F343233

General Info

Members Datasets Scaffolds Average Seq Length
230 147 460 194

Family's Representative Sequence

Representative Sequence 3300039438|Ga0436360_0159057|Ga0436360_0159057_1769_2497
Length 222
Sequence MSRSAAVRAHDPTSESGQPTRPVCKEKEQRKMPEIMSLSAERRERAGKGGARATRRMGRVPGIIYGGKQDPVLISLEPRELSRAVASRGFLATLVDVKVNGAVERTLPREVQYHPVTDRPLHVDFMRVGADTRVTVTVPVVFINHELSIGLWRGGILNVVRHGIELSCQADSIPDQLVVDLNGLDIGDSVHASAVSFPPGSRPTITDRDFTIASIAELPSAG

Samples

Sample ID Description Type Environment
1 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
74 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
75 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
79 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
80 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
81 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
82 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
94 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
95 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
101 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
126 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
129 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
145 2738543024 Aminobacter sp. AP02 Isolate Unclassified
146 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
147 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.7
Metatranscriptomes 0
Isolates 1.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0.43
Rhizoplane 4.35
Rhizosphere 87.83
Stem 0
Stem Tuber 0
Unclassified 2.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436360_0159057 3300039438 Bacteria 3068
2 Ga0070689_100180796 3300005340 Bacteria 1713
3 Ga0070675_100096462 3300005354 Bacteria 2484
4 Ga0070671_100044725 3300005355 Bacteria 3680
5 Ga0070709_10037839 3300005434 Bacteria 2950
6 Ga0070709_10061510 3300005434 Bacteria 2391
7 Ga0070714_100017921 3300005435 Bacteria 5742
8 Ga0070714_100115651 3300005435 Bacteria 2381
9 Ga0070714_100217832 3300005435 Bacteria 1753
10 Ga0070713_100032306 3300005436 Bacteria 4179
11 Ga0070710_10002630 3300005437 Bacteria 8527
12 Ga0070711_100007561 3300005439 Bacteria 6612
13 Ga0070711_100101618 3300005439 Bacteria 2092
14 Ga0070711_100102755 3300005439 Bacteria 2082
15 Ga0070711_100141747 3300005439 Bacteria 1803
16 Ga0070708_100161343 3300005445 Bacteria 2089
17 Ga0070708_100202369 3300005445 Bacteria 1859
18 Ga0070678_100241632 3300005456 Bacteria 1510
19 Ga0070681_10071984 3300005458 Bacteria 3421
20 Ga0070681_10124004 3300005458 Bacteria 2516
21 Ga0070681_10514622 3300005458 Unclassified 1110
22 Ga0070685_10012343 3300005466 Bacteria 4488
23 Ga0070706_100081328 3300005467 Bacteria 3000
24 Ga0070706_100105533 3300005467 Bacteria 2621
25 Ga0070706_100519316 3300005467 Bacteria 1108
26 Ga0070707_100004884 3300005468 Bacteria 12565
27 Ga0070707_100115765 3300005468 Bacteria 2602
28 Ga0070698_100002776 3300005471 Bacteria 19261
29 Ga0070698_100306511 3300005471 Bacteria 1519
