F342995

General Info

Members Datasets Scaffolds Average Seq Length
230 166 460 590

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10059510|Ga0105237_100595102
Length 674
Sequence MRGNPKASSLRGAKRRSDPSFLFAALWIASRSLSSGAHSRDPLARNDGVGRPAAIDVDANRAGASVAFVANICRDDTGMRLPMDARAPRTSPDAAATPRRGADHIAPDCAGQNFYAIDRGLRDLLAHYLTAEDFRQLAPHFDRLGRLAGGRLDELARIADRHPPVLHPRDRFGRDEDFIDYHAAYREMEQIAFGDFQFHAMSHRAGALGMDRPLPAVAKYALQYLFVQAEFGLMCPISVTDTSIHLIRKFASTELQDYLLPKMLSGDVALMWKGTQFMTERAGGSDVGSIETTARLEDGEWRLSGDKWFCSHADADVALLLARPEGAPAGTKGLALFALPRRLKDGSRNAYRIVRLKDKLGTRSMASGEILLEGAVAYLVGQADQGLRQMMEQVNLSRLSHGVRAAAMMRRCVNEAMVCARSRAAFGNTIIDYPLLRRQLLKITLPAEQALSMFLFAADTMDRANAGSADAANCLRILTPLLKFRACRDNIPVATGAMEVRGGNGYIEEWVQARLVRDAHIGVLWEGTSNINALDIISRAVGKSRAHKSLQAALAKLLDEATTISAAFRDRLRRTLDRALEFAERVAAEPALEADARQAASGLYHVTSAVLMTAEAARASADARRALFARLVLEHRLGARDPLAPQSHAWERAAAEMLLSERNVVIGEIGGLLV

