F342285

General Info

Members Datasets Scaffolds Average Seq Length
229 142 458 495

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0000261|Ga0466958_0000261_9603_11231
Length 542
Sequence VIHPRRPRVHRFRIALESTTTTERPSTSLDPTAPGAKGLKTDAIGYISNLVIATASVAPAYSLAATLGFIVAVTGIGTHAPAVLIVSFIPILFVSVGYRFFNLADPDAGTTFAWVTRTFGPQIGWVNGWAIFLADIIVMASLAAVASQYTFALWDGHPSNFGLIAGAVIWIALMTWICYRGIELSARIQTFLLSLEIFTLLLFVVVALIKVYANNPAHSIHVSASWFNPFDLGWGALIDGVLLGIFIYWGWDSGVAVNEESRDRHRGPGKAAVISTFLLLVIYVAVSAAAQAYHGPAFLSNNSSDVLNALGQGVFGSGLDKLLIICVLTSASASTQTTILPTARTTLSMAKWGAIPSAFGRVHPRFYTPSFSTLLMGGLSILWTIALLAFNPNQDVLGDTISALGFSVCFYYGFTGLACAIYFRRDLFKSARNFIFAGLIPLVGGVMMAYVAIKAYGYYNTSGNNYSKPFLGIEVPIFVGIGGLVLGIILMLASWPFYRGFFSRRAFEAANPAVLEADATYQPAPLVPDEPPEPNPDRHHFP