30 Ga0070699_100447059 3300005518 Bacteria 1171
31 Ga0070699_100454405 3300005518 Bacteria 1162
32 Ga0070679_100458580 3300005530 Bacteria 1219
33 Ga0070679_100721500 3300005530 Bacteria 940
34 Ga0068853_100169103 3300005539 Bacteria 1977
35 Ga0070695_100096146 3300005545 Bacteria 1987
36 Ga0070696_100008333 3300005546 Bacteria 6935
37 Ga0070664_100633621 3300005564 Bacteria 993
38 Ga0068854_100257579 3300005578 Bacteria 1396
39 Ga0068856_100077560 3300005614 Bacteria 3292
40 Ga0068863_100906702 3300005841 Bacteria 882
41 Ga0081538_10051882 3300005981 Bacteria 2457
42 Ga0081540_1005349 3300005983 Bacteria 9601
43 Ga0070717_10000240 3300006028 Bacteria 37664
44 Ga0070717_10066623 3300006028 Bacteria 2995
45 Ga0070717_10126828 3300006028 Bacteria 2191
46 Ga0070717_10417945 3300006028 Bacteria 1206
47 Ga0075363_100103236 3300006048 Bacteria 1579
48 Ga0070712_100011282 3300006175 Bacteria 5661
49 Ga0070712_100021257 3300006175 Bacteria 4259
50 Ga0075428_100001918 3300006844 Bacteria 22304
51 Ga0075430_100115781 3300006846 Bacteria 2234
52 Ga0075431_100001712 3300006847 Bacteria 20617
53 Ga0075434_100559741 3300006871 Bacteria 1163
54 Ga0099795_10003515 3300007788 Bacteria 3891
55 Ga0111539_10260030 3300009094 Bacteria 2021
56 Ga0105247_10310036 3300009101 Bacteria 1098
57 Ga0114129_10209438 3300009147 Bacteria 2636
58 Ga0099796_10001572 3300010159 Bacteria 4672
59 Ga0099796_10007444 3300010159 Bacteria 2862
60 Ga0105239_11191390 3300010375 Unclassified 878
61 Ga0157375_10740436 3300013308 Bacteria 1135
62 Ga0157379_10138305 3300014968 Bacteria 2195
63 Ga0213873_10079654 3300021358 Bacteria 915
64 Ga0213872_10029901 3300021361 Bacteria 2499
65 Ga0213872_10056239 3300021361 Bacteria 1782
66 Ga0213875_10000420 3300021388 Bacteria 37291
67 Ga0213875_10001133 3300021388 Bacteria 18309
68 Ga0213871_10106974 3300021441 Bacteria 824
69 Ga0207699_10156387 3300025906 Bacteria 1513
70 Ga0207684_10255381 3300025910 Bacteria 1512
71 Ga0207684_10450002 3300025910 Bacteria 1106
72 Ga0207707_10051251 3300025912 Bacteria 3594
73 Ga0207707_10056759 3300025912 Bacteria 3407
74 Ga0207707_10604660 3300025912 Unclassified 928
75 Ga0207693_10003200 3300025915 Bacteria 14052
76 Ga0207693_10026067 3300025915 Bacteria 4629
77 Ga0207663_10051632 3300025916 Bacteria 2562
78 Ga0207663_10324890 3300025916 Bacteria 1157
79 Ga0207652_10090292 3300025921 Bacteria 2692
80 Ga0207652_10368386 3300025921 Bacteria 1297
81 Ga0207652_10370511 3300025921 Bacteria 1293
82 Ga0207646_10002543 3300025922 Bacteria 21532
83 Ga0207646_10429842 3300025922 Bacteria 1192
84 Ga0207659_10072346 3300025926 Bacteria 2520
85 Ga0207700_10009000 3300025928 Bacteria 6215
86 Ga0207700_10058494 3300025928 Bacteria 2912
87 Ga0207700_10654569 3300025928 Bacteria 937
88 Ga0207664_10056855 3300025929 Bacteria 3108
89 Ga0207664_10361765 3300025929 Bacteria 1286
90 Ga0207664_10402751 3300025929 Bacteria 1217
91 Ga0207644_10182309 3300025931 Bacteria 1646
