F342131

General Info

Members Datasets Scaffolds Average Seq Length
229 124 458 223

Family's Representative Sequence

Representative Sequence 3300029957|Ga0265324_10092316|Ga0265324_100923162
Length 243
Sequence MATTPLRRKNPSACMTTKLPTDTLARSIVAALTPLADPARATPMRAYVREQFDYLGIATPVRRKATSALLRTRRDPDDIIKTAKALWTLHEREFQYSAIDLLARQWKVLELRHVDDLLALAQLRSWWDTVDGLAGVVGDVVRTASATDSQAQHTMDLALHHDNLWVRRIAMLHQLGWCDATDTKRLFRYARELAPEPDFFIRKAIGWALRDYAWHAPDTVRSFLDRYGKELSPLSVREAAKHL

Samples

Sample ID Description Type Environment
1 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
13 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
14 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
15 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
16 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
17 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
18 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
20 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
21 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
22 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
23 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
24 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
25 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
28 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
29 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
30 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
31 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
32 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
33 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
34 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
35 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
36 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
37 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
38 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
39 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
40 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
41 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
42 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
43 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
44 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
45 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
46 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
47 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
48 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
49 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
50 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
51 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
52 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
53 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
54 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
55 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
56 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
57 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
58 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
59 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
60 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
61 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
62 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
63 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
64 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
65 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
66 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
67 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
68 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
69 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
70 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
71 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
72 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
73 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
74 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
75 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
76 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
77 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
78 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
79 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
80 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
81 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
82 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
83 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