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
11 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
50 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
51 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
69 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
70 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
77 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
89 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
90 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
122 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
133 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
137 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
142 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.13
Metatranscriptomes 0
Isolates 0.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 9.17
Rhizosphere 82.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0000261 3300045836 Bacteria 20448
2 Ga0070659_100000132 3300005366 Bacteria 56931
3 Ga0070709_10015922 3300005434 Bacteria 4283
4 Ga0070709_10044685 3300005434 Bacteria 2744
5 Ga0070714_100000347 3300005435 Bacteria 34714
6 Ga0070714_100005669 3300005435 Bacteria 9554
7 Ga0070714_100041514 3300005435 Bacteria 3882
8 Ga0070713_100040050 3300005436 Bacteria 3807
9 Ga0070713_100048455 3300005436 Bacteria 3498
10 Ga0070710_10000015 3300005437 Bacteria 103891
11 Ga0070711_100079508 3300005439 Bacteria 2332
12 Ga0070711_100084818 3300005439 Bacteria 2267
13 Ga0070678_100009257 3300005456 Bacteria 5955
14 Ga0070707_100001518 3300005468 Bacteria 22613
15 Ga0068861_100033935 3300005719 Bacteria 3769
16 Ga0068851_10004751 3300005834 Bacteria 6152
17 Ga0068863_100013752 3300005841 Bacteria 7800
18 Ga0081455_10010091 3300005937 Bacteria 9630
19 Ga0081455_10023085 3300005937 Bacteria 5795
20 Ga0081455_10025163 3300005937 Bacteria 5498
21 Ga0081538_10000703 3300005981 Bacteria 36689
22 Ga0081540_1011811 3300005983 Bacteria 5805
23 Ga0070717_10000059 3300006028 Bacteria 92958
24 Ga0070717_10008723 3300006028 Bacteria 7584
25 Ga0070717_10055243 3300006028 Bacteria 3275
26 Ga0070717_10070984 3300006028 Bacteria 2904
27 Ga0070717_10109841 3300006028 Bacteria 2351
28 Ga0075432_10005136 3300006058 Bacteria 4459
29 Ga0070712_100000050 3300006175 Bacteria 63870
30 Ga0070712_100005819 3300006175 Bacteria 7628
31 Ga0070712_100015097 3300006175 Bacteria 4966
32 Ga0075428_100142866 3300006844 Bacteria 2602
33 Ga0075430_100009131 3300006846 Bacteria 8374
34 Ga0075433_10000093 3300006852 Bacteria 42077
35 Ga0075433_10012270 3300006852 Bacteria 6910
36 Ga0075433_10152319 3300006852 Bacteria 2057
37 Ga0075434_100054182 3300006871 Bacteria 3985
38 Ga0075435_100015261 3300007076 Bacteria 5771
39 Ga0111539_10009319 3300009094 Bacteria 12399
40 Ga0111539_10014791 3300009094 Bacteria 9733
41 Ga0105245_10003768 3300009098 Bacteria 13496
42 Ga0105247_10000208 3300009101 Bacteria 56889
43 Ga0114129_10067534 3300009147 Bacteria 4986
44 Ga0114129_10300444 3300009147 Bacteria 2140
45 Ga0157370_10045623 3300013104 Bacteria 4203
46 Ga0157372_10228495 3300013307 Bacteria 2157
47 Ga0157375_10015305 3300013308 Bacteria 6864
48 Ga0157380_10058424 3300014326 Bacteria 3075
49 Ga0157376_10062204 3300014969 Bacteria 3141
50 Ga0213876_10002102 3300021384 Bacteria 11784
51 Ga0213876_10014085 3300021384 Bacteria 4241
52 Ga0213876_10015053 3300021384 Bacteria 4099
53 Ga0213876_10018463 3300021384 Bacteria 3683
54 Ga0213875_10006047 3300021388 Bacteria 6410
55 Ga0207656_10000342 3300025321 Bacteria 15838
56 Ga0207692_10000013 3300025898 Bacteria 103819
57 Ga0207642_10007087 3300025899 Bacteria 3765
58 Ga0207710_10002781 3300025900 Bacteria 7995
59 Ga0207688_10032856 3300025901 Bacteria 2868
60 Ga0207699_10016584 3300025906 Bacteria 3857
61 Ga0207693_10000151 3300025915 Bacteria 64033
62 Ga0207693_10001111 3300025915 Bacteria 24207
63 Ga0207693_10003276 3300025915 Bacteria 13865
64 Ga0207687_10143347 3300025927 Bacteria 1815
65 Ga0207700_10026550 3300025928 Bacteria 4039
66 Ga0207700_10052949 3300025928 Bacteria 3038
67 Ga0207664_10000310 3300025929 Bacteria 36142
68 Ga0207664_10016874 3300025929 Bacteria 5338
69 Ga0207664_10035323 3300025929 Bacteria 3856
70 Ga0207664_10064242 3300025929 Bacteria 2935
71 Ga0207664_10080395 3300025929 Bacteria 2649
