F342843

General Info

Members Datasets Scaffolds Average Seq Length
230 168 230 221

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100051445|Ga0068855_1000514453
Length 237
Sequence MDTNALKKAAAEAALAYVEDDAVVGVGTGSTVNFFIDALAARRARIAATVASSEASAKRLRDLRIPVRELNDTDGCDVYVDGADEVTEHLAMIKGGGAALTREKIVAQASRRFVCIADASKLVPVLGKFPLPVEVIPMARSFVARELVKLGGMPELRQGVTTDNGNLILDLRGLTILDPVRLETAINMIPGVVTNGLFARRPADILLLATPEGVKTYNRKLGSDSFQDPPDPKLKRI

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
56 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
114 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
115 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
116 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
117 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
118 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
119 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
120 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
121 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
122 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
123 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
124 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
125 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
126 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
132 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
133 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
134 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
135 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
146 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
147 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
148 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
149 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
150 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
151 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
152 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.57
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10026422 3300005327 Bacteria 4657
2 Ga0070658_10261511 3300005327 Bacteria 1470
3 Ga0070690_100018141 3300005330 Bacteria 4244
4 Ga0068869_100000839 3300005334 Bacteria 17582
5 Ga0070666_10146857 3300005335 Bacteria 1644
6 Ga0070680_100002595 3300005336 Bacteria 13376
7 Ga0070680_100040938 3300005336 Bacteria 3755
8 Ga0070680_100360923 3300005336 Bacteria 1236
9 Ga0070682_100003686 3300005337 Bacteria 8507
10 Ga0068868_100106341 3300005338 Bacteria 2276
11 Ga0070689_100001532 3300005340 Bacteria 14739
12 Ga0070689_100073878 3300005340 Bacteria 2668
13 Ga0070691_10003164 3300005341 Bacteria 7368
14 Ga0070687_100001410 3300005343 Bacteria 8443
15 Ga0070692_10112505 3300005345 Bacteria 1507
16 Ga0070675_100672844 3300005354 Bacteria 941
17 Ga0070688_100126635 3300005365 Bacteria 1718
18 Ga0070714_100013370 3300005435 Bacteria 6579
19 Ga0070701_10030633 3300005438 Bacteria 2663
20 Ga0070711_100243946 3300005439 Bacteria 1406
21 Ga0070711_100359892 3300005439 Bacteria 1172
22 Ga0070705_100000838 3300005440 Bacteria 17296
23 Ga0070700_100007201 3300005441 Bacteria 5992
24 Ga0070694_100001978 3300005444 Bacteria 12160
25 Ga0070694_100005049 3300005444 Bacteria 7963
26 Ga0070694_100053547 3300005444 Bacteria 2731
27 Ga0070694_100677043 3300005444 Bacteria 837
28 Ga0070681_10003269 3300005458 Bacteria 15121
29 Ga0070681_10031927 3300005458 Bacteria 5288
30 Ga0070681_10358232 3300005458 Bacteria 1369
31 Ga0068867_100001699 3300005459 Bacteria 15356
32 Ga0070707_100570526 3300005468 Bacteria 1094
33 Ga0070698_100223740 3300005471 Bacteria 1815
34 Ga0070699_100018561 3300005518 Bacteria 5974
35 Ga0070679_100017136 3300005530 Bacteria 7006