88 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
89 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
90 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
91 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
92 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
93 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
94 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
95 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
96 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
99 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
103 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
104 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
105 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
108 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
109 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
110 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
111 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
112 2643221645 Massilia sp. Root351 Isolate Unclassified
113 2738541280 Massilia sp. GV090 Isolate Unclassified
114 2738541300 Massilia sp. GV016 Isolate Unclassified
115 2738543018 Massilia sp. GV045 Isolate Unclassified
116 2738543030 Massilia sp. GV097 Isolate Unclassified
117 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
118 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
119 2821131069 Duganella sp. 1224 Isolate Unclassified
120 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
121 2842711865 Duganella sp. R-73148 Isolate Unclassified
122 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
123 2857558681 Duganella sp. R-74565 Isolate Unclassified
124 2904424332 Duganella sp. 1411 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.89
Metatranscriptomes 0
Isolates 6.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.61
Nodule 0.44
Rhizoplane 0.87
Rhizosphere 79.91
Stem 0
Stem Tuber 0
Unclassified 0.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265324_10092316 3300029957 Bacteria 1030
2 JGI25154J39366_1000605 3300002738 Bacteria 17216
3 JGI25153J46596_10029044 3300003215 Bacteria 1905
4 rootH1_10107501 3300003316 Bacteria 6669
5 rootH2_10290661 3300003320 Bacteria 1374
6 rootL2_10061633 3300003322 Bacteria 3703
7 Ga0055529_1000060 3300003763 Bacteria 191230
8 Ga0055526_1000001 3300003771 Bacteria 669703
9 Ga0055526_1000040 3300003771 Bacteria 129879
10 Ga0055526_1000890 3300003771 Bacteria 22212
11 Ga0055537_1000077 3300003773 Bacteria 70424
12 Ga0055534_1000323 3300003784 Bacteria 31797
13 Ga0055528_1000013 3300003790 Bacteria 176239
14 Ga0157369_10019888 3300013105 Bacteria 7511
15 Ga0213872_10005289 3300021361 Bacteria 6666
16 Ga0213872_10011627 3300021361 Bacteria 4161
17 Ga0213872_10015971 3300021361 Bacteria 3487
18 Ga0213872_10043887 3300021361 Bacteria 2036
19 Ga0209437_111395 3300025233 Bacteria 1327
20 Ga0207425_1000174 3300025245 Bacteria 52782
21 Ga0209646_1000049 3300025246 Bacteria 301924
22 Ga0209565_1000003 3300025263 Bacteria 1099648
23 Ga0209455_1000026 3300025272 Bacteria 653778
24 Ga0209673_1000003 3300025273 Bacteria 980859
25 Ga0209675_1000003 3300025291 Bacteria 1003982
26 Ga0209025_1005438 3300025294 Bacteria 10394
27 Ga0209564_1000002 3300025295 Bacteria 1636803
28 Ga0209564_1000012 3300025295 Bacteria 792078
29 Ga0209564_1000096 3300025295 Bacteria 232165
30 Ga0209758_1000617 3300025297 Bacteria 54665
31 Ga0209256_1000029 3300025299 Bacteria 415922
32 Ga0207655_1014264 3300025728 Bacteria 4502
33 Ga0268265_10636765 3300028380 Bacteria 1023
34 Ga0307408_100002189 3300031548 Bacteria 13977
35 Ga0307408_100006399 3300031548 Bacteria 7813
36 Ga0265314_10101370 3300031711 Bacteria 1850
37 Ga0307412_10016776 3300031911 Bacteria 4371
38 Ga0307411_10176227 3300032005 Bacteria 1618
39 Ga0373939_0002385 3300035114 Bacteria 4432
40 Ga0373931_0352295 3300035691 Bacteria 922
41 Ga0436361_0189697 3300039447 Bacteria 3456
42 Ga0436361_0523088 3300039447 Bacteria 4604
43 Ga0436361_0676395 3300039447 Bacteria 3418
44 Ga0436361_0997493 3300039447 Bacteria 4400
45 Ga0439449_0032447 3300042007 Bacteria 1946
46 Ga0495617_012588 3300046452 Bacteria 2884
47 Ga0495617_033369 3300046452 Bacteria 1727
48 Ga0495617_042590 3300046452 Bacteria 1517
49 Ga0495617_069309 3300046452 Bacteria 1160
50 Ga0495590_0000161 3300046457 Bacteria 40003
51 Ga0495590_0101740 3300046457 Unclassified 1021
52 Ga0495590_0109669 3300046457 Bacteria 984
