F345110

General Info

Members Datasets Scaffolds Average Seq Length
232 171 222 229

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10001062|Ga0207695_1000106238
Length 266
Sequence MRLSALDPPLYPLQVAKPPTLQAARRLTSRNQVKAMNTKENKKAVILVSGGMDSAVTIALAREQGYDVYALSVAYGQRHSAELEASDRVSRLLGAVAHKTVTVDLRSIGGSALTADIDVPLDTDQQADAATIPVTYVPARNTIMLSIALGWAEVLGSSDIWCGVNAVDYSGYPDCRPAFIEAFEQLANVATKAGVEGAGIRIHAPLMKMSKADIAREGARLNIDFSETVSCYQADAQGRACGHCDACRLRAQGFRDAGLPDPTRYV

Samples

Sample ID Description Type Environment
1 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
2 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
3 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
4 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
5 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
10 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
11 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
12 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
13 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
14 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
19 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
24 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
64 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
99 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
100 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
103 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
104 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
105 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
106 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
107 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
108 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
109 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
110 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
111 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
112 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
113 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
116 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
117 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
118 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
119 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
120 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
123 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
129 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
130 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
147 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
164 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
165 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
167 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
168 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
169 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
170 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
171 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.83
Metatranscriptomes 0.86
Isolates 4.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.34
Nodule 0
Rhizoplane 3.45
Rhizosphere 65.52
Stem 0
Stem Tuber 0
Unclassified 20.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000146 3300001989 Bacteria 22533
2 JGI24737J22298_10003278 3300001990 Bacteria 5737
3 JGI24738J21930_10004965 3300002075 Bacteria 3219
4 JGI25162J39368_1001103 3300002737 Bacteria 16377
5 JGI25162J39368_1001631 3300002737 Bacteria 11183
6 JGI25164J39214_1000581 3300002772 Bacteria 16386
