F342114

General Info

Members Datasets Scaffolds Average Seq Length
229 134 458 344

Family's Representative Sequence

Representative Sequence 3300026035|Ga0207703_10403684|Ga0207703_104036841
Length 386
Sequence LASTPTDVGRCAIFTERTCSKIFAARRATCAPGWSSWEGIFDRPGRDAEIEKLEEQAARPDLWDDAAGAQALLQRLSQLREAVAPYKALEARLDDLEVMGDLLVEAGEADTDERRLVADLDRLELETLLSGEHDAADAIVEIKAGAGGTDACDWVTMLREMYLKWAALRGYRTEVIDESEAEVAGLKNTTFLIHGKNAYGYLLSERGVHRLVRISPFDANKRRQTSFASVDVLPDLGEEVAVDINPDDLRIDYYRSSGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQHKNKAMAMHVLQARLLEREQRENEEKLATLRGESKANEWGNQDRSYVFQPYTLVKDLRTGYETGDIVGVMNGELDPFMQSWLQWQQARRQPEEARS

Samples

Sample ID Description Type Environment
1 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
60 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
61 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
62 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
63 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
64 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
65 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
66 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
69 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
70 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
71 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
72 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
73 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
74 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
75 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
76 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
79 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
89 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
90 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
91 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
92 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
93 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
104 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
129 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
130 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
131 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
132 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
133 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
134 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.69
Metatranscriptomes 0.87
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.62
Nodule 0
Rhizoplane 0.44
Rhizosphere 93.01
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207703_10403684 3300026035 Bacteria 1268
2 rootL2_10025387 3300003322 Bacteria 10254
3 Ga0070658_10001479 3300005327 Bacteria 19977
4 Ga0070658_10094795 3300005327 Bacteria 2463
5 Ga0070676_10000001 3300005328 Bacteria 443830
6 Ga0070683_100015992 3300005329 Bacteria 6602
7 Ga0068869_100000064 3300005334 Bacteria 47699
8 Ga0068868_100106351 3300005338 Bacteria 2276
9 Ga0070714_100365622 3300005435 Bacteria 1357
10 Ga0070713_100011552 3300005436 Bacteria 6436
11 Ga0070713_100094612 3300005436 Bacteria 2576
12 Ga0070708_100001312 3300005445 Bacteria 19055
13 Ga0070706_100008092 3300005467 Bacteria 9804
14 Ga0070706_100166277 3300005467 Bacteria 2060
15 Ga0070706_100408667 3300005467 Bacteria 1264
16 Ga0070707_100019382 3300005468 Bacteria 6409
17 Ga0070679_100001704 3300005530 Bacteria 19803
18 Ga0070684_100193761 3300005535 Bacteria 1850
19 Ga0070665_100001002 3300005548 Bacteria 35841
20 Ga0068855_100022179 3300005563 Bacteria 7608
21 Ga0068857_100016055 3300005577 Bacteria 6561
22 Ga0068856_100028688 3300005614 Bacteria 5437
23 Ga0068856_100041797 3300005614 Bacteria 4507
24 Ga0068864_100234505 3300005618 Bacteria 1698
25 Ga0068863_100502295 3300005841 Bacteria 1194
26 Ga0081455_10016282 3300005937 Bacteria 7184