72 Ga0207690_10008633 3300025932 Bacteria 6042
73 Ga0207706_10010938 3300025933 Bacteria 8277
74 Ga0207709_10003949 3300025935 Bacteria 8654
75 Ga0207683_10013180 3300026121 Bacteria 7053
76 Ga0207428_10008154 3300027907 Bacteria 9488
77 Ga0265337_1000715 3300028556 Bacteria 17470
78 Ga0265326_10000023 3300028558 Bacteria 113142
79 Ga0265326_10000131 3300028558 Bacteria 38598
80 Ga0265319_1000146 3300028563 Bacteria 52336
81 Ga0265319_1003540 3300028563 Bacteria 8105
82 Ga0265334_10000135 3300028573 Bacteria 46602
83 Ga0265318_10000355 3300028577 Bacteria 36365
84 Ga0265336_10000001 3300028666 Bacteria 916179
85 Ga0265338_10000004 3300028800 Bacteria 644793
86 Ga0265338_10000902 3300028800 Bacteria 49948
87 Ga0265338_10200230 3300028800 Bacteria 1506
88 Ga0265324_10001427 3300029957 Bacteria 13711
89 Ga0265324_10004005 3300029957 Bacteria 6787
90 Ga0265340_10000002 3300031247 Bacteria 711693
91 Ga0265327_10004249 3300031251 Bacteria 12845
92 Ga0265327_10027784 3300031251 Bacteria 3250
93 Ga0307408_100013782 3300031548 Bacteria 5367
94 Ga0307413_10007653 3300031824 Bacteria 5039
95 Ga0307410_10010463 3300031852 Bacteria 5255
96 Ga0307410_10167949 3300031852 Bacteria 1650
97 Ga0307416_100013537 3300032002 Bacteria 5550
98 Ga0307416_100194127 3300032002 Bacteria 1918
99 Ga0307415_100001010 3300032126 Bacteria 13011
100 Ga0373937_0016005 3300036401 Bacteria 6651
101 Ga0436364_0161423 3300037853 Bacteria 6010
102 Ga0436364_0269009 3300037853 Bacteria 1474
103 Ga0436364_0323602 3300037853 Bacteria 8849
104 Ga0436364_1288519 3300037853 Bacteria 9291
105 Ga0436365_0262453 3300039437 Bacteria 28030
106 Ga0436365_0302327 3300039437 Bacteria 5312
107 Ga0436365_1174289 3300039437 Bacteria 19637
108 Ga0436365_1460843 3300039437 Bacteria 20409
109 Ga0436365_1579099 3300039437 Bacteria 3984
110 Ga0436365_1804427 3300039437 Bacteria 3310
111 Ga0436363_0742356 3300039450 Bacteria 5756
112 Ga0436363_1052438 3300039450 Bacteria 5430
113 Ga0436362_0284440 3300039453 Bacteria 3378
114 Ga0436362_0953178 3300039453 Bacteria 2630
115 Ga0466969_0011415 3300044656 Bacteria 4703
116 Ga0466966_0046019 3300044684 Bacteria 2788
117 Ga0466961_0001786 3300044693 Bacteria 13319
118 Ga0466961_0012276 3300044693 Bacteria 5477
119 Ga0466963_0020755 3300044694 Bacteria 4134
120 Ga0466963_0024481 3300044694 Bacteria 3844
121 Ga0466959_0009041 3300045049 Bacteria 7069
122 Ga0466959_0011013 3300045049 Bacteria 6489
123 Ga0466959_0058274 3300045049 Bacteria 2813
124 Ga0466959_0081522 3300045049 Bacteria 2331
125 Ga0466958_0001418 3300045836 Bacteria 11353
126 Ga0466958_0030724 3300045836 Bacteria 3192
127 Ga0466958_0032546 3300045836 Bacteria 3102
128 Ga0466967_0002486 3300045976 Bacteria 11505
129 Ga0466967_0023917 3300045976 Bacteria 5015
130 Ga0495651_0001413 3300046462 Bacteria 18648
131 Ga0495653_0058859 3300046463 Bacteria 2919
132 Ga0495608_0068985 3300046511 Bacteria 2311
133 Ga0495618_0000046 3300046514 Bacteria 93942
134 Ga0495630_0000783 3300046517 Bacteria 22332
135 Ga0495652_0000086 3300046529 Bacteria 99373
136 Ga0495652_0104181 3300046529 Bacteria 2295
137 Ga0495640_0019953 3300046533 Bacteria 4943
138 Ga0495645_0000152 3300046543 Bacteria 47567
139 Ga0495622_0000521 3300046557 Bacteria 23348
140 Ga0495667_0003437 3300046559 Bacteria 10622
141 Ga0495667_0059167 3300046559 Bacteria 2515
142 Ga0495634_0089995 3300046642 Bacteria 1994
143 Ga0495635_0027386 3300046663 Bacteria 3965
144 Ga0495657_0000011 3300046675 Bacteria 207360
145 Ga0495657_0006422 3300046675 Bacteria 9202
146 Ga0495657_0015321 3300046675 Bacteria 5614
147 Ga0495599_0012082 3300046678 Bacteria 5314
148 Ga0495646_0021908 3300046680 Bacteria 4035
149 Ga0495604_0003422 3300047317 Bacteria 12654
150 Ga0495674_0000007 3300047319 Bacteria 336257
151 Ga0495680_0003728 3300047322 Bacteria 14844
152 Ga0495684_0010368 3300047471 Bacteria 7209
153 Ga0496100_0001823 3300048903 Bacteria 10649
154 Ga0496101_0017497 3300048904 Bacteria 4862
155 Ga0496101_0028501 3300048904 Bacteria 3898
156 Ga0496104_0000006 3300048907 Bacteria 536446
157 Ga0496104_0016952 3300048907 Bacteria 6626
158 Ga0496104_0027785 3300048907 Bacteria 5237
159 Ga0496105_0130403 3300048908 Bacteria 2073
160 Ga0496106_0004743 3300048909 Bacteria 10054
161 Ga0496107_0004598 3300048910 Bacteria 9356
