bacteria 2513
122 Ga0207702_10000392 3300026078 Bacteria 49946
123 Ga0207674_10013567 3300026116 Bacteria 9031
124 Ga0207675_100064457 3300026118 Bacteria 3425
125 Ga0207675_100552947 3300026118 Bacteria 1150
126 Ga0207698_10137966 3300026142 Bacteria 2096
127 Ga0207698_10381800 3300026142 Bacteria 1340
128 Ga0209371_1000061 3300027312 Bacteria 223014
129 Ga0209371_1000138 3300027312 Bacteria 120551
130 Ga0209371_1001123 3300027312 Bacteria 19743
131 Ga0268265_10051446 3300028380 Bacteria 3109
132 Ga0265336_10000014 3300028666 Bacteria 241247
133 Ga0307515_10110829 3300028794 Bacteria 3208
134 Ga0265324_10000660 3300029957 Bacteria 23270
135 Ga0268256_1000059 3300030500 Bacteria 223875
136 Ga0268256_1000587 3300030500 Bacteria 29060
137 Ga0307511_10095096 3300030521 Bacteria 1993
138 Ga0307509_10347582 3300031507 Bacteria 1208
139 Ga0307408_100535984 3300031548 Bacteria 1031
140 Ga0265313_10006684 3300031595 Bacteria 8083
141 Ga0265314_10001334 3300031711 Bacteria 27988
142 Ga0265342_10000841 3300031712 Bacteria 30728
143 Ga0307516_10000703 3300031730 Bacteria 45501
144 Ga0373950_0006958 3300034818 Bacteria 1743
145 Ga0373927_0174118 3300035695 Bacteria 1411
146 Ga0395899_0000145 3300037312 Bacteria 107297
147 Ga0395899_0104196 3300037312 Bacteria 2045
148 Ga0395898_0023266 3300037466 Bacteria 6262
149 Ga0395901_0189742 3300038443 Bacteria 2155
150 Ga0436361_0023827 3300039447 Bacteria 9576
151 Ga0436361_0106903 3300039447 Bacteria 9400
152 Ga0436361_0438991 3300039447 Bacteria 100787
153 Ga0436361_0572581 3300039447 Bacteria 116104
154 Ga0450902_000584 3300042137 Bacteria 4618
155 Ga0450905_033154 3300042142 Bacteria 802
156 Ga0450901_002066 3300042533 Bacteria 2220
157 Ga0466967_0802807 3300045976 Bacteria 934
158 Ga0495653_0005270 3300046463 Bacteria 10522
159 Ga0495650_0017168 3300046471 Bacteria 3637
160 Ga0495650_0065849 3300046471 Bacteria 1436
161 Ga0495585_0003250 3300046492 Bacteria 11080
162 Ga0495583_0000258 3300046506 Bacteria 87863
163 Ga0495606_0003269 3300046507 Bacteria 17372
164 Ga0495606_0005252 3300046507 Bacteria 12491
165 Ga0495606_0049432 3300046507 Bacteria 2757
166 Ga0495610_0014358 3300046512 Bacteria 4655
167 Ga0495616_0034654 3300046513 Bacteria 2619
168 Ga0495620_0000012 3300046515 Bacteria 166395
169 Ga0495632_0000089 3300046519 Bacteria 94441
170 Ga0495632_0141139 3300046519 Bacteria 1117
171 Ga0495643_0000593 3300046522 Bacteria 43905
172 Ga0495648_0000253 3300046524 Bacteria 60629
173 Ga0495648_0114624 3300046524 Bacteria 1459
174 Ga0495654_0001759 3300046530 Bacteria 14514
175 Ga0495597_0000628 3300046542 Bacteria 28802
176 Ga0495625_0042044 3300046660 Bacteria 3323
177 Ga0495661_0000027 3300046665 Bacteria 184297
178 Ga0495661_0103314 3300046665 Bacteria 1600
179 Ga0495623_0019534 3300046679 Bacteria 4378
180 Ga0495669_0016906 3300046684 Bacteria 3129
181 Ga0495649_0001667 3300046694 Bacteria 16502
182 Ga0495589_0003027 3300046794 Bacteria 9244
183 Ga0495660_0123458 3300046810 Bacteria 1307
184 Ga0495660_0127936 3300046810 Bacteria 1277
185 Ga0495683_0016127 3300047323 Bacteria 3880
186 Ga0495679_001610 3300047446 Bacteria 12619
187 Ga0495673_0003283 3300047469 Bacteria 10745
188 Ga0495686_0087860 3300047472 Bacteria 1890
189 Ga0495626_0058582 3300048091 Bacteria 1759
190 Ga0495626_0058583 3300048091 Bacteria 1759
191 Ga0496111_0133189 3300048914 Bacteria 1840
192 Ga0496114_0002158 3300048917 Bacteria 14977
193 Ga0496115_0626474 3300048918 Bacteria 853
194 Ga0496117_0000431 3300048920 Bacteria 70206
195 Ga0496117_0006891 3300048920 Bacteria 11273
196 Ga0496118_0001819 3300048921 Bacteria 30671
197 Ga0496119_0025713 3300048922 Bacteria 4104
198 Ga0496121_0348037 3300048924 Bacteria 988
199 Ga0496123_0260557 3300048926 Bacteria 850
200 Ga0496124_0057524 3300048927 Bacteria 3275
201 Ga0496125_0000893 3300048928 Bacteria 47285
202 Ga0496126_0077215 3300048929 Bacteria 2953
203 Ga0495678_015510 3300049459 Bacteria 3502
204 Ga0501044_0125510 3300049823 Bacteria 2564
205 nmdc:mga0k408_74239_c1 3300050493 Bacteria 1987
206 Ga0500646_0087781 3300053090 Bacteria 959
207 Ga0500559_0035292 3300053136 Bacteria 2159
208 Ga0500559_0112002 3300053136 Bacteria 1265
209 Ga0500624_037164 3300053157 Bacteria 862
210 Ga0500639_047209 3300053163 Bacteria 2250
211 Ga0500636_0081811 3300053177 Bacteria 1859
212 Ga0500661_018631 3300055283 Bacteria 1237