7 JGI25164J39214_1000806 3300002772 Bacteria 11175
8 JGI25152J39213_1014457 3300002773 Bacteria 1600
9 JGI25151J46595_10000500 3300003187 Bacteria 36759
10 JGI25165J46597_1001569 3300003214 Bacteria 11199
11 JGI25165J46597_1001571 3300003214 Bacteria 11183
12 JGI25153J46596_10021116 3300003215 Bacteria 2436
13 rootH1_10003123 3300003316 Bacteria 3633
14 rootH2_10033365 3300003320 Bacteria 17513
15 rootH1_10107532 3300003323 Bacteria 17805
16 Ga0006562J51391_1010347 3300003578 Bacteria 5960
17 Ga0006562J51391_1010349 3300003578 Bacteria 7130
18 Ga0065165_1003511 3300005262 Bacteria 10878
19 Ga0070683_100008068 3300005329 Bacteria 8940
20 Ga0070666_10117651 3300005335 Bacteria 1841
21 Ga0070682_100004701 3300005337 Bacteria 7585
22 Ga0070687_100188046 3300005343 Bacteria 1242
23 Ga0070661_100061355 3300005344 Bacteria 2759
24 Ga0070661_100132984 3300005344 Bacteria 1870
25 Ga0070668_100018275 3300005347 Bacteria 5261
26 Ga0070669_100058637 3300005353 Bacteria 2826
27 Ga0070671_100146898 3300005355 Bacteria 1990
28 Ga0070659_100001569 3300005366 Bacteria 16461
29 Ga0070667_100011289 3300005367 Bacteria 7388
30 Ga0070705_100169193 3300005440 Bacteria 1469
31 Ga0070708_100005878 3300005445 Bacteria 9744
32 Ga0070708_100027031 3300005445 Bacteria 4919
33 Ga0070708_100339814 3300005445 Bacteria 1415
34 Ga0070681_10007523 3300005458 Bacteria 10644
35 Ga0068867_100602271 3300005459 Bacteria 958
36 Ga0070699_100057600 3300005518 Bacteria 3366
37 Ga0070699_100476077 3300005518 Bacteria 1133
38 Ga0070679_100317643 3300005530 Bacteria 1507
39 Ga0070697_100010540 3300005536 Bacteria 7216
40 Ga0070665_100000079 3300005548 Bacteria 186925
41 Ga0070665_100000195 3300005548 Bacteria 106493
42 Ga0070665_100000605 3300005548 Bacteria 49400
43 Ga0070665_100439891 3300005548 Bacteria 1313
44 Ga0068857_100000296 3300005577 Bacteria 34414
45 Ga0068857_100017581 3300005577 Bacteria 6270
46 Ga0068852_100009599 3300005616 Bacteria 7190
47 Ga0068863_100005849 3300005841 Bacteria 12051
48 Ga0068863_100009521 3300005841 Bacteria 9476
49 Ga0068858_100115377 3300005842 Bacteria 2509
50 Ga0068858_100125049 3300005842 Bacteria 2407
51 Ga0068860_100051035 3300005843 Bacteria 3937
52 Ga0068860_100400730 3300005843 Bacteria 1357
53 Ga0097621_100226261 3300006237 Bacteria 1632
54 Ga0075370_10006392 3300006353 Bacteria 5922
55 Ga0068871_100084425 3300006358 Bacteria 2635
56 Ga0075431_100311616 3300006847 Bacteria 1588
57 Ga0075436_100000350 3300006914 Bacteria 29446
58 Ga0099794_10022095 3300007265 Bacteria 2898
59 Ga0099794_10059863 3300007265 Bacteria 1848
60 Ga0099794_10067544 3300007265 Bacteria 1746
61 Ga0105251_10000534 3300009011 Bacteria 35913
62 Ga0105240_10001824 3300009093 Bacteria 35727
63 Ga0105240_10001947 3300009093 Bacteria 34195
64 Ga0105240_10029791 3300009093 Bacteria 7103
65 Ga0105240_11100753 3300009093 Bacteria 845
66 Ga0105247_10061898 3300009101 Bacteria 2321
67 Ga0105248_10004923 3300009177 Bacteria 14749
68 Ga0105237_10000084 3300009545 Bacteria 125742
69 Ga0105237_10048435 3300009545 Bacteria 4272
70 Ga0105238_10052568 3300009551 Bacteria 4095
71 Ga0105249_10250789 3300009553 Bacteria 1755
72 Ga0099796_10131151 3300010159 Bacteria 972
73 Ga0105239_10000174 3300010375 Bacteria 92922
74 Ga0105239_10013884 3300010375 Bacteria 8939
75 Ga0157314_1000257 3300012500 Bacteria 5729
76 Ga0157370_10005464 3300013104 Bacteria 14250
77 Ga0157372_10260254 3300013307 Bacteria 2015
