F345174
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 232 | 165 | 464 | 314 |
Family's Representative Sequence
| Representative Sequence | 3300028556|Ga0265337_1003822|Ga0265337_10038224 |
| Length | 344 |
| Sequence | MSLPTPCASVIDADDPYAVHSIIDSPRASPVKGAVRWEPVHSLWNGSMMLATLIAGPMFFTWRAFAVFLGLTAALLLLGHSVGFHRRLIHGSFKCPKALEYFLVWCGTAVGMSGPFWMIRAHDLRDWAQRQPHCHPYLRHGRPMLIDAMWQLHGRLDLVNPPRFDLGETGRDRFYRFLEATWMLQQVPIAAILYLFGGWPFVVWGICARVFVSVAGHWFVGHLAHNRGPQTWLVDGAGVQAFDVPWAAIPTMGEAWHNNHHAYPGSARIGLYPGQADWGFRLIQLFELLGLAWDVRTPQNLPVRSQLKPAQGKPALTLLADAARSTATNRQTAWRARRRRPIGI |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 4 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 5 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 6 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 7 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 8 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 10 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 14 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 21 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 24 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 25 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 26 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 27 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 28 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 29 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 30 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 31 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 32 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300015684 | Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 | Metagenome | Unclassified |
| 47 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 48 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 50 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 86 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 87 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 88 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 89 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 90 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 91 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 92 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 93 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 94 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 95 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 96 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 97 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 98 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 121 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 122 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 123 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 124 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 125 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 126 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 127 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 128 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 129 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 130 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 131 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 132 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 133 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 134 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 135 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 140 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 143 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 144 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 145 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 146 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 147 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
