F345239
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 232 | 190 | 464 | 234 |
Family's Representative Sequence
| Representative Sequence | 3300032004|Ga0307414_10035596|Ga0307414_100355962 |
| Length | 280 |
| Sequence | MTDTPYASPVAIAEALLSSTRVAVLTGAGMSAESGIPTFRGSRNGLWAEFDPQQLATPAAFRRDPPLVWAWYRWRTALVEQAVPNAGHQAIAQLERLKEGVVVITQNVDDLHERAGSSNVLHLHGSLFEPRCLACARPHPHESAAGPEGAQRQGRTIGPGASTPEAALRVSPPACTHCGGPVRPGVVWFGEGLPAATWNRATRALEDCDALLVVGTSGVVQPAASLPRLVKQRGKPVIEINPDTSEITHGADIHWNTTAAEGLPRIVELLGARHAAGGPT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 2 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 3 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 4 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 5 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 6 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 7 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 8 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 9 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 10 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 11 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 12 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 13 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 14 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 15 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 16 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 17 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 18 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 23 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 24 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 30 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 32 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 33 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 34 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 35 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 36 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 37 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 38 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 39 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 40 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 41 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 43 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 44 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 45 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 64 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 65 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 68 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 69 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300027252 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300027471 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300027665 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 96 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 97 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 98 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 99 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 100 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 101 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 102 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 103 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 104 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 105 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 106 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 107 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 108 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 109 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 110 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 111 