F343261

General Info

Members Datasets Scaffolds Average Seq Length
230 163 460 436

Family's Representative Sequence

Representative Sequence 3300042012|Ga0439455_0003414|Ga0439455_0003414_79_1425
Length 448
Sequence VYALVDVNNMYVSCERVFRPSLNGRPVVVLSNNDGACIARSNEAKDLGVRMAQPWFEVRHLAREAGLIALSANFELYGDMSSRMMSLAAEYAPRQEIYSIDECFLDFDGMPGDLAATGRELRRKVLNWTGLPTSVGFGATKTLAKLANHVAKTADRKPGSYPRELAQVCNFGELSAEALAAVMGSTAVWGIGRKTTLRLKEGGIRTVLDLVRADPATLGRVFSVVIERTMRELRGTPCLGVEDAPAANQQIMCSRSFGTPVVDLPTLTEVVSQFATQVARKLREQGSVAGAVNVFINTSPFRRGDRQHAPSATLPLGRPSADTRMLASAAVQALRSIFKPGFNYVKAGVMLVELQQQAPQRSEMQRGEPAPLQATLDLFDPETPADAPQRSRAELMNTLDALNQRFGRNAVTVASAARRAGPSTHASRQDRRSPRYTTRLDEIVTARA

Samples

Sample ID Description Type Environment
1 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
95 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
103 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
107 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
108 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
109 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
110 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
111 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
112 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
113 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
136 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
137 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
138 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
139 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
140 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
141 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
142 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
143 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
144 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
145 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
146 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
147 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
148 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
149 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
150 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
151 2547132374 Acidovorax radicis N35 Isolate Unclassified
152 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
153 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
154 2643221596 Acidovorax sp. Root70 Isolate Unclassified
155 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
156 2643221652 Acidovorax sp. Root402 Isolate Unclassified
157 2643221717 Acidovorax sp. Root267 Isolate Unclassified
158 2738543012 Acidovorax sp. CF301 Isolate Unclassified
159 2773857673 Pseudomonas sp. 443 Isolate Unclassified
160 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
161 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
162 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
163 8055693939 Hafnia alvei A23BA Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.17
Metatranscriptomes 0
Isolates 7.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.17
Nodule 0.87
Rhizoplane 1.3
Rhizosphere 70.43
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439455_0003414 3300042012 Bacteria 3033
2 JGI25153J46596_10000491 3300003215 Bacteria 25259
3 Ga0055530_10000806 3300003791 Bacteria 26041
4 Ga0055540_1000001 3300003792 Bacteria 466834
5 Ga0055531_10003184 3300003794 Bacteria 10548
6 Ga0065165_1000922 3300005262 Bacteria 37708
7 Ga0065712_10100788 3300005290 Bacteria 2045
8 Ga0065715_10101111 3300005293 Bacteria 3235
9 Ga0065715_10114002 3300005293 Bacteria 2467
10 Ga0070690_100026504 3300005330 Bacteria 3576
11 Ga0070670_100001044 3300005331 Bacteria 21956
12 Ga0070670_100191498 3300005331 Bacteria 1776
13 Ga0070677_10000359 3300005333 Bacteria 15968
14 Ga0070666_10010379 3300005335 Bacteria 5824
15 Ga0070689_100038901 3300005340 Bacteria 3640