| 148 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 149 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 150 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 151 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 152 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 153 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 154 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 155 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 156 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 157 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 158 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 159 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 160 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 161 | 2643221560 | Sphingopyxis sp. Root1497 | Isolate | Unclassified |
| 162 | 2808606401 | Sphingobium sp. AEW010 | Isolate | Rhizosphere |
| 163 | 2808606404 | Sphingobium sp. AEW013 | Isolate | Rhizosphere |
| 164 | 2808606405 | Sphingobium sp. AEW001 | Isolate | Rhizosphere |
| 165 | 2880518877 | Sphingobium sp. JAI105 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.84 |
| Metatranscriptomes | 0 |
| Isolates | 2.16 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 22.41 |
| Nodule | 0 |
| Rhizoplane | 3.88 |
| Rhizosphere | 64.66 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.59 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0265337_1003822 | 3300028556 | Bacteria | 6400 |
| 2 | JGI24740J21852_10003383 | 3300001979 | Bacteria | 7025 |
| 3 | JGI24737J22298_10001410 | 3300001990 | Bacteria | 8531 |
| 4 | rootL2_10136508 | 3300003322 | Bacteria | 1329 |
| 5 | rootH1_10103623 | 3300003323 | Bacteria | 3977 |
| 6 | rootH1_10168608 | 3300003323 | Bacteria | 4873 |
| 7 | rootH1_10200684 | 3300003323 | Bacteria | 4487 |
| 8 | Ga0055537_1008117 | 3300003773 | Bacteria | 2454 |
| 9 | Ga0055530_10010126 | 3300003791 | Bacteria | 3529 |
| 10 | Ga0055531_10005915 | 3300003794 | Bacteria | 7041 |
| 11 | Ga0055531_10014486 | 3300003794 | Bacteria | 3545 |
| 12 | Ga0065165_1010650 | 3300005262 | Bacteria | 3941 |
| 13 | Ga0070658_10005860 | 3300005327 | Bacteria | 9964 |
| 14 | Ga0070658_10165249 | 3300005327 | Bacteria | 1858 |
| 15 | Ga0070683_100082476 | 3300005329 | Bacteria | 3011 |
| 16 | Ga0070670_100025470 | 3300005331 | Bacteria | 5090 |
| 17 | Ga0068869_100502631 | 3300005334 | Bacteria | 1012 |
| 18 | Ga0070660_100025501 | 3300005339 | Bacteria | 4394 |
| 19 | Ga0070674_100008442 | 3300005356 | Bacteria | 6134 |
| 20 | Ga0070667_100222526 | 3300005367 | Bacteria | 1680 |
| 21 | Ga0070684_100056460 | 3300005535 | Bacteria | 3427 |
| 22 | Ga0068853_100161833 | 3300005539 | Bacteria | 2020 |
| 23 | Ga0070665_100002247 | 3300005548 | Bacteria | 21484 |
| 24 | Ga0070665_100317644 | 3300005548 | Bacteria | 1562 |
| 25 | Ga0068857_100074081 | 3300005577 | Bacteria | 3034 |
| 26 | Ga0068854_100054493 | 3300005578 | Unclassified | 2876 |
| 27 | Ga0068854_100191837 | 3300005578 | Bacteria | 1601 |
| 28 | Ga0068856_100002773 | 3300005614 | Bacteria | 17933 |
| 29 | Ga0068856_100342940 | 3300005614 | Bacteria | 1512 |
| 30 | Ga0068851_10081930 | 3300005834 | Bacteria | 1686 |
| 31 | Ga0068870_10064388 | 3300005840 | Bacteria | 1980 |