53 Ga0495629_0000039 3300046459 Bacteria 115791
54 Ga0495638_0000126 3300046460 Bacteria 125113
55 Ga0495638_0003769 3300046460 Bacteria 11783
56 Ga0495638_0048423 3300046460 Bacteria 2660
57 Ga0495638_0274202 3300046460 Unclassified 919
58 Ga0495651_0048571 3300046462 Bacteria 3277
59 Ga0495653_0000316 3300046463 Bacteria 39348
60 Ga0495650_0000061 3300046471 Bacteria 283347
61 Ga0495650_0000375 3300046471 Bacteria 78087
62 Ga0495650_0000539 3300046471 Bacteria 54045
63 Ga0495650_0005885 3300046471 Bacteria 7795
64 Ga0495650_0036243 3300046471 Bacteria 2160
65 Ga0495580_0000356 3300046472 Bacteria 37325
66 Ga0495580_0002521 3300046472 Bacteria 15977
67 Ga0495580_0019641 3300046472 Bacteria 5017
68 Ga0495580_0025142 3300046472 Bacteria 4351
69 Ga0495582_0049299 3300046473 Bacteria 2318
70 Ga0495605_0000073 3300046474 Bacteria 131765
71 Ga0495605_0001835 3300046474 Bacteria 13580
72 Ga0495605_0048071 3300046474 Bacteria 2090
73 Ga0495605_0184385 3300046474 Bacteria 916
74 Ga0495584_0000168 3300046491 Bacteria 46140
75 Ga0495584_0016267 3300046491 Bacteria 3794
76 Ga0495584_0227914 3300046491 Bacteria 947
77 Ga0495585_0003598 3300046492 Bacteria 10391
78 Ga0495585_0049097 3300046492 Bacteria 2344
79 Ga0495585_0072800 3300046492 Bacteria 1871
80 Ga0495585_0181585 3300046492 Bacteria 1081
81 Ga0495607_0003242 3300046501 Bacteria 12543
82 Ga0495607_0005529 3300046501 Bacteria 9017
83 Ga0495607_0020562 3300046501 Bacteria 4170
84 Ga0495607_0038403 3300046501 Bacteria 2868
85 Ga0495583_0000048 3300046506 Bacteria 217130
86 Ga0495583_0000113 3300046506 Bacteria 136475
87 Ga0495583_0001416 3300046506 Bacteria 24450
88 Ga0495606_0000049 3300046507 Bacteria 204038
89 Ga0495606_0005045 3300046507 Bacteria 12850
90 Ga0495606_0025561 3300046507 Bacteria 4225
91 Ga0495606_0030041 3300046507 Bacteria 3803
92 Ga0495610_0002227 3300046512 Bacteria 16397
93 Ga0495610_0005675 3300046512 Bacteria 8797
94 Ga0495610_0020940 3300046512 Bacteria 3610
95 Ga0495610_0111189 3300046512 Bacteria 1213
96 Ga0495616_0003172 3300046513 Bacteria 10614
97 Ga0495616_0007170 3300046513 Bacteria 6684
98 Ga0495616_0011261 3300046513 Bacteria 5134
99 Ga0495618_0024455 3300046514 Bacteria 3741
100 Ga0495628_0010705 3300046516 Bacteria 7767
101 Ga0495628_0048050 3300046516 Bacteria 3383
102 Ga0495630_0041392 3300046517 Bacteria 3440
103 Ga0495630_0053970 3300046517 Bacteria 3010
104 Ga0495637_0013647 3300046520 Bacteria 3852
105 Ga0495643_0000090 3300046522 Bacteria 152977
106 Ga0495643_0000151 3300046522 Bacteria 112788
107 Ga0495648_0000081 3300046524 Bacteria 125267
108 Ga0495648_0001159 3300046524 Bacteria 26652
109 Ga0495648_0017289 3300046524 Bacteria 5163
110 Ga0495648_0019668 3300046524 Bacteria 4736
111 Ga0495648_0091655 3300046524 Bacteria 1699
112 Ga0495666_0007473 3300046526 Bacteria 5474
113 Ga0495652_0042686 3300046529 Bacteria 3910
114 Ga0495654_0066601 3300046530 Bacteria 1717
115 Ga0495665_0019159 3300046531 Bacteria 3678
116 Ga0495609_0000054 3300046538 Bacteria 147369
117 Ga0495609_0001323 3300046538 Bacteria 16819
118 Ga0495609_0026351 3300046538 Bacteria 2662
119 Ga0495609_0035102 3300046538 Bacteria 2271
120 Ga0495609_0041640 3300046538 Bacteria 2063
121 Ga0495597_0001383 3300046542 Bacteria 17501
122 Ga0495597_0002399 3300046542 Bacteria 11941
123 Ga0495597_0009801 3300046542 Bacteria 4714
124 Ga0495597_0016053 3300046542 Bacteria 3540
125 Ga0495622_0000399 3300046557 Bacteria 29410
126 Ga0495633_0000436 3300046558 Bacteria 43156
127 Ga0495633_0002623 3300046558 Bacteria 12572
128 Ga0495633_0020705 3300046558 Bacteria 3302
129 Ga0495633_0059012 3300046558 Bacteria 1800
130 Ga0495656_0001744 3300046615 Bacteria 7123
131 Ga0495656_0041322 3300046615 Bacteria 1926
132 Ga0495668_0000020 3300046616 Bacteria 411641
133 Ga0495668_0000077 3300046616 Bacteria 159120
134 Ga0495668_0000539 3300046616 Bacteria 47162
135 Ga0495668_0076808 3300046616 Bacteria 1834
136 Ga0495634_0177691 3300046642 Bacteria 1335
137 Ga0495611_0002852 3300046648 Bacteria 7727
138 Ga0495611_0042432 3300046648 Bacteria 2031
139 Ga0495611_0131291 3300046648 Bacteria 1168
140 Ga0495625_0000075 3300046660 Bacteria 163672
141 Ga0495625_0000423 3300046660 Bacteria 63602
142 Ga0495625_0004787 3300046660 Bacteria 12658
143 Ga0495625_0017630 3300046660 Bacteria 5587
144 Ga0495625_0018890 3300046660 Bacteria 5366
145 Ga0495625_0024731 3300046660 Bacteria 4565