27 Ga0070717_10000015 3300006028 Bacteria 208620
28 Ga0097621_100004656 3300006237 Bacteria 9581
29 Ga0068871_100002960 3300006358 Bacteria 11654
30 Ga0075430_100008250 3300006846 Bacteria 8797
31 Ga0075431_100131483 3300006847 Bacteria 2581
32 Ga0075431_100311934 3300006847 Bacteria 1588
33 Ga0068865_100003759 3300006881 Bacteria 9107
34 Ga0075435_100177894 3300007076 Bacteria 1797
35 Ga0105240_10003674 3300009093 Bacteria 23738
36 Ga0111539_10028935 3300009094 Bacteria 6757
37 Ga0105242_10029467 3300009176 Bacteria 4378
38 Ga0105237_10013032 3300009545 Bacteria 8729
39 Ga0105239_10348358 3300010375 Bacteria 1672
40 Ga0157369_10221750 3300013105 Bacteria 1979
41 Ga0157374_10110010 3300013296 Bacteria 2650
42 Ga0157378_10043360 3300013297 Bacteria 3994
43 Ga0157378_10097317 3300013297 Bacteria 2682
44 Ga0206350_10826969 3300020080 Bacteria 1542
45 Ga0213872_10008591 3300021361 Bacteria 4939
46 Ga0213872_10022214 3300021361 Bacteria 2922
47 Ga0213876_10007811 3300021384 Bacteria 5804
48 Ga0213871_10003880 3300021441 Bacteria 2936
49 Ga0213871_10008348 3300021441 Bacteria 2280
50 Ga0224712_10025720 3300022467 Bacteria 2072
51 Ga0207645_10000001 3300025907 Bacteria 442754
52 Ga0207705_10002779 3300025909 Bacteria 13378
53 Ga0207684_10001985 3300025910 Bacteria 21095
54 Ga0207684_10344745 3300025910 Bacteria 1283
55 Ga0207695_10036922 3300025913 Bacteria 5276
56 Ga0207652_10006008 3300025921 Bacteria 9825
57 Ga0207646_10010994 3300025922 Bacteria 8791
58 Ga0207646_10121148 3300025922 Bacteria 2350
59 Ga0207646_10175598 3300025922 Bacteria 1935
60 Ga0207700_10077464 3300025928 Bacteria 2583
61 Ga0207700_10273147 3300025928 Bacteria 1451
62 Ga0207664_10310107 3300025929 Bacteria 1390
63 Ga0207686_10138333 3300025934 Bacteria 1680
64 Ga0207704_10071617 3300025938 Bacteria 2200
65 Ga0207689_10000955 3300025942 Bacteria 27814
66 Ga0207661_10001565 3300025944 Bacteria 15573
67 Ga0207667_10010817 3300025949 Bacteria 10640
68 Ga0207667_10098831 3300025949 Bacteria 3011
69 Ga0207677_10087273 3300026023 Bacteria 2258
70 Ga0207702_10002820 3300026078 Bacteria 16254
71 Ga0207674_10060168 3300026116 Bacteria 3842
72 Ga0268266_10005760 3300028379 Bacteria 11468
73 Ga0265337_1000904 3300028556 Bacteria 15610
74 Ga0265337_1001096 3300028556 Bacteria 13911
75 Ga0265337_1035676 3300028556 Bacteria 1455
76 Ga0265326_10024638 3300028558 Bacteria 1717
77 Ga0265319_1000050 3300028563 Bacteria 97690
78 Ga0265319_1000767 3300028563 Bacteria 20851
79 Ga0265319_1001832 3300028563 Bacteria 12116
80 Ga0265319_1004329 3300028563 Bacteria 7048
81 Ga0265319_1005943 3300028563 Bacteria 5734
82 Ga0265319_1046950 3300028563 Bacteria 1438
83 Ga0265334_10002591 3300028573 Bacteria 8429
84 Ga0265334_10087382 3300028573 Bacteria 1141
85 Ga0265318_10000002 3300028577 Bacteria 428208
86 Ga0265318_10000524 3300028577 Bacteria 27594
87 Ga0265318_10002176 3300028577 Bacteria 10610
88 Ga0265318_10002624 3300028577 Bacteria 9494
89 Ga0265318_10007086 3300028577 Bacteria 5101
90 Ga0265323_10001893 3300028653 Bacteria 9875
91 Ga0265323_10022078 3300028653 Bacteria 2434
92 Ga0265322_10000126 3300028654 Bacteria 35415
93 Ga0265322_10008787 3300028654 Bacteria 2940
94 Ga0265322_10013712 3300028654 Bacteria 2347
95 Ga0265322_10042508 3300028654 Bacteria 1293
96 Ga0265336_10001623 3300028666 Bacteria 10016
97 Ga0265338_10000339 3300028800 Bacteria 85119
98 Ga0265338_10011695 3300028800 Bacteria 10105
99 Ga0265338_10027559 3300028800 Bacteria 5697
100 Ga0265338_10170655 3300028800 Bacteria 1669
101 Ga0265324_10001190 3300029957 Bacteria 15510
102 Ga0265324_10002597 3300029957 Bacteria 9074
103 Ga0265330_10038559 3300031235 Bacteria 2124
104 Ga0265332_10089694 3300031238 Bacteria 1301
