F343387

General Info

Members Datasets Scaffolds Average Seq Length
230 154 460 385

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0000006|Ga0496104_0000006_429733_431046
Length 437
Sequence MLDLKLIREDPERVRTALARRGEAVAARLDAVLELDSRRRGLIPTLEQLRASRNAAAEEIAKAKHAGEDASAAIAAQREVGAREKLLSSELAEVEDQLQAALAPLPNLPDPSAAAGPEDELVKVVGEPRLGAVESIAAAAVGAPAKPSEGRVGTVRDHLELAGPMIDMDAAAQLSGSRFAYLKGDLVLVELALVRFALEKLRGHGFEPVIPPVLVRERALYGTGFLPDTEQQIYRLADDELYLVGTSEVALASLHDEEILPVERLPLRYAGFSPCFRREAGAAGKDTRGIFRVHQFDKVEMFSFVAPEQSRDEHERILAIEEEILAELELPYRVVNIAVTDLGNSAAKKYDCEAWLPSQGRYRELTSCSNTTDYQARRLNIRLRREKRTEVLHTLNGTAVAVGRTIIALLENGQREDGSVALPDALVAYGAPGVLGS

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
94 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
97 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
106 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
112 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
124 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
151 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
152 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
153 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
154 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 14.78
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0000006 3300048907 Bacteria 536446
2 JGI25407J50210_10017384 3300003373 Bacteria 1867
3 Ga0070683_100061198 3300005329 Bacteria 3500
4 Ga0070683_100072626 3300005329 Bacteria 3212
5 Ga0070683_100112401 3300005329 Bacteria 2570
6 Ga0070680_100044818 3300005336 Bacteria 3594
7 Ga0070682_100202579 3300005337 Bacteria 1401
8 Ga0070660_100026375 3300005339 Bacteria 4325
9 Ga0070691_10051301 3300005341 Bacteria 1970
10 Ga0070661_100023941 3300005344 Bacteria 4381
11 Ga0070674_100002107 3300005356 Bacteria 10917
12 Ga0070659_100013573 3300005366 Bacteria 6066
13 Ga0070711_100019980 3300005439 Bacteria 4308
14 Ga0070711_100026223 3300005439 Bacteria 3818
15 Ga0070711_100029411 3300005439 Bacteria 3625
16 Ga0070662_100268466 3300005457 Bacteria 1377
17 Ga0070681_10043471 3300005458 Bacteria 4501
18 Ga0068867_100021914 3300005459 Bacteria 4563
19 Ga0070679_100036321 3300005530 Bacteria 4889
20 Ga0070684_100016176 3300005535 Bacteria 6094
21 Ga0068853_100173679 3300005539 Bacteria 1951
22 Ga0070695_100085122 3300005545 Bacteria 2099
23 Ga0070665_100000911 3300005548 Bacteria 37941
24 Ga0070704_100085806 3300005549 Bacteria 2331
25 Ga0070664_100067693 3300005564 Bacteria 3052
26 Ga0070664_100249381 3300005564 Bacteria 1595
27 Ga0068857_100028944 3300005577 Bacteria 4889
28 Ga0068854_100081298 3300005578 Bacteria 2393
29 Ga0068856_100010934 3300005614 Bacteria 8808
30 Ga0068856_100135826 3300005614 Bacteria 2464
31 Ga0068852_100002021 3300005616 Bacteria 13820
32 Ga0081455_10026544 3300005937 Bacteria 5323
33 Ga0081455_10236198 3300005937 Bacteria 1346
34 Ga0081538_10000071 3300005981 Bacteria 96238
35 Ga0081538_10001191 3300005981 Bacteria 27404
36 Ga0081538_10012185 3300005981 Bacteria 6910
37 Ga0081540_1000568 3300005983 Bacteria 35821
38 Ga0081539_10001045 3300005985 Bacteria 50690
39 Ga0081539_10003448 3300005985 Bacteria 19419
40 Ga0070716_100088666 3300006173 Bacteria 1866
41 Ga0075430_100004279 3300006846 Bacteria 12053
42 Ga0075430_100244855 3300006846 Bacteria 1486
43 Ga0105245_10411121 3300009098 Bacteria 1354
44 Ga0114129_10273775 3300009147 Bacteria 2258
45 Ga0114129_10325494 3300009147 Bacteria 2042
46 Ga0105242_10299393 3300009176 Bacteria 1467
47 Ga0105237_10003109 3300009545 Bacteria 19993