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
61 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
62 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
64 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
65 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
66 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
70 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
71 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
85 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
86 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
87 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
88 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
89 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
102 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
143 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
144 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
147 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
148 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
149 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
152 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
153 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
154 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
155 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
156 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
157 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
158 2904699407
159 2906610324
160 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
161 2922425934
162 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
163 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
164 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
165 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
166 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.71
Metatranscriptomes 0.44
Isolates 4.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.52
Nodule 4.35
Rhizoplane 5.65
Rhizosphere 76.96
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10059510 3300009545 Bacteria 3822
2 Ga0070658_10013130 3300005327 Bacteria 6647
3 Ga0070683_100183972 3300005329 Bacteria 1983
4 Ga0070680_100002434 3300005336 Bacteria 13789
5 Ga0070680_100014226 3300005336 Bacteria 6214
6 Ga0068868_100006037 3300005338 Bacteria 8555
7 Ga0070660_100018509 3300005339 Bacteria 5090
8 Ga0070691_10002380 3300005341 Bacteria 8336
9 Ga0070667_100157423 3300005367 Bacteria 1999
10 Ga0070709_10029093 3300005434 Bacteria 3301
11 Ga0070714_100031870 3300005435 Bacteria 4399
12 Ga0070713_100003793 3300005436 Bacteria 9999
13 Ga0070711_100003225 3300005439 Bacteria 9471
14 Ga0070681_10021244 3300005458 Bacteria 6505
15 Ga0070681_10133117 3300005458 Bacteria 2418
16 Ga0070679_100004053 3300005530 Bacteria 13492
17 Ga0070679_100029473 3300005530 Bacteria 5415
18 Ga0070684_100002416 3300005535 Bacteria 13772
19 Ga0068855_100014317 3300005563 Bacteria 9551
20 Ga0068855_100014872 3300005563 Bacteria 9373
21 Ga0068856_100028000 3300005614 Bacteria 5498
22 Ga0068856_100028607 3300005614 Bacteria 5444
23 Ga0081455_10004683 3300005937 Bacteria 15227
24 Ga0081455_10010166 3300005937 Bacteria 9582
25 Ga0081540_1023526 3300005983 Bacteria 3600
26 Ga0081540_1028461 3300005983 Bacteria 3138
27 Ga0081539_10000003 3300005985 Bacteria 594833
28 Ga0081539_10000530 3300005985 Bacteria 79454
29 Ga0081539_10005249 3300005985 Bacteria 13372
30 Ga0070716_100025795 3300006173 Bacteria 3141
31 Ga0075362_10005147 3300006177 Bacteria 4762
32 Ga0075369_10000258 3300006186 Bacteria 15580
33 Ga0075369_10023770 3300006186 Bacteria 2535