| 32 | Ga0068863_100004442 | 3300005841 | Bacteria | 13830 |
| 33 | Ga0068860_100002509 | 3300005843 | Bacteria | 19266 |
| 34 | Ga0068862_100205235 | 3300005844 | Bacteria | 1778 |
| 35 | Ga0075362_10008641 | 3300006177 | Bacteria | 3908 |
| 36 | Ga0075362_10046518 | 3300006177 | Bacteria | 1930 |
| 37 | Ga0075367_10081997 | 3300006178 | Bacteria | 1952 |
| 38 | Ga0075366_10037484 | 3300006195 | Bacteria | 2863 |
| 39 | Ga0075370_10026215 | 3300006353 | Bacteria | 3228 |
| 40 | Ga0075370_10060010 | 3300006353 | Bacteria | 2166 |
| 41 | Ga0105251_10015959 | 3300009011 | Unclassified | 4082 |
| 42 | Ga0105245_10017892 | 3300009098 | Bacteria | 6188 |
| 43 | Ga0105243_10330203 | 3300009148 | Bacteria | 1393 |
| 44 | Ga0105241_10003873 | 3300009174 | Bacteria | 11093 |
| 45 | Ga0105237_10038255 | 3300009545 | Bacteria | 4845 |
| 46 | Ga0105238_10015877 | 3300009551 | Bacteria | 7619 |
| 47 | Ga0105238_10051696 | 3300009551 | Bacteria | 4133 |
| 48 | Ga0105249_10000072 | 3300009553 | Bacteria | 146435 |
| 49 | Ga0105239_10007253 | 3300010375 | Bacteria | 12734 |
| 50 | Ga0105239_10655928 | 3300010375 | Bacteria | 1199 |
| 51 | Ga0157373_10020059 | 3300013100 | Bacteria | 4863 |
| 52 | Ga0157371_10000197 | 3300013102 | Bacteria | 88423 |
| 53 | Ga0157371_10051853 | 3300013102 | Unclassified | 2915 |
| 54 | Ga0157370_10000116 | 3300013104 | Bacteria | 92448 |
| 55 | Ga0157370_10089790 | 3300013104 | Unclassified | 2886 |
| 56 | Ga0157370_10433740 | 3300013104 | Bacteria | 1208 |
| 57 | Ga0157369_10035288 | 3300013105 | Bacteria | 5484 |
| 58 | Ga0157369_10088256 | 3300013105 | Bacteria | 3310 |
| 59 | Ga0157378_10103752 | 3300013297 | Bacteria | 2598 |
| 60 | Ga0157372_10678289 | 3300013307 | Bacteria | 1199 |
| 61 | Ga0183365_10005 | 3300015684 | Bacteria | 249619 |
| 62 | Ga0209565_1000299 | 3300025263 | Bacteria | 47081 |
| 63 | Ga0209676_1000065 | 3300025292 | Bacteria | 318605 |
| 64 | Ga0209676_1000281 | 3300025292 | Bacteria | 105894 |
| 65 | Ga0209676_1011417 | 3300025292 | Bacteria | 3584 |
| 66 | Ga0209564_1032972 | 3300025295 | Bacteria | 1548 |
| 67 | Ga0209758_1000007 | 3300025297 | Bacteria | 1270410 |
| 68 | Ga0209758_1035120 | 3300025297 | Bacteria | 1981 |
| 69 | Ga0209050_1004425 | 3300025298 | Bacteria | 9502 |
| 70 | Ga0209050_1006324 | 3300025298 | Bacteria | 7052 |
| 71 | Ga0209050_1016070 | 3300025298 | Bacteria | 3090 |
| 72 | Ga0209050_1038322 | 3300025298 | Bacteria | 1368 |
| 73 | Ga0207426_1020043 | 3300025302 | Bacteria | 2330 |
| 74 | Ga0209257_1000113 | 3300025304 | Bacteria | 233523 |
| 75 | Ga0209257_1001642 | 3300025304 | Bacteria | 25550 |
| 76 | Ga0209257_1006358 | 3300025304 | Bacteria | 7665 |
| 77 | Ga0207656_10022681 | 3300025321 | Bacteria | 2521 |
| 78 | Ga0207688_10054299 | 3300025901 | Bacteria | 2247 |
| 79 | Ga0207647_10038345 | 3300025904 | Bacteria | 3030 |
| 80 | Ga0207643_10131876 | 3300025908 | Bacteria | 1487 |
| 81 | Ga0207705_10000489 | 3300025909 | Bacteria | 33785 |
| 82 | Ga0207705_10116295 | 3300025909 | Bacteria | 1980 |
| 83 | Ga0207654_10004237 | 3300025911 | Bacteria | 7236 |
| 84 | Ga0207695_10000288 | 3300025913 | Bacteria | 125085 |
| 85 | Ga0207695_10015826 | 3300025913 | Bacteria | 8860 |
| 86 | Ga0207695_10059668 | 3300025913 | Bacteria | 3954 |
| 87 | Ga0207671_10004548 | 3300025914 | Bacteria | 13182 |
| 88 | Ga0207657_10016893 | 3300025919 | Bacteria | 7022 |
| 89 | Ga0207649_10000443 | 3300025920 | Bacteria | 29944 |
| 90 | Ga0207694_10005409 | 3300025924 | Bacteria | 9831 |
| 91 | Ga0207694_10099193 | 3300025924 | Unclassified | 2307 |