78 Ga0157375_10358149 3300013308 Bacteria 1625
79 Ga0157375_10485472 3300013308 Bacteria 1400
80 Ga0157376_10012649 3300014969 Bacteria 6273
81 Ga0183369_1013 3300015685 Bacteria 222738
82 Ga0207427_100147 3300025231 Bacteria 80584
83 Ga0207427_100205 3300025231 Bacteria 53817
84 Ga0209437_100005 3300025233 Bacteria 1071596
85 Ga0209437_100349 3300025233 Bacteria 53817
86 Ga0209129_1000996 3300025258 Bacteria 16931
87 Ga0209129_1001724 3300025258 Bacteria 11788
88 Ga0209233_1000011 3300025261 Bacteria 1071611
89 Ga0209233_1000315 3300025261 Bacteria 53817
90 Ga0209758_1001324 3300025297 Bacteria 30059
91 Ga0209758_1016024 3300025297 Bacteria 3833
92 Ga0207656_10002809 3300025321 Bacteria 5922
93 Ga0207713_1001029 3300025735 Bacteria 24264
94 Ga0207647_10005121 3300025904 Bacteria 9651
95 Ga0207684_10070976 3300025910 Bacteria 2960
96 Ga0207707_10008725 3300025912 Bacteria 8796
97 Ga0207707_10413585 3300025912 Bacteria 1157
98 Ga0207695_10000683 3300025913 Bacteria 66533
99 Ga0207695_10001062 3300025913 Bacteria 48136
100 Ga0207695_10002565 3300025913 Bacteria 26704
101 Ga0207695_10006056 3300025913 Bacteria 15785
102 Ga0207671_10000011 3300025914 Bacteria 530349
103 Ga0207652_10448082 3300025921 Bacteria 1164
104 Ga0207681_10012490 3300025923 Bacteria 5241
105 Ga0207644_10000275 3300025931 Bacteria 34149
106 Ga0207690_10014955 3300025932 Bacteria 4699
107 Ga0207665_10179881 3300025939 Bacteria 1531
108 Ga0207711_10010901 3300025941 Bacteria 7555
109 Ga0207667_10004826 3300025949 Bacteria 16484
110 Ga0207668_10012499 3300025972 Bacteria 5198
111 Ga0207640_10009743 3300025981 Bacteria 5386
112 Ga0207658_10008695 3300025986 Bacteria 6898
113 Ga0207677_10410477 3300026023 Bacteria 1151
114 Ga0207703_10087453 3300026035 Bacteria 2613
115 Ga0207703_10794745 3300026035 Bacteria 903
116 Ga0207639_10060842 3300026041 Bacteria 2914
117 Ga0207678_10192478 3300026067 Bacteria 1743
118 Ga0207641_10001192 3300026088 Bacteria 26082
119 Ga0207641_10011000 3300026088 Bacteria 7421
120 Ga0207648_10319185 3300026089 Bacteria 1396
121 Ga0207674_10000217 3300026116 Bacteria 71594
122 Ga0207674_10026033 3300026116 Bacteria 6224
123 Ga0209588_1040982 3300027671 Bacteria 1495
124 Ga0268266_10000175 3300028379 Bacteria 115897
125 Ga0268266_10000337 3300028379 Bacteria 73510
126 Ga0268266_10005303 3300028379 Bacteria 12086
127 Ga0268266_10086454 3300028379 Bacteria 2742
128 Ga0268266_10459951 3300028379 Bacteria 1211
129 Ga0268265_10015775 3300028380 Bacteria 5177
130 Ga0268264_10002346 3300028381 Bacteria 16730
131 Ga0268264_10038088 3300028381 Bacteria 3967
132 Ga0265338_10000509 3300028800 Bacteria 68816
133 Ga0265332_10016430 3300031238 Bacteria 3266
134 Ga0307508_10077075 3300031616 Bacteria 2912
135 Ga0316575_10002110 3300031665 Bacteria 6649
136 Ga0307414_10358818 3300032004 Bacteria 1253
137 Ga0307414_10482280 3300032004 Bacteria 1094
138 Ga0316585_10017239 3300032137 Bacteria 2182
139 Ga0373958_0072027 3300034819 Bacteria 768
140 Ga0316574_0317106 3300035398 Bacteria 990
141 Ga0316582_0021038 3300036647 Bacteria 3846
142 Ga0316584_0011489 3300036712 Bacteria 6224
143 Ga0400484_33181 3300038725 Bacteria 2914
144 Ga0400491_20121 3300038727 Bacteria 1106
145 Ga0400485_03613 3300038735 Bacteria 6333
146 Ga0400488_24688 3300038741 Bacteria 2292
147 Ga0400486_01523 3300038742 Bacteria 1844
148 Ga0400486_26096 3300038742 Bacteria 60268
149 Ga0400483_051900 3300039062 Bacteria 2161