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0125510 Ga0501044_0125510_1972_2553 189
2 3300053090 Ga0500646_0087781 Ga0500646_0087781_339_920 189
3 3300009011 Ga0105251_10020875 Ga0105251_100208753 195
4 3300046515 Ga0495620_0000012 Ga0495620_0000012_45651_46238 195
5 3300046519 Ga0495632_0000089 Ga0495632_0000089_72728_73315 195
6 3300046522 Ga0495643_0000593 Ga0495643_0000593_17172_17759 195
7 3300046524 Ga0495648_0000253 Ga0495648_0000253_16436_17023 195
8 iso_pu_bacteria 2885080285 2885084897 197
9 iso_pu_bacteria 2513237083 2513566230 202
10 iso_pu_bacteria 2883087390 2883089123 202
11 iso_pu_bacteria 8003955200 8003962543 202
12 iso_pu_bacteria 2537561728 2538425012 203
13 iso_pu_bacteria 2643221621 2644120157 203
14 iso_pu_bacteria 2643221638 2644212021 203
15 iso_pu_bacteria 2747842501 2748019796 203
16 iso_pu_bacteria 2852103415 2852107719 203
17 iso_pu_bacteria 2857542790 2857544179 203
18 iso_pu_bacteria 2858466076 2858467344 203
19 iso_pu_bacteria 2871272651 2871276638 203
20 iso_pu_bacteria 2871282230 2871286181 203
21 iso_pu_bacteria 2900051742 2900053345 203
22 iso_pu_bacteria 2912963787 2912965997 203
23 iso_pu_bacteria 2919155634 2919156833 203
24 iso_pu_bacteria 8056137416 8056140470 203
25 3300021361 Ga0213872_10028689 Ga0213872_100286893 204
26 3300039447 Ga0436361_0106903 Ga0436361_0106903_7974_8600 204
27 3300046507 Ga0495606_0049432 Ga0495606_0049432_692_1306 204
28 3300046512 Ga0495610_0014358 Ga0495610_0014358_3449_4063 204
29 3300046513 Ga0495616_0034654 Ga0495616_0034654_1415_2029 204
30 3300046810 Ga0495660_0123458 Ga0495660_0123458_610_1224 204
31 3300005327 Ga0070658_10009370 Ga0070658_1000937010 205
32 3300005339 Ga0070660_100779504 Ga0070660_1007795041 205
33 3300005366 Ga0070659_100223535 Ga0070659_1002235352 205
34 3300005434 Ga0070709_10077208 Ga0070709_100772084 205
35 3300005435 Ga0070714_100090724 Ga0070714_1000907243 205
36 3300005436 Ga0070713_100083063 Ga0070713_1000830632 205
37 3300005437 Ga0070710_10007852 Ga0070710_100078524 205
38 3300005439 Ga0070711_100010800 Ga0070711_1000108006 205
39 3300005458 Ga0070681_10247774 Ga0070681_102477742 205
40 3300005614 Ga0068856_100354597 Ga0068856_1003545971 205
41 3300005616 Ga0068852_100071251 Ga0068852_1000712512 205
42 3300005616 Ga0068852_100496476 Ga0068852_1004964762 205
43 3300013104 Ga0157370_11005667 Ga0157370_110056671 205
44 3300013307 Ga0157372_10551639 Ga0157372_105516391 205
45 3300025898 Ga0207692_10022623 Ga0207692_100226233 205
46 3300025906 Ga0207699_10152259 Ga0207699_101522592 205
47 3300025916 Ga0207663_10020324 Ga0207663_100203244 205
48 3300025919 Ga0207657_10110272 Ga0207657_101102723 205
49 3300025920 Ga0207649_10337936 Ga0207649_103379361 205
50 3300025921 Ga0207652_10024033 Ga0207652_100240338 205
51 3300025932 Ga0207690_10470302 Ga0207690_104703022 205
52 3300031595 Ga0265313_10006684 Ga0265313_1000668410 205
53 3300031711 Ga0265314_10001334 Ga0265314_1000133422 205
54 3300031712 Ga0265342_10000841 Ga0265342_1000084123 205
55 3300034818 Ga0373950_0006958 Ga0373950_0006958_12_641 205
56 3300046679 Ga0495623_0019534 Ga0495623_0019534_474_1262 205
57 3300021361 Ga0213872_10000041 Ga0213872_1000004122 206
58 3300039447 Ga0436361_0438991 Ga0436361_0438991_30911_31537 206
59 3300045976 Ga0466967_0802807 Ga0466967_0802807_225_917 206
60 3300046524 Ga0495648_0114624 Ga0495648_0114624_506_1126 206