34 Ga0068871_100165193 3300006358 Bacteria 1895
35 Ga0075428_100010495 3300006844 Bacteria 10292
36 Ga0075431_100008298 3300006847 Bacteria 10388
37 Ga0075429_100073896 3300006880 Bacteria 2969
38 Ga0075435_100022369 3300007076 Bacteria 4878
39 Ga0099794_10050606 3300007265 Bacteria 1999
40 Ga0105240_10005158 3300009093 Bacteria 19536
41 Ga0111539_10004919 3300009094 Bacteria 17383
42 Ga0111539_10013797 3300009094 Bacteria 10097
43 Ga0114129_10006789 3300009147 Bacteria 16254
44 Ga0114129_10007110 3300009147 Bacteria 15925
45 Ga0105243_10000743 3300009148 Bacteria 31200
46 Ga0105238_10002194 3300009551 Bacteria 19716
47 Ga0105238_10017048 3300009551 Bacteria 7374
48 Ga0099796_10010434 3300010159 Bacteria 2554
49 Ga0105239_10048843 3300010375 Bacteria 4639
50 Ga0105239_10082997 3300010375 Bacteria 3529
51 Ga0157369_10004156 3300013105 Bacteria 17145
52 Ga0157369_10041440 3300013105 Bacteria 5026
53 Ga0157374_10017115 3300013296 Bacteria 6381
54 Ga0157372_10121340 3300013307 Bacteria 3002
55 Ga0163163_10039070 3300014325 Bacteria 4630
56 Ga0213876_10012825 3300021384 Bacteria 4456
57 Ga0213875_10000046 3300021388 Bacteria 149850
58 Ga0207707_10001215 3300025912 Bacteria 24196
59 Ga0207707_10015350 3300025912 Bacteria 6669
60 Ga0207707_10043169 3300025912 Bacteria 3934
61 Ga0207707_10099644 3300025912 Bacteria 2539
62 Ga0207707_10101230 3300025912 Bacteria 2518
63 Ga0207695_10044255 3300025913 Bacteria 4736
64 Ga0207695_10101826 3300025913 Bacteria 2866
65 Ga0207695_10110632 3300025913 Bacteria 2727
66 Ga0207657_10002721 3300025919 Bacteria 19035
67 Ga0207652_10003842 3300025921 Bacteria 12317
68 Ga0207652_10101591 3300025921 Bacteria 2540
69 Ga0207694_10044794 3300025924 Bacteria 3416
70 Ga0207709_10000085 3300025935 Bacteria 160514
71 Ga0207665_10040904 3300025939 Bacteria 3094
72 Ga0207661_10002849 3300025944 Bacteria 11950
73 Ga0207661_10039764 3300025944 Bacteria 3693
74 Ga0207667_10004722 3300025949 Bacteria 16682
75 Ga0207667_10009116 3300025949 Bacteria 11724
76 Ga0207667_10022758 3300025949 Bacteria 6913
77 Ga0207702_10000056 3300026078 Bacteria 131186
78 Ga0207702_10059744 3300026078 Bacteria 3248
79 Ga0207674_10005560 3300026116 Bacteria 14945
80 Ga0207674_10030039 3300026116 Bacteria 5717
81 Ga0207683_10019569 3300026121 Bacteria 5782
82 Ga0207428_10019276 3300027907 Bacteria 5817
83 Ga0268266_10076317 3300028379 Bacteria 2912
84 Ga0265332_10011467 3300031238 Bacteria 3941
85 Ga0265340_10004459 3300031247 Bacteria 7826
86 Ga0265314_10000900 3300031711 Bacteria 35261
87 Ga0307510_10061565 3300033180 Bacteria 3846
88 Ga0373934_0003622 3300035086 Bacteria 5676
89 Ga0373934_0026673 3300035086 Bacteria 2241
90 Ga0373923_0003829 3300035111 Bacteria 4895
91 Ga0373923_0010230 3300035111 Bacteria 3407
92 Ga0373939_0007344 3300035114 Bacteria 2675
93 Ga0373953_0000180 3300035117 Bacteria 16789
94 Ga0373954_0000173 3300035118 Bacteria 23103
95 Ga0373957_0000352 3300035120 Bacteria 11706
96 Ga0373935_0004713 3300035692 Bacteria 8020
97 Ga0373927_0000071 3300035695 Bacteria 73794
98 Ga0373927_0003223 3300035695 Bacteria 11751
99 Ga0373927_0013039 3300035695 Bacteria 5529
100 Ga0373933_0000306 3300035724 Bacteria 31653
101 Ga0373933_0001605 3300035724 Bacteria 13235
102 Ga0373937_0054931 3300036401 Bacteria 3655
103 Ga0373937_0081856 3300036401 Bacteria 2986
104 Ga0373937_0088975 3300036401 Bacteria 2859
105 Ga0372808_000272 3300036459 Bacteria 3543
106 Ga0373925_0009180 3300037068 Bacteria 7200
107 Ga0373925_0022685 3300037068 Bacteria 4580
108 Ga0395899_0060066 3300037312 Bacteria 2801
109 Ga0395899_0061177 3300037312 Bacteria 2773
