F343574

General Info

Members Datasets Scaffolds Average Seq Length
230 157 190 651

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3007614139|3007618871
Length 719
Sequence RGRHFFARILSGQWDVGDLVRSVPCRMSNSVRDRFRARESGCTNNNQLIGIKDFMSTLAYRRDIDGLRAVAVIAVVLFHFGVPGFTGGFVGVDVFFVISGYLITSIIWNQRQAGRFSFVEFWARRARRILPALFAMIVAVLAVGWFLMAPKDYEELGRSVRYQVLFVSNILFMRQDGYFDVASDLKPMLHTWSLAVEEQFYIIFPLLLTLLSSRLKHWRLALFGVLLVSFGLSVWAVSHHPEKAFFLLPMRAWELLAGAMLAVAPQHAWRLKPMAAQGLSLLGMGLILLAVFGYDNATPFPGAAALLPVLGVVLLIFANGHRQTVVGQFLSSKVMVGFGLISYSWYLWHWPVFVFSSYASVDETSALDSAGLILLTLVLGYLSWKFIETPFRERRLLAGRRPILLAGALGVLVLALAGQTLRWTDGLPWRLSDQALQYARGHDWRPELMACLADDKTPDDKLFCHFGVADLPAQAMVWGDSHATALIPVFDDGAKAHDVSVILASSPGCIPVEGLEHGPVCAHFNRRIEQALKEKSVSDVVLVARWSLYLYGDANGDLGHVLRTPDGRYDRANAEQRLAAGLRARVAQLRASGHRVWLVKEAPLQPFSPPYRLTRLAMLDRSVEGVGQQVAVHHERQVFISQLFAELGKDPAVHVVDPAPRLCDERGLCHAELDGYSLYTDDNHLSEVGARLVAPIMEPLFINLQSRENPGKARTNAAK