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 112 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 113 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 114 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 115 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 116 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 117 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 118 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 119 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 120 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 121 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 122 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 123 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 124 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 125 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 126 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 127 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 128 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 129 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 130 | 3300042136 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 | Metagenome | Rhizosphere |
| 131 | 3300042137 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 | Metagenome | Rhizosphere |
| 132 | 3300042142 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 | Metagenome | Rhizosphere |
| 133 | 3300042533 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 | Metagenome | Rhizosphere |
| 134 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 135 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 151 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 152 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 153 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 154 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 155 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 156 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 157 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 158 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 159 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 160 | 3300049514 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought | Metagenome | Rhizosphere |
| 161 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 162 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 163 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 164 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 165 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 166 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 167 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 168 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 169 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 170 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 171 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 172 | 2585428045 | Chryseobacterium sp. OV705 | Isolate | Rhizosphere |
| 173 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 174 | 2728369107 | Chryseobacterium kwangjuense KJ1R5 | Isolate | Unclassified |
| 175 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 176 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 177 | 2818991460 | Chitinophaga polysaccharea 1209 | Isolate | Unclassified |
| 178 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 179 | 2842909656 | Pedobacter sp. R-72393 | Isolate | Unclassified |
| 180 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 181 | 2893684298 | Kocuria palustris DSM 11925 | Isolate | Rhizosphere |
| 182 | 2902048731 | Pedobacter ureilyticus THG-T11 | Isolate | Rhizosphere |