146 Ga0495625_0256745 3300046660 Bacteria 1132
147 Ga0495625_0442494 3300046660 Bacteria 804
148 Ga0495659_0000012 3300046664 Bacteria 82444
149 Ga0495659_0000785 3300046664 Bacteria 11377
150 Ga0495659_0007267 3300046664 Bacteria 3511
151 Ga0495661_0023966 3300046665 Bacteria 3955
152 Ga0495661_0052975 3300046665 Bacteria 2442
153 Ga0495657_0369723 3300046675 Bacteria 847
154 Ga0495599_0153794 3300046678 Bacteria 1423
155 Ga0495646_0033559 3300046680 Bacteria 3190
156 Ga0495646_0075571 3300046680 Bacteria 1975
157 Ga0495669_0002104 3300046684 Bacteria 8160
158 Ga0495624_0004626 3300046690 Bacteria 10030
159 Ga0495624_0007303 3300046690 Bacteria 7764
160 Ga0495624_0021683 3300046690 Bacteria 4257
161 Ga0495670_0009098 3300046691 Bacteria 4883
162 Ga0495670_0038062 3300046691 Bacteria 2397
163 Ga0495670_0147501 3300046691 Bacteria 1233
164 Ga0495671_0000145 3300046692 Bacteria 62201
165 Ga0495671_0005659 3300046692 Bacteria 7288
166 Ga0495671_0010928 3300046692 Bacteria 5015
167 Ga0495671_0024618 3300046692 Bacteria 3133
168 Ga0495649_0026373 3300046694 Bacteria 3231
169 Ga0495660_0012758 3300046810 Bacteria 4875
170 Ga0495604_0019751 3300047317 Bacteria 5391
171 Ga0495636_0000580 3300047318 Bacteria 13430
172 Ga0495636_0055342 3300047318 Bacteria 1668
173 Ga0495674_0020474 3300047319 Bacteria 6122
174 Ga0495674_0021229 3300047319 Bacteria 6007
175 Ga0495672_0000754 3300047320 Bacteria 35435
176 Ga0495672_0002222 3300047320 Bacteria 18047
177 Ga0495672_0016802 3300047320 Bacteria 4911
178 Ga0495680_0004427 3300047322 Bacteria 13424
179 Ga0495683_0000369 3300047323 Bacteria 37068
180 Ga0495687_000505 3300047443 Bacteria 46998
181 Ga0495687_001160 3300047443 Bacteria 25454
182 Ga0495687_044470 3300047443 Bacteria 1930
183 Ga0495675_0132515 3300047444 Bacteria 1548
184 Ga0495677_0011047 3300047445 Bacteria 3308
185 Ga0495677_0041396 3300047445 Bacteria 1685
186 Ga0495679_000012 3300047446 Bacteria 319098
187 Ga0495679_063957 3300047446 Bacteria 1073
188 Ga0495685_000095 3300047447 Bacteria 32053
189 Ga0495673_0000003 3300047469 Bacteria 1491337
190 Ga0495673_0000015 3300047469 Bacteria 598766
191 Ga0495673_0003928 3300047469 Bacteria 9535
192 Ga0495681_0135352 3300047470 Bacteria 1045
193 Ga0495686_0005045 3300047472 Bacteria 10589
194 Ga0495593_0005455 3300047673 Bacteria 7514
195 Ga0495602_0173801 3300048088 Bacteria 1669
196 Ga0495614_0006702 3300048089 Bacteria 5156
197 Ga0495614_0090565 3300048089 Bacteria 1330
198 Ga0495626_0046438 3300048091 Bacteria 2023
199 Ga0496102_0292901 3300048905 Bacteria 1534
200 Ga0496103_0002265 3300048906 Bacteria 12169
201 Ga0496118_0022655 3300048921 Bacteria 5481
202 Ga0496121_0004906 3300048924 Bacteria 17558
203 Ga0496123_0014661 3300048926 Bacteria 6478
204 Ga0496125_0249572 3300048928 Bacteria 1121
205 Ga0496126_0023312 3300048929 Bacteria 5998
206 Ga0496126_0222528 3300048929 Bacteria 1585
207 Ga0495678_000055 3300049459 Bacteria 153473
208 Ga0495678_001604 3300049459 Bacteria 17322
209 Ga0495678_008352 3300049459 Bacteria 5233
210 Ga0495678_020664 3300049459 Bacteria 2910
211 Ga0495678_034108 3300049459 Bacteria 2096
212 Ga0495682_0001328 3300049460 Bacteria 13714
213 Ga0495682_0061815 3300049460 Bacteria 1351
214 Ga0500594_0000557 3300053118 Bacteria 8047
215 Ga0500618_046850 3300053125 Bacteria 984
216 2547375042 2547132103 Bacteria 5115736
217 2644253028 2643221645 Bacteria 7207331
218 2738737946 2738541280 Bacteria 6630198
219 2738842156 2738541300 Bacteria 6675882
220 2739273014 2738543018 Bacteria 6718814
221 2739342058 2738543030 Bacteria 6719714
222 2746090853 2744054900 Bacteria 8399525
223 2746093612 2744054901 Bacteria 8397047
224 2821132485 2821131069 Bacteria 6108407
225 2842455560 2842454564 Bacteria 8730687
226 2842713562 2842711865 Bacteria 7155354
227 2843691002 2843690924 Bacteria 5169057
228 2857563775 2857558681 Bacteria 6617694
229 2904424556 2904424332 Bacteria 7633521
230 Ga0265324_10092316
231 JGI25154J39366_1000605
232 JGI25153J46596_10029044
233 rootH1_10107501
234 rootH2_10290661
235 rootL2_10061633
236 Ga0055529_1000060
237 Ga0055526_1000001
238 Ga0055526_1000040
239 Ga0055526_1000890
240 Ga0055537_1000077
241 Ga0055534_1000323
242 Ga0055528_1000013
243 Ga0157369_10019888
244 Ga0213872_10005289
245 Ga0213872_10011627
246 Ga0213872_10015971
247 Ga0213872_10043887
248 Ga0209437_111395
249 Ga0207425_1000174
250 Ga0209646_1000049
251 Ga0209565_1000003
252 Ga0209455_1000026
253 Ga0209673_1000003