48 Ga0105237_10038494 3300009545 Bacteria 4829
49 Ga0105238_10050598 3300009551 Bacteria 4182
50 Ga0157370_10028654 3300013104 Bacteria 5475
51 Ga0157369_10032044 3300013105 Bacteria 5782
52 Ga0157372_10040091 3300013307 Bacteria 5171
53 Ga0213874_10000680 3300021377 Bacteria 6873
54 Ga0213876_10009973 3300021384 Bacteria 5104
55 Ga0207688_10064176 3300025901 Bacteria 2072
56 Ga0207688_10092589 3300025901 Bacteria 1737
57 Ga0207699_10044097 3300025906 Bacteria 2595
58 Ga0207707_10021148 3300025912 Bacteria 5686
59 Ga0207695_10002407 3300025913 Bacteria 27694
60 Ga0207671_10002384 3300025914 Bacteria 20174
61 Ga0207693_10013991 3300025915 Bacteria 6462
62 Ga0207663_10019318 3300025916 Bacteria 3835
63 Ga0207663_10035680 3300025916 Bacteria 2986
64 Ga0207662_10006996 3300025918 Bacteria 6124
65 Ga0207657_10009559 3300025919 Bacteria 9731
66 Ga0207652_10173847 3300025921 Bacteria 1933
67 Ga0207694_10091397 3300025924 Bacteria 2402
68 Ga0207690_10004710 3300025932 Bacteria 8053
69 Ga0207686_10173351 3300025934 Bacteria 1523
70 Ga0207709_10048857 3300025935 Bacteria 2579
71 Ga0207669_10013855 3300025937 Bacteria 4023
72 Ga0207704_10114550 3300025938 Bacteria 1830
73 Ga0207661_10041219 3300025944 Bacteria 3633
74 Ga0207661_10091172 3300025944 Bacteria 2539
75 Ga0207661_10104653 3300025944 Bacteria 2383
76 Ga0207661_10227791 3300025944 Bacteria 1649
77 Ga0207679_10049086 3300025945 Bacteria 3077
78 Ga0207712_10154171 3300025961 Bacteria 1778
79 Ga0207708_10006410 3300026075 Bacteria 8718
80 Ga0207708_10017327 3300026075 Bacteria 5423
81 Ga0207702_10042932 3300026078 Bacteria 3794
82 Ga0207702_10045788 3300026078 Bacteria 3680
83 Ga0207648_10099398 3300026089 Bacteria 2548
84 Ga0207648_10177838 3300026089 Bacteria 1882
85 Ga0207675_100148718 3300026118 Bacteria 2228
86 Ga0207675_100154282 3300026118 Bacteria 2188
87 Ga0207698_10185407 3300026142 Bacteria 1848
88 Ga0207428_10198206 3300027907 Bacteria 1511
89 Ga0268266_10004582 3300028379 Bacteria 13202
90 Ga0265337_1017973 3300028556 Bacteria 2254
91 Ga0265319_1001901 3300028563 Bacteria 11865
92 Ga0265318_10000545 3300028577 Bacteria 26811
93 Ga0265336_10000001 3300028666 Bacteria 916179
94 Ga0265338_10000004 3300028800 Bacteria 644793
95 Ga0265324_10004424 3300029957 Bacteria 6364
96 Ga0265325_10061308 3300031241 Bacteria 1908
97 Ga0265340_10000002 3300031247 Bacteria 711693
98 Ga0265327_10002862 3300031251 Bacteria 17366
99 Ga0265316_10069903 3300031344 Bacteria 2709
100 Ga0265342_10089059 3300031712 Bacteria 1771
101 Ga0307405_10083111 3300031731 Bacteria 2098
102 Ga0307410_10193064 3300031852 Bacteria 1550
103 Ga0307412_10091147 3300031911 Bacteria 2133
104 Ga0307409_100019863 3300031995 Bacteria 4562
105 Ga0307409_100089631 3300031995 Bacteria 2515
106 Ga0307409_100102707 3300031995 Bacteria 2376
107 Ga0307409_100243741 3300031995 Bacteria 1638
108 Ga0307416_100174863 3300032002 Bacteria 2004
109 Ga0307416_100233999 3300032002 Bacteria 1774
110 Ga0307414_10052251 3300032004 Bacteria 2843
111 Ga0307414_10094643 3300032004 Bacteria 2230
112 Ga0307414_10142814 3300032004 Bacteria 1877
113 Ga0307411_10058510 3300032005 Bacteria 2551
114 Ga0307415_100000210 3300032126 Bacteria 25787
115 Ga0307415_100002294 3300032126 Bacteria 9490
116 Ga0307415_100152394 3300032126 Bacteria 1781
117 Ga0373925_0114391 3300037068 Bacteria 2088
118 Ga0395900_0123978 3300037418 Bacteria 2650
119 Ga0436364_0259354 3300037853 Bacteria 1339
120 Ga0436364_1403271 3300037853 Bacteria 2455