36 Ga0070697_100281890 3300005536 Bacteria 1426
37 Ga0070686_100002500 3300005544 Bacteria 10125
38 Ga0070686_100005838 3300005544 Bacteria 6822
39 Ga0070695_100015035 3300005545 Bacteria 4670
40 Ga0070695_100085651 3300005545 Bacteria 2092
41 Ga0070696_100002108 3300005546 Bacteria 13066
42 Ga0070696_100069694 3300005546 Bacteria 2471
43 Ga0070696_100103577 3300005546 Bacteria 2042
44 Ga0070696_100252414 3300005546 Bacteria 1334
45 Ga0070696_100323624 3300005546 Bacteria 1187
46 Ga0070693_100000561 3300005547 Bacteria 16436
47 Ga0070704_100000875 3300005549 Bacteria 15061
48 Ga0070704_100107421 3300005549 Bacteria 2117
49 Ga0068855_100005846 3300005563 Bacteria 15019
50 Ga0068855_100017767 3300005563 Bacteria 8550
51 Ga0068855_100051445 3300005563 Bacteria 4852
52 Ga0068855_100453107 3300005563 Bacteria 1400
53 Ga0068854_100011980 3300005578 Bacteria 5666
54 Ga0068856_100096202 3300005614 Bacteria 2950
55 Ga0068856_100160274 3300005614 Bacteria 2260
56 Ga0070702_100000176 3300005615 Bacteria 20371
57 Ga0068852_100030505 3300005616 Bacteria 4439
58 Ga0068852_100118606 3300005616 Bacteria 2418
59 Ga0068859_100013382 3300005617 Bacteria 8227
60 Ga0068866_10001952 3300005718 Bacteria 8594
61 Ga0068861_100003271 3300005719 Bacteria 10717
62 Ga0068858_100006826 3300005842 Bacteria 11104
63 Ga0068860_100003610 3300005843 Bacteria 15906
64 Ga0068862_100250323 3300005844 Bacteria 1614
65 Ga0081539_10059773 3300005985 Bacteria 2096
66 Ga0097621_100019435 3300006237 Bacteria 5213
67 Ga0068871_100002743 3300006358 Bacteria 12027
68 Ga0075428_100000130 3300006844 Bacteria 65814
69 Ga0075428_100067470 3300006844 Bacteria 3915
70 Ga0075430_100022907 3300006846 Bacteria 5312
71 Ga0075430_100481469 3300006846 Bacteria 1024
72 Ga0075431_100095936 3300006847 Bacteria 3061
73 Ga0075431_100342628 3300006847 Bacteria 1504
74 Ga0075431_100358993 3300006847 Bacteria 1464
75 Ga0075434_100000003 3300006871 Bacteria 134839
76 Ga0075434_100071133 3300006871 Bacteria 3469
77 Ga0075429_100000541 3300006880 Bacteria 28764
78 Ga0075429_100531639 3300006880 Bacteria 1030
79 Ga0068865_100391715 3300006881 Bacteria 1136
80 Ga0075436_100004543 3300006914 Bacteria 9509
81 Ga0075436_100046529 3300006914 Bacteria 2992
82 Ga0097620_100013382 3300006931 Bacteria 8227
83 Ga0075435_100029977 3300007076 Bacteria 4274
84 Ga0099794_10032590 3300007265 Bacteria 2447
85 Ga0099795_10192161 3300007788 Bacteria 857
86 Ga0105240_10002306 3300009093 Bacteria 30864
87 Ga0105240_10240829 3300009093 Bacteria 2097
88 Ga0105245_10002959 3300009098 Bacteria 15243
89 Ga0114129_10000604 3300009147 Bacteria 44388
90 Ga0114129_10923249 3300009147 Bacteria 1104
91 Ga0105243_10002380 3300009148 Bacteria 15747
92 Ga0105241_10019341 3300009174 Bacteria 5021
93 Ga0105242_10001922 3300009176 Bacteria 16329
94 Ga0105242_10255185 3300009176 Bacteria 1582
95 Ga0105242_10348886 3300009176 Bacteria 1366
96 Ga0105248_10071930 3300009177 Bacteria 3886
97 Ga0105249_10087255 3300009553 Bacteria 2911
98 Ga0105249_10207009 3300009553 Bacteria 1923
99 Ga0105239_10121723 3300010375 Bacteria 2898
100 Ga0157370_10232945 3300013104 Bacteria 1704
101 Ga0157378_10001528 3300013297 Bacteria 20923
102 Ga0163162_10209015 3300013306 Bacteria 2081
103 Ga0157380_10083790 3300014326 Bacteria 2613
104 Ga0157379_10590232 3300014968 Bacteria 1036
105 Ga0157376_10017543 3300014969 Bacteria 5464
106 Ga0207642_10000622 3300025899 Bacteria 10896
107 Ga0207688_10121096 3300025901 Bacteria 1527
108 Ga0207647_10166985 3300025904 Bacteria 1282
109 Ga0207643_10102619 3300025908 Bacteria 1678
110 Ga0207705_10009327 3300025909 Bacteria 7137
111 Ga0207684_10705716 3300025910 Bacteria 857