92 Ga0207644_10731378 3300025931 Bacteria 826
93 Ga0207690_10266224 3300025932 Bacteria 1330
94 Ga0207665_10050584 3300025939 Bacteria 2795
95 Ga0207665_10162768 3300025939 Bacteria 1606
96 Ga0207679_10241879 3300025945 Bacteria 1529
97 Ga0207679_10882307 3300025945 Unclassified 818
98 Ga0207667_10751487 3300025949 Bacteria 974
99 Ga0207640_10392540 3300025981 Bacteria 1128
100 Ga0207639_10031438 3300026041 Bacteria 3902
101 Ga0207702_10024417 3300026078 Bacteria 5016
102 Ga0207676_11033235 3300026095 Bacteria 811
103 Ga0207683_10400370 3300026121 Bacteria 1263
104 Ga0265340_10113691 3300031247 Bacteria 1249
105 Ga0265339_10049795 3300031249 Bacteria 2293
106 Ga0265331_10009778 3300031250 Bacteria 5354
107 Ga0265316_10249149 3300031344 Bacteria 1305
108 Ga0265313_10000597 3300031595 Bacteria 37470
109 Ga0265342_10034919 3300031712 Bacteria 3081
110 Ga0307406_10731004 3300031901 Bacteria 829
111 Ga0373944_0038517 3300035089 Bacteria 1469
112 Ga0373936_0060534 3300035113 Bacteria 1545
113 Ga0373953_0018270 3300035117 Bacteria 2592
114 Ga0373956_0028297 3300035119 Bacteria 2438
115 Ga0373957_0098583 3300035120 Bacteria 1168
116 Ga0373955_0044247 3300035172 Bacteria 2397
117 Ga0373961_0105927 3300035241 Bacteria 916
118 Ga0373931_0016279 3300035691 Bacteria 3658
119 Ga0373935_0284903 3300035692 Bacteria 1164
120 Ga0373927_0145537 3300035695 Bacteria 1551
121 Ga0373933_0022433 3300035724 Bacteria 3595
122 Ga0373937_0041576 3300036401 Bacteria 4192
123 Ga0316582_0312639 3300036647 Bacteria 1080
124 Ga0373925_0048107 3300037068 Bacteria 3177
125 Ga0373925_0183530 3300037068 Bacteria 1657
126 Ga0373925_0331706 3300037068 Bacteria 1232
127 Ga0395900_0238362 3300037418 Bacteria 1826
128 Ga0436364_0103915 3300037853 Bacteria 1695
129 Ga0436364_0591284 3300037853 Bacteria 2164
130 Ga0436364_1114298 3300037853 Bacteria 2694
131 Ga0436364_1159894 3300037853 Bacteria 1650
132 Ga0436364_1230766 3300037853 Bacteria 152032
133 Ga0436364_1534409 3300037853 Bacteria 67186
134 Ga0436365_0787696 3300039437 Bacteria 1043
135 Ga0436365_0879177 3300039437 Bacteria 3244
136 Ga0436365_0885320 3300039437 Bacteria 1693
137 Ga0436365_1088179 3300039437 Bacteria 1000
138 Ga0436360_0596797 3300039438 Bacteria 899
139 Ga0436360_0991455 3300039438 Bacteria 2844
140 Ga0436361_0421501 3300039447 Bacteria 14197
141 Ga0436361_0466531 3300039447 Bacteria 5851
142 Ga0436361_0789823 3300039447 Bacteria 874
143 Ga0436363_0552534 3300039450 Bacteria 1493
144 Ga0436363_1446243 3300039450 Bacteria 3441
145 Ga0436362_0203763 3300039453 Bacteria 1049
146 Ga0436362_0702648 3300039453 Bacteria 6618
147 Ga0436362_0939789 3300039453 Bacteria 2753
148 Ga0436362_0970819 3300039453 Bacteria 931
149 Ga0450905_001060 3300042142 Bacteria 3455
150 Ga0450889_000190 3300042144 Bacteria 6717
151 Ga0466963_0170087 3300044694 Bacteria 1519
152 Ga0495580_0087037 3300046472 Bacteria 2176
153 Ga0495640_0123372 3300046533 Bacteria 1682