121 Ga0436364_1483213 3300037853 Bacteria 11245
122 Ga0395901_0083097 3300038443 Bacteria 3347
123 Ga0395901_0089570 3300038443 Bacteria 3220
124 Ga0436365_0403715 3300039437 Bacteria 17000
125 Ga0436365_0669080 3300039437 Bacteria 5688
126 Ga0436365_1102108 3300039437 Bacteria 21525
127 Ga0436363_1400525 3300039450 Bacteria 18081
128 Ga0436362_1077977 3300039453 Bacteria 1542
129 Ga0466965_0028797 3300044683 Bacteria 2700
130 Ga0466963_0010387 3300044694 Bacteria 5635
131 Ga0466963_0023327 3300044694 Bacteria 3927
132 Ga0466963_0107381 3300044694 Bacteria 1914
133 Ga0466964_0010832 3300044706 Bacteria 3444
134 Ga0466964_0036569 3300044706 Bacteria 1969
135 Ga0466964_0040700 3300044706 Bacteria 1878
136 Ga0466971_0041149 3300044719 Bacteria 2075
137 Ga0466971_0049837 3300044719 Bacteria 1884
138 Ga0466957_0006306 3300044842 Bacteria 6690
139 Ga0466960_0000181 3300044901 Bacteria 21653
140 Ga0466960_0023264 3300044901 Bacteria 2780
141 Ga0466960_0060644 3300044901 Bacteria 1854
142 Ga0466960_0087780 3300044901 Bacteria 1580
143 Ga0466959_0023623 3300045049 Bacteria 4550
144 Ga0466959_0033676 3300045049 Bacteria 3789
145 Ga0466959_0117504 3300045049 Bacteria 1893
146 Ga0466958_0001617 3300045836 Bacteria 10842
147 Ga0466967_0025973 3300045976 Bacteria 4841
148 Ga0466967_0046497 3300045976 Bacteria 3779
149 Ga0466967_0134855 3300045976 Bacteria 2295
150 Ga0466967_0238658 3300045976 Bacteria 1733
151 Ga0466967_0348218 3300045976 Bacteria 1433
152 Ga0495641_0017560 3300046461 Bacteria 3725
153 Ga0495653_0000506 3300046463 Bacteria 30090
154 Ga0495650_0000053 3300046471 Bacteria 316684
155 Ga0495662_0022847 3300046476 Bacteria 3019
156 Ga0495664_0000022 3300046477 Bacteria 134123
157 Ga0495618_0000046 3300046514 Bacteria 93942
158 Ga0495630_0000241 3300046517 Bacteria 43800
159 Ga0495645_0000022 3300046543 Bacteria 137019
160 Ga0495645_0000119 3300046543 Bacteria 53463
161 Ga0495656_0000421 3300046615 Bacteria 13851
162 Ga0495657_0000226 3300046675 Bacteria 50909
163 Ga0495604_0000148 3300047317 Bacteria 60608
164 Ga0495684_0007055 3300047471 Bacteria 8725
165 Ga0495686_0000011 3300047472 Bacteria 514750
166 Ga0495686_0002303 3300047472 Bacteria 18261
167 Ga0495686_0015976 3300047472 Bacteria 5103
168 Ga0495686_0028260 3300047472 Unclassified 3653
169 Ga0496100_0001662 3300048903 Bacteria 11028
170 Ga0496100_0012467 3300048903 Bacteria 4875
171 Ga0496101_0001988 3300048904 Bacteria 12406
172 Ga0496101_0093078 3300048904 Bacteria 2245
173 Ga0496102_0000040 3300048905 Bacteria 196737
174 Ga0496102_0012915 3300048905 Bacteria 7232
175 Ga0496103_0000067 3300048906 Bacteria 125906
176 Ga0496103_0070023 3300048906 Bacteria 2194
177 Ga0496103_0073242 3300048906 Bacteria 2146
178 Ga0496104_0020635 3300048907 Bacteria 6042
179 Ga0496105_0049457 3300048908 Bacteria 3471
180 Ga0496106_0012354 3300048909 Bacteria 6303
181 Ga0496106_0036510 3300048909 Bacteria 3676
182 Ga0496107_0002155 3300048910 Bacteria 12647
183 Ga0496107_0110945 3300048910 Bacteria 2016
184 Ga0496108_0002529 3300048911 Bacteria 14633
185 Ga0496109_0006546 3300048912 Bacteria 9807
186 Ga0496109_0053151 3300048912 Bacteria 3693
187 Ga0496109_0149389 3300048912 Bacteria 2187
188 Ga0496110_0000064 3300048913 Bacteria 52955
189 Ga0496110_0003240 3300048913 Bacteria 12403
190 Ga0496111_0000012 3300048914 Bacteria 83376
191 Ga0496111_0043441 3300048914 Bacteria 3230
192 Ga0496112_0009678 3300048915 Bacteria 8698
193 Ga0496112_0020405 3300048915 Bacteria 6281