105 Ga0265320_10000278 3300031240 Bacteria 41319
106 Ga0265320_10001566 3300031240 Bacteria 16451
107 Ga0265320_10002730 3300031240 Bacteria 12208
108 Ga0265320_10005332 3300031240 Bacteria 8270
109 Ga0265320_10005483 3300031240 Bacteria 8133
110 Ga0265320_10007561 3300031240 Bacteria 6733
111 Ga0265320_10009259 3300031240 Bacteria 5953
112 Ga0265320_10018503 3300031240 Bacteria 3834
113 Ga0265325_10002576 3300031241 Bacteria 12164
114 Ga0265325_10037712 3300031241 Bacteria 2554
115 Ga0265340_10048897 3300031247 Bacteria 2055
116 Ga0265331_10006842 3300031250 Bacteria 6671
117 Ga0265327_10000325 3300031251 Bacteria 90949
118 Ga0265327_10003471 3300031251 Bacteria 14999
119 Ga0265327_10042201 3300031251 Bacteria 2451
120 Ga0265327_10097256 3300031251 Bacteria 1426
121 Ga0265316_10005264 3300031344 Bacteria 12631
122 Ga0265316_10007202 3300031344 Bacteria 10510
123 Ga0265316_10007367 3300031344 Bacteria 10368
124 Ga0265316_10050285 3300031344 Bacteria 3278
125 Ga0307408_100000003 3300031548 Bacteria 618438
126 Ga0265313_10000016 3300031595 Bacteria 154004
127 Ga0265313_10001453 3300031595 Bacteria 22105
128 Ga0265313_10001771 3300031595 Bacteria 19787
129 Ga0265313_10001992 3300031595 Bacteria 18417
130 Ga0265313_10003814 3300031595 Bacteria 11912
131 Ga0265313_10006230 3300031595 Bacteria 8518
132 Ga0265313_10032118 3300031595 Bacteria 2685
133 Ga0307508_10000006 3300031616 Bacteria 275479
134 Ga0265314_10000662 3300031711 Bacteria 42133
135 Ga0265314_10003649 3300031711 Bacteria 14806
136 Ga0265314_10003785 3300031711 Bacteria 14457
137 Ga0265314_10004180 3300031711 Bacteria 13571
138 Ga0265314_10030628 3300031711 Bacteria 3979
139 Ga0265342_10007946 3300031712 Bacteria 7691
140 Ga0265342_10015457 3300031712 Bacteria 5019
141 Ga0265342_10038121 3300031712 Bacteria 2928
142 Ga0265342_10061677 3300031712 Bacteria 2208
143 Ga0265342_10143119 3300031712 Bacteria 1333
144 Ga0307410_10000002 3300031852 Bacteria 145309
145 Ga0307410_10001209 3300031852 Bacteria 11468
146 Ga0307407_10223079 3300031903 Bacteria 1275
147 Ga0307412_10085584 3300031911 Bacteria 2191
148 Ga0307409_100000226 3300031995 Bacteria 22640
149 Ga0307409_100000246 3300031995 Bacteria 21827
150 Ga0307416_100000012 3300032002 Bacteria 296814
151 Ga0307411_10008386 3300032005 Bacteria 5349
152 Ga0373951_0004396 3300035091 Bacteria 3349
153 Ga0373945_0014405 3300035116 Bacteria 2649
154 Ga0373943_0000565 3300035170 Bacteria 16050
155 Ga0373946_0011787 3300035171 Bacteria 3269
156 Ga0373935_0001740 3300035692 Bacteria 12212
157 Ga0373927_0000196 3300035695 Bacteria 48631
158 Ga0373933_0028738 3300035724 Bacteria 3210
159 Ga0395905_0000096 3300037471 Bacteria 146075
160 Ga0436364_0747413 3300037853 Bacteria 3089
161 Ga0436364_0924198 3300037853 Bacteria 3138
162 Ga0400489_81319 3300039093 Bacteria 16146
163 Ga0436365_1607764 3300039437 Bacteria 43225
164 Ga0436360_0653558 3300039438 Bacteria 3575
165 Ga0436360_0915325 3300039438 Bacteria 2985
166 Ga0436361_0088062 3300039447 Bacteria 5574
167 Ga0436361_0361144 3300039447 Bacteria 3137
168 Ga0436361_0508340 3300039447 Bacteria 14498
169 Ga0436363_1521891 3300039450 Bacteria 9388
170 Ga0436362_0398462 3300039453 Bacteria 1646
171 Ga0451795_0858225 3300041456 Bacteria 4088
172 Ga0439431_0037643 3300041997 Bacteria 1222
173 Ga0451577_0029082 3300042876 Bacteria 4996
174 Ga0451577_0036113 3300042876 Bacteria 4451
175 Ga0451577_0074830 3300042876 Bacteria 3020
176 Ga0451577_0118232 3300042876 Bacteria 2374
177 Ga0453683_0006957 3300044673 Bacteria 7712
178 Ga0453684_0000001 3300044712 Bacteria 2623166
179 Ga0453684_0004738 3300044712 Bacteria 28106
180 Ga0453684_0008499 3300044712 Bacteria 18358
181 Ga0453684_0073004 3300044712 Bacteria 4328
182 Ga0453684_0207475 3300044712 Bacteria 2279