254 Ga0209675_1000003
255 Ga0209025_1005438
256 Ga0209564_1000002
257 Ga0209564_1000012
258 Ga0209564_1000096
259 Ga0209758_1000617
260 Ga0209256_1000029
261 Ga0207655_1014264
262 Ga0268265_10636765
263 Ga0307408_100002189
264 Ga0307408_100006399
265 Ga0265314_10101370
266 Ga0307412_10016776
267 Ga0307411_10176227
268 Ga0373939_0002385
269 Ga0373931_0352295
270 Ga0436361_0189697
271 Ga0436361_0523088
272 Ga0436361_0676395
273 Ga0436361_0997493
274 Ga0439449_0032447
275 Ga0495617_012588
276 Ga0495617_033369
277 Ga0495617_042590
278 Ga0495617_069309
279 Ga0495590_0000161
280 Ga0495590_0101740
281 Ga0495590_0109669
282 Ga0495629_0000039
283 Ga0495638_0000126
284 Ga0495638_0003769
285 Ga0495638_0048423
286 Ga0495638_0274202
287 Ga0495651_0048571
288 Ga0495653_0000316
289 Ga0495650_0000061
290 Ga0495650_0000375
291 Ga0495650_0000539
292 Ga0495650_0005885
293 Ga0495650_0036243
294 Ga0495580_0000356
295 Ga0495580_0002521
296 Ga0495580_0019641
297 Ga0495580_0025142
298 Ga0495582_0049299
299 Ga0495605_0000073
300 Ga0495605_0001835
301 Ga0495605_0048071
302 Ga0495605_0184385
303 Ga0495584_0000168
304 Ga0495584_0016267
305 Ga0495584_0227914
306 Ga0495585_0003598
307 Ga0495585_0049097
308 Ga0495585_0072800
309 Ga0495585_0181585
310 Ga0495607_0003242
311 Ga0495607_0005529
312 Ga0495607_0020562
313 Ga0495607_0038403
314 Ga0495583_0000048
315 Ga0495583_0000113
316 Ga0495583_0001416
317 Ga0495606_0000049
318 Ga0495606_0005045
319 Ga0495606_0025561
320 Ga0495606_0030041
321 Ga0495610_0002227
322 Ga0495610_0005675
323 Ga0495610_0020940
324 Ga0495610_0111189
325 Ga0495616_0003172
326 Ga0495616_0007170
327 Ga0495616_0011261
328 Ga0495618_0024455
329 Ga0495628_0010705
330 Ga0495628_0048050
331 Ga0495630_0041392
332 Ga0495630_0053970
333 Ga0495637_0013647
334 Ga0495643_0000090
335 Ga0495643_0000151
336 Ga0495648_0000081
337 Ga0495648_0001159
338 Ga0495648_0017289
339 Ga0495648_0019668
340 Ga0495648_0091655
341 Ga0495666_0007473
342 Ga0495652_0042686
343 Ga0495654_0066601
344 Ga0495665_0019159
345 Ga0495609_0000054
346 Ga0495609_0001323
347 Ga0495609_0026351
348 Ga0495609_0035102
349 Ga0495609_0041640
350 Ga0495597_0001383
351 Ga0495597_0002399
352 Ga0495597_0009801
353 Ga0495597_0016053
354 Ga0495622_0000399
355 Ga0495633_0000436
356 Ga0495633_0002623
357 Ga0495633_0020705
358 Ga0495633_0059012
359 Ga0495656_0001744
360 Ga0495656_0041322
361 Ga0495668_0000020
362 Ga0495668_0000077
363 Ga0495668_0000539
364 Ga0495668_0076808
365 Ga0495634_0177691
366 Ga0495611_0002852
367 Ga0495611_0042432
368 Ga0495611_0131291
369 Ga0495625_0000075
370 Ga0495625_0000423
371 Ga0495625_0004787
372 Ga0495625_0017630
373 Ga0495625_0018890
374 Ga0495625_0024731
375 Ga0495625_0256745
376 Ga0495625_0442494
377 Ga0495659_0000012
378 Ga0495659_0000785
379 Ga0495659_0007267
380 Ga0495661_0023966
381 Ga0495661_0052975
382 Ga0495657_0369723
383 Ga0495599_0153794
384 Ga0495646_0033559
385 Ga0495646_0075571
386 Ga0495669_0002104
387 Ga0495624_0004626
388 Ga0495624_0007303
389 Ga0495624_0021683
390 Ga0495670_0009098
391 Ga0495670_0038062
392 Ga0495670_0147501
393 Ga0495671_0000145
394 Ga0495671_0005659
395 Ga0495671_0010928
396 Ga0495671_0024618
397 Ga0495649_0026373
398 Ga0495660_0012758
399 Ga0495604_0019751
400 Ga0495636_0000580
401 Ga0495636_0055342
402 Ga0495674_0020474
403 Ga0495674_0021229
404 Ga0495672_0000754
405 Ga0495672_0002222
406 Ga0495672_0016802
407 Ga0495680_0004427
408 Ga0495683_0000369
409 Ga0495687_000505
410 Ga0495687_001160
411 Ga0495687_044470
412 Ga0495675_0132515
413 Ga0495677_0011047
414 Ga0495677_0041396
415 Ga0495679_000012
416 Ga0495679_063957
417 Ga0495685_000095
418 Ga0495673_0000003
419 Ga0495673_0000015
420 Ga0495673_0003928
421 Ga0495681_0135352
422 Ga0495686_0005045
423 Ga0495593_0005455
424 Ga0495602_0173801
425 Ga0495614_0006702
426 Ga0495614_0090565
427 Ga0495626_0046438
428 Ga0496102_0292901
429 Ga0496103_0002265
430 Ga0496118_0022655
431 Ga0496121_0004906
432 Ga0496123_0014661
433 Ga0496125_0249572
434 Ga0496126_0023312
435 Ga0496126_0222528
436 Ga0495678_000055
437 Ga0495678_001604
438 Ga0495678_008352
439 Ga0495678_020664
440 Ga0495678_034108
441 Ga0495682_0001328
442 Ga0495682_0061815
443 Ga0500594_0000557
444 Ga0500618_046850
445 2547375042
446 2644253028
447 2738737946
448 2738842156
449 2739273014
450 2739342058
451 2746090853
452 2746093612
453 2821132485
454 2842455560
455 2842713562
456 2843691002
457 2857563775
458 2904424556