194 Ga0496112_0047971 3300048915 Bacteria 4189
195 Ga0496112_0052291 3300048915 Bacteria 4009
196 Ga0496113_0007552 3300048916 Bacteria 7009
197 Ga0496113_0019231 3300048916 Bacteria 4774
198 Ga0496113_0187331 3300048916 Bacteria 1642
199 Ga0496115_0000059 3300048918 Bacteria 102022
200 Ga0496115_0000087 3300048918 Bacteria 86513
201 Ga0496115_0005651 3300048918 Bacteria 9094
202 Ga0496121_0002770 3300048924 Bacteria 26007
203 Ga0496124_0055863 3300048927 Bacteria 3334
204 Ga0501034_0094320 3300049571 Bacteria 2989
205 Ga0501039_0027697 3300049575 Bacteria 4358
206 Ga0501041_0091657 3300049577 Bacteria 1876
207 Ga0501042_0054730 3300049578 Bacteria 2846
208 Ga0501069_0051658 3300049585 Bacteria 2288
209 Ga0501071_0015579 3300049587 Bacteria 5221
210 Ga0501072_0041552 3300049588 Bacteria 3612
211 Ga0501074_0061155 3300049590 Bacteria 2714
212 Ga0501075_0050196 3300049591 Bacteria 3136
213 Ga0501076_0024909 3300049592 Bacteria 4628
214 Ga0501076_0034364 3300049592 Bacteria 3963
215 Ga0501076_0072282 3300049592 Bacteria 2760
216 Ga0501077_0017649 3300049593 Bacteria 4507
217 Ga0501080_0034112 3300049742 Bacteria 4750
218 Ga0501081_0015369 3300049743 Bacteria 5050
219 Ga0501045_0038274 3300049824 Bacteria 3488
220 nmdc:mga0qj67_2907_c1 3300050509 Bacteria 12287
221 nmdc:mga06r32_149029_c1 3300050510 Bacteria 2317
222 nmdc:mga08y16_357044_c1 3300050511 Bacteria 1501
223 Ga0495601_0001152 3300053077 Bacteria 14446
224 Ga0495612_0000032 3300053078 Bacteria 78122
225 Ga0500616_0004560 3300053153 Bacteria 9808
226 Ga0501084_0014085 3300054114 Bacteria 6622
227 Ga0501082_0047277 3300060353 Bacteria 3708
228 Ga0501082_0102313 3300060353 Bacteria 2478
229 Ga0530510_0005201 3300061734 Bacteria 8980
230 Ga0530510_0051183 3300061734 Bacteria 2984
231 Ga0496104_0000006
232 JGI25407J50210_10017384
233 Ga0070683_100061198
234 Ga0070683_100072626
235 Ga0070683_100112401
236 Ga0070680_100044818
237 Ga0070682_100202579
238 Ga0070660_100026375
239 Ga0070691_10051301
240 Ga0070661_100023941
241 Ga0070674_100002107
242 Ga0070659_100013573
243 Ga0070711_100019980
244 Ga0070711_100026223
245 Ga0070711_100029411
246 Ga0070662_100268466
247 Ga0070681_10043471
248 Ga0068867_100021914
249 Ga0070679_100036321
250 Ga0070684_100016176
251 Ga0068853_100173679
252 Ga0070695_100085122
253 Ga0070665_100000911
254 Ga0070704_100085806
255 Ga0070664_100067693
256 Ga0070664_100249381
257 Ga0068857_100028944
258 Ga0068854_100081298
259 Ga0068856_100010934
260 Ga0068856_100135826
261 Ga0068852_100002021
262 Ga0081455_10026544
263 Ga0081455_10236198
264 Ga0081538_10000071
265 Ga0081538_10001191
266 Ga0081538_10012185
267 Ga0081540_1000568
268 Ga0081539_10001045
269 Ga0081539_10003448
270 Ga0070716_100088666
271 Ga0075430_100004279
272 Ga0075430_100244855
273 Ga0105245_10411121
274 Ga0114129_10273775
275 Ga0114129_10325494
276 Ga0105242_10299393
277 Ga0105237_10003109
278 Ga0105237_10038494
279 Ga0105238_10050598
280 Ga0157370_10028654
281 Ga0157369_10032044
282 Ga0157372_10040091
283 Ga0213874_10000680
284 Ga0213876_10009973
285 Ga0207688_10064176
286 Ga0207688_10092589
287 Ga0207699_10044097
288 Ga0207707_10021148
289 Ga0207695_10002407
290 Ga0207671_10002384
291 Ga0207693_10013991
292 Ga0207663_10019318
293 Ga0207663_10035680
294 Ga0207662_10006996
295 Ga0207657_10009559
296 Ga0207652_10173847
297 Ga0207694_10091397
298 Ga0207690_10004710
299 Ga0207686_10173351
300 Ga0207709_10048857
301 Ga0207669_10013855
302 Ga0207704_10114550
303 Ga0207661_10041219
304 Ga0207661_10091172
305 Ga0207661_10104653