183 Ga0453684_0252008 3300044712 Unclassified 2027
184 Ga0453684_0266837 3300044712 Bacteria 1958
185 Ga0453684_0365846 3300044712 Bacteria 1623
186 Ga0451576_0000076 3300045051 Bacteria 245246
187 Ga0451576_0001806 3300045051 Bacteria 34920
188 Ga0451576_0005721 3300045051 Bacteria 15487
189 Ga0451576_0030761 3300045051 Bacteria 5731
190 Ga0451576_0129341 3300045051 Bacteria 2632
191 Ga0466967_0003537 3300045976 Bacteria 10228
192 Ga0501032_0000292 3300049569 Bacteria 42003
193 Ga0501033_0000671 3300049570 Bacteria 31564
194 Ga0501036_0016939 3300049572 Bacteria 6088
195 Ga0501036_0087564 3300049572 Bacteria 2632
196 Ga0501037_0056603 3300049573 Bacteria 2863
197 Ga0501038_0009252 3300049574 Bacteria 9039
198 Ga0501038_0120300 3300049574 Bacteria 2166
199 Ga0501039_0021278 3300049575 Bacteria 4977
200 Ga0501046_0001682 3300049580 Bacteria 21153
201 Ga0501046_0019553 3300049580 Bacteria 5616
202 Ga0501046_0027988 3300049580 Bacteria 4593
203 Ga0501047_0011440 3300049581 Bacteria 8399
204 Ga0501047_0013226 3300049581 Bacteria 7816
205 Ga0501047_0034723 3300049581 Bacteria 4868
206 Ga0501047_0056624 3300049581 Bacteria 3791
207 Ga0501048_0059676 3300049582 Bacteria 2703
208 Ga0501070_0017277 3300049586 Bacteria 6058
209 Ga0501243_000057 3300049675 Bacteria 10912
210 Ga0501080_0101197 3300049742 Bacteria 2673
211 Ga0501083_0019806 3300049744 Bacteria 4683
212 Ga0501083_0027142 3300049744 Bacteria 3952
213 Ga0501035_0000168 3300049822 Bacteria 80065
214 Ga0501035_0008712 3300049822 Bacteria 9445
215 Ga0501035_0084733 3300049822 Bacteria 2795
216 Ga0501035_0262319 3300049822 Bacteria 1464
217 Ga0501044_0000025 3300049823 Bacteria 187867
218 Ga0501044_0014222 3300049823 Bacteria 8594
219 Ga0501044_0018618 3300049823 Bacteria 7439
220 Ga0501045_0055728 3300049824 Bacteria 2891
221 nmdc:mga0qj67_29974_c1 3300050509 Bacteria 4230
222 nmdc:mga08x19_35412_c1 3300050514 Bacteria 3158
223 Ga0500644_0000022 3300053088 Bacteria 99419
224 Ga0500651_0002706 3300053093 Bacteria 9448
225 Ga0500641_0002002 3300053096 Bacteria 7227
226 Ga0500650_0000070 3300053098 Bacteria 30965
227 Ga0500577_0000003 3300053142 Bacteria 180444
228 Ga0500622_0026787 3300053156 Bacteria 3040
229 2788436076 2786546940 Bacteria 6396474
230 Ga0207703_10403684
231 rootL2_10025387
232 Ga0070658_10001479
233 Ga0070658_10094795
234 Ga0070676_10000001
235 Ga0070683_100015992
236 Ga0068869_100000064
237 Ga0068868_100106351
238 Ga0070714_100365622
239 Ga0070713_100011552
240 Ga0070713_100094612
241 Ga0070708_100001312
242 Ga0070706_100008092
243 Ga0070706_100166277
244 Ga0070706_100408667
245 Ga0070707_100019382
246 Ga0070679_100001704
247 Ga0070684_100193761
248 Ga0070665_100001002
249 Ga0068855_100022179
250 Ga0068857_100016055
251 Ga0068856_100028688
252 Ga0068856_100041797
253 Ga0068864_100234505
254 Ga0068863_100502295
255 Ga0081455_10016282
256 Ga0070717_10000015
257 Ga0097621_100004656
258 Ga0068871_100002960
259 Ga0075430_100008250
260 Ga0075431_100131483
261 Ga0075431_100311934
262 Ga0068865_100003759
263 Ga0075435_100177894
264 Ga0105240_10003674
265 Ga0111539_10028935
266 Ga0105242_10029467
267 Ga0105237_10013032
268 Ga0105239_10348358
269 Ga0157369_10221750
270 Ga0157374_10110010
271 Ga0157378_10043360
272 Ga0157378_10097317
273 Ga0206350_10826969
274 Ga0213872_10008591
275 Ga0213872_10022214
276 Ga0213876_10007811
277 Ga0213871_10003880
278 Ga0213871_10008348
279 Ga0224712_10025720
280 Ga0207645_10000001
281 Ga0207705_10002779
282 Ga0207684_10001985
283 Ga0207684_10344745
284 Ga0207695_10036922
285 Ga0207652_10006008
286 Ga0207646_10010994
287 Ga0207646_10121148
288 Ga0207646_10175598
289 Ga0207700_10077464
290 Ga0207700_10273147
291 Ga0207664_10310107
292 Ga0207686_10138333