| 183 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 184 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 185 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 186 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 187 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 188 | 2977243572 | Chryseobacterium sp. SORGH_AS 447 | Isolate | Unclassified |
| 189 | 2993372514 | Chryseobacterium sp. SLBN-27 | Isolate | Rhizosphere |
| 190 | 8055588893 | Parapedobacter lycopersici KACC 18788 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.95 |
| Metatranscriptomes | 0.43 |
| Isolates | 8.62 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 15.09 |
| Nodule | 0 |
| Rhizoplane | 1.72 |
| Rhizosphere | 72.41 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.59 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0307414_10035596 | 3300032004 | Bacteria | 3315 |
| 2 | JGI24739J22299_10002771 | 3300001989 | Bacteria | 6737 |
| 3 | JGI24739J22299_10003165 | 3300001989 | Bacteria | 6285 |
| 4 | JGI24735J21928_10000014 | 3300002067 | Bacteria | 186670 |
| 5 | JGI25162J39368_1000020 | 3300002737 | Bacteria | 254723 |
| 6 | JGI25162J39368_1002504 | 3300002737 | Bacteria | 7033 |
| 7 | JGI25152J39213_1000075 | 3300002773 | Bacteria | 66427 |
| 8 | JGI25150J39212_1000009 | 3300002774 | Bacteria | 249509 |
| 9 | JGI25151J46595_10000017 | 3300003187 | Bacteria | 249509 |
| 10 | JGI25165J46597_1000436 | 3300003214 | Bacteria | 42359 |
| 11 | JGI25153J46596_10000023 | 3300003215 | Bacteria | 249509 |
| 12 | rootH1_10179993 | 3300003316 | Bacteria | 2357 |
| 13 | rootH2_10076634 | 3300003320 | Bacteria | 4343 |
| 14 | rootH2_10108420 | 3300003320 | Unclassified | 3888 |
| 15 | rootL2_10245035 | 3300003322 | Bacteria | 4309 |
| 16 | rootL2_10298307 | 3300003322 | Bacteria | 2101 |
| 17 | rootH1_10127552 | 3300003323 | Bacteria | 5677 |
| 18 | rootH1_10233984 | 3300003323 | Bacteria | 2199 |
| 19 | rootH1_10271001 | 3300003323 | Bacteria | 1673 |
| 20 | Ga0006562J51391_1030805 | 3300003578 | Bacteria | 1000 |
| 21 | Ga0055534_1001509 | 3300003784 | Bacteria | 9159 |
| 22 | Ga0055531_10000023 | 3300003794 | Bacteria | 165025 |
| 23 | Ga0065714_10064511 | 3300005288 | Bacteria | 45172 |
| 24 | Ga0065714_10099431 | 3300005288 | Bacteria | 1617 |
| 25 | Ga0070658_10082620 | 3300005327 | Bacteria | 2640 |
| 26 | Ga0070676_10000197 | 3300005328 | Bacteria | 25353 |
| 27 | Ga0070683_100123404 | 3300005329 | Bacteria | 2447 |
| 28 | Ga0070670_100000002 | 3300005331 | Bacteria | 568775 |
| 29 | Ga0068869_100282853 | 3300005334 | Bacteria | 1334 |
| 30 | Ga0068868_100107640 | 3300005338 | Bacteria | 2262 |
| 31 | Ga0070668_100041556 | 3300005347 | Bacteria | 3523 |
| 32 | Ga0070669_100004460 | 3300005353 | Bacteria | 10084 |
| 33 | Ga0070671_100000024 | 3300005355 | Bacteria | 122109 |
| 34 | Ga0070673_100163385 | 3300005364 | Bacteria | 1895 |
| 35 | Ga0070678_100004872 | 3300005456 | Bacteria | 7672 |
| 36 | Ga0068867_100000938 | 3300005459 | Bacteria | 19833 |
| 37 | Ga0070672_100067204 | 3300005543 | Bacteria | 2840 |
| 38 | Ga0068855_100070148 | 3300005563 | Bacteria | 4078 |
| 39 | Ga0068857_100375526 | 3300005577 | Bacteria | 1319 |
| 40 | Ga0068856_100003903 | 3300005614 | Bacteria | 14952 |
| 41 | Ga0068852_100000852 | 3300005616 | Bacteria | 20278 |
| 42 | Ga0081455_10002567 | 3300005937 | Bacteria | 21554 |
| 43 | Ga0075365_10020298 | 3300006038 | Bacteria | 4117 |
| 44 | Ga0075368_10011590 | 3300006042 | Bacteria | 3209 |
| 45 | Ga0075363_100004912 | 3300006048 | Bacteria | 5911 |
| 46 | Ga0075364_10013248 | 3300006051 | Bacteria | 5062 |
| 47 | Ga0075364_10064077 | 3300006051 | Bacteria | 2412 |
| 48 | Ga0075367_10014274 | 3300006178 | Bacteria | 4296 |
| 49 | Ga0097621_100000152 | 3300006237 | Bacteria | 42727 |
| 50 | Ga0075370_10002454 | 3300006353 | Bacteria | 8600 |
| 51 | Ga0068871_100000229 | 3300006358 | Bacteria | 39643 |