110 Ga0395900_0044464 3300037418 Bacteria 4576
111 Ga0395898_0024207 3300037466 Bacteria 6125
112 Ga0395898_0045393 3300037466 Bacteria 4319
113 Ga0395898_0133968 3300037466 Bacteria 2372
114 Ga0436364_0402761 3300037853 Bacteria 14147
115 Ga0395901_0007600 3300038443 Bacteria 10944
116 Ga0395901_0029414 3300038443 Bacteria 5657
117 Ga0436365_1872662 3300039437 Bacteria 2834
118 Ga0436361_0265827 3300039447 Bacteria 3729
119 Ga0436361_0432617 3300039447 Bacteria 2426
120 Ga0436361_0517462 3300039447 Bacteria 2950
121 Ga0466957_0024451 3300044842 Bacteria 3575
122 Ga0466959_0065762 3300045049 Bacteria 2631
123 Ga0495592_0009030 3300046454 Bacteria 7492
124 Ga0495592_0011692 3300046454 Bacteria 6648
125 Ga0495603_0000035 3300046455 Bacteria 57510
126 Ga0495603_0006478 3300046455 Bacteria 7013
127 Ga0495629_0000081 3300046459 Bacteria 85305
128 Ga0495629_0000198 3300046459 Bacteria 53334
129 Ga0495641_0006969 3300046461 Bacteria 7190
130 Ga0495653_0001272 3300046463 Bacteria 19517
131 Ga0495580_0028604 3300046472 Bacteria 4050
132 Ga0495582_0000021 3300046473 Bacteria 88264
133 Ga0495662_0009515 3300046476 Bacteria 4768
134 Ga0495664_0014116 3300046477 Bacteria 4526
135 Ga0495664_0038962 3300046477 Bacteria 2807
136 Ga0495594_0000979 3300046499 Bacteria 14837
137 Ga0495606_0000753 3300046507 Bacteria 50074
138 Ga0495608_0002098 3300046511 Bacteria 14362
139 Ga0495628_0033624 3300046516 Bacteria 4130
140 Ga0495630_0007791 3300046517 Bacteria 7666
141 Ga0495630_0015737 3300046517 Bacteria 5526
142 Ga0495652_0020910 3300046529 Bacteria 5815
143 Ga0495665_0002048 3300046531 Bacteria 10915
144 Ga0495665_0006250 3300046531 Bacteria 6425
145 Ga0495640_0003804 3300046533 Bacteria 12120
146 Ga0495586_0047913 3300046535 Bacteria 2308
147 Ga0495587_0002078 3300046536 Bacteria 13380
148 Ga0495622_0001245 3300046557 Bacteria 13083
149 Ga0495634_0000261 3300046642 Bacteria 49735
150 Ga0495634_0060482 3300046642 Bacteria 2520
151 Ga0495635_0000615 3300046663 Bacteria 22950
152 Ga0495635_0005458 3300046663 Bacteria 8841
153 Ga0495623_0025714 3300046679 Bacteria 3791
154 Ga0495646_0012010 3300046680 Bacteria 5510
155 Ga0495647_0002442 3300046681 Bacteria 5859
156 Ga0495613_0043080 3300046689 Bacteria 3339
157 Ga0495613_0062114 3300046689 Bacteria 2735
158 Ga0495624_0000682 3300046690 Bacteria 26624
159 Ga0495600_0003424 3300046809 Bacteria 9328
160 Ga0495581_0018740 3300047315 Bacteria 4019
161 Ga0495581_0032507 3300047315 Bacteria 3021
162 Ga0495604_0006102 3300047317 Bacteria 9562
163 Ga0495674_0001257 3300047319 Bacteria 24613
164 Ga0495674_0076956 3300047319 Bacteria 2869
165 Ga0495676_0093790 3300047321 Bacteria 2238
166 Ga0495680_0010787 3300047322 Bacteria 8138
167 Ga0495675_0009871 3300047444 Bacteria 5951
168 Ga0495684_0000208 3300047471 Bacteria 45416
169 Ga0495684_0068134 3300047471 Bacteria 2706
170 Ga0495593_0000072 3300047673 Bacteria 43039
171 Ga0495593_0004094 3300047673 Bacteria 8670
172 Ga0495593_0051269 3300047673 Bacteria 2184
173 Ga0496100_0011913 3300048903 Bacteria 4966
174 Ga0496101_0004865 3300048904 Bacteria 8522
175 Ga0496102_0190206 3300048905 Bacteria 1934
176 Ga0496103_0079807 3300048906 Bacteria 2057
177 Ga0496107_0001354 3300048910 Bacteria 15064
178 Ga0496109_0055150 3300048912 Bacteria 3626
179 Ga0496110_0058607 3300048913 Bacteria 3392
180 Ga0496111_0099897 3300048914 Bacteria 2131
181 Ga0496114_0127060 3300048917 Bacteria 2198
182 Ga0496115_0002257 3300048918 Bacteria 13795
183 Ga0496115_0111592 3300048918 Bacteria 2247
184 Ga0496115_0142984 3300048918 Bacteria 1973
185 Ga0496115_0146711 3300048918 Bacteria 1947