112 Ga0207654_10087672 3300025911 Bacteria 1889
113 Ga0207707_10007623 3300025912 Bacteria 9431
114 Ga0207707_10008108 3300025912 Bacteria 9120
115 Ga0207707_10136603 3300025912 Bacteria 2144
116 Ga0207695_10002060 3300025913 Bacteria 30720
117 Ga0207663_10461146 3300025916 Bacteria 981
118 Ga0207660_10001983 3300025917 Bacteria 13634
119 Ga0207660_10209412 3300025917 Bacteria 1526
120 Ga0207662_10000628 3300025918 Bacteria 15842
121 Ga0207662_10274494 3300025918 Bacteria 1114
122 Ga0207652_10050727 3300025921 Bacteria 3555
123 Ga0207687_10000958 3300025927 Bacteria 19629
124 Ga0207664_10011871 3300025929 Bacteria 6214
125 Ga0207686_10001947 3300025934 Bacteria 11405
126 Ga0207709_10002147 3300025935 Bacteria 12638
127 Ga0207670_10001125 3300025936 Bacteria 14076
128 Ga0207670_10015475 3300025936 Bacteria 4559
129 Ga0207704_10001381 3300025938 Bacteria 10862
130 Ga0207711_10055259 3300025941 Bacteria 3409
131 Ga0207689_10002527 3300025942 Bacteria 16996
132 Ga0207667_10002642 3300025949 Bacteria 22152
133 Ga0207667_10107150 3300025949 Bacteria 2883
134 Ga0207667_10123712 3300025949 Bacteria 2665
135 Ga0207712_10031292 3300025961 Bacteria 3583
136 Ga0207640_10006432 3300025981 Bacteria 6448
137 Ga0207677_10298252 3300026023 Bacteria 1330
138 Ga0207703_10046730 3300026035 Bacteria 3488
139 Ga0207708_10003597 3300026075 Bacteria 11421
140 Ga0207702_10072123 3300026078 Bacteria 2975
141 Ga0207702_10202620 3300026078 Bacteria 1840
142 Ga0207641_10283600 3300026088 Bacteria 1559
143 Ga0207648_10003587 3300026089 Bacteria 16229
144 Ga0207674_10200879 3300026116 Bacteria 1943
145 Ga0207675_100012063 3300026118 Bacteria 8075
146 Ga0207698_10021546 3300026142 Bacteria 4461
147 Ga0209981_1016661 3300027378 Bacteria 1034
148 Ga0207428_10009247 3300027907 Bacteria 8849
149 Ga0268265_10251890 3300028380 Bacteria 1564
150 Ga0268264_10008894 3300028381 Bacteria 8329
151 Ga0307408_101022327 3300031548 Bacteria 763
152 Ga0307405_10300894 3300031731 Bacteria 1217
153 Ga0307416_100130770 3300032002 Bacteria 2259
154 Ga0307416_100871260 3300032002 Bacteria 999
155 Ga0307510_10057023 3300033180 Bacteria 4060
156 Ga0373930_0004115 3300034816 Bacteria 2349
157 Ga0373948_0004888 3300034817 Bacteria 2144
158 Ga0373928_0015981 3300035084 Bacteria 1532
159 Ga0373934_0010860 3300035086 Bacteria 3423
160 Ga0373951_0050713 3300035091 Bacteria 1020
161 Ga0373952_0003346 3300035092 Bacteria 2892
162 Ga0373952_0030228 3300035092 Bacteria 1198
163 Ga0373952_0034502 3300035092 Bacteria 1141
164 Ga0373932_0040147 3300035112 Bacteria 1346
165 Ga0373939_0004457 3300035114 Bacteria 3315
166 Ga0373941_0000929 3300035115 Bacteria 6039
167 Ga0373953_0104288 3300035117 Bacteria 1195
168 Ga0373954_0000003 3300035118 Bacteria 137757
169 Ga0373960_0124470 3300035121 Bacteria 858
170 Ga0373955_0127431 3300035172 Bacteria 1484
171 Ga0373961_0003484 3300035241 Bacteria 3896
172 Ga0373961_0097878 3300035241 Bacteria 946
173 Ga0373931_0060844 3300035691 Bacteria 2034
174 Ga0373931_0117000 3300035691 Bacteria 1519
175 Ga0373931_0155263 3300035691 Bacteria 1337
176 Ga0373931_0194837 3300035691 Bacteria 1207
177 Ga0373933_0003154 3300035724 Bacteria 9202
178 Ga0373933_0171881 3300035724 Bacteria 1379
179 Ga0373937_0000249 3300036401 Bacteria 52712
180 Ga0395901_0039150 3300038443 Bacteria 4906
181 Ga0439439_0020712 3300041406 Bacteria 1636
182 Ga0439441_000209 3300042001 Bacteria 5461
183 Ga0439441_064342 3300042001 Bacteria 777
184 Ga0439434_0003660 3300042435 Bacteria 4494
185 Ga0439435_0006258 3300042436 Bacteria 2668
186 Ga0450893_0012908 3300042532 Bacteria 1390
187 Ga0451577_0035957 3300042876 Bacteria 4461