| 52 | Ga0068865_100000505 | 3300006881 | Bacteria | 21848 |
| 53 | Ga0105244_10027039 | 3300009036 | Bacteria | 3097 |
| 54 | Ga0105240_10023021 | 3300009093 | Bacteria | 8250 |
| 55 | Ga0105240_10035927 | 3300009093 | Bacteria | 6380 |
| 56 | Ga0105241_10000630 | 3300009174 | Bacteria | 26536 |
| 57 | Ga0105242_10008805 | 3300009176 | Bacteria | 7743 |
| 58 | Ga0105237_10000356 | 3300009545 | Bacteria | 64629 |
| 59 | Ga0105238_10012017 | 3300009551 | Bacteria | 8723 |
| 60 | Ga0105239_10000081 | 3300010375 | Bacteria | 133686 |
| 61 | Ga0157373_10118095 | 3300013100 | Bacteria | 1864 |
| 62 | Ga0157373_10166633 | 3300013100 | Bacteria | 1550 |
| 63 | Ga0157371_10000382 | 3300013102 | Bacteria | 55677 |
| 64 | Ga0157371_10005952 | 3300013102 | Bacteria | 10180 |
| 65 | Ga0157370_10268604 | 3300013104 | Bacteria | 1576 |
| 66 | Ga0157370_10379631 | 3300013104 | Bacteria | 1302 |
| 67 | Ga0157369_10000006 | 3300013105 | Bacteria | 412230 |
| 68 | Ga0157369_10096941 | 3300013105 | Bacteria | 3146 |
| 69 | Ga0157369_10372626 | 3300013105 | Bacteria | 1482 |
| 70 | Ga0157374_10001305 | 3300013296 | Bacteria | 21219 |
| 71 | Ga0157378_10930302 | 3300013297 | Bacteria | 901 |
| 72 | Ga0163162_10008093 | 3300013306 | Bacteria | 10261 |
| 73 | Ga0163162_10018214 | 3300013306 | Bacteria | 6877 |
| 74 | Ga0163162_10317786 | 3300013306 | Bacteria | 1690 |
| 75 | Ga0163162_10415483 | 3300013306 | Bacteria | 1477 |
| 76 | Ga0157372_10000372 | 3300013307 | Bacteria | 49527 |
| 77 | Ga0157372_10006491 | 3300013307 | Bacteria | 12448 |
| 78 | Ga0157372_10159071 | 3300013307 | Bacteria | 2610 |
| 79 | Ga0157375_10251758 | 3300013308 | Unclassified | 1927 |
| 80 | Ga0157379_10694526 | 3300014968 | Bacteria | 955 |
| 81 | Ga0157376_10027385 | 3300014969 | Bacteria | 4517 |
| 82 | Ga0182006_1000689 | 3300015261 | Bacteria | 23570 |
| 83 | Ga0182007_10000001 | 3300015262 | Bacteria | 1127301 |
| 84 | Ga0182007_10023608 | 3300015262 | Bacteria | 2161 |
| 85 | Ga0163161_10000717 | 3300017792 | Bacteria | 26160 |
| 86 | Ga0163161_10000934 | 3300017792 | Bacteria | 22533 |
| 87 | Ga0163161_10035456 | 3300017792 | Bacteria | 3571 |
| 88 | Ga0209437_100085 | 3300025233 | Bacteria | 254790 |
| 89 | Ga0207425_1000007 | 3300025245 | Bacteria | 777411 |
| 90 | Ga0209129_1000006 | 3300025258 | Bacteria | 777761 |
| 91 | Ga0209233_1019826 | 3300025261 | Bacteria | 1778 |
| 92 | Ga0209455_1023782 | 3300025272 | Bacteria | 1142 |
| 93 | Ga0209025_1000025 | 3300025294 | Bacteria | 524454 |
| 94 | Ga0209758_1000016 | 3300025297 | Bacteria | 778557 |
| 95 | Ga0209257_1000013 | 3300025304 | Bacteria | 1047305 |
| 96 | Ga0207642_10091749 | 3300025899 | Bacteria | 1502 |
| 97 | Ga0207647_10000356 | 3300025904 | Bacteria | 37148 |
| 98 | Ga0207645_10001018 | 3300025907 | Bacteria | 23159 |
| 99 | Ga0207654_10006453 | 3300025911 | Bacteria | 5904 |
| 100 | Ga0207695_10048347 | 3300025913 | Bacteria | 4493 |
| 101 | Ga0207694_10084130 | 3300025924 | Bacteria | 2502 |
| 102 | Ga0207644_10000013 | 3300025931 | Bacteria | 185370 |
| 103 | Ga0207690_10059441 | 3300025932 | Bacteria | 2590 |
| 104 | Ga0207704_10002319 | 3300025938 | Bacteria | 8551 |
| 105 | Ga0207691_10093641 | 3300025940 | Bacteria | 2689 |
| 106 | Ga0207667_10057533 | 3300025949 | Bacteria | 4081 |
| 107 | Ga0207651_10021888 | 3300025960 | Bacteria | 3895 |
| 108 | Ga0207677_10127180 | 3300026023 | Bacteria | 1928 |
| 109 | Ga0207702_10008728 | 3300026078 | Bacteria | 8547 |
| 110 | Ga0207648_10000155 | 3300026089 | Bacteria | 69524 |
| 111 | Ga0207683_10000968 | 3300026121 | Bacteria | 26291 |
| 112 | Ga0207698_10009588 | 3300026142 | Bacteria | 6183 |
| 113 | Ga0209973_1006740 | 3300027252 | Bacteria | 1263 |