Samples

Sample ID Description Type Environment
1 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
2 2511231008 Pseudomonas sp. GM21 Isolate Nodule
3 2511231010 Pseudomonas sp. GM25 Isolate Nodule
4 2511231011 Pseudomonas sp. GM30 Isolate Nodule
5 2511231012 Pseudomonas sp. GM33 Isolate Nodule
6 2511231020 Pseudomonas sp. GM74 Isolate Nodule
7 2511231023 Pseudomonas sp. GM80 Isolate Nodule
8 2600255318 Pseudomonas putida NFIX47 Isolate Rhizoplane
9 2603880185 Pseudomonas sp. NFIX46 Isolate Rhizoplane
10 2603880199 Pseudomonas sp. NFIX49 Isolate Rhizoplane
11 2643221589 Pseudomonas sp. Root68 Isolate Unclassified
12 2643221602 Pseudomonas sp. Root71 Isolate Unclassified
13 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
14 2773857673 Pseudomonas sp. 443 Isolate Unclassified
15 2784132063 Pseudomonas sp. 424 Isolate Unclassified
16 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
17 2808606377 Pseudomonas sp. SJZ083 Isolate Rhizosphere
18 2808606381 Pseudomonas sp. SJZ077 Isolate Rhizosphere
19 2818991456 Pseudomonas koreensis 3286 Isolate Rhizosphere
20 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
21 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
22 2849560528 Caulobacter zeae 410 Isolate Unclassified
23 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
24 2851153111 Caulobacter radicis 736 Isolate Unclassified
25 2852657418 Pseudomonas sp. JAI115 Isolate Rhizosphere
26 2878029506 Pseudomonas fluorescens DR397 Isolate Rhizosphere
27 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
28 2880230671 Pseudomonas fluorescens LBUM677 Isolate Unclassified
29 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
30 2904518522 Pseudomonas fluorescens 4488 Isolate Rhizosphere
31 2919456309 Pseudomonas sp. 3296 Isolate Rhizosphere
32 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
33 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
34 2939636861 Pseudomonas sp. 2725 Isolate Rhizosphere
35 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
36 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
37 3007614139 Pseudomonas sp. PB106 Isolate Unclassified
38 3007718800 Pseudomonas fluorescens BW11P2 Isolate Rhizosphere
39 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
40 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
41 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
42 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
43 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
50 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
72 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
73 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
74 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
75 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
76 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
77 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
78 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
79 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
80 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
81 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
82 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
86 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
87 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
93 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
94 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
95 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
96 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
97 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
98 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
99 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
100 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
101 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
102 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
105 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
106 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
107 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
116 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
117 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
118 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
123 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
124 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
127 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
140 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
148 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
149 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
150 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
151 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