306 Ga0207661_10227791
307 Ga0207679_10049086
308 Ga0207712_10154171
309 Ga0207708_10006410
310 Ga0207708_10017327
311 Ga0207702_10042932
312 Ga0207702_10045788
313 Ga0207648_10099398
314 Ga0207648_10177838
315 Ga0207675_100148718
316 Ga0207675_100154282
317 Ga0207698_10185407
318 Ga0207428_10198206
319 Ga0268266_10004582
320 Ga0265337_1017973
321 Ga0265319_1001901
322 Ga0265318_10000545
323 Ga0265336_10000001
324 Ga0265338_10000004
325 Ga0265324_10004424
326 Ga0265325_10061308
327 Ga0265340_10000002
328 Ga0265327_10002862
329 Ga0265316_10069903
330 Ga0265342_10089059
331 Ga0307405_10083111
332 Ga0307410_10193064
333 Ga0307412_10091147
334 Ga0307409_100019863
335 Ga0307409_100089631
336 Ga0307409_100102707
337 Ga0307409_100243741
338 Ga0307416_100174863
339 Ga0307416_100233999
340 Ga0307414_10052251
341 Ga0307414_10094643
342 Ga0307414_10142814
343 Ga0307411_10058510
344 Ga0307415_100000210
345 Ga0307415_100002294
346 Ga0307415_100152394
347 Ga0373925_0114391
348 Ga0395900_0123978
349 Ga0436364_0259354
350 Ga0436364_1403271
351 Ga0436364_1483213
352 Ga0395901_0083097
353 Ga0395901_0089570
354 Ga0436365_0403715
355 Ga0436365_0669080
356 Ga0436365_1102108
357 Ga0436363_1400525
358 Ga0436362_1077977
359 Ga0466965_0028797
360 Ga0466963_0010387
361 Ga0466963_0023327
362 Ga0466963_0107381
363 Ga0466964_0010832
364 Ga0466964_0036569
365 Ga0466964_0040700
366 Ga0466971_0041149
367 Ga0466971_0049837
368 Ga0466957_0006306
369 Ga0466960_0000181
370 Ga0466960_0023264
371 Ga0466960_0060644
372 Ga0466960_0087780
373 Ga0466959_0023623
374 Ga0466959_0033676
375 Ga0466959_0117504
376 Ga0466958_0001617
377 Ga0466967_0025973
378 Ga0466967_0046497
379 Ga0466967_0134855
380 Ga0466967_0238658
381 Ga0466967_0348218
382 Ga0495641_0017560
383 Ga0495653_0000506
384 Ga0495650_0000053
385 Ga0495662_0022847
386 Ga0495664_0000022
387 Ga0495618_0000046
388 Ga0495630_0000241
389 Ga0495645_0000022
390 Ga0495645_0000119
391 Ga0495656_0000421
392 Ga0495657_0000226
393 Ga0495604_0000148
394 Ga0495684_0007055
395 Ga0495686_0000011
396 Ga0495686_0002303
397 Ga0495686_0015976
398 Ga0495686_0028260
399 Ga0496100_0001662
400 Ga0496100_0012467
401 Ga0496101_0001988
402 Ga0496101_0093078
403 Ga0496102_0000040
404 Ga0496102_0012915
405 Ga0496103_0000067
406 Ga0496103_0070023
407 Ga0496103_0073242
408 Ga0496104_0020635
409 Ga0496105_0049457
410 Ga0496106_0012354
411 Ga0496106_0036510
412 Ga0496107_0002155
413 Ga0496107_0110945
414 Ga0496108_0002529
415 Ga0496109_0006546
416 Ga0496109_0053151
417 Ga0496109_0149389
418 Ga0496110_0000064
419 Ga0496110_0003240
420 Ga0496111_0000012
421 Ga0496111_0043441
422 Ga0496112_0009678
423 Ga0496112_0020405
424 Ga0496112_0047971
425 Ga0496112_0052291
426 Ga0496113_0007552
427 Ga0496113_0019231
428 Ga0496113_0187331
429 Ga0496115_0000059
430 Ga0496115_0000087
431 Ga0496115_0005651
432 Ga0496121_0002770
433 Ga0496124_0055863
434 Ga0501034_0094320
435 Ga0501039_0027697
436 Ga0501041_0091657
437 Ga0501042_0054730
438 Ga0501069_0051658
439 Ga0501071_0015579
440 Ga0501072_0041552
441 Ga0501074_0061155
442 Ga0501075_0050196
443 Ga0501076_0024909
444 Ga0501076_0034364
445 Ga0501076_0072282
446 Ga0501077_0017649
447 Ga0501080_0034112
448 Ga0501081_0015369
449 Ga0501045_0038274
450 nmdc:mga0qj67_2907_c1
451 nmdc:mga06r32_149029_c1
452 nmdc:mga08y16_357044_c1
453 Ga0495601_0001152
454 Ga0495612_0000032
455 Ga0500616_0004560
456 Ga0501084_0014085
457 Ga0501082_0047277
458 Ga0501082_0102313
459 Ga0530510_0005201
460 Ga0530510_0051183