150 Ga0400483_269206 3300039062 Bacteria 85448
151 Ga0400487_54670 3300039110 Bacteria 23641
152 Ga0436365_1319295 3300039437 Bacteria 3519
153 Ga0436363_0090681 3300039450 Bacteria 3134
154 Ga0439436_0008891 3300041404 Bacteria 3083
155 Ga0439447_053680 3300041407 Bacteria 957
156 Ga0439449_0080946 3300042007 Bacteria 1198
157 Ga0466982_0000018 3300044672 Bacteria 113912
158 Ga0466965_0013389 3300044683 Bacteria 3871
159 Ga0466966_0004837 3300044684 Bacteria 8860
160 Ga0466963_0156582 3300044694 Bacteria 1584
161 Ga0466964_0003632 3300044706 Bacteria 5638
162 Ga0453684_0478903 3300044712 Bacteria 1381
163 Ga0466971_0033618 3300044719 Bacteria 2297
164 Ga0466970_0006230 3300044765 Bacteria 5950
165 Ga0466970_0015707 3300044765 Bacteria 3897
166 Ga0451576_0010585 3300045051 Bacteria 10562
167 Ga0495606_0005000 3300046507 Bacteria 12929
168 Ga0495632_0078341 3300046519 Bacteria 1579
169 Ga0495597_0108954 3300046542 Bacteria 1163
170 Ga0495668_0002434 3300046616 Bacteria 15331
171 Ga0495625_0058107 3300046660 Bacteria 2749
172 Ga0495670_0007931 3300046691 Bacteria 5218
173 Ga0495649_0046630 3300046694 Bacteria 2360
174 Ga0496103_0003567 3300048906 Bacteria 9505
175 Ga0496104_0009284 3300048907 Bacteria 8748
176 Ga0496105_0005501 3300048908 Bacteria 9614
177 Ga0496106_0095358 3300048909 Bacteria 2301
178 Ga0496107_0029553 3300048910 Bacteria 3900
179 Ga0496109_0637639 3300048912 Bacteria 1002
180 Ga0496110_0459941 3300048913 Bacteria 1160
181 Ga0496115_0059173 3300048918 Bacteria 3085
182 Ga0496116_0022059 3300048919 Bacteria 4787
183 Ga0496117_0004716 3300048920 Bacteria 14805
184 Ga0496117_0015128 3300048920 Bacteria 6603
185 Ga0496117_0284125 3300048920 Bacteria 884
186 Ga0496118_0019470 3300048921 Bacteria 6064
187 Ga0496118_0037281 3300048921 Bacteria 3915
188 Ga0496118_0071664 3300048921 Bacteria 2493
189 Ga0496119_0000306 3300048922 Bacteria 68399
190 Ga0496119_0007155 3300048922 Bacteria 10119
191 Ga0496120_0000154 3300048923 Bacteria 114615
192 Ga0496120_0006247 3300048923 Bacteria 9202
193 Ga0496121_0004598 3300048924 Bacteria 18381
194 Ga0496121_0005127 3300048924 Bacteria 17063
195 Ga0496121_0016631 3300048924 Bacteria 7579
196 Ga0496122_0091641 3300048925 Bacteria 2069
197 Ga0496123_0256167 3300048926 Bacteria 860
198 Ga0496124_0059957 3300048927 Bacteria 3194
199 Ga0496125_0000239 3300048928 Bacteria 112926
200 Ga0496125_0129433 3300048928 Bacteria 1780
201 Ga0496126_0000411 3300048929 Bacteria 86952
202 Ga0496126_0134263 3300048929 Bacteria 2136
203 Ga0496126_0364603 3300048929 Bacteria 1179
204 Ga0496126_0382188 3300048929 Bacteria 1146
205 Ga0501037_0442304 3300049573 Bacteria 888
206 Ga0501043_0506302 3300049579 Bacteria 901
207 Ga0501047_0039486 3300049581 Bacteria 4565
208 Ga0501048_0072989 3300049582 Bacteria 2422
209 Ga0501070_0041404 3300049586 Bacteria 3838
210 Ga0501070_0048103 3300049586 Bacteria 3543
211 Ga0501035_0341468 3300049822 Bacteria 1255
212 Ga0501044_0004109 3300049823 Bacteria 16324
213 Ga0501044_0103539 3300049823 Bacteria 2861
214 Ga0501044_0327702 3300049823 Bacteria 1455
215 Ga0501044_0354844 3300049823 Bacteria 1385
216 Ga0501044_0358517 3300049823 Bacteria 1376
217 nmdc:mga07m45_6259_c1 3300050496 Bacteria 6010
218 nmdc:mga06r32_185062_c1 3300050510 Bacteria 2069
219 nmdc:mga08x19_421_c1 3300050514 Bacteria 29460
220 Ga0500556_0010799 3300053104 Bacteria 2688
221 Ga0500604_0000035 3300053151 Bacteria 52540
222 Ga0466962_0003994 3300061719 Bacteria 7062