154 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
155 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
156 8056172158 Pseudomonas ekonensis COR58 Isolate Rhizosphere
157 8056569372 Pseudomonas serboccidentalis IT-P374 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.61
Metatranscriptomes 0
Isolates 17.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.52
Nodule 6.09
Rhizoplane 3.48
Rhizosphere 70.43
Stem 0
Stem Tuber 0
Unclassified 13.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10158617 3300003323 Bacteria 2590
2 Ga0055530_10004950 3300003791 Bacteria 6592
3 Ga0055540_1000013 3300003792 Bacteria 262274
4 Ga0065707_10089126 3300005295 Unclassified 4460
5 Ga0070660_100003917 3300005339 Bacteria 10286
6 Ga0068857_100007219 3300005577 Bacteria 9566
7 Ga0075432_10018730 3300006058 Bacteria 2362
8 Ga0075367_10022564 3300006178 Bacteria 3532
9 Ga0079104_1000424 3300006946 Bacteria 48276
10 Ga0105251_10000009 3300009011 Bacteria 192384
11 Ga0105251_10010952 3300009011 Bacteria 5214
12 Ga0105251_10032653 3300009011 Bacteria 2592
13 Ga0105251_10035350 3300009011 Bacteria 2466
14 Ga0105244_10016579 3300009036 Bacteria 4192
15 Ga0105244_10041821 3300009036 Bacteria 2374
16 Ga0105250_10001636 3300009092 Bacteria 11944
17 Ga0105250_10014295 3300009092 Bacteria 3264
18 Ga0105250_10014859 3300009092 Bacteria 3193
19 Ga0105250_10018440 3300009092 Bacteria 2826
20 Ga0105250_10019357 3300009092 Bacteria 2753
21 Ga0105250_10025004 3300009092 Bacteria 2407
22 Ga0105248_10064817 3300009177 Bacteria 4101
23 Ga0105248_10131147 3300009177 Bacteria 2828
24 Ga0157370_10000901 3300013104 Bacteria 37713
25 Ga0157370_10110716 3300013104 Bacteria 2567
26 Ga0157370_10124662 3300013104 Bacteria 2405
27 Ga0163162_10058293 3300013306 Bacteria 3890
28 Ga0163162_10160854 3300013306 Bacteria 2367
29 Ga0157372_10082796 3300013307 Bacteria 3633
30 Ga0157375_10139770 3300013308 Bacteria 2548
31 Ga0182008_10021955 3300014497 Bacteria 3272
32 Ga0182008_10028038 3300014497 Bacteria 2849
33 Ga0157379_10015997 3300014968 Bacteria 6595
34 Ga0182006_1011424 3300015261 Bacteria 3907
35 Ga0182006_1021411 3300015261 Bacteria 2697
36 Ga0209675_1000989 3300025291 Bacteria 17959
37 Ga0209050_1000567 3300025298 Bacteria 60093
38 Ga0209050_1011285 3300025298 Bacteria 4264
39 Ga0209051_1000022 3300025303 Bacteria 474879
40 Ga0209257_1000030 3300025304 Bacteria 689812
41 Ga0207696_1000020 3300025711 Bacteria 434998
42 Ga0207696_1000031 3300025711 Bacteria 384169
43 Ga0207696_1003998 3300025711 Bacteria 6478
44 Ga0207696_1009378 3300025711 Bacteria 3653
45 Ga0207655_1004304 3300025728 Bacteria 10174
46 Ga0207713_1000032 3300025735 Bacteria 276465
47 Ga0207713_1002574 3300025735 Bacteria 13101
48 Ga0207713_1010199 3300025735 Bacteria 5218
49 Ga0207705_10005615 3300025909 Bacteria 9366
50 Ga0207657_10014036 3300025919 Bacteria 7837
51 Ga0207691_10106535 3300025940 Bacteria 2497
52 Ga0207648_10013580 3300026089 Bacteria 7567
53 Ga0207674_10033747 3300026116 Bacteria 5357
54 Ga0209281_1000016 3300027111 Bacteria 588107
55 Ga0307411_10003112 3300032005 Bacteria 7600
56 Ga0439438_013921 3300041405 Bacteria 2408
57 Ga0439447_006764 3300041407 Bacteria 3687
58 Ga0439466_0019570 3300041411 Bacteria 2423
59 Ga0451849_1335290 3300041505 Bacteria 6742
60 Ga0439432_015531 3300042006 Bacteria 2568
61 Ga0439451_004724 3300042009 Bacteria 2770
62 Ga0439456_005679 3300042013 Bacteria 2536
63 Ga0450922_000629 3300042124 Bacteria 3686
64 Ga0450905_001839 3300042142 Bacteria 2715
65 Ga0450893_0003353 3300042532 Bacteria 2523
66 Ga0453683_0002226 3300044673 Bacteria 15340
67 Ga0453684_0009342 3300044712 Bacteria 17186
68 Ga0495627_014123 3300046453 Bacteria 2795
69 Ga0495590_0003887 3300046457 Bacteria 6076
70 Ga0495591_004074 3300046458 Bacteria 7281
71 Ga0495591_010387 3300046458 Bacteria 3613
72 Ga0495591_017183 3300046458 Bacteria 2493
73 Ga0495638_0040969 3300046460 Bacteria 2932
74 Ga0495638_0055390 3300046460 Bacteria 2462
75 Ga0495653_0027220 3300046463 Bacteria 4576
76 Ga0495605_0014699 3300046474 Bacteria 4278
77 Ga0495605_0025231 3300046474 Bacteria 3098
78 Ga0495639_0021417 3300046475 Bacteria 2829
79 Ga0495584_0015821 3300046491 Bacteria 3847
80 Ga0495585_0039105 3300046492 Bacteria 2667
81 Ga0495585_0039961 3300046492 Bacteria 2635
82 Ga0495585_0071076 3300046492 Bacteria 1897
83 Ga0495594_0032003 3300046499 Bacteria 2853
84 Ga0495607_0030481 3300046501 Bacteria 3311
85 Ga0495607_0044585 3300046501 Bacteria 2614
86 Ga0495607_0048016 3300046501 Bacteria 2497
87 Ga0495606_0001889 3300046507 Bacteria 26207
88 Ga0495606_0030283 3300046507 Bacteria 3783
89 Ga0495606_0040429 3300046507 Bacteria 3134
90 Ga0495606_0057267 3300046507 Bacteria 2510