293 Ga0207704_10071617
294 Ga0207689_10000955
295 Ga0207661_10001565
296 Ga0207667_10010817
297 Ga0207667_10098831
298 Ga0207677_10087273
299 Ga0207702_10002820
300 Ga0207674_10060168
301 Ga0268266_10005760
302 Ga0265337_1000904
303 Ga0265337_1001096
304 Ga0265337_1035676
305 Ga0265326_10024638
306 Ga0265319_1000050
307 Ga0265319_1000767
308 Ga0265319_1001832
309 Ga0265319_1004329
310 Ga0265319_1005943
311 Ga0265319_1046950
312 Ga0265334_10002591
313 Ga0265334_10087382
314 Ga0265318_10000002
315 Ga0265318_10000524
316 Ga0265318_10002176
317 Ga0265318_10002624
318 Ga0265318_10007086
319 Ga0265323_10001893
320 Ga0265323_10022078
321 Ga0265322_10000126
322 Ga0265322_10008787
323 Ga0265322_10013712
324 Ga0265322_10042508
325 Ga0265336_10001623
326 Ga0265338_10000339
327 Ga0265338_10011695
328 Ga0265338_10027559
329 Ga0265338_10170655
330 Ga0265324_10001190
331 Ga0265324_10002597
332 Ga0265330_10038559
333 Ga0265332_10089694
334 Ga0265320_10000278
335 Ga0265320_10001566
336 Ga0265320_10002730
337 Ga0265320_10005332
338 Ga0265320_10005483
339 Ga0265320_10007561
340 Ga0265320_10009259
341 Ga0265320_10018503
342 Ga0265325_10002576
343 Ga0265325_10037712
344 Ga0265340_10048897
345 Ga0265331_10006842
346 Ga0265327_10000325
347 Ga0265327_10003471
348 Ga0265327_10042201
349 Ga0265327_10097256
350 Ga0265316_10005264
351 Ga0265316_10007202
352 Ga0265316_10007367
353 Ga0265316_10050285
354 Ga0307408_100000003
355 Ga0265313_10000016
356 Ga0265313_10001453
357 Ga0265313_10001771
358 Ga0265313_10001992
359 Ga0265313_10003814
360 Ga0265313_10006230
361 Ga0265313_10032118
362 Ga0307508_10000006
363 Ga0265314_10000662
364 Ga0265314_10003649
365 Ga0265314_10003785
366 Ga0265314_10004180
367 Ga0265314_10030628
368 Ga0265342_10007946
369 Ga0265342_10015457
370 Ga0265342_10038121
371 Ga0265342_10061677
372 Ga0265342_10143119
373 Ga0307410_10000002
374 Ga0307410_10001209
375 Ga0307407_10223079
376 Ga0307412_10085584
377 Ga0307409_100000226
378 Ga0307409_100000246
379 Ga0307416_100000012
380 Ga0307411_10008386
381 Ga0373951_0004396
382 Ga0373945_0014405
383 Ga0373943_0000565
384 Ga0373946_0011787
385 Ga0373935_0001740
386 Ga0373927_0000196
387 Ga0373933_0028738
388 Ga0395905_0000096
389 Ga0436364_0747413
390 Ga0436364_0924198
391 Ga0400489_81319
392 Ga0436365_1607764
393 Ga0436360_0653558
394 Ga0436360_0915325
395 Ga0436361_0088062
396 Ga0436361_0361144
397 Ga0436361_0508340
398 Ga0436363_1521891
399 Ga0436362_0398462
400 Ga0451795_0858225
401 Ga0439431_0037643
402 Ga0451577_0029082
403 Ga0451577_0036113
404 Ga0451577_0074830
405 Ga0451577_0118232
406 Ga0453683_0006957
407 Ga0453684_0000001
408 Ga0453684_0004738
409 Ga0453684_0008499
410 Ga0453684_0073004
411 Ga0453684_0207475
412 Ga0453684_0252008
413 Ga0453684_0266837
414 Ga0453684_0365846
415 Ga0451576_0000076
416 Ga0451576_0001806
417 Ga0451576_0005721
418 Ga0451576_0030761
419 Ga0451576_0129341
420 Ga0466967_0003537
421 Ga0501032_0000292
422 Ga0501033_0000671
423 Ga0501036_0016939
424 Ga0501036_0087564
425 Ga0501037_0056603
426 Ga0501038_0009252
427 Ga0501038_0120300
428 Ga0501039_0021278
429 Ga0501046_0001682
430 Ga0501046_0019553
431 Ga0501046_0027988
432 Ga0501047_0011440
433 Ga0501047_0013226
434 Ga0501047_0034723
435 Ga0501047_0056624
436 Ga0501048_0059676
437 Ga0501070_0017277
438 Ga0501243_000057
439 Ga0501080_0101197
440 Ga0501083_0019806
441 Ga0501083_0027142
442 Ga0501035_0000168
443 Ga0501035_0008712
444 Ga0501035_0084733
445 Ga0501035_0262319
446 Ga0501044_0000025
447 Ga0501044_0014222
448 Ga0501044_0018618
449 Ga0501045_0055728
450 nmdc:mga0qj67_29974_c1
451 nmdc:mga08x19_35412_c1
452 Ga0500644_0000022
453 Ga0500651_0002706
454 Ga0500641_0002002
455 Ga0500650_0000070
456 Ga0500577_0000003
457 Ga0500622_0026787
458 2788436076