61 3300046665 Ga0495661_0103314 Ga0495661_0103314_948_1568 206
62 3300048091 Ga0495626_0058582 Ga0495626_0058582_611_1231 206
63 3300048091 Ga0495626_0058583 Ga0495626_0058583_529_1149 206
64 2162886007 SwRhRL2b_contig_127615 SwRhRL2b_0530.00006050 207
65 2162886007 SwRhRL2b_contig_3802573 SwRhRL2b_0125.00004840 207
66 3300002705 JGI25156J39149_1000473 JGI25156J39149_100047311 207
67 3300002741 JGI25157J39369_1000052 JGI25157J39369_100005265 207
68 3300003316 rootH1_10004046 rootH1_100040462 207
69 3300003320 rootH2_10019080 rootH2_100190802 207
70 3300003322 rootL2_10029276 rootL2_100292765 207
71 3300003323 rootH1_10025626 rootH1_100256265 207
72 3300003323 rootH1_10025628 rootH1_100256284 207
73 3300003752 Ga0055539_1000360 Ga0055539_10003607 207
74 3300003752 Ga0055539_1001129 Ga0055539_10011292 207
75 3300003756 Ga0055533_1000053 Ga0055533_100005394 207
76 3300003759 Ga0055525_1001200 Ga0055525_10012002 207
77 3300003761 Ga0055535_1000146 Ga0055535_100014630 207
78 3300003763 Ga0055529_1000219 Ga0055529_100021936 207
79 3300003775 Ga0055524_1000015 Ga0055524_1000015121 207
80 3300003856 Ga0058692_1000368 Ga0058692_10003685 207
81 3300005289 Ga0065704_10000681 Ga0065704_100006818 207
82 3300005289 Ga0065704_10080997 Ga0065704_100809972 207
83 3300005327 Ga0070658_10182837 Ga0070658_101828373 207
84 3300005327 Ga0070658_10423756 Ga0070658_104237561 207
85 3300005334 Ga0068869_100074965 Ga0068869_1000749652 207
86 3300005337 Ga0070682_100389147 Ga0070682_1003891472 207
87 3300005339 Ga0070660_100098810 Ga0070660_1000988103 207
88 3300005339 Ga0070660_100121075 Ga0070660_1001210752 207
89 3300005366 Ga0070659_100011819 Ga0070659_1000118192 207
90 3300005366 Ga0070659_100404076 Ga0070659_1004040762 207
91 3300005366 Ga0070659_100610716 Ga0070659_1006107161 207
92 3300005535 Ga0070684_100611840 Ga0070684_1006118401 207
93 3300005539 Ga0068853_100272835 Ga0068853_1002728352 207
94 3300005563 Ga0068855_100013592 Ga0068855_1000135922 207
95 3300005563 Ga0068855_100104972 Ga0068855_1001049722 207
96 3300005563 Ga0068855_100447011 Ga0068855_1004470111 207
97 3300005577 Ga0068857_100001102 Ga0068857_10000110213 207
98 3300005578 Ga0068854_100012776 Ga0068854_1000127764 207
99 3300005614 Ga0068856_100001785 Ga0068856_10000178510 207
100 3300005719 Ga0068861_100186692 Ga0068861_1001866922 207
101 3300005719 Ga0068861_101289031 Ga0068861_1012890311 207
102 3300006195 Ga0075366_10021543 Ga0075366_100215433 207
103 3300006195 Ga0075366_10026150 Ga0075366_100261502 207
104 3300006353 Ga0075370_10044806 Ga0075370_100448062 207
105 3300006931 Ga0097620_100079210 Ga0097620_1000792105 207
106 3300009036 Ga0105244_10007612 Ga0105244_100076122 207
107 3300009093 Ga0105240_10058868 Ga0105240_100588682 207
108 3300009093 Ga0105240_10093056 Ga0105240_100930563 207
109 3300009098 Ga0105245_10630178 Ga0105245_106301781 207
110 3300009148 Ga0105243_10006132 Ga0105243_100061326 207
111 3300009148 Ga0105243_10178208 Ga0105243_101782083 207
112 3300009148 Ga0105243_10220665 Ga0105243_102206652 207
113 3300009174 Ga0105241_10012982 Ga0105241_100129822 207
114 3300009176 Ga0105242_10215969 Ga0105242_102159693 207
115 3300009545 Ga0105237_10072107 Ga0105237_100721072 207
116 3300009545 Ga0105237_10711477 Ga0105237_107114772 207
117 3300009551 Ga0105238_10035555 Ga0105238_100355554 207
118 3300010375 Ga0105239_10007349 Ga0105239_100073495 207