91 Ga0495610_0023344 3300046512 Bacteria 3366
92 Ga0495610_0024523 3300046512 Bacteria 3252
93 Ga0495610_0032390 3300046512 Bacteria 2715
94 Ga0495610_0034054 3300046512 Bacteria 2626
95 Ga0495616_0024579 3300046513 Bacteria 3229
96 Ga0495616_0035407 3300046513 Bacteria 2584
97 Ga0495620_0023715 3300046515 Bacteria 2928
98 Ga0495620_0026356 3300046515 Bacteria 2734
99 Ga0495620_0027050 3300046515 Bacteria 2689
100 Ga0495620_0028696 3300046515 Bacteria 2584
101 Ga0495631_0003022 3300046518 Bacteria 9311
102 Ga0495632_0032314 3300046519 Bacteria 2697
103 Ga0495632_0033123 3300046519 Bacteria 2655
104 Ga0495632_0039949 3300046519 Bacteria 2365
105 Ga0495637_0006736 3300046520 Bacteria 5749
106 Ga0495637_0016286 3300046520 Bacteria 3476
107 Ga0495637_0024837 3300046520 Bacteria 2709
108 Ga0495648_0017448 3300046524 Bacteria 5129
109 Ga0495648_0047084 3300046524 Bacteria 2668
110 Ga0495648_0051286 3300046524 Bacteria 2515
111 Ga0495642_0001762 3300046528 Bacteria 9324
112 Ga0495654_0012519 3300046530 Bacteria 4554
113 Ga0495654_0034244 3300046530 Bacteria 2564
114 Ga0495654_0036356 3300046530 Bacteria 2474
115 Ga0495609_0027526 3300046538 Bacteria 2597
116 Ga0495597_0032659 3300046542 Bacteria 2361
117 Ga0495668_0037856 3300046616 Bacteria 2697
118 Ga0495634_0068580 3300046642 Bacteria 2342
119 Ga0495611_0031112 3300046648 Bacteria 2348
120 Ga0495625_0027333 3300046660 Bacteria 4297
121 Ga0495625_0043215 3300046660 Bacteria 3269
122 Ga0495661_0040402 3300046665 Bacteria 2892
123 Ga0495669_0026640 3300046684 Bacteria 2527
124 Ga0495613_0083653 3300046689 Bacteria 2317
125 Ga0495624_0017295 3300046690 Bacteria 4842
126 Ga0495671_0028343 3300046692 Bacteria 2886
127 Ga0495671_0031986 3300046692 Bacteria 2687
128 Ga0495671_0035785 3300046692 Bacteria 2520
129 Ga0495649_0004446 3300046694 Bacteria 9160
130 Ga0495649_0018307 3300046694 Bacteria 3942
131 Ga0495649_0021754 3300046694 Bacteria 3592
132 Ga0495649_0041969 3300046694 Bacteria 2500
133 Ga0495589_0000002 3300046794 Bacteria 758846
134 Ga0495589_0030111 3300046794 Bacteria 2734
135 Ga0495589_0035485 3300046794 Bacteria 2500
136 Ga0495660_0033377 3300046810 Bacteria 2886
137 Ga0495672_0024089 3300047320 Bacteria 3928
138 Ga0495672_0032317 3300047320 Bacteria 3257
139 Ga0495672_0055271 3300047320 Bacteria 2317
140 Ga0495683_0006131 3300047323 Bacteria 6594
141 Ga0495683_0019830 3300047323 Bacteria 3467
142 Ga0495683_0036788 3300047323 Bacteria 2484
143 Ga0495679_015104 3300047446 Bacteria 2834
144 Ga0495679_017604 3300047446 Bacteria 2555
145 Ga0495673_0007047 3300047469 Bacteria 6520
146 Ga0495673_0015602 3300047469 Bacteria 3909
147 Ga0495673_0034256 3300047469 Bacteria 2348
148 Ga0495681_0020862 3300047470 Bacteria 3543
149 Ga0495681_0025251 3300047470 Bacteria 3111
150 Ga0495681_0031293 3300047470 Bacteria 2695
151 Ga0495681_0034697 3300047470 Bacteria 2511
152 Ga0495681_0036735 3300047470 Bacteria 2419
153 Ga0495686_0023243 3300047472 Bacteria 4091
154 Ga0495593_0021855 3300047673 Bacteria 3569
155 Ga0495626_0021054 3300048091 Bacteria 3242
156 Ga0496102_0143792 3300048905 Bacteria 2237
157 Ga0496103_0064996 3300048906 Bacteria 2275
158 Ga0496104_0122101 3300048907 Bacteria 2501
159 Ga0496109_0027621 3300048912 Bacteria 5069
160 Ga0496114_0008254 3300048917 Bacteria 8253
161 Ga0496116_0052310 3300048919 Bacteria 2706
162 Ga0496116_0054145 3300048919 Bacteria 2645
163 Ga0496117_0045340 3300048920 Bacteria 3176
164 Ga0496117_0061126 3300048920 Bacteria 2592
165 Ga0496118_0052419 3300048921 Bacteria 3111
166 Ga0496118_0064596 3300048921 Bacteria 2684
167 Ga0496119_0000579 3300048922 Bacteria 49357
168 Ga0496120_0000501 3300048923 Bacteria 61120
169 Ga0496121_0075988 3300048924 Bacteria 2680
170 Ga0496121_0101882 3300048924 Bacteria 2213
171 Ga0496122_0070961 3300048925 Bacteria 2484
172 Ga0496123_0049759 3300048926 Bacteria 2806
173 Ga0496124_0000039 3300048927 Bacteria 307831
174 Ga0496124_0083853 3300048927 Bacteria 2614
175 Ga0496125_0054432 3300048928 Bacteria 3269
176 Ga0496125_0080223 3300048928 Bacteria 2498
177 Ga0496125_0090547 3300048928 Bacteria 2295
178 Ga0496126_0064299 3300048929 Bacteria 3287
179 Ga0495678_014077 3300049459 Bacteria 3731
180 Ga0501046_0014455 3300049580 Bacteria 6660
181 Ga0501047_0003661 3300049581 Bacteria 14482
182 Ga0501067_0015907 3300049583 Bacteria 4161
183 Ga0501249_000491 3300049679 Bacteria 9748
184 Ga0500592_000025 3300053116 Bacteria 49551
185 Ga0500608_000641 3300053122 Bacteria 12875
186 Ga0500564_001710 3300053138 Bacteria 7739
187 Ga0500616_0027732 3300053153 Bacteria 3126
188 Ga0500627_0000169 3300053158 Bacteria 19309
189 Ga0500567_000035 3300053723 Bacteria 27782
190 Ga0500625_000003 3300053729 Bacteria 268493

