F344818

General Info

Members Datasets Scaffolds Average Seq Length
232 154 464 765

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100028652|Ga0070706_1000286524
Length 788
Sequence MKPVSEEQSVPEQPPPWTGPAATSERAVPLDLPGFLTREHHRIHLVGVAGSGMSGIAALLIELGHAVSGSDKVSTMETDRLQRLGLRFREQHRPEEAGTADLIVFSSAIKNDNPILVSARNYGKPIVRRAEALAAIMRSRRGIVIAGMHGKTTTSAMTAHVLREGGLHPCHYVGAEIPILGTNAHWDSRAEYFVAEGDESDGTIALFQPEHTLILNIEEEHLDFYADLDAIEKVFAQLITQTTGTVFYNLDDKNAARVCRSLARGISYGFADEADYRAVDIRLMGFASTFRVDHRGQDLGEAVLNVPGQHNVHNALGVIALASELGVAFEKIAKSLAKFEHARRRFEIKYDSPRFLLVDDYGHHPTEIRATLKAARSVGRKRVLTMFQPHRYSRTKALRKEFGRAFDDADRVVVTDVYGSSEAPIPGVTGQIVVDEIVGHGHRSVSYEPRLEWVHRVVGNILESGDLVLSLGAGNIHEQLSALAADLVIAEKLKEIVGEGGDVRLYEPLSKHTTLRVGGPAQFWVEPRTEEAFAGLIRFCRDEDLPLFVMGRGSNLLVRDGGVRGVVVHPCGGDFDKIEVNGDEITAGVGAKLKEVAYAGKAAGIGGMEWMEGIPGAVGGGLRMNAGAMGAQTFENVVRVRYLDANGEAHTKSRDELEVHYRDFSLLKKNFAVSAVFRGQPAPLEEIVRKLEASQDKRRASQPAAKSAGCIFKNPDSCPAGKLVDELGLKNAHVGKARVSEVHGNFIVNDGGATAAEMLELIEKIKATALAKRGIELETEVQIVGEPG