16 Ga0070668_100036658 3300005347 Bacteria 3743
17 Ga0070669_100117708 3300005353 Bacteria 2023
18 Ga0070675_100002967 3300005354 Bacteria 12811
19 Ga0070671_100000832 3300005355 Bacteria 22413
20 Ga0070671_100008317 3300005355 Bacteria 8306
21 Ga0070674_100000645 3300005356 Bacteria 17585
22 Ga0070674_100026359 3300005356 Bacteria 3795
23 Ga0070673_100002122 3300005364 Bacteria 12002
24 Ga0070673_100033263 3300005364 Bacteria 3891
25 Ga0070667_100013322 3300005367 Bacteria 6793
26 Ga0070678_100007832 3300005456 Bacteria 6356
27 Ga0070678_100009753 3300005456 Bacteria 5835
28 Ga0070662_100061741 3300005457 Bacteria 2737
29 Ga0068867_100032944 3300005459 Bacteria 3749
30 Ga0068867_100101422 3300005459 Bacteria 2199
31 Ga0070672_100015136 3300005543 Bacteria 5484
32 Ga0070672_100037189 3300005543 Bacteria 3712
33 Ga0070665_100124270 3300005548 Bacteria 2582
34 Ga0068855_100022182 3300005563 Bacteria 7608
35 Ga0068859_100051961 3300005617 Bacteria 4121
36 Ga0068859_100136266 3300005617 Bacteria 2528
37 Ga0068864_100008717 3300005618 Bacteria 8364
38 Ga0068864_100108061 3300005618 Bacteria 2475
39 Ga0068861_100017511 3300005719 Bacteria 5090
40 Ga0068863_100025102 3300005841 Bacteria 5684
41 Ga0068858_100044156 3300005842 Bacteria 4132
42 Ga0068860_100007886 3300005843 Bacteria 10630
43 Ga0068860_100045147 3300005843 Bacteria 4201
44 Ga0068860_100210858 3300005843 Bacteria 1884
45 Ga0068862_100049909 3300005844 Bacteria 3575
46 Ga0075366_10006489 3300006195 Bacteria 6413
47 Ga0075366_10044005 3300006195 Bacteria 2646
48 Ga0097621_100010129 3300006237 Bacteria 6881
49 Ga0097621_100034016 3300006237 Bacteria 4063
50 Ga0068871_100002846 3300006358 Bacteria 11851
51 Ga0068865_100005632 3300006881 Bacteria 7603
52 Ga0097620_100051962 3300006931 Bacteria 4121
53 Ga0097620_100136266 3300006931 Bacteria 2528
54 Ga0079104_1000173 3300006946 Bacteria 91782
55 Ga0105251_10000080 3300009011 Bacteria 91177
56 Ga0105245_10009276 3300009098 Bacteria 8580
57 Ga0114129_10062056 3300009147 Bacteria 5222
58 Ga0105248_10012549 3300009177 Bacteria 9345
59 Ga0105246_10140648 3300011119 Bacteria 1814
60 Ga0157374_10023024 3300013296 Bacteria 5565
61 Ga0163162_10005184 3300013306 Bacteria 12570
62 Ga0163162_10016157 3300013306 Bacteria 7298
63 Ga0163162_10076865 3300013306 Bacteria 3401
64 Ga0157375_10004957 3300013308 Bacteria 11581
65 Ga0157375_10056117 3300013308 Bacteria 3887
66 Ga0157375_10071851 3300013308 Bacteria 3475
67 Ga0157375_10093227 3300013308 Bacteria 3077
68 Ga0163163_10002987 3300014325 Bacteria 14313
69 Ga0157380_10008973 3300014326 Bacteria 7144
70 Ga0157380_10019787 3300014326 Bacteria 5022
71 Ga0157379_10013396 3300014968 Bacteria 7182
72 Ga0157379_10037624 3300014968 Bacteria 4316
73 Ga0157376_10221616 3300014969 Bacteria 1752
74 Ga0163161_10012952 3300017792 Bacteria 5794
75 Ga0163161_10041486 3300017792 Bacteria 3306
76 Ga0163161_10045001 3300017792 Bacteria 3181
77 Ga0163161_10074943 3300017792 Bacteria 2482
78 Ga0209758_1000045 3300025297 Bacteria 369174
79 Ga0209050_1000145 3300025298 Bacteria 168151
80 Ga0209051_1000018 3300025303 Bacteria 527061
81 Ga0209257_1000084 3300025304 Bacteria 291502
82 Ga0207697_10002685 3300025315 Bacteria 9097
83 Ga0207713_1000179 3300025735 Bacteria 91187
84 Ga0207682_10002284 3300025893 Bacteria 8639
85 Ga0207688_10039550 3300025901 Bacteria 2619
86 Ga0207680_10005592 3300025903 Bacteria 6013
87 Ga0207643_10028286 3300025908 Bacteria 3112
88 Ga0207654_10028164 3300025911 Bacteria 3061
89 Ga0207649_10030002 3300025920 Bacteria 3216
90 Ga0207681_10001929 3300025923 Bacteria 13285
91 Ga0207650_10000914 3300025925 Bacteria 22270
92 Ga0207659_10007715 3300025926 Bacteria 6643
93 Ga0207659_10087838 3300025926 Bacteria 2315
94 Ga0207644_10001511 3300025931 Bacteria 15000
95 Ga0207644_10002629 3300025931 Bacteria 11568