| 92 | Ga0207650_10076636 | 3300025925 | Bacteria | 2526 |
| 93 | Ga0207687_10000564 | 3300025927 | Bacteria | 25021 |
| 94 | Ga0207690_10002282 | 3300025932 | Bacteria | 11694 |
| 95 | Ga0207706_10155881 | 3300025933 | Bacteria | 2008 |
| 96 | Ga0207709_10272121 | 3300025935 | Bacteria | 1247 |
| 97 | Ga0207669_10000150 | 3300025937 | Bacteria | 33077 |
| 98 | Ga0207691_10377257 | 3300025940 | Bacteria | 1211 |
| 99 | Ga0207667_10000001 | 3300025949 | Bacteria | 1178522 |
| 100 | Ga0207667_10077829 | 3300025949 | Bacteria | 3438 |
| 101 | Ga0207667_10465525 | 3300025949 | Bacteria | 1284 |
| 102 | Ga0207712_10000055 | 3300025961 | Bacteria | 146438 |
| 103 | Ga0207640_10010426 | 3300025981 | Bacteria | 5236 |
| 104 | Ga0207640_10039112 | 3300025981 | Unclassified | 2999 |
| 105 | Ga0207658_10009967 | 3300025986 | Bacteria | 6457 |
| 106 | Ga0207639_10004474 | 3300026041 | Bacteria | 9434 |
| 107 | Ga0207639_10096944 | 3300026041 | Bacteria | 2374 |
| 108 | Ga0207678_10003760 | 3300026067 | Bacteria | 13649 |
| 109 | Ga0207702_10002646 | 3300026078 | Bacteria | 16813 |
| 110 | Ga0207702_10019833 | 3300026078 | Bacteria | 5568 |
| 111 | Ga0207702_10285425 | 3300026078 | Bacteria | 1562 |
| 112 | Ga0207648_10481883 | 3300026089 | Bacteria | 1133 |
| 113 | Ga0207674_10004143 | 3300026116 | Bacteria | 17543 |
| 114 | Ga0207698_10039039 | 3300026142 | Bacteria | 3514 |
| 115 | Ga0268266_10000002 | 3300028379 | Bacteria | 3059047 |
| 116 | Ga0268265_10183388 | 3300028380 | Bacteria | 1800 |
| 117 | Ga0268264_10000555 | 3300028381 | Bacteria | 46158 |
| 118 | Ga0307513_10013785 | 3300031456 | Bacteria | 9912 |
| 119 | Ga0307513_10120922 | 3300031456 | Bacteria | 2586 |
| 120 | Ga0307406_10074296 | 3300031901 | Bacteria | 2238 |
| 121 | Ga0307412_10001382 | 3300031911 | Bacteria | 13475 |
| 122 | Ga0307412_10003787 | 3300031911 | Bacteria | 8406 |
| 123 | Ga0307412_10037909 | 3300031911 | Bacteria | 3100 |
| 124 | Ga0307412_10048228 | 3300031911 | Bacteria | 2800 |
| 125 | Ga0307414_10000091 | 3300032004 | Bacteria | 72871 |
| 126 | Ga0307414_10332664 | 3300032004 | Bacteria | 1297 |
| 127 | Ga0395898_0118632 | 3300037466 | Bacteria | 2535 |
| 128 | Ga0395905_0000292 | 3300037471 | Bacteria | 73325 |
| 129 | Ga0395905_0026188 | 3300037471 | Bacteria | 5500 |
| 130 | Ga0439431_0048366 | 3300041997 | Bacteria | 1098 |
| 131 | Ga0439445_0008010 | 3300042004 | Bacteria | 2464 |
| 132 | Ga0466972_0012460 | 3300044658 | Bacteria | 4274 |
| 133 | Ga0466961_0101739 | 3300044693 | Bacteria | 1810 |
| 134 | Ga0466960_0030553 | 3300044901 | Bacteria | 2480 |
| 135 | Ga0466959_0057034 | 3300045049 | Bacteria | 2849 |
| 136 | Ga0466959_0058744 | 3300045049 | Bacteria | 2801 |
| 137 | Ga0466958_0068520 | 3300045836 | Bacteria | 2169 |
| 138 | Ga0495627_010144 | 3300046453 | Bacteria | 3438 |
| 139 | Ga0495585_0003750 | 3300046492 | Bacteria | 10142 |
| 140 | Ga0495596_0013054 | 3300046500 | Bacteria | 3538 |
| 141 | Ga0495607_0021105 | 3300046501 | Bacteria | 4101 |
| 142 | Ga0495583_0000055 | 3300046506 | Bacteria | 201245 |
| 143 | Ga0495583_0000639 | 3300046506 | Bacteria | 46331 |
| 144 | Ga0495616_0000153 | 3300046513 | Bacteria | 60398 |
| 145 | Ga0495631_0108369 | 3300046518 | Bacteria | 1194 |
| 146 | Ga0495637_0012950 | 3300046520 | Bacteria | 3975 |
| 147 | Ga0495643_0009084 | 3300046522 | Bacteria | 6228 |
| 148 | Ga0495648_0000123 | 3300046524 | Bacteria | 92159 |
| 149 | Ga0495663_0000408 | 3300046525 | Bacteria | 15693 |
| 150 | Ga0495633_0001117 | 3300046558 | Bacteria | 21563 |