188 Ga0453684_0397687 3300044712 Bacteria 1544
189 Ga0451576_0000013 3300045051 Bacteria 665120
190 Ga0451576_0007356 3300045051 Bacteria 13198
191 Ga0451576_0436866 3300045051 Bacteria 1373
192 Ga0451576_0713504 3300045051 Bacteria 1053
193 Ga0451576_0881338 3300045051 Bacteria 939
194 Ga0466967_0001092 3300045976 Bacteria 15024
195 Ga0495629_0070850 3300046459 Bacteria 2433
196 Ga0495630_0410014 3300046517 Bacteria 1038
197 Ga0495666_0220351 3300046526 Bacteria 869
198 Ga0495640_0039374 3300046533 Bacteria 3317
199 Ga0495586_0064682 3300046535 Bacteria 1993
200 Ga0495598_0011213 3300046537 Bacteria 2167
201 Ga0495621_0242888 3300046539 Bacteria 734
202 Ga0495633_0269730 3300046558 Bacteria 775
203 Ga0495656_0126748 3300046615 Bacteria 1211
204 Ga0495635_0091062 3300046663 Bacteria 2086
205 Ga0495599_0145197 3300046678 Bacteria 1471
206 Ga0495658_0234325 3300046683 Bacteria 1152
207 Ga0495680_0378362 3300047322 Bacteria 981
208 Ga0501039_0453092 3300049575 Bacteria 1008
209 Ga0501040_0039536 3300049576 Bacteria 3208
210 Ga0501071_0008655 3300049587 Bacteria 6731
211 Ga0501074_0429742 3300049590 Bacteria 937
212 Ga0501083_0013703 3300049744 Bacteria 5672
213 Ga0501283_023030 3300049779 Bacteria 1008
214 nmdc:mga05p37_2731_c1 3300050507 Bacteria 20509
215 nmdc:mga05p37_399276_c1 3300050507 Bacteria 1605
216 nmdc:mga09592_5045_c1 3300050508 Bacteria 10714
217 nmdc:mga09592_71749_c1 3300050508 Bacteria 2939
218 nmdc:mga0qj67_321372_c1 3300050509 Bacteria 1253
219 nmdc:mga06r32_230423_c1 3300050510 Bacteria 1840
220 nmdc:mga08y16_84991_c1 3300050511 Bacteria 3298
221 nmdc:mga0n895_1936_c1 3300050512 Bacteria 15884
222 nmdc:mga0n895_210795_c1 3300050512 Bacteria 1973
223 nmdc:mga0n895_31208_c1 3300050512 Bacteria 5099
224 nmdc:mga0rr50_21967_c1 3300050513 Bacteria 4369
225 nmdc:mga0rr50_6533_c1 3300050513 Bacteria 7111
226 nmdc:mga08x19_1018_c1 3300050514 Bacteria 17482
227 nmdc:mga08x19_35136_c1 3300050514 Bacteria 3170
228 nmdc:mga0a205_274808_c1 3300050515 Bacteria 1561
229 nmdc:mga0a205_65490_c1 3300050515 Bacteria 3511
230 Ga0501082_0002017 3300060353 Bacteria 17846

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300033180 Ga0307510_10057023 Ga0307510_100570234 196
2 3300031548 Ga0307408_101022327 Ga0307408_1010223271 202
3 3300045051 Ga0451576_0000013 Ga0451576_0000013_502710_503375 203
4 3300025908 Ga0207643_10102619 Ga0207643_101026191 210
5 3300046615 Ga0495656_0126748 Ga0495656_0126748_38_691 215
6 3300005336 Ga0070680_100360923 Ga0070680_1003609232 219
7 3300005338 Ga0068868_100106341 Ga0068868_1001063412 219
8 3300005340 Ga0070689_100073878 Ga0070689_1000738782 219
9 3300005439 Ga0070711_100243946 Ga0070711_1002439463 219
10 3300005444 Ga0070694_100677043 Ga0070694_1006770431 219
11 3300005458 Ga0070681_10003269 Ga0070681_100032693 219
12 3300005518 Ga0070699_100018561 Ga0070699_1000185612 219
13 3300005544 Ga0070686_100005838 Ga0070686_1000058384 219
14 3300006846 Ga0075430_100022907 Ga0075430_1000229073 219
15 3300006847 Ga0075431_100095936 Ga0075431_1000959363 219
16 3300006871 Ga0075434_100000003 Ga0075434_10000000374 219
17 3300006871 Ga0075434_100071133 Ga0075434_1000711333 219
18 3300006914 Ga0075436_100004543 Ga0075436_1000045431 219
19 3300006914 Ga0075436_100046529 Ga0075436_1000465292 219
20 3300007076 Ga0075435_100029977 Ga0075435_1000299775 219
21 3300007265 Ga0099794_10032590 Ga0099794_100325902 219
22 3300007788 Ga0099795_10192161 Ga0099795_101921611 219
23 3300009147 Ga0114129_10923249 Ga0114129_109232493 219
24 3300009176 Ga0105242_10255185 Ga0105242_102551852 219
25 3300025912 Ga0207707_10008108 Ga0207707_100081082 219
26 3300025918 Ga0207662_10274494 Ga0207662_102744942 219