96 Ga0207706_10033955 3300025933 Bacteria 4541
97 Ga0207670_10019403 3300025936 Bacteria 4153
98 Ga0207669_10000404 3300025937 Bacteria 18994
99 Ga0207704_10012703 3300025938 Bacteria 4185
100 Ga0207691_10040356 3300025940 Bacteria 4312
101 Ga0207691_10056298 3300025940 Bacteria 3582
102 Ga0207711_10017827 3300025941 Bacteria 5899
103 Ga0207679_10081860 3300025945 Bacteria 2470
104 Ga0207667_10002591 3300025949 Bacteria 22450
105 Ga0207651_10076445 3300025960 Bacteria 2393
106 Ga0207712_10027223 3300025961 Bacteria 3816
107 Ga0207640_10064910 3300025981 Bacteria 2434
108 Ga0207658_10012654 3300025986 Bacteria 5763
109 Ga0207703_10040520 3300026035 Bacteria 3727
110 Ga0207678_10151783 3300026067 Bacteria 1978
111 Ga0207641_10278523 3300026088 Bacteria 1572
112 Ga0207648_10001114 3300026089 Bacteria 30167
113 Ga0207648_10009154 3300026089 Bacteria 9517
114 Ga0207648_10051554 3300026089 Bacteria 3596
115 Ga0207648_10054320 3300026089 Bacteria 3499
116 Ga0207676_10027379 3300026095 Bacteria 4245
117 Ga0207676_10049542 3300026095 Bacteria 3268
118 Ga0207675_100003692 3300026118 Bacteria 14906
119 Ga0207683_10051796 3300026121 Bacteria 3596
120 Ga0209281_1000292 3300027111 Bacteria 91706
121 Ga0268265_10082961 3300028380 Bacteria 2536
122 Ga0268264_10008053 3300028381 Bacteria 8764
123 Ga0268264_10043768 3300028381 Bacteria 3712
124 Ga0307515_10000030 3300028794 Bacteria 364482
125 Ga0307515_10003785 3300028794 Bacteria 31674
126 Ga0307515_10005553 3300028794 Bacteria 25532
127 Ga0307515_10014344 3300028794 Bacteria 14706
128 Ga0307515_10027057 3300028794 Bacteria 9830
129 Ga0307515_10066808 3300028794 Bacteria 4972
130 Ga0307509_10027807 3300031507 Bacteria 6290
131 Ga0307509_10046448 3300031507 Bacteria 4675
132 Ga0307408_100000048 3300031548 Bacteria 165579
133 Ga0307408_100000356 3300031548 Bacteria 42634
134 Ga0307508_10000555 3300031616 Bacteria 44419
135 Ga0307508_10001752 3300031616 Bacteria 24086
136 Ga0307508_10004807 3300031616 Bacteria 13028
137 Ga0307508_10040374 3300031616 Plasmid 4189
138 Ga0307516_10000018 3300031730 Bacteria 200845
139 Ga0307516_10000847 3300031730 Bacteria 41978
140 Ga0307516_10020315 3300031730 Bacteria 6861
141 Ga0307516_10028479 3300031730 Bacteria 5652
142 Ga0307516_10092577 3300031730 Bacteria 2850
143 Ga0307413_10079822 3300031824 Bacteria 2093
144 Ga0307410_10025176 3300031852 Bacteria 3729
145 Ga0307406_10000262 3300031901 Bacteria 31787
146 Ga0307406_10000583 3300031901 Bacteria 20994
147 Ga0307412_10035226 3300031911 Bacteria 3196
148 Ga0307411_10058628 3300032005 Bacteria 2549
149 Ga0307411_10209655 3300032005 Bacteria 1503
150 Ga0307415_100069753 3300032126 Bacteria 2466
151 Ga0307507_10033330 3300033179 Bacteria 5349
152 Ga0307510_10002601 3300033180 Bacteria 20609
153 Ga0307510_10018550 3300033180 Bacteria 8186
154 Ga0307510_10025139 3300033180 Bacteria 6874
155 Ga0373935_0098436 3300035692 Bacteria 1925
156 Ga0373937_0074582 3300036401 Bacteria 3131
157 Ga0373937_0078204 3300036401 Bacteria 3057
158 Ga0439438_000045 3300041405 Bacteria 59966
159 Ga0451789_0170371 3300041443 Bacteria 2187
160 Ga0451793_1590625 3300041452 Bacteria 2967
161 Ga0451853_1703961 3300041512 Bacteria 1464
162 Ga0450919_001926 3300042121 Bacteria 2696
163 Ga0450903_000080 3300042138 Bacteria 19827
164 Ga0439464_0034337 3300042439 Bacteria 1430
165 Ga0450918_000298 3300042531 Bacteria 11141
166 Ga0451577_0006234 3300042876 Bacteria 11959
167 Ga0466972_0057382 3300044658 Bacteria 1870
168 Ga0453684_0000691 3300044712 Bacteria 120087
169 Ga0453684_0012348 3300044712 Bacteria 14119
170 Ga0453684_0046501 3300044712 Bacteria 5771
171 Ga0453684_0089193 3300044712 Bacteria 3815
172 Ga0466959_0000067 3300045049 Bacteria 73663
173 Ga0495592_0000879 3300046454 Bacteria 20824
174 Ga0495650_0003862 3300046471 Bacteria 10623
175 Ga0495610_0027065 3300046512 Bacteria 3054