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046492 Ga0495585_0071076 Ga0495585_0071076_12_1766 555
2 iso_pu_bacteria 2878738818 2878742236 570
3 iso_pu_bacteria 2924776078 2924780036 570
4 iso_pu_bacteria 2937877337 2937882566 570
5 iso_pu_bacteria 2958084443 2958089691 570
6 iso_pu_bacteria 2958144490 2958145883 570
7 3300009177 Ga0105248_10131147 Ga0105248_101311473 573
8 3300006178 Ga0075367_10022564 Ga0075367_100225642 575
9 3300009177 Ga0105248_10064817 Ga0105248_100648173 578
10 iso_pu_bacteria 2881161766 2881167357 581
11 3300032005 Ga0307411_10003112 Ga0307411_100031124 582
12 3300049583 Ga0501067_0015907 Ga0501067_0015907_191_2053 584
13 3300005339 Ga0070660_100003917 Ga0070660_1000039177 586
14 3300025909 Ga0207705_10005615 Ga0207705_100056155 586
15 3300025919 Ga0207657_10014036 Ga0207657_100140364 586
16 3300005577 Ga0068857_100007219 Ga0068857_1000072195 587
17 3300026116 Ga0207674_10033747 Ga0207674_100337473 587
18 3300049679 Ga0501249_000491 Ga0501249_000491_6356_8314 587
19 3300049581 Ga0501047_0003661 Ga0501047_0003661_12265_14175 588
20 3300003791 Ga0055530_10004950 Ga0055530_100049503 590
21 3300003792 Ga0055540_1000013 Ga0055540_1000013105 590
22 3300025298 Ga0209050_1000567 Ga0209050_100056727 590
23 3300025303 Ga0209051_1000022 Ga0209051_1000022162 590
24 3300025304 Ga0209257_1000030 Ga0209257_1000030360 590
25 3300053122 Ga0500608_000641 Ga0500608_000641_8580_10589 593
26 3300053138 Ga0500564_001710 Ga0500564_001710_4685_6694 593
27 3300053723 Ga0500567_000035 Ga0500567_000035_4932_6941 593
28 3300053729 Ga0500625_000003 Ga0500625_000003_241857_243866 593
29 3300047472 Ga0495686_0023243 Ga0495686_0023243_1046_2986 594
30 iso_pu_bacteria 2791355048 2792461690 596
31 iso_pu_bacteria 2843744320 2843745947 596
32 iso_pu_bacteria 2849560528 2849561697 596
33 iso_pu_bacteria 2849573788 2849577805 596
34 iso_pu_bacteria 2851153111 2851156724 596
35 3300013308 Ga0157375_10139770 Ga0157375_101397701 597
36 3300005295 Ga0065707_10089126 Ga0065707_100891264 599
37 3300049580 Ga0501046_0014455 Ga0501046_0014455_4435_6384 599
38 3300025940 Ga0207691_10106535 Ga0207691_101065352 601
39 3300053153 Ga0500616_0027732 Ga0500616_0027732_42_2021 605
40 3300041505 Ga0451849_1335290 Ga0451849_1335290_3062_5029 610
41 3300048919 Ga0496116_0052310 Ga0496116_0052310_120_2120 610
42 3300048920 Ga0496117_0061126 Ga0496117_0061126_478_2478 610
43 3300048921 Ga0496118_0064596 Ga0496118_0064596_122_2122 610
44 3300048925 Ga0496122_0070961 Ga0496122_0070961_367_2367 610
45 3300048926 Ga0496123_0049759 Ga0496123_0049759_699_2699 610
46 3300046507 Ga0495606_0001889 Ga0495606_0001889_1066_3108 611
47 3300046694 Ga0495649_0004446 Ga0495649_0004446_1069_3111 611
48 iso_pu_bacteria 2508501071 2508851123 611
49 3300053116 Ga0500592_000025 Ga0500592_000025_23297_25336 612
50 3300053158 Ga0500627_0000169 Ga0500627_0000169_13787_15826 612
51 3300046794 Ga0495589_0000002 Ga0495589_0000002_688175_690130 613
52 3300009011 Ga0105251_10032653 Ga0105251_100326531 614
53 3300009036 Ga0105244_10041821 Ga0105244_100418212 614
54 3300009092 Ga0105250_10019357 Ga0105250_100193572 614
55 3300013306 Ga0163162_10160854 Ga0163162_101608542 614
56 3300025711 Ga0207696_1003998 Ga0207696_10039984 614
57 3300046501 Ga0495607_0030481 Ga0495607_0030481_1095_3059 614
58 3300048922 Ga0496119_0000579 Ga0496119_0000579_42132_44102 614
59 3300048923 Ga0496120_0000501 Ga0496120_0000501_22749_24719 614
60 3300048927 Ga0496124_0000039 Ga0496124_0000039_173060_175030 614
61 3300025291 Ga0209675_1000989 Ga0209675_100098917 615
62 3300046512 Ga0495610_0032390 Ga0495610_0032390_167_2209 615
63 3300046616 Ga0495668_0037856 Ga0495668_0037856_98_2179 615
64 3300047320 Ga0495672_0024089 Ga0495672_0024089_637_2679 615
65 3300046528 Ga0495642_0001762 Ga0495642_0001762_670_2712 616
66 3300046474 Ga0495605_0014699 Ga0495605_0014699_616_2658 617
67 3300046513 Ga0495616_0035407 Ga0495616_0035407_480_2477 617
68 3300044673 Ga0453683_0002226 Ga0453683_0002226_11462_13444 618
69 3300046460 Ga0495638_0040969 Ga0495638_0040969_683_2680 618
70 3300046524 Ga0495648_0047084 Ga0495648_0047084_120_2117 618
71 3300046648 Ga0495611_0031112 Ga0495611_0031112_125_2122 618
72 3300046692 Ga0495671_0028343 Ga0495671_0028343_251_2248 618
73 3300047323 Ga0495683_0036788 Ga0495683_0036788_32_2029 618
74 3300047469 Ga0495673_0034256 Ga0495673_0034256_124_2121 618
75 3300009011 Ga0105251_10035350 Ga0105251_100353502 619
76 3300009092 Ga0105250_10025004 Ga0105250_100250041 619
77 3300025711 Ga0207696_1009378 Ga0207696_10093782 619