| 151 | Ga0495668_0000004 | 3300046616 | Bacteria | 574236 |
| 152 | Ga0495668_0027168 | 3300046616 | Bacteria | 3243 |
| 153 | Ga0495668_0052790 | 3300046616 | Bacteria | 2249 |
| 154 | Ga0495668_0070376 | 3300046616 | Bacteria | 1923 |
| 155 | Ga0495611_0006235 | 3300046648 | Bacteria | 5090 |
| 156 | Ga0495625_0000769 | 3300046660 | Bacteria | 44640 |
| 157 | Ga0495625_0001233 | 3300046660 | Bacteria | 32326 |
| 158 | Ga0495625_0020297 | 3300046660 | Bacteria | 5132 |
| 159 | Ga0495671_0000248 | 3300046692 | Bacteria | 46331 |
| 160 | Ga0495649_0051701 | 3300046694 | Bacteria | 2228 |
| 161 | Ga0495683_0000751 | 3300047323 | Bacteria | 23402 |
| 162 | Ga0495687_000181 | 3300047443 | Bacteria | 91455 |
| 163 | Ga0495687_000286 | 3300047443 | Bacteria | 66428 |
| 164 | Ga0495677_0000613 | 3300047445 | Bacteria | 14560 |
| 165 | Ga0495677_0011332 | 3300047445 | Bacteria | 3263 |
| 166 | Ga0495677_0062967 | 3300047445 | Bacteria | 1377 |
| 167 | Ga0495673_0000438 | 3300047469 | Bacteria | 46331 |
| 168 | Ga0495681_0009667 | 3300047470 | Bacteria | 5915 |
| 169 | Ga0495681_0024674 | 3300047470 | Bacteria | 3159 |
| 170 | Ga0496102_0001778 | 3300048905 | Bacteria | 18709 |
| 171 | Ga0496103_0000784 | 3300048906 | Bacteria | 23390 |
| 172 | Ga0496104_0004119 | 3300048907 | Bacteria | 12625 |
| 173 | Ga0496109_0088439 | 3300048912 | Bacteria | 2863 |
| 174 | Ga0496111_0010542 | 3300048914 | Bacteria | 6208 |
| 175 | Ga0496114_0004207 | 3300048917 | Bacteria | 11153 |
| 176 | Ga0496114_0495258 | 3300048917 | Bacteria | 1081 |
| 177 | Ga0496115_0000783 | 3300048918 | Bacteria | 23323 |
| 178 | Ga0496115_0055227 | 3300048918 | Bacteria | 3190 |
| 179 | Ga0496116_0011220 | 3300048919 | Bacteria | 7440 |
| 180 | Ga0496117_0003485 | 3300048920 | Bacteria | 18247 |
| 181 | Ga0496117_0137096 | 3300048920 | Bacteria | 1472 |
| 182 | Ga0496118_0000154 | 3300048921 | Bacteria | 122224 |
| 183 | Ga0496119_0011995 | 3300048922 | Bacteria | 7095 |
| 184 | Ga0496121_0000226 | 3300048924 | Bacteria | 121831 |
| 185 | Ga0496121_0000489 | 3300048924 | Bacteria | 76115 |
| 186 | Ga0496121_0004555 | 3300048924 | Bacteria | 18527 |
| 187 | Ga0496124_0000232 | 3300048927 | Bacteria | 108986 |
| 188 | Ga0496125_0003831 | 3300048928 | Bacteria | 17853 |
| 189 | Ga0496125_0067566 | 3300048928 | Bacteria | 2816 |
| 190 | Ga0496126_0000501 | 3300048929 | Bacteria | 76957 |
| 191 | Ga0496126_0006415 | 3300048929 | Bacteria | 13115 |
| 192 | Ga0495682_0043381 | 3300049460 | Bacteria | 1647 |
| 193 | Ga0501033_0044077 | 3300049570 | Bacteria | 3321 |
| 194 | Ga0501034_0063312 | 3300049571 | Bacteria | 3712 |
| 195 | Ga0501043_0142121 | 3300049579 | Bacteria | 1879 |
| 196 | Ga0501241_002884 | 3300049758 | Bacteria | 3296 |
| 197 | Ga0501241_008097 | 3300049758 | Bacteria | 1924 |
| 198 | Ga0501035_0008004 | 3300049822 | Bacteria | 9850 |
| 199 | Ga0501035_0428637 | 3300049822 | Bacteria | 1097 |
| 200 | Ga0501044_0239772 | 3300049823 | Bacteria | 1757 |
| 201 | Ga0501044_0355011 | 3300049823 | Bacteria | 1385 |
| 202 | nmdc:mga03683_39923_c1 | 3300050489 | Bacteria | 1923 |
| 203 | nmdc:mga03683_6914_c1 | 3300050489 | Bacteria | 3910 |
| 204 | nmdc:mga00v17_131015_c1 | 3300050491 | Bacteria | 1602 |
| 205 | nmdc:mga00v17_797_c1 | 3300050491 | Bacteria | 17184 |
| 206 | nmdc:mga0k408_12410_c1 | 3300050493 | Bacteria | 4657 |
| 207 | nmdc:mga06z11_221_c1 | 3300050494 | Bacteria | 22754 |
| 208 | nmdc:mga07m45_105_c1 | 3300050496 | Bacteria | 33210 |
| 209 | Ga0500610_0000579 | 3300053079 | Bacteria | 11261 |