162 Ga0496109_0084835 3300048912 Bacteria 2922
163 Ga0496110_0000064 3300048913 Bacteria 52955
164 Ga0496110_0000476 3300048913 Bacteria 27211
165 Ga0496110_0050302 3300048913 Bacteria 3658
166 Ga0496111_0000012 3300048914 Bacteria 83376
167 Ga0496111_0003449 3300048914 Bacteria 9775
168 Ga0496112_0008981 3300048915 Bacteria 8974
169 Ga0496114_0000043 3300048917 Bacteria 131720
170 Ga0496114_0119573 3300048917 Bacteria 2265
171 Ga0496115_0000004 3300048918 Bacteria 319734
172 Ga0496115_0000211 3300048918 Bacteria 54033
173 Ga0496115_0053657 3300048918 Bacteria 3235
174 Ga0501031_0024303 3300049568 Bacteria 3949
175 Ga0501031_0035327 3300049568 Bacteria 3260
176 Ga0501036_0007088 3300049572 Bacteria 9118
177 Ga0501037_0060720 3300049573 Bacteria 2757
178 Ga0501038_0024983 3300049574 Bacteria 5327
179 Ga0501038_0053810 3300049574 Bacteria 3464
180 Ga0501039_0002766 3300049575 Bacteria 13085
181 Ga0501042_0005400 3300049578 Bacteria 8225
182 Ga0501043_0016714 3300049579 Bacteria 5750
183 Ga0501046_0031667 3300049580 Bacteria 4285
184 Ga0501048_0004921 3300049582 Bacteria 10191
185 Ga0501068_0015290 3300049584 Bacteria 4405
186 Ga0501068_0019552 3300049584 Bacteria 3936
187 Ga0501071_0011808 3300049587 Bacteria 5894
188 Ga0501071_0057852 3300049587 Bacteria 2802
189 Ga0501072_0003450 3300049588 Bacteria 11907
190 Ga0501072_0005673 3300049588 Bacteria 9504
191 Ga0501075_0021906 3300049591 Bacteria 4663
192 Ga0501076_0005040 3300049592 Bacteria 9452
193 Ga0501077_0011096 3300049593 Bacteria 5621
194 Ga0501077_0044569 3300049593 Bacteria 2817
195 Ga0501079_0016792 3300049741 Bacteria 5589
196 Ga0501079_0054000 3300049741 Bacteria 3099
197 Ga0501081_0010307 3300049743 Bacteria 6101
198 Ga0501081_0016917 3300049743 Bacteria 4820
199 Ga0501035_0015666 3300049822 Bacteria 6997
200 Ga0501045_0004139 3300049824 Bacteria 10020
201 Ga0501045_0005936 3300049824 Bacteria 8446
202 nmdc:mga00v17_9265_c1 3300050491 Bacteria 5321
203 nmdc:mga0yw44_660_c1 3300050492 Bacteria 12561
204 nmdc:mga05p37_11926_c1 3300050507 Bacteria 10365
205 nmdc:mga05p37_48933_c1 3300050507 Bacteria 5198
206 nmdc:mga05p37_49438_c1 3300050507 Bacteria 5172
207 nmdc:mga0qj67_1830_c1 3300050509 Bacteria 15058
208 nmdc:mga08y16_134495_c1 3300050511 Bacteria 2570
209 nmdc:mga08y16_40150_c1 3300050511 Bacteria 4906
210 nmdc:mga0n895_4089_c1 3300050512 Bacteria 11887
211 nmdc:mga0n895_68305_c1 3300050512 Bacteria 3521
212 nmdc:mga0rr50_92668_c1 3300050513 Bacteria 2356
213 nmdc:mga08x19_29220_c1 3300050514 Bacteria 3457
214 nmdc:mga0a205_12_c2 3300050515 Bacteria 69190
215 nmdc:mga0a205_13903_c1 3300050515 Bacteria 7504
216 nmdc:mga0a205_158760_c1 3300050515 Bacteria 2159
217 nmdc:mga0a205_34112_c1 3300050515 Bacteria 4882
218 nmdc:mga0a205_4450_c1 3300050515 Bacteria 12583
219 Ga0495601_0005225 3300053077 Bacteria 7554
220 Ga0495612_0000032 3300053078 Bacteria 78122
221 Ga0495595_0002180 3300053084 Bacteria 7612
222 Ga0501084_0016336 3300054114 Bacteria 6165
223 Ga0501084_0043347 3300054114 Bacteria 3764
224 Ga0501082_0020745 3300060353 Bacteria 5666
225 Ga0501082_0025224 3300060353 Bacteria 5122
226 Ga0530510_0003302 3300061734 Bacteria 11108
227 Ga0530510_0020658 3300061734 Bacteria 4681
228 2946005914 2946003308 Bacteria 3857229
229 8054109748 8054107350 Bacteria 5022511
230 Ga0466958_0000261
231 Ga0070659_100000132
232 Ga0070709_10015922
233 Ga0070709_10044685
234 Ga0070714_100000347
235 Ga0070714_100005669
236 Ga0070714_100041514
237 Ga0070713_100040050
238 Ga0070713_100048455
239 Ga0070710_10000015
240 Ga0070711_100079508
241 Ga0070711_100084818
242 Ga0070678_100009257
243 Ga0070707_100001518
244 Ga0068861_100033935
245 Ga0068851_10004751
246 Ga0068863_100013752
247 Ga0081455_10010091
248 Ga0081455_10023085
249 Ga0081455_10025163
250 Ga0081538_10000703
251 Ga0081540_1011811
252 Ga0070717_10000059
253 Ga0070717_10008723
254 Ga0070717_10055243
255 Ga0070717_10070984
256 Ga0070717_10109841
257 Ga0075432_10005136
258 Ga0070712_100000050
259 Ga0070712_100005819
260 Ga0070712_100015097
261 Ga0075428_100142866
262 Ga0075430_100009131
263 Ga0075433_10000093
264 Ga0075433_10012270
265 Ga0075433_10152319
266 Ga0075434_100054182
267 Ga0075435_100015261
268 Ga0111539_10009319
269 Ga0111539_10014791
270 Ga0105245_10003768