119 3300013105 Ga0157369_10045843 Ga0157369_100458433 207
120 3300014968 Ga0157379_10933127 Ga0157379_109331271 207
121 3300021361 Ga0213872_10000009 Ga0213872_10000009163 207
122 3300025226 Ga0209674_100039 Ga0209674_10003999 207
123 3300025230 Ga0209563_100080 Ga0209563_10008099 207
124 3300025231 Ga0207427_100405 Ga0207427_1004053 207
125 3300025242 Ga0209258_100072 Ga0209258_10007268 207
126 3300025242 Ga0209258_100222 Ga0209258_10022267 207
127 3300025246 Ga0209646_1000076 Ga0209646_100007665 207
128 3300025250 Ga0209026_1000011 Ga0209026_1000011249 207
129 3300025253 Ga0209677_100086 Ga0209677_10008699 207
130 3300025253 Ga0209677_100496 Ga0209677_1004967 207
131 3300025253 Ga0209677_100594 Ga0209677_10059420 207
132 3300025254 Ga0209148_1006430 Ga0209148_10064302 207
133 3300025256 Ga0209759_1000034 Ga0209759_1000034227 207
134 3300025256 Ga0209759_1000814 Ga0209759_10008149 207
135 3300025256 Ga0209759_1002001 Ga0209759_10020013 207
136 3300025272 Ga0209455_1000053 Ga0209455_1000053148 207
137 3300025299 Ga0209256_1000005 Ga0209256_1000005122 207
138 3300025711 Ga0207696_1000023 Ga0207696_1000023152 207
139 3300025728 Ga0207655_1016417 Ga0207655_10164172 207
140 3300025735 Ga0207713_1028290 Ga0207713_10282902 207
141 3300025909 Ga0207705_10759960 Ga0207705_107599601 207
142 3300025911 Ga0207654_10023525 Ga0207654_100235252 207
143 3300025913 Ga0207695_10050849 Ga0207695_100508493 207
144 3300025913 Ga0207695_10160961 Ga0207695_101609612 207
145 3300025914 Ga0207671_10141775 Ga0207671_101417752 207
146 3300025919 Ga0207657_10075472 Ga0207657_100754722 207
147 3300025919 Ga0207657_10172870 Ga0207657_101728703 207
148 3300025920 Ga0207649_10365573 Ga0207649_103655732 207
149 3300025924 Ga0207694_10063271 Ga0207694_100632711 207
150 3300025935 Ga0207709_10006501 Ga0207709_100065013 207
151 3300025935 Ga0207709_10394117 Ga0207709_103941172 207
152 3300025942 Ga0207689_10010496 Ga0207689_100104963 207
153 3300025949 Ga0207667_10002808 Ga0207667_1000280812 207
154 3300025949 Ga0207667_10084974 Ga0207667_100849741 207
155 3300025949 Ga0207667_10137951 Ga0207667_101379513 207
156 3300025949 Ga0207667_10396430 Ga0207667_103964302 207
157 3300025949 Ga0207667_10420762 Ga0207667_104207621 207
158 3300025960 Ga0207651_10065430 Ga0207651_100654302 207
159 3300025981 Ga0207640_10013095 Ga0207640_100130955 207
160 3300026041 Ga0207639_10085155 Ga0207639_100851553 207
161 3300026078 Ga0207702_10000392 Ga0207702_1000039225 207
162 3300026116 Ga0207674_10013567 Ga0207674_100135677 207
163 3300026118 Ga0207675_100064457 Ga0207675_1000644572 207
164 3300026118 Ga0207675_100552947 Ga0207675_1005529472 207
165 3300026142 Ga0207698_10137966 Ga0207698_101379662 207
166 3300026142 Ga0207698_10381800 Ga0207698_103818002 207
167 3300027312 Ga0209371_1000061 Ga0209371_100006120 207
168 3300027312 Ga0209371_1000138 Ga0209371_100013820 207
169 3300027312 Ga0209371_1001123 Ga0209371_10011234 207
170 3300028380 Ga0268265_10051446 Ga0268265_100514462 207
171 3300028666 Ga0265336_10000014 Ga0265336_10000014123 207
172 3300028794 Ga0307515_10110829 Ga0307515_101108292 207
173 3300029957 Ga0265324_10000660 Ga0265324_1000066011 207
174 3300030500 Ga0268256_1000059 Ga0268256_1000059195 207
175 3300030500 Ga0268256_1000587 Ga0268256_10005877 207
176 3300030521 Ga0307511_10095096 Ga0307511_100950962 207
177 3300031507 Ga0307509_10347582 Ga0307509_103475822 207