| 114 | Ga0209995_1020849 | 3300027471 | Bacteria | 1085 |
| 115 | Ga0209983_1007526 | 3300027665 | Bacteria | 2231 |
| 116 | Ga0209971_1000783 | 3300027682 | Bacteria | 8184 |
| 117 | Ga0209813_10028041 | 3300027866 | Bacteria | 1639 |
| 118 | Ga0265337_1000005 | 3300028556 | Bacteria | 104147 |
| 119 | Ga0265326_10000029 | 3300028558 | Bacteria | 97443 |
| 120 | Ga0265319_1000056 | 3300028563 | Bacteria | 88093 |
| 121 | Ga0265334_10000052 | 3300028573 | Bacteria | 85560 |
| 122 | Ga0265334_10148514 | 3300028573 | Unclassified | 827 |
| 123 | Ga0265323_10000177 | 3300028653 | Bacteria | 38133 |
| 124 | Ga0265322_10000022 | 3300028654 | Bacteria | 102594 |
| 125 | Ga0265336_10000073 | 3300028666 | Bacteria | 83573 |
| 126 | Ga0307515_10000223 | 3300028794 | Bacteria | 140434 |
| 127 | Ga0307515_10004006 | 3300028794 | Bacteria | 30751 |
| 128 | Ga0265338_10000348 | 3300028800 | Bacteria | 84143 |
| 129 | Ga0265324_10000033 | 3300029957 | Bacteria | 124454 |
| 130 | Ga0265320_10000169 | 3300031240 | Bacteria | 54995 |
| 131 | Ga0265325_10125267 | 3300031241 | Unclassified | 1235 |
| 132 | Ga0265340_10004597 | 3300031247 | Bacteria | 7684 |
| 133 | Ga0265339_10079199 | 3300031249 | Unclassified | 1739 |
| 134 | Ga0265331_10051794 | 3300031250 | Bacteria | 1964 |
| 135 | Ga0265327_10003314 | 3300031251 | Bacteria | 15588 |
| 136 | Ga0307408_100001355 | 3300031548 | Bacteria | 18314 |
| 137 | Ga0307408_100001379 | 3300031548 | Bacteria | 18106 |
| 138 | Ga0307408_100211160 | 3300031548 | Bacteria | 1577 |
| 139 | Ga0307508_10000357 | 3300031616 | Bacteria | 55613 |
| 140 | Ga0265342_10019756 | 3300031712 | Bacteria | 4335 |
| 141 | Ga0307407_10000009 | 3300031903 | Bacteria | 188746 |
| 142 | Ga0307412_10000006 | 3300031911 | Bacteria | 506878 |
| 143 | Ga0307412_10000400 | 3300031911 | Bacteria | 26429 |
| 144 | Ga0307412_10076377 | 3300031911 | Bacteria | 2301 |
| 145 | Ga0307409_100250153 | 3300031995 | Bacteria | 1620 |
| 146 | Ga0307416_100000019 | 3300032002 | Bacteria | 199706 |
| 147 | Ga0307416_100388144 | 3300032002 | Bacteria | 1429 |
| 148 | Ga0307414_10056578 | 3300032004 | Bacteria | 2752 |
| 149 | Ga0307411_10328613 | 3300032005 | Bacteria | 1238 |
| 150 | Ga0307507_10000170 | 3300033179 | Bacteria | 116878 |
| 151 | Ga0316582_0106885 | 3300036647 | Bacteria | 1859 |
| 152 | Ga0400490_35577 | 3300038726 | Bacteria | 1474 |
| 153 | Ga0400488_19434 | 3300038741 | Bacteria | 2454 |
| 154 | Ga0436361_1023739 | 3300039447 | Bacteria | 21486 |
| 155 | Ga0439436_0011704 | 3300041404 | Bacteria | 2665 |
| 156 | Ga0439465_0000948 | 3300041413 | Bacteria | 9197 |
| 157 | Ga0439445_0005482 | 3300042004 | Bacteria | 2892 |
| 158 | Ga0439445_0007618 | 3300042004 | Bacteria | 2517 |
| 159 | Ga0439449_0000076 | 3300042007 | Bacteria | 31541 |
| 160 | Ga0439457_017254 | 3300042014 | Bacteria | 1604 |
| 161 | Ga0450900_002675 | 3300042136 | Bacteria | 1914 |
| 162 | Ga0450902_000037 | 3300042137 | Bacteria | 11581 |
| 163 | Ga0450905_000018 | 3300042142 | Bacteria | 15231 |
| 164 | Ga0450901_000111 | 3300042533 | Bacteria | 8881 |
| 165 | Ga0453684_0599694 | 3300044712 | Unclassified | 1207 |
| 166 | Ga0495651_0255919 | 3300046462 | Bacteria | 1193 |
| 167 | Ga0495650_0000003 | 3300046471 | Bacteria | 900730 |
| 168 | Ga0495650_0094798 | 3300046471 | Bacteria | 1129 |
| 169 | Ga0495605_0000519 | 3300046474 | Bacteria | 32840 |
| 170 | Ga0495585_0000085 | 3300046492 | Bacteria | 97836 |
| 171 | Ga0495585_0001889 | 3300046492 | Bacteria | 15797 |
| 172 | Ga0495606_0000145 | 3300046507 | Bacteria | 122857 |
| 173 | Ga0495606_0044268 | 3300046507 | Bacteria | 2962 |
| 174 | Ga0495610_0000028 | 3300046512 | Bacteria | 272572 |
| 175 | Ga0495610_0001185 | 3300046512 | Bacteria | 23579 |