186 Ga0496119_0005295 3300048922 Bacteria 12426
187 Ga0496120_0045603 3300048923 Bacteria 2539
188 Ga0496121_0085173 3300048924 Bacteria 2489
189 Ga0496126_0061036 3300048929 Bacteria 3388
190 Ga0496126_0099275 3300048929 Bacteria 2550
191 Ga0501070_0015632 3300049586 Bacteria 6381
192 Ga0501080_0019021 3300049742 Bacteria 6361
193 nmdc:mga03683_777_c1 3300050489 Bacteria 9169
194 nmdc:mga07m45_39678_c1 3300050496 Bacteria 2632
195 nmdc:mga05p37_12590_c1 3300050507 Bacteria 10101
196 nmdc:mga05p37_7923_c1 3300050507 Bacteria 12538
197 nmdc:mga09592_57044_c1 3300050508 Bacteria 3300
198 nmdc:mga09592_9583_c1 3300050508 Bacteria 7867
199 nmdc:mga06r32_3030_c1 3300050510 Bacteria 15057
200 nmdc:mga08y16_12390_c1 3300050511 Bacteria 8968
201 nmdc:mga08y16_20321_c1 3300050511 Bacteria 7010
202 nmdc:mga0rr50_4373_c1 3300050513 Bacteria 8299
203 Ga0495601_0024607 3300053077 Bacteria 3709
204 Ga0500610_0000022 3300053079 Bacteria 60344
205 Ga0500635_0002519 3300053080 Bacteria 4550
206 Ga0495595_0001220 3300053084 Bacteria 10003
207 Ga0495619_0000854 3300053085 Bacteria 19986
208 Ga0495619_0043236 3300053085 Bacteria 2953
209 Ga0500641_0002731 3300053096 Bacteria 6232
210 Ga0500554_003883 3300053102 Bacteria 3106
211 Ga0500595_000723 3300053119 Bacteria 19634
212 Ga0500603_000158 3300053150 Bacteria 16730
213 Ga0500616_0008674 3300053153 Bacteria 6280
214 Ga0500638_010701 3300053162 Bacteria 4032
215 Ga0500637_0000143 3300053178 Bacteria 26106
216 Ga0500637_0000157 3300053178 Bacteria 24963
217 2513889797 2513237141 Bacteria 8496279
218 2524540892 2524023228 Bacteria 10118060
219 2728750827 2728368998 Bacteria 8720350
220 2793070904 2791355197 Bacteria 8420563
221 2903758308 2903748898 Bacteria 9972761
222 2904701597
223 2906610420
224 2908743934 2908739725 Bacteria 8628932
225 2922428940
226 3005479089 3005474847 Bacteria 9259049
227 8006942265 8006933436 Bacteria 10410654
228 8006981999 8006973647 Bacteria 10679141
229 8019557995 8019555841 Bacteria 9642137
230 8019567295 8019565922 Bacteria 9639779
231 Ga0105237_10059510
232 Ga0070658_10013130
233 Ga0070683_100183972
234 Ga0070680_100002434
235 Ga0070680_100014226
236 Ga0068868_100006037
237 Ga0070660_100018509
238 Ga0070691_10002380
239 Ga0070667_100157423
240 Ga0070709_10029093
241 Ga0070714_100031870
242 Ga0070713_100003793
243 Ga0070711_100003225
244 Ga0070681_10021244
245 Ga0070681_10133117
246 Ga0070679_100004053
247 Ga0070679_100029473
248 Ga0070684_100002416
249 Ga0068855_100014317
250 Ga0068855_100014872
251 Ga0068856_100028000
252 Ga0068856_100028607
253 Ga0081455_10004683
254 Ga0081455_10010166
255 Ga0081540_1023526
256 Ga0081540_1028461
257 Ga0081539_10000003
258 Ga0081539_10000530
259 Ga0081539_10005249
260 Ga0070716_100025795
261 Ga0075362_10005147
262 Ga0075369_10000258
263 Ga0075369_10023770
264 Ga0068871_100165193
265 Ga0075428_100010495
266 Ga0075431_100008298
267 Ga0075429_100073896
268 Ga0075435_100022369
269 Ga0099794_10050606
270 Ga0105240_10005158
271 Ga0111539_10004919
272 Ga0111539_10013797
273 Ga0114129_10006789
274 Ga0114129_10007110
275 Ga0105243_10000743
276 Ga0105238_10002194
277 Ga0105238_10017048
278 Ga0099796_10010434
279 Ga0105239_10048843
280 Ga0105239_10082997
281 Ga0157369_10004156
282 Ga0157369_10041440
283 Ga0157374_10017115
284 Ga0157372_10121340
285 Ga0163163_10039070
286 Ga0213876_10012825
287 Ga0213875_10000046
288 Ga0207707_10001215
289 Ga0207707_10015350
290 Ga0207707_10043169
291 Ga0207707_10099644
292 Ga0207707_10101230
293 Ga0207695_10044255
294 Ga0207695_10101826
295 Ga0207695_10110632
296 Ga0207657_10002721