27 3300025936 Ga0207670_10015475 Ga0207670_100154752 219
28 3300026023 Ga0207677_10298252 Ga0207677_102982522 219
29 3300026116 Ga0207674_10200879 Ga0207674_102008792 219
30 3300027378 Ga0209981_1016661 Ga0209981_10166612 219
31 3300031731 Ga0307405_10300894 Ga0307405_103008942 219
32 3300032002 Ga0307416_100130770 Ga0307416_1001307703 219
33 3300035084 Ga0373928_0015981 Ga0373928_0015981_406_1065 219
34 3300035086 Ga0373934_0010860 Ga0373934_0010860_1421_2107 219
35 3300035091 Ga0373951_0050713 Ga0373951_0050713_316_975 219
36 3300035092 Ga0373952_0003346 Ga0373952_0003346_861_1520 219
37 3300035114 Ga0373939_0004457 Ga0373939_0004457_1911_2570 219
38 3300035115 Ga0373941_0000929 Ga0373941_0000929_596_1285 219
39 3300035117 Ga0373953_0104288 Ga0373953_0104288_76_762 219
40 3300035118 Ga0373954_0000003 Ga0373954_0000003_74461_75147 219
41 3300035691 Ga0373931_0155263 Ga0373931_0155263_614_1285 219
42 3300035724 Ga0373933_0003154 Ga0373933_0003154_2587_3273 219
43 3300036401 Ga0373937_0000249 Ga0373937_0000249_43915_44601 219
44 3300041406 Ga0439439_0020712 Ga0439439_0020712_461_1120 219
45 3300042001 Ga0439441_064342 Ga0439441_064342_49_708 219
46 3300042532 Ga0450893_0012908 Ga0450893_0012908_382_1044 219
47 3300045976 Ga0466967_0001092 Ga0466967_0001092_1677_2366 219
48 3300046459 Ga0495629_0070850 Ga0495629_0070850_1563_2222 219
49 3300046517 Ga0495630_0410014 Ga0495630_0410014_113_772 219
50 3300046526 Ga0495666_0220351 Ga0495666_0220351_138_797 219
51 3300046533 Ga0495640_0039374 Ga0495640_0039374_1777_2436 219
52 3300046535 Ga0495586_0064682 Ga0495586_0064682_203_862 219
53 3300046539 Ga0495621_0242888 Ga0495621_0242888_17_676 219
54 3300046663 Ga0495635_0091062 Ga0495635_0091062_887_1546 219
55 3300046683 Ga0495658_0234325 Ga0495658_0234325_12_671 219
56 3300047322 Ga0495680_0378362 Ga0495680_0378362_172_831 219
57 3300049779 Ga0501283_023030 Ga0501283_023030_179_844 219
58 3300050507 nmdc:mga05p37_399276_c1 nmdc:mga05p37_399276_c1_23_682 219
59 3300050508 nmdc:mga09592_71749_c1 nmdc:mga09592_71749_c1_1687_2346 219
60 3300050512 nmdc:mga0n895_1936_c1 nmdc:mga0n895_1936_c1_1865_2524 219
61 3300050512 nmdc:mga0n895_31208_c1 nmdc:mga0n895_31208_c1_200_859 219
62 3300050513 nmdc:mga0rr50_21967_c1 nmdc:mga0rr50_21967_c1_271_930 219
63 3300050514 nmdc:mga08x19_1018_c1 nmdc:mga08x19_1018_c1_9853_10521 219
64 3300050514 nmdc:mga08x19_35136_c1 nmdc:mga08x19_35136_c1_1864_2523 219
65 3300050515 nmdc:mga0a205_274808_c1 nmdc:mga0a205_274808_c1_662_1321 219
66 3300050515 nmdc:mga0a205_65490_c1 nmdc:mga0a205_65490_c1_734_1393 219
67 3300005327 Ga0070658_10026422 Ga0070658_100264223 220
68 3300005327 Ga0070658_10261511 Ga0070658_102615112 220
69 3300005330 Ga0070690_100018141 Ga0070690_1000181412 220
70 3300005334 Ga0068869_100000839 Ga0068869_1000008399 220
71 3300005335 Ga0070666_10146857 Ga0070666_101468572 220
72 3300005336 Ga0070680_100002595 Ga0070680_10000259514 220
73 3300005336 Ga0070680_100040938 Ga0070680_1000409382 220
74 3300005337 Ga0070682_100003686 Ga0070682_1000036869 220
75 3300005340 Ga0070689_100001532 Ga0070689_1000015329 220
76 3300005341 Ga0070691_10003164 Ga0070691_100031641 220
77 3300005343 Ga0070687_100001410 Ga0070687_1000014104 220
78 3300005345 Ga0070692_10112505 Ga0070692_101125052 220
79 3300005354 Ga0070675_100672844 Ga0070675_1006728442 220
80 3300005365 Ga0070688_100126635 Ga0070688_1001266352 220
81 3300005435 Ga0070714_100013370 Ga0070714_1000133705 220
82 3300005438 Ga0070701_10030633 Ga0070701_100306332 220
83 3300005439 Ga0070711_100359892 Ga0070711_1003598922 220
84 3300005440 Ga0070705_100000838 Ga0070705_1000008388 220