78 3300025735 Ga0207713_1002574 Ga0207713_10025742 619
79 3300044712 Ga0453684_0009342 Ga0453684_0009342_3922_5895 619
80 iso_pu_bacteria 2842805378 2842808685 619
81 3300046458 Ga0495591_017183 Ga0495591_017183_114_2195 620
82 3300046507 Ga0495606_0057267 Ga0495606_0057267_321_2402 620
83 3300013104 Ga0157370_10000901 Ga0157370_100009016 621
84 3300015261 Ga0182006_1011424 Ga0182006_10114242 621
85 3300046512 Ga0495610_0034054 Ga0495610_0034054_149_2230 622
86 3300047446 Ga0495679_017604 Ga0495679_017604_98_2179 622
87 3300046457 Ga0495590_0003887 Ga0495590_0003887_3546_5588 623
88 3300046492 Ga0495585_0039105 Ga0495585_0039105_556_2553 623
89 3300042124 Ga0450922_000629 Ga0450922_000629_693_2735 624
90 3300047320 Ga0495672_0055271 Ga0495672_0055271_265_2307 624
91 3300014968 Ga0157379_10015997 Ga0157379_100159974 626
92 3300048905 Ga0496102_0143792 Ga0496102_0143792_161_2179 626
93 3300048917 Ga0496114_0008254 Ga0496114_0008254_5479_7497 626
94 3300048907 Ga0496104_0122101 Ga0496104_0122101_198_2207 627
95 3300006946 Ga0079104_1000424 Ga0079104_10004242 628
96 3300027111 Ga0209281_1000016 Ga0209281_1000016348 628
97 3300042532 Ga0450893_0003353 Ga0450893_0003353_73_2073 628
98 3300009036 Ga0105244_10016579 Ga0105244_100165792 629
99 3300026089 Ga0207648_10013580 Ga0207648_100135806 629
100 3300046458 Ga0495591_010387 Ga0495591_010387_946_2943 629
101 3300046491 Ga0495584_0015821 Ga0495584_0015821_1295_3292 629
102 3300046507 Ga0495606_0030283 Ga0495606_0030283_1134_3131 629
103 3300046512 Ga0495610_0024523 Ga0495610_0024523_751_2748 629
104 3300046515 Ga0495620_0026356 Ga0495620_0026356_192_2189 629
105 3300046519 Ga0495632_0039949 Ga0495632_0039949_237_2234 629
106 3300046520 Ga0495637_0016286 Ga0495637_0016286_543_2540 629
107 3300046524 Ga0495648_0017448 Ga0495648_0017448_2109_4106 629
108 3300046694 Ga0495649_0021754 Ga0495649_0021754_527_2524 629
109 3300046794 Ga0495589_0030111 Ga0495589_0030111_493_2490 629
110 3300047323 Ga0495683_0019830 Ga0495683_0019830_1000_2997 629
111 3300047470 Ga0495681_0031293 Ga0495681_0031293_172_2169 629
112 3300013104 Ga0157370_10124662 Ga0157370_101246622 630
113 3300048906 Ga0496103_0064996 Ga0496103_0064996_30_2069 630
114 3300048912 Ga0496109_0027621 Ga0496109_0027621_2446_4485 630
115 3300046515 Ga0495620_0028696 Ga0495620_0028696_228_2213 631
116 3300046684 Ga0495669_0026640 Ga0495669_0026640_114_2156 631
117 3300006058 Ga0075432_10018730 Ga0075432_100187301 632
118 3300046463 Ga0495653_0027220 Ga0495653_0027220_1483_3483 632
119 3300046642 Ga0495634_0068580 Ga0495634_0068580_121_2121 632
120 3300046690 Ga0495624_0017295 Ga0495624_0017295_1347_3347 632
121 3300047320 Ga0495672_0032317 Ga0495672_0032317_1103_3103 632
122 3300047470 Ga0495681_0020862 Ga0495681_0020862_988_3030 632
123 3300047470 Ga0495681_0034697 Ga0495681_0034697_399_2384 632
124 3300047673 Ga0495593_0021855 Ga0495593_0021855_176_2176 632
125 3300013307 Ga0157372_10082796 Ga0157372_100827962 633
126 3300014497 Ga0182008_10021955 Ga0182008_100219552 633
127 3300015261 Ga0182006_1021411 Ga0182006_10214112 633
128 3300025728 Ga0207655_1004304 Ga0207655_10043049 633
129 3300046460 Ga0495638_0055390 Ga0495638_0055390_364_2361 633
130 3300046492 Ga0495585_0039961 Ga0495585_0039961_524_2521 633
131 3300048919 Ga0496116_0054145 Ga0496116_0054145_525_2525 633
132 3300048920 Ga0496117_0045340 Ga0496117_0045340_1130_3130 633
133 3300048921 Ga0496118_0052419 Ga0496118_0052419_1065_3065 633
134 3300048924 Ga0496121_0075988 Ga0496121_0075988_131_2131 633
135 3300048928 Ga0496125_0090547 Ga0496125_0090547_103_2103 633
136 3300009011 Ga0105251_10010952 Ga0105251_100109522 634
137 3300009092 Ga0105250_10014295 Ga0105250_100142952 634
138 3300009092 Ga0105250_10018440 Ga0105250_100184402 634
139 3300025298 Ga0209050_1011285 Ga0209050_10112852 634
140 3300025711 Ga0207696_1000031 Ga0207696_1000031270 634
141 3300025735 Ga0207713_1010199 Ga0207713_10101992 634
142 3300046507 Ga0495606_0040429 Ga0495606_0040429_711_2714 635
143 3300046453 Ga0495627_014123 Ga0495627_014123_291_2288 636
144 3300046458 Ga0495591_004074 Ga0495591_004074_5132_7129 636
145 3300046474 Ga0495605_0025231 Ga0495605_0025231_544_2541 636
146 3300046501 Ga0495607_0048016 Ga0495607_0048016_100_2097 636
147 3300046513 Ga0495616_0024579 Ga0495616_0024579_139_2136 636
148 3300046515 Ga0495620_0027050 Ga0495620_0027050_325_2322 636
149 3300046519 Ga0495632_0032314 Ga0495632_0032314_457_2454 636
150 3300046530 Ga0495654_0012519 Ga0495654_0012519_1221_3218 636