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08713

DNA_alkylation

DNA alkylation repair enzyme

28

243

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b6c-assembly1.cif.gz_A predicted dna alkylation repair enzyme from enterococcus faecalis. 0.9277 36 241
5cl3-assembly1.cif.gz_A alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (100% substrate at 4 hours) 0.9029 19 238
5clc-assembly1.cif.gz_A alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (9-mer b) 0.8963 19 239
2b6c-assembly1.cif.gz_A predicted dna alkylation repair enzyme from enterococcus faecalis. 0.8941 36 241
5clc-assembly1.cif.gz_A alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (9-mer b) 0.8774 19 239
ID Description Score Start End Superfamily
2b6cA02 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;ARM repeat domains 0.934 150 241 1.25.40.290
2b6cB01 Mainly Alpha;Up-down Bundle;ARM repeat;Hypothetical protein (EF3068) 0.932 36 144 1.20.1660.10
5clcA00 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant; 0.8963 19 239 1.25.10.90
5clcA00 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant; 0.8774 19 239 1.25.10.90
2b6cB01 Mainly Alpha;Up-down Bundle;ARM repeat;Hypothetical protein (EF3068) 0.8704 36 144 1.20.1660.10
ID Description Score Start End GO Terms
AF-A0A1C4MQJ2-F1-model_v4 DNA alkylation repair enzyme 0.9972 151 238
AF-A0A1I7HC00-F1-model_v4 3-methyladenine DNA glycosylase AlkD 0.9963 49 238
AF-A0A6I2L2L1-F1-model_v4 DNA alkylation repair protein 0.9949 20 238
AF-A0A6I2L2L1-F1-model_v4 DNA alkylation repair protein 0.9903 20 238
AF-A0A1I7HC00-F1-model_v4 3-methyladenine DNA glycosylase AlkD 0.9859 49 238

Map