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02403

Seryl_tRNA_N

Seryl-tRNA synthetase N-terminal domain

1

109

0.99

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

232

413

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7u2b-assembly1.cif.gz_A cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(gcu-tl) 0.9131 43 340
8ffy-assembly1.cif.gz_A cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(uga-tl) 0.909 44 340
3vbb-assembly2.cif.gz_D crystal structure of seryl-trna synthetase from human at 2.9 angstroms 0.9082 27 340
6x94-assembly1.cif.gz_A an orthogonal seryl-trna synthetase/trna pair for noncanonical amino acid mutagenesis in escherichia coli 0.9055 20 340
3vbb-assembly2.cif.gz_C crystal structure of seryl-trna synthetase from human at 2.9 angstroms 0.9017 27 334
ID Description Score Start End Superfamily
2dq0B02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9534 32 340 3.30.930.10
af_P9WFT7_105_418_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9451 34 340 3.30.930.10
af_I1JVB5_172_505_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9419 32 340 3.30.930.10
2dq3B02 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9397 32 340 3.30.930.10
af_P38705_130_446_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9366 35 337 3.30.930.10
ID Description Score Start End GO Terms
AF-F3BPT5-F1-model_v4 deleted 0.9793 212 302
AF-A0A7V5GYJ3-F1-model_v4 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) 0.976 195 337 GO:0004828
GO:0005524
GO:0005737
GO:0006434
AF-A0A353Y9I4-F1-model_v4 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) 0.9758 195 331 GO:0004828
GO:0005524
GO:0005737
GO:0006434
AF-X0Y944-F1-model_v4 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) 0.9714 229 338 GO:0004828
GO:0005524
GO:0005737
GO:0006434
AF-A0A352W1Y4-F1-model_v4 serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) 0.9697 204 338 GO:0004828
GO:0005524
GO:0005737
GO:0006434

Map