271 Ga0105247_10000208
272 Ga0114129_10067534
273 Ga0114129_10300444
274 Ga0157370_10045623
275 Ga0157372_10228495
276 Ga0157375_10015305
277 Ga0157380_10058424
278 Ga0157376_10062204
279 Ga0213876_10002102
280 Ga0213876_10014085
281 Ga0213876_10015053
282 Ga0213876_10018463
283 Ga0213875_10006047
284 Ga0207656_10000342
285 Ga0207692_10000013
286 Ga0207642_10007087
287 Ga0207710_10002781
288 Ga0207688_10032856
289 Ga0207699_10016584
290 Ga0207693_10000151
291 Ga0207693_10001111
292 Ga0207693_10003276
293 Ga0207687_10143347
294 Ga0207700_10026550
295 Ga0207700_10052949
296 Ga0207664_10000310
297 Ga0207664_10016874
298 Ga0207664_10035323
299 Ga0207664_10064242
300 Ga0207664_10080395
301 Ga0207690_10008633
302 Ga0207706_10010938
303 Ga0207709_10003949
304 Ga0207683_10013180
305 Ga0207428_10008154
306 Ga0265337_1000715
307 Ga0265326_10000023
308 Ga0265326_10000131
309 Ga0265319_1000146
310 Ga0265319_1003540
311 Ga0265334_10000135
312 Ga0265318_10000355
313 Ga0265336_10000001
314 Ga0265338_10000004
315 Ga0265338_10000902
316 Ga0265338_10200230
317 Ga0265324_10001427
318 Ga0265324_10004005
319 Ga0265340_10000002
320 Ga0265327_10004249
321 Ga0265327_10027784
322 Ga0307408_100013782
323 Ga0307413_10007653
324 Ga0307410_10010463
325 Ga0307410_10167949
326 Ga0307416_100013537
327 Ga0307416_100194127
328 Ga0307415_100001010
329 Ga0373937_0016005
330 Ga0436364_0161423
331 Ga0436364_0269009
332 Ga0436364_0323602
333 Ga0436364_1288519
334 Ga0436365_0262453
335 Ga0436365_0302327
336 Ga0436365_1174289
337 Ga0436365_1460843
338 Ga0436365_1579099
339 Ga0436365_1804427
340 Ga0436363_0742356
341 Ga0436363_1052438
342 Ga0436362_0284440
343 Ga0436362_0953178
344 Ga0466969_0011415
345 Ga0466966_0046019
346 Ga0466961_0001786
347 Ga0466961_0012276
348 Ga0466963_0020755
349 Ga0466963_0024481
350 Ga0466959_0009041
351 Ga0466959_0011013
352 Ga0466959_0058274
353 Ga0466959_0081522
354 Ga0466958_0001418
355 Ga0466958_0030724
356 Ga0466958_0032546
357 Ga0466967_0002486
358 Ga0466967_0023917
359 Ga0495651_0001413
360 Ga0495653_0058859
361 Ga0495608_0068985
362 Ga0495618_0000046
363 Ga0495630_0000783
364 Ga0495652_0000086
365 Ga0495652_0104181
366 Ga0495640_0019953
367 Ga0495645_0000152
368 Ga0495622_0000521
369 Ga0495667_0003437
370 Ga0495667_0059167
371 Ga0495634_0089995
372 Ga0495635_0027386
373 Ga0495657_0000011
374 Ga0495657_0006422
375 Ga0495657_0015321
376 Ga0495599_0012082
377 Ga0495646_0021908
378 Ga0495604_0003422
379 Ga0495674_0000007
380 Ga0495680_0003728
381 Ga0495684_0010368
382 Ga0496100_0001823
383 Ga0496101_0017497
384 Ga0496101_0028501
385 Ga0496104_0000006
386 Ga0496104_0016952
387 Ga0496104_0027785
388 Ga0496105_0130403
389 Ga0496106_0004743
390 Ga0496107_0004598
391 Ga0496109_0084835
392 Ga0496110_0000064
393 Ga0496110_0000476
394 Ga0496110_0050302
395 Ga0496111_0000012
396 Ga0496111_0003449
397 Ga0496112_0008981
398 Ga0496114_0000043
399 Ga0496114_0119573
400 Ga0496115_0000004
401 Ga0496115_0000211
402 Ga0496115_0053657
403 Ga0501031_0024303
404 Ga0501031_0035327
405 Ga0501036_0007088
406 Ga0501037_0060720
407 Ga0501038_0024983
408 Ga0501038_0053810
409 Ga0501039_0002766
410 Ga0501042_0005400
411 Ga0501043_0016714
412 Ga0501046_0031667
413 Ga0501048_0004921
414 Ga0501068_0015290
415 Ga0501068_0019552
416 Ga0501071_0011808
417 Ga0501071_0057852
418 Ga0501072_0003450
419 Ga0501072_0005673
420 Ga0501075_0021906
421 Ga0501076_0005040
422 Ga0501077_0011096
423 Ga0501077_0044569
424 Ga0501079_0016792
425 Ga0501079_0054000
426 Ga0501081_0010307
427 Ga0501081_0016917
428 Ga0501035_0015666
429 Ga0501045_0004139
430 Ga0501045_0005936
431 nmdc:mga00v17_9265_c1
432 nmdc:mga0yw44_660_c1
433 nmdc:mga05p37_11926_c1
434 nmdc:mga05p37_48933_c1
435 nmdc:mga05p37_49438_c1
436 nmdc:mga0qj67_1830_c1
437 nmdc:mga08y16_134495_c1
438 nmdc:mga08y16_40150_c1
439 nmdc:mga0n895_4089_c1
440 nmdc:mga0n895_68305_c1
441 nmdc:mga0rr50_92668_c1
442 nmdc:mga08x19_29220_c1
443 nmdc:mga0a205_12_c2
444 nmdc:mga0a205_13903_c1
445 nmdc:mga0a205_158760_c1
446 nmdc:mga0a205_34112_c1
447 nmdc:mga0a205_4450_c1
448 Ga0495601_0005225
449 Ga0495612_0000032
450 Ga0495595_0002180
451 Ga0501084_0016336
452 Ga0501084_0043347
453 Ga0501082_0020745
454 Ga0501082_0025224
455 Ga0530510_0003302
456 Ga0530510_0020658
457 2946005914
458 8054109748