297 Ga0207652_10003842
298 Ga0207652_10101591
299 Ga0207694_10044794
300 Ga0207709_10000085
301 Ga0207665_10040904
302 Ga0207661_10002849
303 Ga0207661_10039764
304 Ga0207667_10004722
305 Ga0207667_10009116
306 Ga0207667_10022758
307 Ga0207702_10000056
308 Ga0207702_10059744
309 Ga0207674_10005560
310 Ga0207674_10030039
311 Ga0207683_10019569
312 Ga0207428_10019276
313 Ga0268266_10076317
314 Ga0265332_10011467
315 Ga0265340_10004459
316 Ga0265314_10000900
317 Ga0307510_10061565
318 Ga0373934_0003622
319 Ga0373934_0026673
320 Ga0373923_0003829
321 Ga0373923_0010230
322 Ga0373939_0007344
323 Ga0373953_0000180
324 Ga0373954_0000173
325 Ga0373957_0000352
326 Ga0373935_0004713
327 Ga0373927_0000071
328 Ga0373927_0003223
329 Ga0373927_0013039
330 Ga0373933_0000306
331 Ga0373933_0001605
332 Ga0373937_0054931
333 Ga0373937_0081856
334 Ga0373937_0088975
335 Ga0372808_000272
336 Ga0373925_0009180
337 Ga0373925_0022685
338 Ga0395899_0060066
339 Ga0395899_0061177
340 Ga0395900_0044464
341 Ga0395898_0024207
342 Ga0395898_0045393
343 Ga0395898_0133968
344 Ga0436364_0402761
345 Ga0395901_0007600
346 Ga0395901_0029414
347 Ga0436365_1872662
348 Ga0436361_0265827
349 Ga0436361_0432617
350 Ga0436361_0517462
351 Ga0466957_0024451
352 Ga0466959_0065762
353 Ga0495592_0009030
354 Ga0495592_0011692
355 Ga0495603_0000035
356 Ga0495603_0006478
357 Ga0495629_0000081
358 Ga0495629_0000198
359 Ga0495641_0006969
360 Ga0495653_0001272
361 Ga0495580_0028604
362 Ga0495582_0000021
363 Ga0495662_0009515
364 Ga0495664_0014116
365 Ga0495664_0038962
366 Ga0495594_0000979
367 Ga0495606_0000753
368 Ga0495608_0002098
369 Ga0495628_0033624
370 Ga0495630_0007791
371 Ga0495630_0015737
372 Ga0495652_0020910
373 Ga0495665_0002048
374 Ga0495665_0006250
375 Ga0495640_0003804
376 Ga0495586_0047913
377 Ga0495587_0002078
378 Ga0495622_0001245
379 Ga0495634_0000261
380 Ga0495634_0060482
381 Ga0495635_0000615
382 Ga0495635_0005458
383 Ga0495623_0025714
384 Ga0495646_0012010
385 Ga0495647_0002442
386 Ga0495613_0043080
387 Ga0495613_0062114
388 Ga0495624_0000682
389 Ga0495600_0003424
390 Ga0495581_0018740
391 Ga0495581_0032507
392 Ga0495604_0006102
393 Ga0495674_0001257
394 Ga0495674_0076956
395 Ga0495676_0093790
396 Ga0495680_0010787
397 Ga0495675_0009871
398 Ga0495684_0000208
399 Ga0495684_0068134
400 Ga0495593_0000072
401 Ga0495593_0004094
402 Ga0495593_0051269
403 Ga0496100_0011913
404 Ga0496101_0004865
405 Ga0496102_0190206
406 Ga0496103_0079807
407 Ga0496107_0001354
408 Ga0496109_0055150
409 Ga0496110_0058607
410 Ga0496111_0099897
411 Ga0496114_0127060
412 Ga0496115_0002257
413 Ga0496115_0111592
414 Ga0496115_0142984
415 Ga0496115_0146711
416 Ga0496119_0005295
417 Ga0496120_0045603
418 Ga0496121_0085173
419 Ga0496126_0061036
420 Ga0496126_0099275
421 Ga0501070_0015632
422 Ga0501080_0019021
423 nmdc:mga03683_777_c1
424 nmdc:mga07m45_39678_c1
425 nmdc:mga05p37_12590_c1
426 nmdc:mga05p37_7923_c1
427 nmdc:mga09592_57044_c1
428 nmdc:mga09592_9583_c1
429 nmdc:mga06r32_3030_c1
430 nmdc:mga08y16_12390_c1
431 nmdc:mga08y16_20321_c1
432 nmdc:mga0rr50_4373_c1
433 Ga0495601_0024607
434 Ga0500610_0000022
435 Ga0500635_0002519
436 Ga0495595_0001220
437 Ga0495619_0000854
438 Ga0495619_0043236
439 Ga0500641_0002731
440 Ga0500554_003883
441 Ga0500595_000723
442 Ga0500603_000158
443 Ga0500616_0008674
444 Ga0500638_010701
445 Ga0500637_0000143
446 Ga0500637_0000157
447 2513889797
448 2524540892
449 2728750827
450 2793070904
451 2903758308
452 2904701597
453 2906610420
454 2908743934
455 2922428940
456 3005479089
457 8006942265
458 8006981999
459 8019557995
460 8019567295