176 Ga0495632_0002389 3300046519 Bacteria 14336
177 Ga0495597_0027251 3300046542 Bacteria 2621
178 Ga0495625_0006254 3300046660 Bacteria 10664
179 Ga0495625_0072073 3300046660 Unclassified 2423
180 Ga0495647_0003078 3300046681 Bacteria 5328
181 Ga0495658_0049618 3300046683 Bacteria 2371
182 Ga0495649_0003509 3300046694 Bacteria 10559
183 Ga0495680_0021938 3300047322 Bacteria 5336
184 Ga0495687_000138 3300047443 Bacteria 110840
185 Ga0495684_0026658 3300047471 Bacteria 4441
186 Ga0495686_0002242 3300047472 Bacteria 18646
187 Ga0496110_0264128 3300048913 Bacteria 1567
188 Ga0496117_0045565 3300048920 Bacteria 3166
189 Ga0496117_0119715 3300048920 Bacteria 1620
190 Ga0496124_0000518 3300048927 Bacteria 65917
191 Ga0496126_0033436 3300048929 Bacteria 4838
192 Ga0501292_001022 3300049515 Bacteria 3416
193 Ga0501282_000088 3300049778 Bacteria 10557
194 Ga0501282_002227 3300049778 Bacteria 2127
195 Ga0501226_000456 3300049853 Bacteria 5750
196 nmdc:mga0k408_16711_c1 3300050493 Bacteria 4077
197 nmdc:mga0k408_68255_c1 3300050493 Bacteria 2074
198 Ga0500646_0005324 3300053090 Bacteria 3253
199 Ga0500651_0000163 3300053093 Bacteria 42953
200 Ga0500650_0002304 3300053098 Bacteria 6233
201 Ga0500562_004567 3300053108 Bacteria 3497
202 Ga0500594_0000552 3300053118 Bacteria 8092
203 Ga0500628_000242 3300053129 Bacteria 10497
204 Ga0500642_0020052 3300053130 Bacteria 2621
205 Ga0500652_000348 3300053131 Bacteria 16668
206 Ga0500559_0001128 3300053136 Bacteria 16079
207 Ga0500577_0015901 3300053142 Bacteria 2361
208 Ga0500604_0003347 3300053151 Bacteria 4310
209 Ga0500622_0000080 3300053156 Bacteria 102519
210 Ga0500622_0002537 3300053156 Bacteria 13113
211 Ga0500622_0004122 3300053156 Bacteria 9303
212 Ga0500622_0026774 3300053156 Bacteria 3041
213 2548501145 2547132374 Bacteria 5530232
214 2587730122 2585428057 Bacteria 6737412
215 2587736236 2585428058 Bacteria 6853932
216 2643992329 2643221596 Bacteria 5006805
217 2644243982 2643221644 Bacteria 6865017
218 2644292228 2643221652 Bacteria 5140275
219 2644292706 2643221652 Bacteria 5140275
220 2644294465 2643221652 Bacteria 5140275
221 2644645762 2643221717 Bacteria 5676132
222 2739244210 2738543012 Bacteria 7115078
223 2774137857 2773857673 Bacteria 6513460
224 2904479814 2904479285 Bacteria 5073931
225 2904479893 2904479285 Bacteria 5073931
226 2904480695 2904479285 Bacteria 5073931
227 2904482354 2904479285 Bacteria 5073931
228 2910251121 2910245624 Bacteria 6935613
229 2990713803 2990710928 Bacteria 5002431
230 8055698446 8055693939 Bacteria 4772047
231 Ga0439455_0003414
232 JGI25153J46596_10000491
233 Ga0055530_10000806
234 Ga0055540_1000001
235 Ga0055531_10003184
236 Ga0065165_1000922
237 Ga0065712_10100788
238 Ga0065715_10101111
239 Ga0065715_10114002
240 Ga0070690_100026504
241 Ga0070670_100001044
242 Ga0070670_100191498
243 Ga0070677_10000359
244 Ga0070666_10010379
245 Ga0070689_100038901
246 Ga0070668_100036658
247 Ga0070669_100117708
248 Ga0070675_100002967
249 Ga0070671_100000832
250 Ga0070671_100008317
251 Ga0070674_100000645
252 Ga0070674_100026359
253 Ga0070673_100002122
254 Ga0070673_100033263
255 Ga0070667_100013322
256 Ga0070678_100007832
257 Ga0070678_100009753
258 Ga0070662_100061741
259 Ga0068867_100032944
260 Ga0068867_100101422
261 Ga0070672_100015136
262 Ga0070672_100037189
263 Ga0070665_100124270
264 Ga0068855_100022182
265 Ga0068859_100051961
266 Ga0068859_100136266
267 Ga0068864_100008717
268 Ga0068864_100108061
269 Ga0068861_100017511
270 Ga0068863_100025102
271 Ga0068858_100044156
272 Ga0068860_100007886
273 Ga0068860_100045147
274 Ga0068860_100210858
275 Ga0068862_100049909
276 Ga0075366_10006489
277 Ga0075366_10044005
278 Ga0097621_100010129
279 Ga0097621_100034016
280 Ga0068871_100002846
281 Ga0068865_100005632
282 Ga0097620_100051962
283 Ga0097620_100136266
284 Ga0079104_1000173