85 3300005441 Ga0070700_100007201 Ga0070700_1000072014 220
86 3300005444 Ga0070694_100001978 Ga0070694_1000019786 220
87 3300005444 Ga0070694_100005049 Ga0070694_1000050499 220
88 3300005444 Ga0070694_100053547 Ga0070694_1000535472 220
89 3300005458 Ga0070681_10031927 Ga0070681_100319271 220
90 3300005458 Ga0070681_10358232 Ga0070681_103582322 220
91 3300005459 Ga0068867_100001699 Ga0068867_1000016994 220
92 3300005468 Ga0070707_100570526 Ga0070707_1005705262 220
93 3300005471 Ga0070698_100223740 Ga0070698_1002237402 220
94 3300005530 Ga0070679_100017136 Ga0070679_1000171369 220
95 3300005536 Ga0070697_100281890 Ga0070697_1002818902 220
96 3300005544 Ga0070686_100002500 Ga0070686_1000025004 220
97 3300005545 Ga0070695_100015035 Ga0070695_1000150354 220
98 3300005545 Ga0070695_100085651 Ga0070695_1000856513 220
99 3300005546 Ga0070696_100002108 Ga0070696_1000021083 220
100 3300005546 Ga0070696_100069694 Ga0070696_1000696941 220
101 3300005546 Ga0070696_100103577 Ga0070696_1001035771 220
102 3300005546 Ga0070696_100252414 Ga0070696_1002524142 220
103 3300005546 Ga0070696_100323624 Ga0070696_1003236242 220
104 3300005547 Ga0070693_100000561 Ga0070693_1000005618 220
105 3300005549 Ga0070704_100000875 Ga0070704_1000008759 220
106 3300005549 Ga0070704_100107421 Ga0070704_1001074212 220
107 3300005563 Ga0068855_100005846 Ga0068855_1000058464 220
108 3300005563 Ga0068855_100017767 Ga0068855_1000177679 220
109 3300005563 Ga0068855_100051445 Ga0068855_1000514453 220
110 3300005563 Ga0068855_100453107 Ga0068855_1004531072 220
111 3300005578 Ga0068854_100011980 Ga0068854_1000119808 220
112 3300005614 Ga0068856_100096202 Ga0068856_1000962022 220
113 3300005614 Ga0068856_100160274 Ga0068856_1001602742 220
114 3300005615 Ga0070702_100000176 Ga0070702_1000001769 220
115 3300005616 Ga0068852_100030505 Ga0068852_1000305053 220
116 3300005616 Ga0068852_100118606 Ga0068852_1001186062 220
117 3300005617 Ga0068859_100013382 Ga0068859_1000133824 220
118 3300005718 Ga0068866_10001952 Ga0068866_100019524 220
119 3300005719 Ga0068861_100003271 Ga0068861_1000032716 220
120 3300005842 Ga0068858_100006826 Ga0068858_1000068264 220
121 3300005843 Ga0068860_100003610 Ga0068860_1000036106 220
122 3300005844 Ga0068862_100250323 Ga0068862_1002503232 220
123 3300005985 Ga0081539_10059773 Ga0081539_100597732 220
124 3300006237 Ga0097621_100019435 Ga0097621_1000194356 220
125 3300006358 Ga0068871_100002743 Ga0068871_1000027434 220
126 3300006844 Ga0075428_100000130 Ga0075428_10000013041 220
127 3300006844 Ga0075428_100067470 Ga0075428_1000674703 220
128 3300006846 Ga0075430_100481469 Ga0075430_1004814692 220
129 3300006847 Ga0075431_100342628 Ga0075431_1003426282 220
130 3300006847 Ga0075431_100358993 Ga0075431_1003589932 220
131 3300006880 Ga0075429_100000541 Ga0075429_1000005412 220
132 3300006880 Ga0075429_100531639 Ga0075429_1005316392 220
133 3300006881 Ga0068865_100391715 Ga0068865_1003917151 220
134 3300006931 Ga0097620_100013382 Ga0097620_1000133824 220
135 3300009093 Ga0105240_10002306 Ga0105240_1000230613 220
136 3300009093 Ga0105240_10240829 Ga0105240_102408292 220
137 3300009098 Ga0105245_10002959 Ga0105245_100029599 220
138 3300009147 Ga0114129_10000604 Ga0114129_1000060420 220
139 3300009148 Ga0105243_10002380 Ga0105243_100023808 220
140 3300009174 Ga0105241_10019341 Ga0105241_100193412 220
141 3300009176 Ga0105242_10001922 Ga0105242_100019224 220
142 3300009176 Ga0105242_10348886 Ga0105242_103488862 220
143 3300009177 Ga0105248_10071930 Ga0105248_100719302 220
144 3300009553 Ga0105249_10087255 Ga0105249_100872552 220
145 3300009553 Ga0105249_10207009 Ga0105249_102070092 220
146 3300010375 Ga0105239_10121723 Ga0105239_101217231 220