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

384

542

0.96

PF18158

AidB_N

Adaptive response protein AidB N-terminal domain

105

268

0.9

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

275

375

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sd8-assembly1.cif.gz_X bd2924 apo-form 0.9158 19 539
6sd8-assembly1.cif.gz_X bd2924 apo-form 0.9054 19 539
5ez3-assembly1.cif.gz_A crystal structure acyl-coa dehydrogenase from brucella melitensis in complex with fad 0.8898 12 583
7p9x-assembly3.cif.gz_D structure of cyclohex-1-ene-1-carboxyl-coa dehydrogenase complexed with cyclohex-1-ene-1-carboxyl-coa 0.888 55 460
3u33-assembly3.cif.gz_K crystal structure of the e. coli adaptive response protein aidb in the space group p3(2) 0.8859 12 601
ID Description Score Start End Superfamily
af_Q55BV1_144_306_2.40.110.20 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2; 0.8921 147 301 2.40.110.20
af_Q55BV1_307_473_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.8767 310 460 1.20.140.10
af_O53577_149_299_2.40.110.20 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2; 0.8748 145 301 2.40.110.20
af_Q9XWZ2_321_475_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.8739 307 460 1.20.140.10
af_O53577_149_299_2.40.110.20 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2; 0.8641 145 301 2.40.110.20
ID Description Score Start End GO Terms
AF-A0A0S6UM32-F1-model_v4 AidB protein 0.9757 25 600 GO:0003995
AF-A0A7W6TP70-F1-model_v4 Alkylation response protein AidB-like acyl-CoA dehydrogenase 0.9716 18 600 GO:0003995
AF-A0A0S6UM32-F1-model_v4 AidB protein 0.9689 25 600 GO:0003995
AF-A0A7W6TP70-F1-model_v4 Alkylation response protein AidB-like acyl-CoA dehydrogenase 0.9632 18 600 GO:0003995
AF-A0A535EHT3-F1-model_v4 DNA alkylation response protein 0.9481 136 327 GO:0003995

Map