285 Ga0105251_10000080
286 Ga0105245_10009276
287 Ga0114129_10062056
288 Ga0105248_10012549
289 Ga0105246_10140648
290 Ga0157374_10023024
291 Ga0163162_10005184
292 Ga0163162_10016157
293 Ga0163162_10076865
294 Ga0157375_10004957
295 Ga0157375_10056117
296 Ga0157375_10071851
297 Ga0157375_10093227
298 Ga0163163_10002987
299 Ga0157380_10008973
300 Ga0157380_10019787
301 Ga0157379_10013396
302 Ga0157379_10037624
303 Ga0157376_10221616
304 Ga0163161_10012952
305 Ga0163161_10041486
306 Ga0163161_10045001
307 Ga0163161_10074943
308 Ga0209758_1000045
309 Ga0209050_1000145
310 Ga0209051_1000018
311 Ga0209257_1000084
312 Ga0207697_10002685
313 Ga0207713_1000179
314 Ga0207682_10002284
315 Ga0207688_10039550
316 Ga0207680_10005592
317 Ga0207643_10028286
318 Ga0207654_10028164
319 Ga0207649_10030002
320 Ga0207681_10001929
321 Ga0207650_10000914
322 Ga0207659_10007715
323 Ga0207659_10087838
324 Ga0207644_10001511
325 Ga0207644_10002629
326 Ga0207706_10033955
327 Ga0207670_10019403
328 Ga0207669_10000404
329 Ga0207704_10012703
330 Ga0207691_10040356
331 Ga0207691_10056298
332 Ga0207711_10017827
333 Ga0207679_10081860
334 Ga0207667_10002591
335 Ga0207651_10076445
336 Ga0207712_10027223
337 Ga0207640_10064910
338 Ga0207658_10012654
339 Ga0207703_10040520
340 Ga0207678_10151783
341 Ga0207641_10278523
342 Ga0207648_10001114
343 Ga0207648_10009154
344 Ga0207648_10051554
345 Ga0207648_10054320
346 Ga0207676_10027379
347 Ga0207676_10049542
348 Ga0207675_100003692
349 Ga0207683_10051796
350 Ga0209281_1000292
351 Ga0268265_10082961
352 Ga0268264_10008053
353 Ga0268264_10043768
354 Ga0307515_10000030
355 Ga0307515_10003785
356 Ga0307515_10005553
357 Ga0307515_10014344
358 Ga0307515_10027057
359 Ga0307515_10066808
360 Ga0307509_10027807
361 Ga0307509_10046448
362 Ga0307408_100000048
363 Ga0307408_100000356
364 Ga0307508_10000555
365 Ga0307508_10001752
366 Ga0307508_10004807
367 Ga0307508_10040374
368 Ga0307516_10000018
369 Ga0307516_10000847
370 Ga0307516_10020315
371 Ga0307516_10028479
372 Ga0307516_10092577
373 Ga0307413_10079822
374 Ga0307410_10025176
375 Ga0307406_10000262
376 Ga0307406_10000583
377 Ga0307412_10035226
378 Ga0307411_10058628
379 Ga0307411_10209655
380 Ga0307415_100069753
381 Ga0307507_10033330
382 Ga0307510_10002601
383 Ga0307510_10018550
384 Ga0307510_10025139
385 Ga0373935_0098436
386 Ga0373937_0074582
387 Ga0373937_0078204
388 Ga0439438_000045
389 Ga0451789_0170371
390 Ga0451793_1590625
391 Ga0451853_1703961
392 Ga0450919_001926
393 Ga0450903_000080
394 Ga0439464_0034337
395 Ga0450918_000298
396 Ga0451577_0006234
397 Ga0466972_0057382
398 Ga0453684_0000691
399 Ga0453684_0012348
400 Ga0453684_0046501
401 Ga0453684_0089193
402 Ga0466959_0000067
403 Ga0495592_0000879
404 Ga0495650_0003862
405 Ga0495610_0027065
406 Ga0495632_0002389
407 Ga0495597_0027251
408 Ga0495625_0006254
409 Ga0495625_0072073
410 Ga0495647_0003078
411 Ga0495658_0049618
412 Ga0495649_0003509
413 Ga0495680_0021938
414 Ga0495687_000138
415 Ga0495684_0026658
416 Ga0495686_0002242
417 Ga0496110_0264128
418 Ga0496117_0045565
419 Ga0496117_0119715
420 Ga0496124_0000518
421 Ga0496126_0033436
422 Ga0501292_001022
423 Ga0501282_000088
424 Ga0501282_002227
425 Ga0501226_000456
426 nmdc:mga0k408_16711_c1
427 nmdc:mga0k408_68255_c1
428 Ga0500646_0005324
429 Ga0500651_0000163
430 Ga0500650_0002304
431 Ga0500562_004567
432 Ga0500594_0000552
433 Ga0500628_000242
434 Ga0500642_0020052
435 Ga0500652_000348
436 Ga0500559_0001128
437 Ga0500577_0015901
438 Ga0500604_0003347
439 Ga0500622_0000080
440 Ga0500622_0002537
441 Ga0500622_0004122
442 Ga0500622_0026774
443 2548501145
444 2587730122
445 2587736236
446 2643992329
447 2644243982
448 2644292228
449 2644292706
450 2644294465
451 2644645762
452 2739244210
453 2774137857
454 2904479814
455 2904479893
456 2904480695
457 2904482354
458 2910251121
459 2990713803
460 8055698446