154 Ga0495667_0514364 3300046559 Bacteria 749
155 Ga0495672_0046010 3300047320 Bacteria 2606
156 Ga0495686_0000049 3300047472 Bacteria 275004
157 Ga0495602_0231169 3300048088 Bacteria 1389
158 Ga0496104_0000264 3300048907 Bacteria 46250
159 Ga0496104_0066632 3300048907 Bacteria 3419
160 Ga0496105_0006739 3300048908 Bacteria 8831
161 Ga0496109_0069204 3300048912 Bacteria 3237
162 Ga0496109_0186543 3300048912 Bacteria 1948
163 Ga0496110_0009156 3300048913 Bacteria 7996
164 Ga0496110_0207197 3300048913 Bacteria 1782
165 Ga0496111_0035890 3300048914 Bacteria 3545
166 Ga0496113_0022186 3300048916 Bacteria 4486
167 Ga0496113_0031269 3300048916 Bacteria 3862
168 Ga0501032_0000270 3300049569 Bacteria 43721
169 Ga0501036_0358071 3300049572 Bacteria 1218
170 Ga0501036_0534515 3300049572 Bacteria 975
171 Ga0501037_0008519 3300049573 Bacteria 7522
172 Ga0501037_0113689 3300049573 Bacteria 1949
173 Ga0501039_0071152 3300049575 Bacteria 2702
174 Ga0501040_0004037 3300049576 Bacteria 9538
175 Ga0501040_0109862 3300049576 Bacteria 1928
176 Ga0501042_0271543 3300049578 Bacteria 1224
177 Ga0501043_0012576 3300049579 Bacteria 6619
178 Ga0501043_0321474 3300049579 Bacteria 1180
179 Ga0501047_0009721 3300049581 Bacteria 9095
180 Ga0501047_0015361 3300049581 Bacteria 7295
181 Ga0501047_0452477 3300049581 Bacteria 1113
182 Ga0501047_0734110 3300049581 Bacteria 804
183 Ga0501048_0187605 3300049582 Bacteria 1465
184 Ga0501067_0000086 3300049583 Bacteria 54161
185 Ga0501067_0020925 3300049583 Bacteria 3620
186 Ga0501067_0072750 3300049583 Bacteria 1904
187 Ga0501068_0000729 3300049584 Bacteria 16847
188 Ga0501068_0032737 3300049584 Bacteria 3092
189 Ga0501069_0169836 3300049585 Bacteria 1258
190 Ga0501071_0025116 3300049587 Bacteria 4173
191 Ga0501071_0072822 3300049587 Bacteria 2506
192 Ga0501071_0699773 3300049587 Bacteria 780
193 Ga0501072_0015928 3300049588 Bacteria 5764
194 Ga0501072_0373239 3300049588 Bacteria 1132
195 Ga0501073_0000005 3300049589 Bacteria 237180
196 Ga0501073_0008559 3300049589 Bacteria 7586
197 Ga0501074_0173486 3300049590 Bacteria 1539
198 Ga0501075_0306744 3300049591 Bacteria 1210
199 Ga0501076_0437568 3300049592 Bacteria 1076
200 Ga0501076_0531426 3300049592 Unclassified 970
201 Ga0501077_0000078 3300049593 Bacteria 48455
202 Ga0501077_0042223 3300049593 Bacteria 2900
203 Ga0501077_0218708 3300049593 Bacteria 1211
204 Ga0501079_0028066 3300049741 Bacteria 4318
205 Ga0501080_0002604 3300049742 Bacteria 15794
206 Ga0501080_0009262 3300049742 Bacteria 8978
207 Ga0501080_0024925 3300049742 Bacteria 5548
208 Ga0501081_0007164 3300049743 Bacteria 7251
209 Ga0501081_0614590 3300049743 Bacteria 814
210 Ga0501083_0049755 3300049744 Bacteria 2824
211 Ga0501035_0337768 3300049822 Bacteria 1263
212 Ga0501044_0002123 3300049823 Bacteria 22747
213 Ga0501044_0083638 3300049823 Bacteria 3227
214 Ga0501045_0278303 3300049824 Bacteria 1246
215 nmdc:mga05p37_41686_c1 3300050507 Bacteria 3949
216 nmdc:mga06r32_12202_c1 3300050510 Bacteria 7749