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
4 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
30 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
100 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
101 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
111 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
114 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
122 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
123 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
154 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.86
Nodule 0
Rhizoplane 7.76
Rhizosphere 87.07
Stem 0
Stem Tuber 0
Unclassified 0.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100028652 3300005467 Bacteria 5128
2 CNXas_1000034 3300000545 Bacteria 28990
3 JGI24743J22301_10000044 3300001991 Bacteria 11132
4 JGI24033J26618_1000066 3300002155 Bacteria 15346
5 JGI25406J46586_10000002 3300003203 Bacteria 202415
6 rootH2_10011145 3300003320 Bacteria 22144
7 rootH1_10001752 3300003323 Bacteria 14969
8 Ga0065712_10008781 3300005290 Bacteria 4140
9 Ga0065715_10002858 3300005293 Bacteria 8746
10 Ga0065707_10003406 3300005295 Bacteria 11705
11 Ga0070676_10001419 3300005328 Bacteria 12100
12 Ga0070683_100013801 3300005329 Bacteria 7053
13 Ga0070670_100028061 3300005331 Bacteria 4843
14 Ga0070670_100061429 3300005331 Bacteria 3225
15 Ga0070666_10049824 3300005335 Bacteria 2816
16 Ga0068868_100019130 3300005338 Bacteria 5129
17 Ga0070660_100010659 3300005339 Bacteria 6502
18 Ga0070689_100009358 3300005340 Bacteria 6943
19 Ga0070687_100002579 3300005343 Bacteria 6833
20 Ga0070661_100000479 3300005344 Bacteria 30510
21 Ga0070661_100017032 3300005344 Bacteria 5149
22 Ga0070668_100002801 3300005347 Bacteria 12829
23 Ga0070669_100003642 3300005353 Bacteria 11111
24 Ga0070675_100002080 3300005354 Bacteria 14811
25 Ga0070675_100005525 3300005354 Bacteria 9676
26 Ga0070675_100013175 3300005354 Bacteria 6497
27 Ga0070671_100036377 3300005355 Bacteria 4083
28 Ga0070674_100003465 3300005356 Bacteria 8860
29 Ga0070688_100012161 3300005365 Bacteria 4813
30 Ga0070667_100011964 3300005367 Bacteria 7179
31 Ga0070667_100016903 3300005367 Bacteria 6037
32 Ga0070714_100020315 3300005435 Bacteria 5421
33 Ga0070713_100021743 3300005436 Bacteria 4942
34 Ga0070710_10007997 3300005437 Bacteria 5140
35 Ga0070711_100067475 3300005439 Bacteria 2510
36 Ga0070708_100002835 3300005445 Bacteria 13466
37 Ga0070708_100013589 3300005445 Bacteria 6673
38 Ga0070708_100038756 3300005445 Bacteria 4166
39 Ga0070662_100003227 3300005457 Bacteria 10137
40 Ga0070662_100055711 3300005457 Bacteria 2869
41 Ga0070706_100000072 3300005467 Bacteria 117347
42 Ga0070706_100006760 3300005467 Bacteria 10830
43 Ga0070706_100013428 3300005467 Bacteria 7572
44 Ga0070706_100036970 3300005467 Bacteria 4510
45 Ga0070707_100008581 3300005468 Bacteria 9495
46 Ga0070707_100016930 3300005468 Bacteria 6848
47 Ga0070707_100021256 3300005468 Bacteria 6134
48 Ga0070707_100037631 3300005468 Bacteria 4618
49 Ga0070698_100002050 3300005471 Bacteria 22388
50 Ga0070698_100002781 3300005471 Bacteria 19252
51 Ga0070698_100009880 3300005471 Bacteria 10202
52 Ga0070699_100026278 3300005518 Bacteria 5021
53 Ga0070699_100032130 3300005518 Bacteria 4533
54 Ga0070684_100000339 3300005535 Bacteria 32322
55 Ga0070697_100000972 3300005536 Bacteria 21638
56 Ga0070697_100003517 3300005536 Bacteria 12036
57 Ga0070697_100003586 3300005536 Bacteria 11929