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300038741 Ga0400488_24688 Ga0400488_24688_1283_1861 187
2 3300039110 Ga0400487_54670 Ga0400487_54670_21601_22179 187
3 3300005548 Ga0070665_100000605 Ga0070665_10000060514 189
4 3300028379 Ga0268266_10000337 Ga0268266_1000033770 190
5 3300053151 Ga0500604_0000035 Ga0500604_0000035_23606_24313 198
6 3300005548 Ga0070665_100000195 Ga0070665_10000019575 200
7 3300028379 Ga0268266_10005303 Ga0268266_100053037 200
8 3300046519 Ga0495632_0078341 Ga0495632_0078341_23_631 200
9 3300028379 Ga0268266_10459951 Ga0268266_104599512 203
10 3300006847 Ga0075431_100311616 Ga0075431_1003116162 206
11 3300034819 Ga0373958_0072027 Ga0373958_0072027_62_700 206
12 3300050510 nmdc:mga06r32_185062_c1 nmdc:mga06r32_185062_c1_439_1143 206
13 3300026041 Ga0207639_10060842 Ga0207639_100608422 207
14 3300046694 Ga0495649_0046630 Ga0495649_0046630_601_1251 207
15 3300046691 Ga0495670_0007931 Ga0495670_0007931_4571_5203 208
16 3300009553 Ga0105249_10250789 Ga0105249_102507892 211
17 3300049586 Ga0501070_0048103 Ga0501070_0048103_2588_3241 212
18 3300032137 Ga0316585_10017239 Ga0316585_100172393 214
19 3300038735 Ga0400485_03613 Ga0400485_03613_3357_4073 214
20 3300038742 Ga0400486_26096 Ga0400486_26096_57858_58574 214
21 3300041407 Ga0439447_053680 Ga0439447_053680_145_810 215
22 3300046616 Ga0495668_0002434 Ga0495668_0002434_11768_12433 215
23 3300053104 Ga0500556_0010799 Ga0500556_0010799_780_1436 215
24 3300006353 Ga0075370_10006392 Ga0075370_100063926 216
25 3300005843 Ga0068860_100051035 Ga0068860_1000510355 218
26 3300028381 Ga0268264_10038088 Ga0268264_100380883 218
27 3300038725 Ga0400484_33181 Ga0400484_33181_1331_1999 219
28 3300039062 Ga0400483_051900 Ga0400483_051900_308_976 219
29 3300005343 Ga0070687_100188046 Ga0070687_1001880462 220
30 3300005440 Ga0070705_100169193 Ga0070705_1001691932 220
31 3300005445 Ga0070708_100005878 Ga0070708_1000058783 220
32 3300005445 Ga0070708_100027031 Ga0070708_1000270316 220
33 3300005445 Ga0070708_100339814 Ga0070708_1003398142 220
34 3300005459 Ga0068867_100602271 Ga0068867_1006022711 220
35 3300005518 Ga0070699_100057600 Ga0070699_1000576002 220
36 3300005518 Ga0070699_100476077 Ga0070699_1004760772 220
37 3300005536 Ga0070697_100010540 Ga0070697_1000105403 220
38 3300007265 Ga0099794_10022095 Ga0099794_100220953 220
39 3300007265 Ga0099794_10059863 Ga0099794_100598633 220
40 3300007265 Ga0099794_10067544 Ga0099794_100675442 220
41 3300010159 Ga0099796_10131151 Ga0099796_101311512 220
42 3300025910 Ga0207684_10070976 Ga0207684_100709762 220
43 3300025912 Ga0207707_10413585 Ga0207707_104135852 220
44 3300026023 Ga0207677_10410477 Ga0207677_104104772 220
45 3300026089 Ga0207648_10319185 Ga0207648_103191852 220
46 3300027671 Ga0209588_1040982 Ga0209588_10409822 220
47 3300009545 Ga0105237_10000084 Ga0105237_1000008459 221
48 3300010375 Ga0105239_10013884 Ga0105239_100138842 221
49 3300032004 Ga0307414_10358818 Ga0307414_103588182 221
50 3300048924 Ga0496121_0016631 Ga0496121_0016631_4233_4898 221
51 iso_pu_bacteria 2718218334 2721026023 221
52 3300005841 Ga0068863_100009521 Ga0068863_10000952110 222
53 3300013307 Ga0157372_10260254 Ga0157372_102602542 222
54 3300013308 Ga0157375_10485472 Ga0157375_104854722 222
55 3300026088 Ga0207641_10011000 Ga0207641_100110006 222
56 3300035398 Ga0316574_0317106 Ga0316574_0317106_276_959 222
57 3300044694 Ga0466963_0156582 Ga0466963_0156582_880_1563 222
58 3300048929 Ga0496126_0382188 Ga0496126_0382188_195_878 222
59 3300049579 Ga0501043_0506302 Ga0501043_0506302_110_784 222
60 3300049823 Ga0501044_0358517 Ga0501044_0358517_342_1016 222
61 3300003323 rootH1_10107532 rootH1_1010753217 223
62 3300009093 Ga0105240_11100753 Ga0105240_111007532 223
63 3300044712 Ga0453684_0478903 Ga0453684_0478903_478_1170 223
64 3300044765 Ga0466970_0015707 Ga0466970_0015707_128_805 223
65 3300045051 Ga0451576_0010585 Ga0451576_0010585_9143_9838 223