| 210 | Ga0500635_0000236 | 3300053080 | Bacteria | 24446 |
| 211 | Ga0500643_003186 | 3300053087 | Bacteria | 8018 |
| 212 | Ga0500643_007128 | 3300053087 | Bacteria | 4571 |
| 213 | Ga0500643_030154 | 3300053087 | Bacteria | 1663 |
| 214 | Ga0500583_0008408 | 3300053092 | Bacteria | 3702 |
| 215 | Ga0500651_0007376 | 3300053093 | Bacteria | 6423 |
| 216 | Ga0500555_002125 | 3300053103 | Bacteria | 5797 |
| 217 | Ga0500562_004095 | 3300053108 | Bacteria | 3674 |
| 218 | Ga0500595_001907 | 3300053119 | Bacteria | 10749 |
| 219 | Ga0500608_000109 | 3300053122 | Bacteria | 33750 |
| 220 | Ga0500642_0000007 | 3300053130 | Bacteria | 294238 |
| 221 | Ga0500573_0000021 | 3300053140 | Bacteria | 159093 |
| 222 | Ga0500573_0110056 | 3300053140 | Bacteria | 1542 |
| 223 | Ga0500616_0007393 | 3300053153 | Bacteria | 6992 |
| 224 | Ga0500622_0001669 | 3300053156 | Bacteria | 17343 |
| 225 | Ga0500622_0004785 | 3300053156 | Bacteria | 8324 |
| 226 | Ga0500645_000083 | 3300053730 | Bacteria | 76285 |
| 227 | Ga0500645_001618 | 3300053730 | Bacteria | 11142 |
| 228 | 2643819508 | 2643221560 | Bacteria | 4801179 |
| 229 | 2809066061 | 2808606401 | Bacteria | 4586670 |
| 230 | 2809082082 | 2808606404 | Bacteria | 4652788 |
| 231 | 2809086450 | 2808606405 | Bacteria | 4586632 |
| 232 | 2880520943 | 2880518877 | Bacteria | 5012590 |
| 233 | Ga0265337_1003822 | |||
| 234 | JGI24740J21852_10003383 | |||
| 235 | JGI24737J22298_10001410 | |||
| 236 | rootL2_10136508 | |||
| 237 | rootH1_10103623 | |||
| 238 | rootH1_10168608 | |||
| 239 | rootH1_10200684 | |||
| 240 | Ga0055537_1008117 | |||
| 241 | Ga0055530_10010126 | |||
| 242 | Ga0055531_10005915 | |||
| 243 | Ga0055531_10014486 | |||
| 244 | Ga0065165_1010650 | |||
| 245 | Ga0070658_10005860 | |||
| 246 | Ga0070658_10165249 | |||
| 247 | Ga0070683_100082476 | |||
| 248 | Ga0070670_100025470 | |||
| 249 | Ga0068869_100502631 | |||
| 250 | Ga0070660_100025501 | |||
| 251 | Ga0070674_100008442 | |||
| 252 | Ga0070667_100222526 | |||
| 253 | Ga0070684_100056460 | |||
| 254 | Ga0068853_100161833 | |||
| 255 | Ga0070665_100002247 | |||
| 256 | Ga0070665_100317644 | |||
| 257 | Ga0068857_100074081 | |||
| 258 | Ga0068854_100054493 | |||
| 259 | Ga0068854_100191837 | |||
| 260 | Ga0068856_100002773 | |||
| 261 | Ga0068856_100342940 | |||
| 262 | Ga0068851_10081930 | |||
| 263 | Ga0068870_10064388 | |||
| 264 | Ga0068863_100004442 | |||
| 265 | Ga0068860_100002509 | |||
| 266 | Ga0068862_100205235 | |||
| 267 | Ga0075362_10008641 | |||
| 268 | Ga0075362_10046518 | |||
| 269 | Ga0075367_10081997 | |||
| 270 | Ga0075366_10037484 | |||
| 271 | Ga0075370_10026215 | |||
| 272 | Ga0075370_10060010 | |||
| 273 | Ga0105251_10015959 | |||
| 274 | Ga0105245_10017892 | |||
| 275 | Ga0105243_10330203 | |||
| 276 | Ga0105241_10003873 | |||
| 277 | Ga0105237_10038255 | |||
| 278 | Ga0105238_10015877 | |||
| 279 | Ga0105238_10051696 | |||
| 280 | Ga0105249_10000072 | |||
| 281 | Ga0105239_10007253 | |||
| 282 | Ga0105239_10655928 | |||
| 283 | Ga0157373_10020059 | |||
| 284 | Ga0157371_10000197 | |||
| 285 | Ga0157371_10051853 | |||
| 286 | Ga0157370_10000116 | |||
| 287 | Ga0157370_10089790 | |||
| 288 | Ga0157370_10433740 | |||
| 289 | Ga0157369_10035288 | |||
| 290 | Ga0157369_10088256 | |||
| 291 | Ga0157378_10103752 | |||
| 292 | Ga0157372_10678289 | |||
| 293 | Ga0183365_10005 | |||
| 294 | Ga0209565_1000299 | |||
| 295 | Ga0209676_1000065 | |||
| 296 | Ga0209676_1000281 | |||
| 297 | Ga0209676_1011417 | |||
| 298 | Ga0209564_1032972 | |||
| 299 | Ga0209758_1000007 | |||