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03462

PCRF

PCRF domain

46

230

0.96

PF00472

RF-1

RF-1 domain

238

348

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5u4j-assembly1.cif.gz_v structural basis of co-translational quality control by arfa and rf2 bound to ribosome 0.9778 91 189
6boh-assembly2.cif.gz_OC antibiotic blasticidin s and e. coli release factor 1 (containing deletion 302-304) bound to the 70s ribosome 0.9154 83 189
6boh-assembly2.cif.gz_OC antibiotic blasticidin s and e. coli release factor 1 (containing deletion 302-304) bound to the 70s ribosome 0.8846 83 189
6b4v-assembly1.cif.gz_JA antibiotic blasticidin s and e. coli release factor 1 bound to the 70s ribosome 0.8589 83 326
6bok-assembly2.cif.gz_HD e. coli release factor 1 (containing deletion 302-304) bound to the 70s ribosome 0.8496 83 326
ID Description Score Start End Superfamily
af_A0A1D6IEG8_11_112_3.30.70.1660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9895 88 189 3.30.70.1660
1gqeA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9867 89 327 3.30.70.1660
af_A0A1D6IEG8_11_112_3.30.70.1660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.98 88 189 3.30.70.1660
af_P30775_152_262_3.30.70.1660 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9692 89 192 3.30.70.1660
1gqeA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9664 89 327 3.30.70.1660
ID Description Score Start End GO Terms
AF-A0A353RCV6-F1-model_v4 Peptide chain release factor 2 0.9953 79 177 GO:0006415
AF-X1A613-F1-model_v4 Peptide chain release factor domain-containing protein 0.9942 81 182 GO:0006415
AF-A0A353RCV6-F1-model_v4 Peptide chain release factor 2 0.9661 79 177 GO:0006415
AF-W8S421-F1-model_v4 Peptide chain release factor 2 0.9645 59 197 GO:0006415
AF-X1A613-F1-model_v4 Peptide chain release factor domain-containing protein 0.9569 81 182 GO:0006415

Map