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00817

IMS

impB/mucB/samB family

5

149

0.96

PF13438

DUF4113

Domain of unknown function (DUF4113)

393

446

0.91

PF11799

IMS_C

impB/mucB/samB family C-terminal domain

248

364

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.8614 2 211
4dez-assembly1.cif.gz_A structure of msdpo4 0.8567 2 244
4dez-assembly1.cif.gz_A structure of msdpo4 0.8363 2 244
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.8303 2 211
4r8u-assembly2.cif.gz_B s-sad structure of dinb-dna complex 0.8159 2 355
ID Description Score Start End Superfamily
af_P04152_244_354_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9779 252 361 3.30.1490.100
af_P04152_244_354_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9607 252 361 3.30.1490.100
af_Q2FYS2_259_365_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9157 252 364 3.30.1490.100
af_O74944_370_477_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9133 248 360 3.30.1490.100
af_D3ZRU9_536_629_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9084 77 152 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A6I1P3D6-F1-model_v4 deleted 0.9744 2 153
AF-A0A843N8L4-F1-model_v4 deleted 0.9709 1 144
AF-A0A3M4Z935-F1-model_v4 deleted 0.9701 250 349
AF-A0A6I1WSZ3-F1-model_v4 DNA polymerase V subunit UmuC 0.9695 275 352 GO:0003684
GO:0006281
AF-A0A3D5JM81-F1-model_v4 deleted 0.9651 2 235

Map