| 300 | Ga0209758_1035120 | |||
| 301 | Ga0209050_1004425 | |||
| 302 | Ga0209050_1006324 | |||
| 303 | Ga0209050_1016070 | |||
| 304 | Ga0209050_1038322 | |||
| 305 | Ga0207426_1020043 | |||
| 306 | Ga0209257_1000113 | |||
| 307 | Ga0209257_1001642 | |||
| 308 | Ga0209257_1006358 | |||
| 309 | Ga0207656_10022681 | |||
| 310 | Ga0207688_10054299 | |||
| 311 | Ga0207647_10038345 | |||
| 312 | Ga0207643_10131876 | |||
| 313 | Ga0207705_10000489 | |||
| 314 | Ga0207705_10116295 | |||
| 315 | Ga0207654_10004237 | |||
| 316 | Ga0207695_10000288 | |||
| 317 | Ga0207695_10015826 | |||
| 318 | Ga0207695_10059668 | |||
| 319 | Ga0207671_10004548 | |||
| 320 | Ga0207657_10016893 | |||
| 321 | Ga0207649_10000443 | |||
| 322 | Ga0207694_10005409 | |||
| 323 | Ga0207694_10099193 | |||
| 324 | Ga0207650_10076636 | |||
| 325 | Ga0207687_10000564 | |||
| 326 | Ga0207690_10002282 | |||
| 327 | Ga0207706_10155881 | |||
| 328 | Ga0207709_10272121 | |||
| 329 | Ga0207669_10000150 | |||
| 330 | Ga0207691_10377257 | |||
| 331 | Ga0207667_10000001 | |||
| 332 | Ga0207667_10077829 | |||
| 333 | Ga0207667_10465525 | |||
| 334 | Ga0207712_10000055 | |||
| 335 | Ga0207640_10010426 | |||
| 336 | Ga0207640_10039112 | |||
| 337 | Ga0207658_10009967 | |||
| 338 | Ga0207639_10004474 | |||
| 339 | Ga0207639_10096944 | |||
| 340 | Ga0207678_10003760 | |||
| 341 | Ga0207702_10002646 | |||
| 342 | Ga0207702_10019833 | |||
| 343 | Ga0207702_10285425 | |||
| 344 | Ga0207648_10481883 | |||
| 345 | Ga0207674_10004143 | |||
| 346 | Ga0207698_10039039 | |||
| 347 | Ga0268266_10000002 | |||
| 348 | Ga0268265_10183388 | |||
| 349 | Ga0268264_10000555 | |||
| 350 | Ga0307513_10013785 | |||
| 351 | Ga0307513_10120922 | |||
| 352 | Ga0307406_10074296 | |||
| 353 | Ga0307412_10001382 | |||
| 354 | Ga0307412_10003787 | |||
| 355 | Ga0307412_10037909 | |||
| 356 | Ga0307412_10048228 | |||
| 357 | Ga0307414_10000091 | |||
| 358 | Ga0307414_10332664 | |||
| 359 | Ga0395898_0118632 | |||
| 360 | Ga0395905_0000292 | |||
| 361 | Ga0395905_0026188 | |||
| 362 | Ga0439431_0048366 | |||
| 363 | Ga0439445_0008010 | |||
| 364 | Ga0466972_0012460 | |||
| 365 | Ga0466961_0101739 | |||
| 366 | Ga0466960_0030553 | |||
| 367 | Ga0466959_0057034 | |||
| 368 | Ga0466959_0058744 | |||
| 369 | Ga0466958_0068520 | |||
| 370 | Ga0495627_010144 | |||
| 371 | Ga0495585_0003750 | |||
| 372 | Ga0495596_0013054 | |||
| 373 | Ga0495607_0021105 | |||
| 374 | Ga0495583_0000055 | |||
| 375 | Ga0495583_0000639 | |||
| 376 | Ga0495616_0000153 | |||
| 377 | Ga0495631_0108369 | |||
| 378 | Ga0495637_0012950 | |||
| 379 | Ga0495643_0009084 | |||
| 380 | Ga0495648_0000123 | |||
| 381 | Ga0495663_0000408 | |||
| 382 | Ga0495633_0001117 | |||
| 383 | Ga0495668_0000004 | |||
| 384 | Ga0495668_0027168 | |||
| 385 | Ga0495668_0052790 | |||
| 386 | Ga0495668_0070376 | |||
| 387 | Ga0495611_0006235 | |||
| 388 | Ga0495625_0000769 | |||
| 389 | Ga0495625_0001233 | |||
| 390 | Ga0495625_0020297 | |||
| 391 | Ga0495671_0000248 | |||
| 392 | Ga0495649_0051701 | |||
| 393 | Ga0495683_0000751 | |||
| 394 | Ga0495687_000181 | |||
| 395 | Ga0495687_000286 | |||
| 396 | Ga0495677_0000613 | |||
| 397 | Ga0495677_0011332 | |||
| 398 | Ga0495677_0062967 | |||
| 399 | Ga0495673_0000438 | |||
| 400 | Ga0495681_0009667 | |||
| 401 | Ga0495681_0024674 | |||
| 402 | Ga0496102_0001778 | |||
| 403 | Ga0496103_0000784 | |||
| 404 | Ga0496104_0004119 | |||
| 405 | Ga0496109_0088439 | |||
| 406 | Ga0496111_0010542 | |||
| 407 | Ga0496114_0004207 | |||
| 408 | Ga0496114_0495258 | |||