147 3300013104 Ga0157370_10232945 Ga0157370_102329452 220
148 3300013297 Ga0157378_10001528 Ga0157378_100015289 220
149 3300013306 Ga0163162_10209015 Ga0163162_102090152 220
150 3300014326 Ga0157380_10083790 Ga0157380_100837904 220
151 3300014968 Ga0157379_10590232 Ga0157379_105902322 220
152 3300014969 Ga0157376_10017543 Ga0157376_100175433 220
153 3300025899 Ga0207642_10000622 Ga0207642_100006224 220
154 3300025901 Ga0207688_10121096 Ga0207688_101210962 220
155 3300025904 Ga0207647_10166985 Ga0207647_101669852 220
156 3300025909 Ga0207705_10009327 Ga0207705_100093276 220
157 3300025910 Ga0207684_10705716 Ga0207684_107057161 220
158 3300025911 Ga0207654_10087672 Ga0207654_100876722 220
159 3300025912 Ga0207707_10007623 Ga0207707_100076237 220
160 3300025912 Ga0207707_10136603 Ga0207707_101366032 220
161 3300025913 Ga0207695_10002060 Ga0207695_1000206013 220
162 3300025916 Ga0207663_10461146 Ga0207663_104611461 220
163 3300025917 Ga0207660_10001983 Ga0207660_100019839 220
164 3300025917 Ga0207660_10209412 Ga0207660_102094122 220
165 3300025918 Ga0207662_10000628 Ga0207662_1000062811 220
166 3300025921 Ga0207652_10050727 Ga0207652_100507273 220
167 3300025927 Ga0207687_10000958 Ga0207687_100009589 220
168 3300025929 Ga0207664_10011871 Ga0207664_100118713 220
169 3300025934 Ga0207686_10001947 Ga0207686_100019476 220
170 3300025935 Ga0207709_10002147 Ga0207709_100021478 220
171 3300025936 Ga0207670_10001125 Ga0207670_100011255 220
172 3300025938 Ga0207704_10001381 Ga0207704_100013814 220
173 3300025941 Ga0207711_10055259 Ga0207711_100552594 220
174 3300025942 Ga0207689_10002527 Ga0207689_100025274 220
175 3300025949 Ga0207667_10002642 Ga0207667_100026423 220
176 3300025949 Ga0207667_10107150 Ga0207667_101071504 220
177 3300025949 Ga0207667_10123712 Ga0207667_101237123 220
178 3300025961 Ga0207712_10031292 Ga0207712_100312924 220
179 3300025981 Ga0207640_10006432 Ga0207640_100064328 220
180 3300026035 Ga0207703_10046730 Ga0207703_100467302 220
181 3300026075 Ga0207708_10003597 Ga0207708_100035979 220
182 3300026078 Ga0207702_10072123 Ga0207702_100721232 220
183 3300026078 Ga0207702_10202620 Ga0207702_102026203 220
184 3300026088 Ga0207641_10283600 Ga0207641_102836002 220
185 3300026089 Ga0207648_10003587 Ga0207648_1000358710 220
186 3300026118 Ga0207675_100012063 Ga0207675_1000120634 220
187 3300026142 Ga0207698_10021546 Ga0207698_100215463 220
188 3300027907 Ga0207428_10009247 Ga0207428_100092473 220
189 3300028380 Ga0268265_10251890 Ga0268265_102518902 220
190 3300028381 Ga0268264_10008894 Ga0268264_100088946 220
191 3300032002 Ga0307416_100871260 Ga0307416_1008712602 220
192 3300034816 Ga0373930_0004115 Ga0373930_0004115_1474_2142 220
193 3300034817 Ga0373948_0004888 Ga0373948_0004888_248_916 220
194 3300035092 Ga0373952_0030228 Ga0373952_0030228_330_998 220
195 3300035092 Ga0373952_0034502 Ga0373952_0034502_352_1017 220
196 3300035112 Ga0373932_0040147 Ga0373932_0040147_196_864 220
197 3300035121 Ga0373960_0124470 Ga0373960_0124470_88_756 220
198 3300035172 Ga0373955_0127431 Ga0373955_0127431_763_1452 220
199 3300035241 Ga0373961_0003484 Ga0373961_0003484_341_1009 220
200 3300035241 Ga0373961_0097878 Ga0373961_0097878_107_775 220
201 3300035691 Ga0373931_0060844 Ga0373931_0060844_597_1265 220
202 3300035691 Ga0373931_0117000 Ga0373931_0117000_260_928 220
203 3300035691 Ga0373931_0194837 Ga0373931_0194837_286_954 220
204 3300035724 Ga0373933_0171881 Ga0373933_0171881_132_803 220
205 3300038443 Ga0395901_0039150 Ga0395901_0039150_4107_4772 220
206 3300042001 Ga0439441_000209 Ga0439441_000209_1051_1716 220
207 3300042435 Ga0439434_0003660 Ga0439434_0003660_1329_1997 220