217 nmdc:mga08y16_98831_c1 3300050511 Bacteria 3039
218 nmdc:mga08x19_114764_c1 3300050514 Bacteria 1800
219 Ga0495601_0555572 3300053077 Bacteria 738
220 Ga0495619_0025919 3300053085 Bacteria 3769
221 Ga0500595_005572 3300053119 Bacteria 5483
222 Ga0501084_0475551 3300054114 Bacteria 1056
223 Ga0501082_0005598 3300060353 Bacteria 10910
224 Ga0501082_0013144 3300060353 Bacteria 7118
225 Ga0501082_0089600 3300060353 Bacteria 2656
226 Ga0530510_0050000 3300061734 Bacteria 3019
227 Ga0530510_0108335 3300061734 Bacteria 2034
228 2739310089 2738543024 Bacteria 5603683
229 2885430282 2885429604 Bacteria 3642894
230 8002289332 8002285264 Bacteria 6717907
231 Ga0436360_0159057
232 Ga0070689_100180796
233 Ga0070675_100096462
234 Ga0070671_100044725
235 Ga0070709_10037839
236 Ga0070709_10061510
237 Ga0070714_100017921
238 Ga0070714_100115651
239 Ga0070714_100217832
240 Ga0070713_100032306
241 Ga0070710_10002630
242 Ga0070711_100007561
243 Ga0070711_100101618
244 Ga0070711_100102755
245 Ga0070711_100141747
246 Ga0070708_100161343
247 Ga0070708_100202369
248 Ga0070678_100241632
249 Ga0070681_10071984
250 Ga0070681_10124004
251 Ga0070681_10514622
252 Ga0070685_10012343
253 Ga0070706_100081328
254 Ga0070706_100105533
255 Ga0070706_100519316
256 Ga0070707_100004884
257 Ga0070707_100115765
258 Ga0070698_100002776
259 Ga0070698_100306511
260 Ga0070699_100447059
261 Ga0070699_100454405
262 Ga0070679_100458580
263 Ga0070679_100721500
264 Ga0068853_100169103
265 Ga0070695_100096146
266 Ga0070696_100008333
267 Ga0070664_100633621
268 Ga0068854_100257579
269 Ga0068856_100077560
270 Ga0068863_100906702
271 Ga0081538_10051882
272 Ga0081540_1005349
273 Ga0070717_10000240
274 Ga0070717_10066623
275 Ga0070717_10126828
276 Ga0070717_10417945
277 Ga0075363_100103236
278 Ga0070712_100011282
279 Ga0070712_100021257
280 Ga0075428_100001918
281 Ga0075430_100115781
282 Ga0075431_100001712
283 Ga0075434_100559741
284 Ga0099795_10003515
285 Ga0111539_10260030
286 Ga0105247_10310036
287 Ga0114129_10209438
288 Ga0099796_10001572
289 Ga0099796_10007444
290 Ga0105239_11191390
291 Ga0157375_10740436
292 Ga0157379_10138305
293 Ga0213873_10079654
294 Ga0213872_10029901
295 Ga0213872_10056239
296 Ga0213875_10000420
297 Ga0213875_10001133
298 Ga0213871_10106974
299 Ga0207699_10156387
300 Ga0207684_10255381
301 Ga0207684_10450002
302 Ga0207707_10051251
303 Ga0207707_10056759
304 Ga0207707_10604660
305 Ga0207693_10003200
306 Ga0207693_10026067
307 Ga0207663_10051632
308 Ga0207663_10324890
309 Ga0207652_10090292
310 Ga0207652_10368386
311 Ga0207652_10370511
312 Ga0207646_10002543
313 Ga0207646_10429842
314 Ga0207659_10072346
315 Ga0207700_10009000
316 Ga0207700_10058494
317 Ga0207700_10654569
318 Ga0207664_10056855
319 Ga0207664_10361765
320 Ga0207664_10402751
321 Ga0207644_10182309
322 Ga0207644_10731378
323 Ga0207690_10266224
324 Ga0207665_10050584
325 Ga0207665_10162768
326 Ga0207679_10241879
327 Ga0207679_10882307