178 3300031548 Ga0307408_100535984 Ga0307408_1005359842 207
179 3300031730 Ga0307516_10000703 Ga0307516_1000070311 207
180 3300035695 Ga0373927_0174118 Ga0373927_0174118_473_1096 207
181 3300037312 Ga0395899_0000145 Ga0395899_0000145_32146_32769 207
182 3300037312 Ga0395899_0104196 Ga0395899_0104196_512_1135 207
183 3300037466 Ga0395898_0023266 Ga0395898_0023266_4329_4952 207
184 3300038443 Ga0395901_0189742 Ga0395901_0189742_1321_1944 207
185 3300039447 Ga0436361_0023827 Ga0436361_0023827_5533_6168 207
186 3300039447 Ga0436361_0572581 Ga0436361_0572581_25375_26010 207
187 3300042137 Ga0450902_000584 Ga0450902_000584_3004_3627 207
188 3300042142 Ga0450905_033154 Ga0450905_033154_151_774 207
189 3300042533 Ga0450901_002066 Ga0450901_002066_580_1203 207
190 3300046463 Ga0495653_0005270 Ga0495653_0005270_6086_6748 207
191 3300046471 Ga0495650_0017168 Ga0495650_0017168_1719_2342 207
192 3300046471 Ga0495650_0065849 Ga0495650_0065849_10_672 207
193 3300046492 Ga0495585_0003250 Ga0495585_0003250_3625_4287 207
194 3300046506 Ga0495583_0000258 Ga0495583_0000258_32146_32769 207
195 3300046507 Ga0495606_0003269 Ga0495606_0003269_6872_7495 207
196 3300046507 Ga0495606_0005252 Ga0495606_0005252_7550_8212 207
197 3300046519 Ga0495632_0141139 Ga0495632_0141139_108_731 207
198 3300046530 Ga0495654_0001759 Ga0495654_0001759_2077_2700 207
199 3300046542 Ga0495597_0000628 Ga0495597_0000628_4588_5211 207
200 3300046660 Ga0495625_0042044 Ga0495625_0042044_260_883 207
201 3300046665 Ga0495661_0000027 Ga0495661_0000027_45371_46033 207
202 3300046684 Ga0495669_0016906 Ga0495669_0016906_1675_2298 207
203 3300046694 Ga0495649_0001667 Ga0495649_0001667_420_1043 207
204 3300046794 Ga0495589_0003027 Ga0495589_0003027_5545_6168 207
205 3300046810 Ga0495660_0127936 Ga0495660_0127936_375_998 207
206 3300047323 Ga0495683_0016127 Ga0495683_0016127_2401_3024 207
207 3300047446 Ga0495679_001610 Ga0495679_001610_11830_12453 207
208 3300047469 Ga0495673_0003283 Ga0495673_0003283_9668_10291 207
209 3300047472 Ga0495686_0087860 Ga0495686_0087860_240_863 207
210 3300048914 Ga0496111_0133189 Ga0496111_0133189_834_1457 207
211 3300048917 Ga0496114_0002158 Ga0496114_0002158_10348_10971 207
212 3300048918 Ga0496115_0626474 Ga0496115_0626474_64_687 207
213 3300048920 Ga0496117_0000431 Ga0496117_0000431_8824_9447 207
214 3300048920 Ga0496117_0006891 Ga0496117_0006891_4281_4904 207
215 3300048921 Ga0496118_0001819 Ga0496118_0001819_26342_26965 207
216 3300048922 Ga0496119_0025713 Ga0496119_0025713_2674_3297 207
217 3300048924 Ga0496121_0348037 Ga0496121_0348037_234_857 207
218 3300048926 Ga0496123_0260557 Ga0496123_0260557_122_745 207
219 3300048927 Ga0496124_0057524 Ga0496124_0057524_1851_2474 207
220 3300048928 Ga0496125_0000893 Ga0496125_0000893_26271_26894 207
221 3300048929 Ga0496126_0077215 Ga0496126_0077215_1578_2201 207
222 3300049459 Ga0495678_015510 Ga0495678_015510_441_1103 207
223 3300050493 nmdc:mga0k408_74239_c1 nmdc:mga0k408_74239_c1_353_976 207
224 3300053136 Ga0500559_0035292 Ga0500559_0035292_407_1030 207
225 3300053136 Ga0500559_0112002 Ga0500559_0112002_495_1118 207
226 3300053157 Ga0500624_037164 Ga0500624_037164_178_801 207
227 3300053163 Ga0500639_047209 Ga0500639_047209_157_780 207
228 3300053177 Ga0500636_0081811 Ga0500636_0081811_741_1364 207
229 3300055283 Ga0500661_018631 Ga0500661_018631_311_934 207