| 176 | Ga0495610_0134413 | 3300046512 | Bacteria | 1071 |
| 177 | Ga0495616_0009353 | 3300046513 | Bacteria | 5743 |
| 178 | Ga0495616_0111408 | 3300046513 | Bacteria | 1271 |
| 179 | Ga0495637_0055992 | 3300046520 | Bacteria | 1634 |
| 180 | Ga0495644_0097133 | 3300046523 | Bacteria | 1113 |
| 181 | Ga0495648_0001649 | 3300046524 | Bacteria | 21669 |
| 182 | Ga0495654_0000003 | 3300046530 | Bacteria | 863485 |
| 183 | Ga0495609_0046167 | 3300046538 | Bacteria | 1951 |
| 184 | Ga0495633_0000081 | 3300046558 | Bacteria | 125903 |
| 185 | Ga0495633_0148879 | 3300046558 | Bacteria | 1081 |
| 186 | Ga0495611_0062699 | 3300046648 | Bacteria | 1691 |
| 187 | Ga0495625_0000005 | 3300046660 | Bacteria | 596135 |
| 188 | Ga0495625_0001508 | 3300046660 | Bacteria | 27981 |
| 189 | Ga0495625_0003593 | 3300046660 | Bacteria | 15258 |
| 190 | Ga0495625_0093456 | 3300046660 | Bacteria | 2076 |
| 191 | Ga0495661_0007842 | 3300046665 | Bacteria | 7427 |
| 192 | Ga0495671_0232104 | 3300046692 | Bacteria | 892 |
| 193 | Ga0495649_0000003 | 3300046694 | Bacteria | 880817 |
| 194 | Ga0495687_000672 | 3300047443 | Bacteria | 38920 |
| 195 | Ga0495686_0001125 | 3300047472 | Bacteria | 31631 |
| 196 | Ga0496108_0000007 | 3300048911 | Bacteria | 351492 |
| 197 | Ga0496110_0558531 | 3300048913 | Bacteria | 1040 |
| 198 | Ga0496114_0000886 | 3300048917 | Bacteria | 22421 |
| 199 | Ga0496124_0221148 | 3300048927 | Bacteria | 1424 |
| 200 | Ga0495678_011131 | 3300049459 | Bacteria | 4323 |
| 201 | Ga0501291_012519 | 3300049514 | Bacteria | 1240 |
| 202 | Ga0501225_0010414 | 3300049705 | Bacteria | 2633 |
| 203 | nmdc:mga03683_14186_c2 | 3300050489 | Bacteria | 2565 |
| 204 | nmdc:mga03n38_1586_c1 | 3300050490 | Bacteria | 6622 |
| 205 | nmdc:mga00v17_272607_c1 | 3300050491 | Bacteria | 1098 |
| 206 | nmdc:mga00v17_39138_c1 | 3300050491 | Bacteria | 2838 |
| 207 | nmdc:mga0yw44_12173_c1 | 3300050492 | Bacteria | 4473 |
| 208 | nmdc:mga0k408_25443_c1 | 3300050493 | Bacteria | 3352 |
| 209 | nmdc:mga04h51_2337_c1 | 3300050495 | Bacteria | 4488 |
| 210 | nmdc:mga07m45_15108_c1 | 3300050496 | Bacteria | 4123 |
| 211 | Ga0500618_003765 | 3300053125 | Bacteria | 5076 |
| 212 | Ga0500624_008816 | 3300053157 | Bacteria | 1420 |
| 213 | 2586206553 | 2585427687 | Bacteria | 5544917 |
| 214 | 2587679257 | 2585428045 | Bacteria | 5203023 |
| 215 | 2599477698 | 2599185184 | Bacteria | 6430550 |
| 216 | 2729201332 | 2728369107 | Bacteria | 5082720 |
| 217 | 2739588534 | 2739367651 | Bacteria | 6359826 |
| 218 | 2819549887 | 2818991437 | Bacteria | 5805520 |
| 219 | 2819678328 | 2818991460 | Bacteria | 7595395 |
| 220 | 2842723677 | 2842722452 | Bacteria | 6263924 |
| 221 | 2842910183 | 2842909656 | Bacteria | 6185908 |
| 222 | 2849285206 | 2849281842 | Bacteria | 6065644 |
| 223 | 2893685648 | 2893684298 | Bacteria | 2897960 |
| 224 | 2902049276 | 2902048731 | Bacteria | 4976191 |
| 225 | 2928079612 | 2928078545 | Bacteria | 6534839 |
| 226 | 2928147912 | 2928147474 | Bacteria | 6512076 |
| 227 | 2932086762 | 2932082852 | Bacteria | 6563563 |
| 228 | 2946000478 | 2945997725 | Bacteria | 6404843 |
| 229 | 2954017416 | 2954016120 | Bacteria | 6446024 |
| 230 | 2977243975 | 2977243572 | Bacteria | 4374394 |
| 231 | 2993375452 | 2993372514 | Bacteria | 4214139 |
| 232 | 8055589270 | 8055588893 | Bacteria | 3619545 |
| 233 | Ga0307414_10035596 | |||
| 234 | JGI24739J22299_10002771 | |||
| 235 | JGI24739J22299_10003165 | |||
| 236 | JGI24735J21928_10000014 | |||
| 237 | JGI25162J39368_1000020 | |||
| 238 | JGI25162J39368_1002504 | |||
| 239 | JGI25152J39213_1000075 | |||
| 240 | JGI25150J39212_1000009 | |||
| 241 | JGI25151J46595_10000017 | |||
| 242 | JGI25165J46597_1000436 | |||
| 243 | JGI25153J46596_10000023 | |||
| 244 | rootH1_10179993 | |||