58 Ga0070697_100004257 3300005536 Bacteria 10971
59 Ga0070697_100010931 3300005536 Bacteria 7090
60 Ga0070697_100012199 3300005536 Bacteria 6730
61 Ga0070697_100014655 3300005536 Bacteria 6155
62 Ga0068853_100000007 3300005539 Bacteria 283307
63 Ga0070695_100017423 3300005545 Bacteria 4356
64 Ga0070665_100000005 3300005548 Bacteria 734905
65 Ga0070665_100013354 3300005548 Bacteria 8267
66 Ga0070704_100000846 3300005549 Bacteria 15252
67 Ga0068856_100000537 3300005614 Bacteria 41817
68 Ga0068859_100022585 3300005617 Bacteria 6309
69 Ga0068863_100003908 3300005841 Bacteria 14717
70 Ga0068863_100014311 3300005841 Bacteria 7642
71 Ga0068858_100009463 3300005842 Bacteria 9295
72 Ga0081455_10001013 3300005937 Bacteria 35565
73 Ga0081455_10001733 3300005937 Bacteria 26391
74 Ga0081455_10067801 3300005937 Bacteria 2972
75 Ga0081540_1000219 3300005983 Bacteria 60720
76 Ga0081539_10000061 3300005985 Bacteria 250890
77 Ga0081539_10002662 3300005985 Bacteria 24317
78 Ga0081539_10005093 3300005985 Bacteria 13767
79 Ga0070717_10003198 3300006028 Bacteria 11701
80 Ga0070717_10004539 3300006028 Bacteria 10039
81 Ga0070715_10017365 3300006163 Bacteria 2723
82 Ga0070712_100006123 3300006175 Bacteria 7444
83 Ga0070712_100037521 3300006175 Bacteria 3304
84 Ga0097621_100021086 3300006237 Bacteria 5032
85 Ga0068871_100011771 3300006358 Bacteria 6429
86 Ga0097620_100022585 3300006931 Bacteria 6309
87 Ga0105240_10079006 3300009093 Unclassified 4050
88 Ga0114129_10008097 3300009147 Bacteria 14978
89 Ga0105249_10007377 3300009553 Bacteria 9591
90 Ga0105239_10005383 3300010375 Bacteria 15034
91 Ga0157378_10000857 3300013297 Bacteria 28196
92 Ga0163162_10004036 3300013306 Bacteria 14087
93 Ga0163162_10005848 3300013306 Bacteria 11898
94 Ga0163162_10010219 3300013306 Bacteria 9118
95 Ga0163162_10061200 3300013306 Bacteria 3802
96 Ga0157372_10014289 3300013307 Bacteria 8489
97 Ga0157375_10001835 3300013308 Bacteria 18250
98 Ga0157375_10069070 3300013308 Bacteria 3538
99 Ga0157377_10016923 3300014745 Bacteria 3761
100 Ga0157379_10001744 3300014968 Bacteria 17985
101 Ga0163161_10002616 3300017792 Bacteria 12815
102 Ga0163161_10064683 3300017792 Bacteria 2668
103 Ga0213872_10000551 3300021361 Bacteria 29074
104 Ga0213872_10012166 3300021361 Bacteria 4057
105 Ga0213876_10021735 3300021384 Unclassified 3394
106 Ga0207697_10000151 3300025315 Bacteria 34208
107 Ga0207697_10000198 3300025315 Bacteria 32108
108 Ga0207697_10001147 3300025315 Bacteria 14579
109 Ga0207697_10006063 3300025315 Bacteria 5526
110 Ga0207697_10014861 3300025315 Bacteria 3224
111 Ga0207688_10002615 3300025901 Bacteria 9749
112 Ga0207680_10027449 3300025903 Bacteria 3170
113 Ga0207647_10002927 3300025904 Bacteria 12853
114 Ga0207645_10000634 3300025907 Bacteria 29170
115 Ga0207645_10004095 3300025907 Bacteria 10849
116 Ga0207645_10004666 3300025907 Bacteria 10094
117 Ga0207684_10000043 3300025910 Bacteria 259939
118 Ga0207684_10004711 3300025910 Bacteria 12793
119 Ga0207684_10015099 3300025910 Bacteria 6648
120 Ga0207684_10078547 3300025910 Bacteria 2807
121 Ga0207695_10007538 3300025913 Bacteria 13794
122 Ga0207693_10004670 3300025915 Bacteria 11541
123 Ga0207693_10008051 3300025915 Bacteria 8651
124 Ga0207663_10003000 3300025916 Bacteria 8173
125 Ga0207663_10017712 3300025916 Bacteria 3977
126 Ga0207662_10005639 3300025918 Bacteria 6694
127 Ga0207649_10000427 3300025920 Bacteria 30819
128 Ga0207646_10006659 3300025922 Bacteria 11907