| 409 | Ga0496115_0000783 | |||
| 410 | Ga0496115_0055227 | |||
| 411 | Ga0496116_0011220 | |||
| 412 | Ga0496117_0003485 | |||
| 413 | Ga0496117_0137096 | |||
| 414 | Ga0496118_0000154 | |||
| 415 | Ga0496119_0011995 | |||
| 416 | Ga0496121_0000226 | |||
| 417 | Ga0496121_0000489 | |||
| 418 | Ga0496121_0004555 | |||
| 419 | Ga0496124_0000232 | |||
| 420 | Ga0496125_0003831 | |||
| 421 | Ga0496125_0067566 | |||
| 422 | Ga0496126_0000501 | |||
| 423 | Ga0496126_0006415 | |||
| 424 | Ga0495682_0043381 | |||
| 425 | Ga0501033_0044077 | |||
| 426 | Ga0501034_0063312 | |||
| 427 | Ga0501043_0142121 | |||
| 428 | Ga0501241_002884 | |||
| 429 | Ga0501241_008097 | |||
| 430 | Ga0501035_0008004 | |||
| 431 | Ga0501035_0428637 | |||
| 432 | Ga0501044_0239772 | |||
| 433 | Ga0501044_0355011 | |||
| 434 | nmdc:mga03683_39923_c1 | |||
| 435 | nmdc:mga03683_6914_c1 | |||
| 436 | nmdc:mga00v17_131015_c1 | |||
| 437 | nmdc:mga00v17_797_c1 | |||
| 438 | nmdc:mga0k408_12410_c1 | |||
| 439 | nmdc:mga06z11_221_c1 | |||
| 440 | nmdc:mga07m45_105_c1 | |||
| 441 | Ga0500610_0000579 | |||
| 442 | Ga0500635_0000236 | |||
| 443 | Ga0500643_003186 | |||
| 444 | Ga0500643_007128 | |||
| 445 | Ga0500643_030154 | |||
| 446 | Ga0500583_0008408 | |||
| 447 | Ga0500651_0007376 | |||
| 448 | Ga0500555_002125 | |||
| 449 | Ga0500562_004095 | |||
| 450 | Ga0500595_001907 | |||
| 451 | Ga0500608_000109 | |||
| 452 | Ga0500642_0000007 | |||
| 453 | Ga0500573_0000021 | |||
| 454 | Ga0500573_0110056 | |||
| 455 | Ga0500616_0007393 | |||
| 456 | Ga0500622_0001669 | |||
| 457 | Ga0500622_0004785 | |||
| 458 | Ga0500645_000083 | |||
| 459 | Ga0500645_001618 | |||
| 460 | 2643819508 | |||
| 461 | 2809066061 | |||
| 462 | 2809082082 | |||
| 463 | 2809086450 | |||
| 464 | 2880520943 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4zyo-assembly1.cif.gz_A | crystal structure of human integral membrane stearoyl-coa desaturase with substrate | 0.7906 | 19 | 293 |
| 4ymk-assembly2.cif.gz_D | crystal structure of stearoyl-coenzyme a desaturase 1 | 0.7432 | 12 | 303 |
| 4zyo-assembly1.cif.gz_A | crystal structure of human integral membrane stearoyl-coa desaturase with substrate | 0.7343 | 19 | 293 |
| 4ymk-assembly2.cif.gz_D | crystal structure of stearoyl-coenzyme a desaturase 1 | 0.7 | 12 | 303 |
| 8sbb-assembly1.cif.gz_A | cryo-em structure of ftalkb | 0.3848 | 35 | 286 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R4J2X1_81_350_3.30.40.10 | Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) | 0.522 | 48 | 285 | 3.30.40.10 |
| af_A0A0R4J2X1_81_350_3.30.40.10 | Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) | 0.4712 | 48 | 285 | 3.30.40.10 |
| af_P9WJX1_217_406_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.294 | 36 | 216 | 1.20.1250.20 |
| af_Q23554_133_405_1.10.510.10 | Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 | 0.2922 | 12 | 89 | 1.10.510.10 |
| af_Q5AAP8_56_244_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.2897 | 38 | 216 | 1.20.1250.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3CS93-F1-model_v4 | Acyl-CoA desaturase | 0.9825 | 10 | 309 |
GO:0006633
GO:0016020 GO:0016717 |
| AF-A0A6G6REF8-F1-model_v4 | deleted | 0.9816 | 9 | 308 |
|
| AF-A0A4Q3CS93-F1-model_v4 | Acyl-CoA desaturase | 0.9761 | 10 | 309 |
GO:0006633
GO:0016020 GO:0016717 |
| AF-A0A4Q5QMX2-F1-model_v4 | Acyl-CoA desaturase | 0.9749 | 14 | 268 |
GO:0006633
GO:0016020 GO:0016717 |
| AF-A0A4V3DIR9-F1-model_v4 | Stearoyl-CoA desaturase (Delta-9 desaturase) | 0.9736 | 18 | 307 |
GO:0016020
GO:0016717 GO:0042761 |