66 iso_pu_bacteria 2687453130 2687584322 223
67 iso_pu_bacteria 3006486233 3006488870 223
68 iso_pu_bacteria 8025478263 8025481732 223
69 3300005262 Ga0065165_1003511 Ga0065165_10035115 224
70 3300005548 Ga0070665_100439891 Ga0070665_1004398912 224
71 3300028379 Ga0268266_10086454 Ga0268266_100864544 224
72 3300032004 Ga0307414_10482280 Ga0307414_104822802 224
73 3300038727 Ga0400491_20121 Ga0400491_20121_311_1015 224
74 iso_pu_bacteria 2537561836 2538834258 224
75 iso_pu_bacteria 2643221562 2643831281 224
76 iso_pu_bacteria 8008485437 8008487468 224
77 iso_pu_bacteria 8025524527 8025527012 224
78 iso_pu_bacteria 8033684223 8033689933 224
79 iso_pu_bacteria 8047893842 8047896764 224
80 3300002075 JGI24738J21930_10004965 JGI24738J21930_100049653 225
81 3300002773 JGI25152J39213_1014457 JGI25152J39213_10144571 225
82 3300005344 Ga0070661_100061355 Ga0070661_1000613553 225
83 3300005344 Ga0070661_100132984 Ga0070661_1001329842 225
84 3300013308 Ga0157375_10358149 Ga0157375_103581493 225
85 3300025258 Ga0209129_1000996 Ga0209129_100099618 225
86 3300025297 Ga0209758_1016024 Ga0209758_10160242 225
87 3300046507 Ga0495606_0005000 Ga0495606_0005000_691_1374 225
88 3300048912 Ga0496109_0637639 Ga0496109_0637639_206_922 225
89 3300003187 JGI25151J46595_10000500 JGI25151J46595_1000050013 226
90 3300006237 Ga0097621_100226261 Ga0097621_1002262613 226
91 3300006358 Ga0068871_100084425 Ga0068871_1000844252 226
92 3300006914 Ga0075436_100000350 Ga0075436_10000035021 226
93 3300009101 Ga0105247_10061898 Ga0105247_100618983 226
94 3300014969 Ga0157376_10012649 Ga0157376_100126498 226
95 3300025939 Ga0207665_10179881 Ga0207665_101798812 226
96 3300031665 Ga0316575_10002110 Ga0316575_100021105 226
97 3300036647 Ga0316582_0021038 Ga0316582_0021038_1539_2249 226
98 3300036712 Ga0316584_0011489 Ga0316584_0011489_3093_3803 226
99 3300038742 Ga0400486_01523 Ga0400486_01523_118_834 226
100 3300039062 Ga0400483_269206 Ga0400483_269206_74413_75129 226
101 3300041404 Ga0439436_0008891 Ga0439436_0008891_966_1664 226
102 3300042007 Ga0439449_0080946 Ga0439449_0080946_267_950 226
103 3300048913 Ga0496110_0459941 Ga0496110_0459941_351_1043 226
104 3300048928 Ga0496125_0129433 Ga0496125_0129433_891_1583 226
105 3300049581 Ga0501047_0039486 Ga0501047_0039486_2930_3625 226
106 3300049823 Ga0501044_0004109 Ga0501044_0004109_14923_15618 226
107 3300050514 nmdc:mga08x19_421_c1 nmdc:mga08x19_421_c1_5261_5986 226
108 3300015685 Ga0183369_1013 Ga0183369_101368 227
109 3300049573 Ga0501037_0442304 Ga0501037_0442304_77_760 227
110 3300049582 Ga0501048_0072989 Ga0501048_0072989_136_819 227
111 3300049822 Ga0501035_0341468 Ga0501035_0341468_520_1203 227
112 3300049823 Ga0501044_0354844 Ga0501044_0354844_368_1051 227
113 3300002737 JGI25162J39368_1001103 JGI25162J39368_100110315 228
114 3300002772 JGI25164J39214_1000581 JGI25164J39214_100058115 228
115 3300003214 JGI25165J46597_1001569 JGI25165J46597_10015698 228
116 3300005335 Ga0070666_10117651 Ga0070666_101176513 228
117 3300005347 Ga0070668_100018275 Ga0070668_1000182755 228
118 3300005353 Ga0070669_100058637 Ga0070669_1000586372 228
119 3300005355 Ga0070671_100146898 Ga0070671_1001468983 228
120 3300005367 Ga0070667_100011289 Ga0070667_1000112896 228
121 3300005530 Ga0070679_100317643 Ga0070679_1003176432 228
122 3300005548 Ga0070665_100000079 Ga0070665_100000079118 228
123 3300005841 Ga0068863_100005849 Ga0068863_1000058496 228
124 3300005842 Ga0068858_100115377 Ga0068858_1001153772 228
125 3300005843 Ga0068860_100400730 Ga0068860_1004007301 228
126 3300009011 Ga0105251_10000534 Ga0105251_1000053425 228
127 3300009177 Ga0105248_10004923 Ga0105248_100049234 228
128 3300025231 Ga0207427_100147 Ga0207427_10014773 228
129 3300025233 Ga0209437_100005 Ga0209437_100005749 228
130 3300025261 Ga0209233_1000011 Ga0209233_1000011193 228
131 3300025735 Ga0207713_1001029 Ga0207713_100102920 228
132 3300025923 Ga0207681_10012490 Ga0207681_100124902 228