129 Ga0207646_10012717 3300025922 Bacteria 8076
130 Ga0207681_10014018 3300025923 Bacteria 4969
131 Ga0207659_10004109 3300025926 Bacteria 8783
132 Ga0207659_10019633 3300025926 Bacteria 4452
133 Ga0207659_10039677 3300025926 Bacteria 3286
134 Ga0207700_10002264 3300025928 Bacteria 11048
135 Ga0207700_10016176 3300025928 Bacteria 4947
136 Ga0207700_10037761 3300025928 Bacteria 3501
137 Ga0207644_10006288 3300025931 Bacteria 7735
138 Ga0207644_10006455 3300025931 Bacteria 7643
139 Ga0207690_10007503 3300025932 Bacteria 6473
140 Ga0207690_10031516 3300025932 Bacteria 3393
141 Ga0207706_10000702 3300025933 Bacteria 35016
142 Ga0207706_10005196 3300025933 Bacteria 12147
143 Ga0207706_10008416 3300025933 Bacteria 9519
144 Ga0207670_10020724 3300025936 Bacteria 4044
145 Ga0207665_10015535 3300025939 Bacteria 4997
146 Ga0207665_10047121 3300025939 Bacteria 2889
147 Ga0207691_10002095 3300025940 Bacteria 19497
148 Ga0207691_10041100 3300025940 Bacteria 4271
149 Ga0207668_10006913 3300025972 Bacteria 6731
150 Ga0207658_10008718 3300025986 Bacteria 6889
151 Ga0207677_10009472 3300026023 Bacteria 5482
152 Ga0207639_10000001 3300026041 Bacteria 1431562
153 Ga0207702_10003806 3300026078 Bacteria 13620
154 Ga0207641_10001243 3300026088 Bacteria 25436
155 Ga0207683_10003358 3300026121 Bacteria 13946
156 Ga0209974_10013027 3300027876 Bacteria 2774
157 Ga0268266_10000012 3300028379 Bacteria 734912
158 Ga0268264_10064209 3300028381 Bacteria 3089
159 Ga0307511_10000129 3300030521 Bacteria 68792
160 Ga0265320_10011323 3300031240 Bacteria 5253
161 Ga0373951_0005766 3300035091 Bacteria 2864
162 Ga0373947_0018552 3300035725 Bacteria 4006
163 Ga0373937_0001540 3300036401 Bacteria 19390
164 Ga0395899_0000015 3300037312 Bacteria 470061
165 Ga0395900_0042222 3300037418 Bacteria 4698
166 Ga0395900_0047728 3300037418 Bacteria 4411
167 Ga0395898_0000051 3300037466 Bacteria 281872
168 Ga0436364_1380676 3300037853 Bacteria 4648
169 Ga0395901_0018296 3300038443 Bacteria 7153
170 Ga0436365_0539406 3300039437 Bacteria 56073
171 Ga0436365_0843245 3300039437 Bacteria 6554
172 Ga0436360_0602887 3300039438 Bacteria 3538
173 Ga0436360_0660138 3300039438 Bacteria 8615
174 Ga0436361_0118679 3300039447 Bacteria 26161
175 Ga0436361_0819850 3300039447 Bacteria 4680
176 Ga0436361_0890542 3300039447 Bacteria 2880
177 Ga0436361_0994023 3300039447 Bacteria 6975
178 Ga0436363_1312924 3300039450 Bacteria 7924
179 Ga0466965_0007338 3300044683 Bacteria 5056
180 Ga0466971_0000025 3300044719 Bacteria 62833
181 Ga0466957_0004581 3300044842 Bacteria 7723
182 Ga0451576_0019910 3300045051 Bacteria 7315
183 Ga0466967_0052694 3300045976 Bacteria 3573
184 Ga0495592_0027986 3300046454 Bacteria 4269
185 Ga0495651_0004539 3300046462 Bacteria 10616
186 Ga0495645_0010305 3300046543 Bacteria 6552
187 Ga0495623_0040071 3300046679 Bacteria 2992
188 Ga0495646_0003991 3300046680 Bacteria 9239
189 Ga0495604_0045847 3300047317 Bacteria 3410
190 Ga0495674_0074873 3300047319 Bacteria 2914
191 Ga0495674_0091093 3300047319 Bacteria 2605
192 Ga0495675_0004714 3300047444 Bacteria 8282
193 Ga0495675_0027915 3300047444 Bacteria 3597
194 Ga0495684_0028204 3300047471 Bacteria 4310
195 Ga0496101_0001708 3300048904 Bacteria 13133
196 Ga0496102_0062542 3300048905 Bacteria 3408
197 Ga0496104_0008942 3300048907 Bacteria 8902
198 Ga0496104_0088145 3300048907 Bacteria 2964
199 Ga0496105_0019035 3300048908 Bacteria 5533
200 Ga0496106_0003012 3300048909 Bacteria 12548