328 Ga0207667_10751487
329 Ga0207640_10392540
330 Ga0207639_10031438
331 Ga0207702_10024417
332 Ga0207676_11033235
333 Ga0207683_10400370
334 Ga0265340_10113691
335 Ga0265339_10049795
336 Ga0265331_10009778
337 Ga0265316_10249149
338 Ga0265313_10000597
339 Ga0265342_10034919
340 Ga0307406_10731004
341 Ga0373944_0038517
342 Ga0373936_0060534
343 Ga0373953_0018270
344 Ga0373956_0028297
345 Ga0373957_0098583
346 Ga0373955_0044247
347 Ga0373961_0105927
348 Ga0373931_0016279
349 Ga0373935_0284903
350 Ga0373927_0145537
351 Ga0373933_0022433
352 Ga0373937_0041576
353 Ga0316582_0312639
354 Ga0373925_0048107
355 Ga0373925_0183530
356 Ga0373925_0331706
357 Ga0395900_0238362
358 Ga0436364_0103915
359 Ga0436364_0591284
360 Ga0436364_1114298
361 Ga0436364_1159894
362 Ga0436364_1230766
363 Ga0436364_1534409
364 Ga0436365_0787696
365 Ga0436365_0879177
366 Ga0436365_0885320
367 Ga0436365_1088179
368 Ga0436360_0596797
369 Ga0436360_0991455
370 Ga0436361_0421501
371 Ga0436361_0466531
372 Ga0436361_0789823
373 Ga0436363_0552534
374 Ga0436363_1446243
375 Ga0436362_0203763
376 Ga0436362_0702648
377 Ga0436362_0939789
378 Ga0436362_0970819
379 Ga0450905_001060
380 Ga0450889_000190
381 Ga0466963_0170087
382 Ga0495580_0087037
383 Ga0495640_0123372
384 Ga0495667_0514364
385 Ga0495672_0046010
386 Ga0495686_0000049
387 Ga0495602_0231169
388 Ga0496104_0000264
389 Ga0496104_0066632
390 Ga0496105_0006739
391 Ga0496109_0069204
392 Ga0496109_0186543
393 Ga0496110_0009156
394 Ga0496110_0207197
395 Ga0496111_0035890
396 Ga0496113_0022186
397 Ga0496113_0031269
398 Ga0501032_0000270
399 Ga0501036_0358071
400 Ga0501036_0534515
401 Ga0501037_0008519
402 Ga0501037_0113689
403 Ga0501039_0071152
404 Ga0501040_0004037
405 Ga0501040_0109862
406 Ga0501042_0271543
407 Ga0501043_0012576
408 Ga0501043_0321474
409 Ga0501047_0009721
410 Ga0501047_0015361
411 Ga0501047_0452477
412 Ga0501047_0734110
413 Ga0501048_0187605
414 Ga0501067_0000086
415 Ga0501067_0020925
416 Ga0501067_0072750
417 Ga0501068_0000729
418 Ga0501068_0032737
419 Ga0501069_0169836
420 Ga0501071_0025116
421 Ga0501071_0072822
422 Ga0501071_0699773
423 Ga0501072_0015928
424 Ga0501072_0373239
425 Ga0501073_0000005
426 Ga0501073_0008559
427 Ga0501074_0173486
428 Ga0501075_0306744
429 Ga0501076_0437568
430 Ga0501076_0531426
431 Ga0501077_0000078
432 Ga0501077_0042223
433 Ga0501077_0218708
434 Ga0501079_0028066
435 Ga0501080_0002604
436 Ga0501080_0009262
437 Ga0501080_0024925
438 Ga0501081_0007164
439 Ga0501081_0614590
440 Ga0501083_0049755
441 Ga0501035_0337768
442 Ga0501044_0002123
443 Ga0501044_0083638
444 Ga0501045_0278303
445 nmdc:mga05p37_41686_c1
446 nmdc:mga06r32_12202_c1
447 nmdc:mga08y16_98831_c1
448 nmdc:mga08x19_114764_c1
449 Ga0495601_0555572
450 Ga0495619_0025919
451 Ga0500595_005572
452 Ga0501084_0475551
453 Ga0501082_0005598
454 Ga0501082_0013144
455 Ga0501082_0089600
456 Ga0530510_0050000
457 Ga0530510_0108335
458 2739310089
459 2885430282
460 8002289332