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

44

494

0.8

PF00324

AA_permease

Amino acid permease

49

499

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.7004 19 430
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.6744 19 436
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.6716 19 435
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.6688 19 430
3ob6-assembly1.cif.gz_B structure of adic(n101a) in the open-to-out arg+ bound conformation 0.6673 13 438
ID Description Score Start End Superfamily
af_Q09887_36_510_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7749 19 435 1.20.1740.10
af_Q5AG77_70_532_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7641 19 424 1.20.1740.10
af_Q5A3J0_41_501_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7497 19 424 1.20.1740.10
af_Q2G0J4_14_476_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7394 23 437 1.20.1740.10
af_Q9UT18_73_572_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.729 20 424 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A7K2I2F9-F1-model_v4 Amino acid permease 0.8889 26 425 GO:0016020
GO:0016791
GO:0022857
AF-F2R9J9-F1-model_v4 Amino acid transporter, APC family 0.8874 8 434 GO:0005886
GO:0022857
AF-A0A4Y6R6U0-F1-model_v4 APC family permease 0.8802 8 441 GO:0005886
GO:0022857
AF-A0A6I2KBM2-F1-model_v4 deleted 0.8794 112 433
AF-A0A7X9Q2E9-F1-model_v4 APC family permease 0.8783 31 441 GO:0005886
GO:0022857

Map