201 Ga0496106_0030455 3300048909 Bacteria 4024
202 Ga0496107_0001726 3300048910 Bacteria 13718
203 Ga0496108_0028411 3300048911 Bacteria 4627
204 Ga0496110_0014415 3300048913 Bacteria 6563
205 Ga0496110_0027035 3300048913 Bacteria 4916
206 Ga0496112_0005693 3300048915 Bacteria 10824
207 Ga0496112_0023801 3300048915 Bacteria 5858
208 Ga0496113_0005338 3300048916 Bacteria 8004
209 Ga0496114_0013171 3300048917 Bacteria 6629
210 Ga0496115_0000424 3300048918 Bacteria 34503
211 Ga0496115_0004076 3300048918 Bacteria 10555
212 Ga0496115_0018467 3300048918 Bacteria 5354
213 Ga0496125_0000029 3300048928 Bacteria 382675
214 Ga0501031_0000968 3300049568 Bacteria 17427
215 Ga0501032_0000504 3300049569 Bacteria 31645
216 Ga0501033_0000003 3300049570 Bacteria 586973
217 Ga0501033_0000083 3300049570 Bacteria 89452
218 Ga0501037_0000083 3300049573 Bacteria 86322
219 Ga0501038_0000329 3300049574 Bacteria 40955
220 Ga0501038_0022409 3300049574 Bacteria 5661
221 Ga0501038_0032868 3300049574 Bacteria 4572
222 Ga0501039_0002998 3300049575 Bacteria 12619
223 Ga0501043_0002418 3300049579 Bacteria 15801
224 Ga0501043_0017594 3300049579 Bacteria 5604
225 Ga0501047_0002692 3300049581 Bacteria 16920
226 Ga0501070_0005200 3300049586 Bacteria 11088
227 Ga0501035_0000001 3300049822 Bacteria 1037138
228 Ga0501044_0000159 3300049823 Bacteria 83639
229 Ga0500556_0003471 3300053104 Bacteria 4631
230 Ga0500616_0016183 3300053153 Bacteria 4251
231 Ga0466962_0000153 3300061719 Bacteria 28888
232 2787508617 2786546548 Bacteria 4745694
233 Ga0070706_100028652
234 CNXas_1000034
235 JGI24743J22301_10000044
236 JGI24033J26618_1000066
237 JGI25406J46586_10000002
238 rootH2_10011145
239 rootH1_10001752
240 Ga0065712_10008781
241 Ga0065715_10002858
242 Ga0065707_10003406
243 Ga0070676_10001419
244 Ga0070683_100013801
245 Ga0070670_100028061
246 Ga0070670_100061429
247 Ga0070666_10049824
248 Ga0068868_100019130
249 Ga0070660_100010659
250 Ga0070689_100009358
251 Ga0070687_100002579
252 Ga0070661_100000479
253 Ga0070661_100017032
254 Ga0070668_100002801
255 Ga0070669_100003642
256 Ga0070675_100002080
257 Ga0070675_100005525
258 Ga0070675_100013175
259 Ga0070671_100036377
260 Ga0070674_100003465
261 Ga0070688_100012161
262 Ga0070667_100011964
263 Ga0070667_100016903
264 Ga0070714_100020315
265 Ga0070713_100021743
266 Ga0070710_10007997
267 Ga0070711_100067475
268 Ga0070708_100002835
269 Ga0070708_100013589
270 Ga0070708_100038756
271 Ga0070662_100003227
272 Ga0070662_100055711
273 Ga0070706_100000072
274 Ga0070706_100006760
275 Ga0070706_100013428
276 Ga0070706_100036970
277 Ga0070707_100008581
278 Ga0070707_100016930
279 Ga0070707_100021256
280 Ga0070707_100037631
281 Ga0070698_100002050
282 Ga0070698_100002781
283 Ga0070698_100009880
284 Ga0070699_100026278
285 Ga0070699_100032130
286 Ga0070684_100000339
287 Ga0070697_100000972
288 Ga0070697_100003517
289 Ga0070697_100003586
290 Ga0070697_100004257
291 Ga0070697_100010931
292 Ga0070697_100012199
293 Ga0070697_100014655
294 Ga0068853_100000007
295 Ga0070695_100017423
296 Ga0070665_100000005
297 Ga0070665_100013354
298 Ga0070704_100000846
299 Ga0068856_100000537
300 Ga0068859_100022585
301 Ga0068863_100003908
302 Ga0068863_100014311
303 Ga0068858_100009463
304 Ga0081455_10001013
305 Ga0081455_10001733
306 Ga0081455_10067801
307 Ga0081540_1000219
308 Ga0081539_10000061
309 Ga0081539_10002662
310 Ga0081539_10005093
311 Ga0070717_10003198
312 Ga0070717_10004539