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14693

Ribosomal_TL5_C

Ribosomal protein TL5, C-terminal domain

133

218

0.97

PF01386

Ribosomal_L25p

Ribosomal L25p family

38

125

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7unw-assembly1.cif.gz_X pseudomonas aeruginosa 70s ribosome initiation complex bound to if2-gdpcp (structure ii-b) 0.942 5 186
6ysi-assembly1.cif.gz_R acinetobacter baumannii ribosome-tigecycline complex - 50s subunit 0.935 5 97
6spg-assembly1.cif.gz_V pseudomonas aeruginosa 70s ribosome from a clinical isolate 0.9326 5 186
7m4v-assembly1.cif.gz_U a. baumannii ribosome-eravacycline complex: 50s 0.9305 5 97
7pkt-assembly1.cif.gz_t large subunit of the chlamydomonas reinhardtii mitoribosome 0.921 8 183
ID Description Score Start End Superfamily
af_I1K1R5_150_228_2.170.120.20 Mainly Beta;Beta Complex;RNA Polymerase Alpha Subunit; Chain A, domain 2;Ribosomal protein L25, C-terminal domain 0.9573 101 173 2.170.120.20
af_K7MM89_88_176_2.170.120.20 Mainly Beta;Beta Complex;RNA Polymerase Alpha Subunit; Chain A, domain 2;Ribosomal protein L25, C-terminal domain 0.9545 100 185 2.170.120.20
af_F4JPA3_178_267_2.170.120.20 Mainly Beta;Beta Complex;RNA Polymerase Alpha Subunit; Chain A, domain 2;Ribosomal protein L25, C-terminal domain 0.9458 103 185 2.170.120.20
af_Q2G0S0_95_176_2.170.120.20 Mainly Beta;Beta Complex;RNA Polymerase Alpha Subunit; Chain A, domain 2;Ribosomal protein L25, C-terminal domain 0.9369 98 181 2.170.120.20
af_Q54VK2_46_139_2.40.240.10 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Ribosomal Protein L25; Chain P 0.9234 7 97 2.40.240.10
ID Description Score Start End GO Terms
AF-A0A6M1U782-F1-model_v4 Large ribosomal subunit protein bL25 beta domain-containing protein 0.9893 101 186 GO:0006412
GO:0008097
GO:0022625
AF-A0A087NIL9-F1-model_v4 50S ribosomal protein L25 0.9844 37 186 GO:0003735
GO:0006412
GO:0008097
GO:0022625
AF-A0A436FSE5-F1-model_v4 50S ribosomal protein L25 0.982 3 180 GO:0003735
GO:0006412
GO:0008097
GO:0022625
AF-A0A7C9GH67-F1-model_v4 Large ribosomal subunit protein bL25 (General stress protein CTC) 0.9808 1 186 GO:0003735
GO:0006412
GO:0008097
GO:0022625
AF-A0A2P7SE57-F1-model_v4 Large ribosomal subunit protein bL25 (General stress protein CTC) 0.9807 1 185 GO:0003735
GO:0006412
GO:0008097
GO:0022625

Map