208 3300042436 Ga0439435_0006258 Ga0439435_0006258_1832_2500 220
209 3300042876 Ga0451577_0035957 Ga0451577_0035957_3562_4230 220
210 3300044712 Ga0453684_0397687 Ga0453684_0397687_694_1362 220
211 3300045051 Ga0451576_0007356 Ga0451576_0007356_7259_7927 220
212 3300045051 Ga0451576_0436866 Ga0451576_0436866_341_1009 220
213 3300045051 Ga0451576_0713504 Ga0451576_0713504_180_848 220
214 3300045051 Ga0451576_0881338 Ga0451576_0881338_32_700 220
215 3300046537 Ga0495598_0011213 Ga0495598_0011213_1463_2125 220
216 3300046558 Ga0495633_0269730 Ga0495633_0269730_73_738 220
217 3300046678 Ga0495599_0145197 Ga0495599_0145197_463_1137 220
218 3300049575 Ga0501039_0453092 Ga0501039_0453092_28_693 220
219 3300049576 Ga0501040_0039536 Ga0501040_0039536_1201_1869 220
220 3300049587 Ga0501071_0008655 Ga0501071_0008655_2066_2728 220
221 3300049590 Ga0501074_0429742 Ga0501074_0429742_57_725 220
222 3300049744 Ga0501083_0013703 Ga0501083_0013703_943_1605 220
223 3300050507 nmdc:mga05p37_2731_c1 nmdc:mga05p37_2731_c1_538_1206 220
224 3300050508 nmdc:mga09592_5045_c1 nmdc:mga09592_5045_c1_1344_2012 220
225 3300050509 nmdc:mga0qj67_321372_c1 nmdc:mga0qj67_321372_c1_368_1036 220
226 3300050510 nmdc:mga06r32_230423_c1 nmdc:mga06r32_230423_c1_403_1071 220
227 3300050511 nmdc:mga08y16_84991_c1 nmdc:mga08y16_84991_c1_1413_2081 220
228 3300050512 nmdc:mga0n895_210795_c1 nmdc:mga0n895_210795_c1_120_782 220
229 3300050513 nmdc:mga0rr50_6533_c1 nmdc:mga0rr50_6533_c1_3918_4580 220
230 3300060353 Ga0501082_0002017 Ga0501082_0002017_14594_15256 220

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06026

Rib_5-P_isom_A

Ribose 5-phosphate isomerase A (phosphoriboisomerase A)

48

213

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1m0s-assembly1.cif.gz_B northeast structural genomics consortium (nesg id ir21) 0.9835 1 218
6mc0-assembly1.cif.gz_B crystal structure of ribose-5-phosphate isomerase from legionella pneumophila with bound substrate ribose-5-phosphate and product ribulose-5-phosphate 0.9794 3 218
5uf2-assembly1.cif.gz_A crystal structure of ribose 5 phosphate isomerase a from neisseria gonorrhoeae 0.9786 3 220
1ks2-assembly1.cif.gz_B crystal structure analysis of the rpia, structural genomics, protein ec1268. 0.9759 3 218
3kwm-assembly2.cif.gz_C crystal structure of ribose-5-isomerase a 0.9759 1 217
ID Description Score Start End Superfamily
4m8lB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9943 126 196 3.30.70.260
2pjmA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9701 126 196 3.30.70.260
4m8lB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9672 126 196 3.30.70.260
4gmkB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9511 5 118 3.40.50.1360
2f8mB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9504 4 119 3.40.50.1360
ID Description Score Start End GO Terms
AF-A0A2G2QB15-F1-model_v4 Ribose 5-phosphate isomerase A (EC 5.3.1.6) 0.9942 102 218 GO:0004751
GO:0005829
GO:0006014
GO:0009052
AF-A0A7C6F0N3-F1-model_v4 Ribose 5-phosphate isomerase A (EC 5.3.1.6) 0.9928 115 218 GO:0004751
GO:0005829
GO:0006014
GO:0009052
AF-A0A0F9BJH1-F1-model_v4 Ribose-5-phosphate isomerase 0.9909 126 216 GO:0004751
GO:0005829
GO:0006014
GO:0009052
AF-G0JNF3-F1-model_v4 Ribose-5-phosphate isomerase A (EC 5.3.1.6) (Phosphoriboisomerase A) (PRI) 0.9899 1 218 GO:0004751
GO:0005829
GO:0006014
GO:0009052
AF-A4MYA4-F1-model_v4 deleted 0.9898 117 218

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pLDDT pTM Quality
94.65 0.9 High
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Predicted Structure (AlphaFold2)

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