313 Ga0070715_10017365
314 Ga0070712_100006123
315 Ga0070712_100037521
316 Ga0097621_100021086
317 Ga0068871_100011771
318 Ga0097620_100022585
319 Ga0105240_10079006
320 Ga0114129_10008097
321 Ga0105249_10007377
322 Ga0105239_10005383
323 Ga0157378_10000857
324 Ga0163162_10004036
325 Ga0163162_10005848
326 Ga0163162_10010219
327 Ga0163162_10061200
328 Ga0157372_10014289
329 Ga0157375_10001835
330 Ga0157375_10069070
331 Ga0157377_10016923
332 Ga0157379_10001744
333 Ga0163161_10002616
334 Ga0163161_10064683
335 Ga0213872_10000551
336 Ga0213872_10012166
337 Ga0213876_10021735
338 Ga0207697_10000151
339 Ga0207697_10000198
340 Ga0207697_10001147
341 Ga0207697_10006063
342 Ga0207697_10014861
343 Ga0207688_10002615
344 Ga0207680_10027449
345 Ga0207647_10002927
346 Ga0207645_10000634
347 Ga0207645_10004095
348 Ga0207645_10004666
349 Ga0207684_10000043
350 Ga0207684_10004711
351 Ga0207684_10015099
352 Ga0207684_10078547
353 Ga0207695_10007538
354 Ga0207693_10004670
355 Ga0207693_10008051
356 Ga0207663_10003000
357 Ga0207663_10017712
358 Ga0207662_10005639
359 Ga0207649_10000427
360 Ga0207646_10006659
361 Ga0207646_10012717
362 Ga0207681_10014018
363 Ga0207659_10004109
364 Ga0207659_10019633
365 Ga0207659_10039677
366 Ga0207700_10002264
367 Ga0207700_10016176
368 Ga0207700_10037761
369 Ga0207644_10006288
370 Ga0207644_10006455
371 Ga0207690_10007503
372 Ga0207690_10031516
373 Ga0207706_10000702
374 Ga0207706_10005196
375 Ga0207706_10008416
376 Ga0207670_10020724
377 Ga0207665_10015535
378 Ga0207665_10047121
379 Ga0207691_10002095
380 Ga0207691_10041100
381 Ga0207668_10006913
382 Ga0207658_10008718
383 Ga0207677_10009472
384 Ga0207639_10000001
385 Ga0207702_10003806
386 Ga0207641_10001243
387 Ga0207683_10003358
388 Ga0209974_10013027
389 Ga0268266_10000012
390 Ga0268264_10064209
391 Ga0307511_10000129
392 Ga0265320_10011323
393 Ga0373951_0005766
394 Ga0373947_0018552
395 Ga0373937_0001540
396 Ga0395899_0000015
397 Ga0395900_0042222
398 Ga0395900_0047728
399 Ga0395898_0000051
400 Ga0436364_1380676
401 Ga0395901_0018296
402 Ga0436365_0539406
403 Ga0436365_0843245
404 Ga0436360_0602887
405 Ga0436360_0660138
406 Ga0436361_0118679
407 Ga0436361_0819850
408 Ga0436361_0890542
409 Ga0436361_0994023
410 Ga0436363_1312924
411 Ga0466965_0007338
412 Ga0466971_0000025
413 Ga0466957_0004581
414 Ga0451576_0019910
415 Ga0466967_0052694
416 Ga0495592_0027986
417 Ga0495651_0004539
418 Ga0495645_0010305
419 Ga0495623_0040071
420 Ga0495646_0003991
421 Ga0495604_0045847
422 Ga0495674_0074873
423 Ga0495674_0091093
424 Ga0495675_0004714
425 Ga0495675_0027915
426 Ga0495684_0028204
427 Ga0496101_0001708
428 Ga0496102_0062542
429 Ga0496104_0008942
430 Ga0496104_0088145
431 Ga0496105_0019035
432 Ga0496106_0003012
433 Ga0496106_0030455
434 Ga0496107_0001726
435 Ga0496108_0028411
436 Ga0496110_0014415
437 Ga0496110_0027035
438 Ga0496112_0005693
439 Ga0496112_0023801
440 Ga0496113_0005338
441 Ga0496114_0013171
442 Ga0496115_0000424
443 Ga0496115_0004076
444 Ga0496115_0018467
445 Ga0496125_0000029
446 Ga0501031_0000968
447 Ga0501032_0000504
448 Ga0501033_0000003
449 Ga0501033_0000083
450 Ga0501037_0000083
451 Ga0501038_0000329
452 Ga0501038_0022409
453 Ga0501038_0032868
454 Ga0501039_0002998
455 Ga0501043_0002418
456 Ga0501043_0017594
457 Ga0501047_0002692
458 Ga0501070_0005200
459 Ga0501035_0000001
460 Ga0501044_0000159
461 Ga0500556_0003471
462 Ga0500616_0016183
463 Ga0466962_0000153
464 2787508617