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

31

106

0.95

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

36

112

0.89

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

40

107

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ke3-assembly4.cif.gz_D crystal structure of a glutathione transferase family member from burkholderia graminis, target efi-507264, no gsh, disordered domains, space group p21, form(2) 0.99 1 207
4ke3-assembly2.cif.gz_B crystal structure of a glutathione transferase family member from burkholderia graminis, target efi-507264, no gsh, disordered domains, space group p21, form(2) 0.9892 1 207
4ke3-assembly4.cif.gz_D crystal structure of a glutathione transferase family member from burkholderia graminis, target efi-507264, no gsh, disordered domains, space group p21, form(2) 0.9847 1 207
4iel-assembly1.cif.gz_A-2 crystal structure of a glutathione s-transferase family protein from burkholderia ambifaria, target efi-507141, with bound glutathione 0.9823 1 207
4iel-assembly2.cif.gz_B-3 crystal structure of a glutathione s-transferase family protein from burkholderia ambifaria, target efi-507141, with bound glutathione 0.9818 3 207
ID Description Score Start End Superfamily
4ke3D01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9929 1 83 3.40.30.10
4ke3A01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9846 1 83 3.40.30.10
4ielB02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9839 84 201 1.20.1050.10
4ke3D01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9771 1 83 3.40.30.10
4ke3A01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.973 1 83 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A0K3A901-F1-model_v4 Glutathione S-transferase 1 98 207 GO:0016740
AF-A0A7X1W080-F1-model_v4 deleted 0.9979 1 207
AF-A0A0H3I0E1-F1-model_v4 Glutathione S-transferase family protein 0.9973 52 207
AF-A0A0E1FFQ5-F1-model_v4 Glutathione S-transferase 0.9946 1 207 GO:0004364
AF-A0A3M5P1G3-F1-model_v4 Glutathione S-transferase protein 0.9944 1 166 GO:0005737
GO:0016740

Feature Viewer

pLDDT pTM Quality
97.11 0.93 High
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Predicted Structure (AlphaFold2)

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