133 3300025931 Ga0207644_10000275 Ga0207644_1000027523 228
134 3300025941 Ga0207711_10010901 Ga0207711_100109017 228
135 3300025972 Ga0207668_10012499 Ga0207668_100124995 228
136 3300025986 Ga0207658_10008695 Ga0207658_100086957 228
137 3300026035 Ga0207703_10794745 Ga0207703_107947451 228
138 3300026088 Ga0207641_10001192 Ga0207641_1000119221 228
139 3300028379 Ga0268266_10000175 Ga0268266_1000017540 228
140 3300028380 Ga0268265_10015775 Ga0268265_100157754 228
141 3300028381 Ga0268264_10002346 Ga0268264_100023463 228
142 3300031616 Ga0307508_10077075 Ga0307508_100770752 228
143 3300039437 Ga0436365_1319295 Ga0436365_1319295_735_1439 228
144 3300039450 Ga0436363_0090681 Ga0436363_0090681_350_1054 228
145 3300046542 Ga0495597_0108954 Ga0495597_0108954_182_883 228
146 3300046660 Ga0495625_0058107 Ga0495625_0058107_223_924 228
147 3300048906 Ga0496103_0003567 Ga0496103_0003567_7347_8045 228
148 3300048919 Ga0496116_0022059 Ga0496116_0022059_2825_3523 228
149 3300048920 Ga0496117_0015128 Ga0496117_0015128_1343_2041 228
150 3300048921 Ga0496118_0019470 Ga0496118_0019470_2891_3589 228
151 3300048924 Ga0496121_0004598 Ga0496121_0004598_8621_9319 228
152 3300048925 Ga0496122_0091641 Ga0496122_0091641_803_1501 228
153 3300048926 Ga0496123_0256167 Ga0496123_0256167_101_799 228
154 3300048927 Ga0496124_0059957 Ga0496124_0059957_1410_2108 228
155 3300048929 Ga0496126_0134263 Ga0496126_0134263_1355_2053 228
156 3300049823 Ga0501044_0327702 Ga0501044_0327702_27_737 228
157 3300050496 nmdc:mga07m45_6259_c1 nmdc:mga07m45_6259_c1_1083_1784 228
158 3300028800 Ga0265338_10000509 Ga0265338_1000050961 229
159 3300005329 Ga0070683_100008068 Ga0070683_1000080687 230
160 3300009551 Ga0105238_10052568 Ga0105238_100525682 230
161 3300013104 Ga0157370_10005464 Ga0157370_100054645 230
162 3300049586 Ga0501070_0041404 Ga0501070_0041404_2812_3519 230
163 3300002737 JGI25162J39368_1001631 JGI25162J39368_10016313 231
164 3300002772 JGI25164J39214_1000806 JGI25164J39214_10008063 231
165 3300003214 JGI25165J46597_1001571 JGI25165J46597_100157111 231
166 3300003316 rootH1_10003123 rootH1_100031233 231
167 3300005337 Ga0070682_100004701 Ga0070682_1000047013 231
168 3300005366 Ga0070659_100001569 Ga0070659_10000156911 231
169 3300005458 Ga0070681_10007523 Ga0070681_100075235 231
170 3300005577 Ga0068857_100017581 Ga0068857_1000175814 231
171 3300009093 Ga0105240_10001824 Ga0105240_1000182425 231
172 3300009093 Ga0105240_10001947 Ga0105240_1000194724 231
173 3300009093 Ga0105240_10029791 Ga0105240_100297917 231
174 3300010375 Ga0105239_10000174 Ga0105239_1000017462 231
175 3300012500 Ga0157314_1000257 Ga0157314_10002577 231
176 3300025231 Ga0207427_100205 Ga0207427_10020546 231
177 3300025233 Ga0209437_100349 Ga0209437_10034946 231
178 3300025261 Ga0209233_1000315 Ga0209233_100031546 231
179 3300025912 Ga0207707_10008725 Ga0207707_1000872510 231
180 3300025913 Ga0207695_10006056 Ga0207695_100060567 231
181 3300025921 Ga0207652_10448082 Ga0207652_104480822 231
182 3300025932 Ga0207690_10014955 Ga0207690_100149551 231
183 3300026116 Ga0207674_10026033 Ga0207674_100260336 231
184 3300031238 Ga0265332_10016430 Ga0265332_100164303 231
185 3300048907 Ga0496104_0009284 Ga0496104_0009284_3058_3753 231
186 3300048908 Ga0496105_0005501 Ga0496105_0005501_2859_3554 231
187 3300048909 Ga0496106_0095358 Ga0496106_0095358_958_1653 231
188 3300048910 Ga0496107_0029553 Ga0496107_0029553_3162_3857 231
189 3300048918 Ga0496115_0059173 Ga0496115_0059173_1067_1762 231
190 3300048920 Ga0496117_0004716 Ga0496117_0004716_3873_4568 231
191 3300048920 Ga0496117_0284125 Ga0496117_0284125_76_771 231
192 3300048921 Ga0496118_0037281 Ga0496118_0037281_410_1105 231
193 3300048921 Ga0496118_0071664 Ga0496118_0071664_142_837 231
194 3300048922 Ga0496119_0000306 Ga0496119_0000306_6109_6804 231
195 3300048922 Ga0496119_0007155 Ga0496119_0007155_9202_9897 231
196 3300048923 Ga0496120_0000154 Ga0496120_0000154_111710_112405 231