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

42

141

0.96

PF02873

MurB_C

UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain

686

784

0.96

PF01565

FAD_binding_4

FAD binding domain

521

653

0.92

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

344

474

0.89

PF08245

Mur_ligase_M

Mur ligase middle domain

145

322

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1p3d-assembly2.cif.gz_B crystal structure of udp-n-acetylmuramic acid:l-alanine ligase (murc) in complex with uma and anp. 0.9481 15 462
6cau-assembly1.cif.gz_A udp-n-acetylmuramate--alanine ligase from acinetobacter baumannii ab5075-uw with amppnp 0.9417 15 319
2f00-assembly1.cif.gz_B escherichia coli murc 0.9388 9 462
4pyt-assembly1.cif.gz_A crystal structure of a murb family ep-udp-n-acetylglucosamine reductase 0.9333 465 763
1hsk-assembly1.cif.gz_A crystal structure of s. aureus murb 0.9301 464 764
ID Description Score Start End Superfamily
1gqqB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9666 21 104 3.40.50.720
3tx1A03 Alpha Beta;Alpha-Beta Complex;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1;UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 0.9656 686 765 3.90.78.10
af_P9WJL7_8_102_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9634 18 104 3.40.50.720
af_P17952_10_107_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9587 15 105 3.40.50.720
2f00B02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9448 108 319 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A7V9ZYG5-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase 0.9839 4 200 GO:0005524
GO:0009058
GO:0016881
AF-A0A7R9NG71-F1-model_v4 deleted 0.9798 18 95
AF-X1F496-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase C-terminal domain-containing protein 0.977 686 763 GO:0005829
GO:0008762
GO:0050660
GO:0071555
AF-A0A3D3RNP4-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) 0.972 18 250 GO:0005524
GO:0008763
GO:0009058
AF-A0A6G8PXB3-F1-model_v4 Mur ligase N-terminal catalytic domain-containing protein 0.972 19 106 GO:0009058
GO:0016881

Map