151 3300046660 Ga0495625_0027333 Ga0495625_0027333_1249_3246 636
152 3300046692 Ga0495671_0031986 Ga0495671_0031986_246_2243 636
153 3300046694 Ga0495649_0018307 Ga0495649_0018307_1026_3023 636
154 3300047446 Ga0495679_015104 Ga0495679_015104_391_2388 636
155 3300047469 Ga0495673_0007047 Ga0495673_0007047_3939_5936 636
156 3300048091 Ga0495626_0021054 Ga0495626_0021054_1111_3108 636
157 3300049459 Ga0495678_014077 Ga0495678_014077_526_2523 636
158 3300014497 Ga0182008_10028038 Ga0182008_100280382 640
159 3300042006 Ga0439432_015531 Ga0439432_015531_474_2456 640
160 iso_pu_bacteria 8056172158 8056177374 642
161 iso_pu_bacteria 2511231008 2511275056 643
162 iso_pu_bacteria 2511231010 2511288496 643
163 iso_pu_bacteria 2511231011 2511297993 643
164 iso_pu_bacteria 2511231023 2511368998 643
165 iso_pu_bacteria 2600255318 2601798527 643
166 iso_pu_bacteria 2603880185 2606077421 643
167 iso_pu_bacteria 2603880199 2606129333 643
168 iso_pu_bacteria 2643221589 2643955597 643
169 iso_pu_bacteria 2643221602 2644020391 643
170 iso_pu_bacteria 2713897149 2715754815 643
171 iso_pu_bacteria 2773857673 2774135530 643
172 iso_pu_bacteria 2784132063 2784261779 643
173 iso_pu_bacteria 2808606377 2808928407 643
174 iso_pu_bacteria 2808606381 2808950410 643
175 iso_pu_bacteria 2852657418 2852659715 643
176 iso_pu_bacteria 2878029506 2878035386 643
177 iso_pu_bacteria 2880230671 2880236033 643
178 iso_pu_bacteria 2904518522 2904518921 643
179 iso_pu_bacteria 2919456309 2919457586 643
180 iso_pu_bacteria 3007718800 3007721793 643
181 iso_pu_bacteria 8056569372 8056570501 643
182 3300009011 Ga0105251_10000009 Ga0105251_10000009127 645
183 3300009092 Ga0105250_10001636 Ga0105250_100016362 645
184 3300009092 Ga0105250_10014859 Ga0105250_100148592 645
185 3300025711 Ga0207696_1000020 Ga0207696_1000020242 645
186 3300025735 Ga0207713_1000032 Ga0207713_1000032134 645
187 3300003323 rootH1_10158617 rootH1_101586172 647
188 3300013104 Ga0157370_10110716 Ga0157370_101107161 647
189 3300013306 Ga0163162_10058293 Ga0163162_100582932 647
190 3300041405 Ga0439438_013921 Ga0439438_013921_264_2264 647
191 3300041407 Ga0439447_006764 Ga0439447_006764_1060_3060 647
192 3300041411 Ga0439466_0019570 Ga0439466_0019570_79_2079 647
193 3300042009 Ga0439451_004724 Ga0439451_004724_375_2375 647
194 3300042013 Ga0439456_005679 Ga0439456_005679_267_2267 647
195 3300042142 Ga0450905_001839 Ga0450905_001839_230_2230 647
196 3300046475 Ga0495639_0021417 Ga0495639_0021417_466_2469 647
197 3300046499 Ga0495594_0032003 Ga0495594_0032003_278_2281 647
198 3300046501 Ga0495607_0044585 Ga0495607_0044585_211_2214 647
199 3300046512 Ga0495610_0023344 Ga0495610_0023344_379_2382 647
200 3300046515 Ga0495620_0023715 Ga0495620_0023715_337_2340 647
201 3300046518 Ga0495631_0003022 Ga0495631_0003022_6663_8666 647
202 3300046519 Ga0495632_0033123 Ga0495632_0033123_401_2398 647
203 3300046520 Ga0495637_0006736 Ga0495637_0006736_887_2884 647
204 3300046520 Ga0495637_0024837 Ga0495637_0024837_562_2565 647
205 3300046524 Ga0495648_0051286 Ga0495648_0051286_418_2421 647
206 3300046530 Ga0495654_0034244 Ga0495654_0034244_128_2131 647
207 3300046530 Ga0495654_0036356 Ga0495654_0036356_382_2385 647
208 3300046538 Ga0495609_0027526 Ga0495609_0027526_231_2234 647
209 3300046542 Ga0495597_0032659 Ga0495597_0032659_297_2294 647
210 3300046660 Ga0495625_0043215 Ga0495625_0043215_959_2962 647
211 3300046665 Ga0495661_0040402 Ga0495661_0040402_391_2394 647
212 3300046689 Ga0495613_0083653 Ga0495613_0083653_216_2213 647
213 3300046692 Ga0495671_0035785 Ga0495671_0035785_482_2485 647
214 3300046694 Ga0495649_0041969 Ga0495649_0041969_397_2394 647
215 3300046794 Ga0495589_0035485 Ga0495589_0035485_73_2070 647
216 3300046810 Ga0495660_0033377 Ga0495660_0033377_229_2232 647
217 3300047323 Ga0495683_0006131 Ga0495683_0006131_3963_5966 647
218 3300047469 Ga0495673_0015602 Ga0495673_0015602_639_2639 647
219 3300047470 Ga0495681_0025251 Ga0495681_0025251_579_2582 647
220 3300047470 Ga0495681_0036735 Ga0495681_0036735_196_2199 647
221 3300048924 Ga0496121_0101882 Ga0496121_0101882_111_2114 647
222 3300048927 Ga0496124_0083853 Ga0496124_0083853_263_2266 647
223 3300048928 Ga0496125_0054432 Ga0496125_0054432_252_2255 647
224 3300048928 Ga0496125_0080223 Ga0496125_0080223_482_2485 647
225 3300048929 Ga0496126_0064299 Ga0496126_0064299_754_2757 647
226 iso_pu_bacteria 2511231012 2511303996 647
227 iso_pu_bacteria 2511231020 2511349522 647
228 iso_pu_bacteria 2818991456 2819655169 647
229 iso_pu_bacteria 2939636861 2939640770 647
230 iso_pu_bacteria 3007614139 3007618871 647