197 3300048923 Ga0496120_0006247 Ga0496120_0006247_2380_3075 231
198 3300048924 Ga0496121_0005127 Ga0496121_0005127_14804_15499 231
199 3300048928 Ga0496125_0000239 Ga0496125_0000239_97679_98374 231
200 3300048929 Ga0496126_0000411 Ga0496126_0000411_84199_84894 231
201 3300048929 Ga0496126_0364603 Ga0496126_0364603_382_1077 231
202 3300049823 Ga0501044_0103539 Ga0501044_0103539_14_820 231
203 3300003320 rootH2_10033365 rootH2_1003336510 232
204 3300009545 Ga0105237_10048435 Ga0105237_100484356 233
205 3300044672 Ga0466982_0000018 Ga0466982_0000018_32723_33430 233
206 3300044683 Ga0466965_0013389 Ga0466965_0013389_2860_3567 233
207 3300044684 Ga0466966_0004837 Ga0466966_0004837_7005_7712 233
208 3300044706 Ga0466964_0003632 Ga0466964_0003632_179_886 233
209 3300044719 Ga0466971_0033618 Ga0466971_0033618_260_967 233
210 3300044765 Ga0466970_0006230 Ga0466970_0006230_3362_4069 233
211 3300061719 Ga0466962_0003994 Ga0466962_0003994_2104_2811 233
212 3300001989 JGI24739J22299_10000146 JGI24739J22299_1000014619 234
213 3300001990 JGI24737J22298_10003278 JGI24737J22298_100032783 234
214 3300003215 JGI25153J46596_10021116 JGI25153J46596_100211163 234
215 3300003578 Ga0006562J51391_1010347 Ga0006562J51391_10103477 234
216 3300003578 Ga0006562J51391_1010349 Ga0006562J51391_10103496 234
217 3300005577 Ga0068857_100000296 Ga0068857_10000029616 234
218 3300005616 Ga0068852_100009599 Ga0068852_1000095997 234
219 3300005842 Ga0068858_100125049 Ga0068858_1001250495 234
220 3300025258 Ga0209129_1001724 Ga0209129_10017244 234
221 3300025297 Ga0209758_1001324 Ga0209758_100132411 234
222 3300025321 Ga0207656_10002809 Ga0207656_100028095 234
223 3300025904 Ga0207647_10005121 Ga0207647_100051212 234
224 3300025913 Ga0207695_10000683 Ga0207695_1000068312 234
225 3300025913 Ga0207695_10001062 Ga0207695_1000106238 234
226 3300025913 Ga0207695_10002565 Ga0207695_1000256512 234
227 3300025914 Ga0207671_10000011 Ga0207671_10000011354 234
228 3300025949 Ga0207667_10004826 Ga0207667_100048265 234
229 3300025981 Ga0207640_10009743 Ga0207640_100097437 234
230 3300026035 Ga0207703_10087453 Ga0207703_100874532 234
231 3300026067 Ga0207678_10192478 Ga0207678_101924782 234
232 3300026116 Ga0207674_10000217 Ga0207674_1000021719 234

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06508

QueC

Queuosine biosynthesis protein QueC

43

258

0.96

PF00733

Asn_synthase

Asparagine synthase

31

135

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8317 10 226
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8204 10 226
2pg3-assembly1.cif.gz_A-2 crystal structure of a queuosine biosynthesis protein quec (eca1155) from erwinia carotovora subsp. atroseptica scri1043 at 2.40 a resolution 0.8142 9 226
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8121 10 226
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8008 10 226
ID Description Score Start End Superfamily
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8975 11 233 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8781 11 225 3.40.50.620
af_Q8IJK4_450_726_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8659 13 70 3.40.50.620
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8637 11 233 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8431 11 225 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A3D0K9J3-F1-model_v4 deleted 0.9834 141 233
AF-A0A6L8GDJ8-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9787 9 196
AF-K1ZZZ0-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9776 27 233
AF-A0A7W1U496-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9764 9 232 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A1Q6VHJ3-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9762 9 181

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pLDDT pTM Quality
88.2 0.88 High
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Predicted Structure (AlphaFold2)

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