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01757

Acyl_transf_3

Acyltransferase family

61

385

0.91

PF19040

SGNH

SGNH domain (fused to AT3 domains)

450

699

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ppy-assembly2.cif.gz_C-2 crystal structure of a putative acylhydrolase (bf3764) from bacteroides fragilis nctc 9343 at 2.00 a resolution 0.7264 394 633
7trr-assembly1.cif.gz_A structure of neisseria gonorrhoeae peptidoglycan o-acetyltransferase b (patb) with methylsulfonyl adduct 0.7176 401 625
7tlv-assembly1.cif.gz_A structure of neisseria gonorrhoeae peptidoglycan o-acetyltransferase b (patb) substituted with selenomethionine 0.7112 401 625
6se1-assembly1.cif.gz_A structure of salmonella ser. paratyphi a lipopolysaccharide acetyltransferase periplasmic domain 0.7056 360 630
4rsh-assembly3.cif.gz_C structure of a putative lipolytic protein of g-d-s-l family from desulfitobacterium hafniense dcb-2 0.7044 402 627
ID Description Score Start End Superfamily
af_Q5F4V4_418_638_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7802 392 628 3.40.50.1110
af_Q5F4V4_418_638_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.774 392 628 3.40.50.1110
af_O16269_364_650_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7522 391 635 3.40.50.1110
af_O16467_341_658_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.7121 341 641 3.40.50.1110
af_O53633_460_681_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.6912 396 627 3.40.50.1110
ID Description Score Start End GO Terms
AF-A0A0M1JKK3-F1-model_v4 Acyltransferase 0.9742 6 340 GO:0009103
GO:0016020
GO:0016747
AF-A0A2G8MQH2-F1-model_v4 deleted 0.9717 2 258
AF-A0A3B9VIC9-F1-model_v4 Acyltransferase 0.9663 5 212 GO:0009103
GO:0016020
GO:0016747
AF-A0A258BVU4-F1-model_v4 Acyltransferase 3 domain-containing protein 0.9596 2 248 GO:0009103
GO:0016020
GO:0016747
AF-A0A7K0TZZ6-F1-model_v4 Acyltransferase family protein 0.9573 1 345 GO:0009103
GO:0016020
GO:0016747

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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