| 245 | rootH2_10076634 | |||
| 246 | rootH2_10108420 | |||
| 247 | rootL2_10245035 | |||
| 248 | rootL2_10298307 | |||
| 249 | rootH1_10127552 | |||
| 250 | rootH1_10233984 | |||
| 251 | rootH1_10271001 | |||
| 252 | Ga0006562J51391_1030805 | |||
| 253 | Ga0055534_1001509 | |||
| 254 | Ga0055531_10000023 | |||
| 255 | Ga0065714_10064511 | |||
| 256 | Ga0065714_10099431 | |||
| 257 | Ga0070658_10082620 | |||
| 258 | Ga0070676_10000197 | |||
| 259 | Ga0070683_100123404 | |||
| 260 | Ga0070670_100000002 | |||
| 261 | Ga0068869_100282853 | |||
| 262 | Ga0068868_100107640 | |||
| 263 | Ga0070668_100041556 | |||
| 264 | Ga0070669_100004460 | |||
| 265 | Ga0070671_100000024 | |||
| 266 | Ga0070673_100163385 | |||
| 267 | Ga0070678_100004872 | |||
| 268 | Ga0068867_100000938 | |||
| 269 | Ga0070672_100067204 | |||
| 270 | Ga0068855_100070148 | |||
| 271 | Ga0068857_100375526 | |||
| 272 | Ga0068856_100003903 | |||
| 273 | Ga0068852_100000852 | |||
| 274 | Ga0081455_10002567 | |||
| 275 | Ga0075365_10020298 | |||
| 276 | Ga0075368_10011590 | |||
| 277 | Ga0075363_100004912 | |||
| 278 | Ga0075364_10013248 | |||
| 279 | Ga0075364_10064077 | |||
| 280 | Ga0075367_10014274 | |||
| 281 | Ga0097621_100000152 | |||
| 282 | Ga0075370_10002454 | |||
| 283 | Ga0068871_100000229 | |||
| 284 | Ga0068865_100000505 | |||
| 285 | Ga0105244_10027039 | |||
| 286 | Ga0105240_10023021 | |||
| 287 | Ga0105240_10035927 | |||
| 288 | Ga0105241_10000630 | |||
| 289 | Ga0105242_10008805 | |||
| 290 | Ga0105237_10000356 | |||
| 291 | Ga0105238_10012017 | |||
| 292 | Ga0105239_10000081 | |||
| 293 | Ga0157373_10118095 | |||
| 294 | Ga0157373_10166633 | |||
| 295 | Ga0157371_10000382 | |||
| 296 | Ga0157371_10005952 | |||
| 297 | Ga0157370_10268604 | |||
| 298 | Ga0157370_10379631 | |||
| 299 | Ga0157369_10000006 | |||
| 300 | Ga0157369_10096941 | |||
| 301 | Ga0157369_10372626 | |||
| 302 | Ga0157374_10001305 | |||
| 303 | Ga0157378_10930302 | |||
| 304 | Ga0163162_10008093 | |||
| 305 | Ga0163162_10018214 | |||
| 306 | Ga0163162_10317786 | |||
| 307 | Ga0163162_10415483 | |||
| 308 | Ga0157372_10000372 | |||
| 309 | Ga0157372_10006491 | |||
| 310 | Ga0157372_10159071 | |||
| 311 | Ga0157375_10251758 | |||
| 312 | Ga0157379_10694526 | |||
| 313 | Ga0157376_10027385 | |||
| 314 | Ga0182006_1000689 | |||
| 315 | Ga0182007_10000001 | |||
| 316 | Ga0182007_10023608 | |||
| 317 | Ga0163161_10000717 | |||
| 318 | Ga0163161_10000934 | |||
| 319 | Ga0163161_10035456 | |||
| 320 | Ga0209437_100085 | |||
| 321 | Ga0207425_1000007 | |||
| 322 | Ga0209129_1000006 | |||
| 323 | Ga0209233_1019826 | |||
| 324 | Ga0209455_1023782 | |||
| 325 | Ga0209025_1000025 | |||
| 326 | Ga0209758_1000016 | |||
| 327 | Ga0209257_1000013 | |||
| 328 | Ga0207642_10091749 | |||
| 329 | Ga0207647_10000356 | |||
| 330 | Ga0207645_10001018 | |||
| 331 | Ga0207654_10006453 | |||
| 332 | Ga0207695_10048347 | |||
| 333 | Ga0207694_10084130 | |||
| 334 | Ga0207644_10000013 | |||
| 335 | Ga0207690_10059441 | |||
| 336 | Ga0207704_10002319 | |||
| 337 | Ga0207691_10093641 | |||
| 338 | Ga0207667_10057533 | |||
| 339 | Ga0207651_10021888 | |||
| 340 | Ga0207677_10127180 | |||
| 341 | Ga0207702_10008728 | |||
| 342 | Ga0207648_10000155 | |||
| 343 | Ga0207683_10000968 | |||
| 344 | Ga0207698_10009588 | |||
| 345 | Ga0209973_1006740 | |||
| 346 | Ga0209995_1020849 | |||
| 347 | Ga0209983_1007526 | |||
| 348 | Ga0209971_1000783 | |||
| 349 | Ga0209813_10028041 | |||
| 350 | Ga0265337_1000005 | |||
| 351 | Ga0265326_10000029 | |||
| 352 | Ga0265319_1000056 | |||
| 353 | Ga0265334_10000052 | |||
| 354 | Ga0265334_10148514 | |||
| 355 | Ga0265323_10000177 | |||
| 356 | Ga0265322_10000022 | |||
| 357 | Ga0265336_10000073 | |||
| 358 | Ga0307515_10000223 | |||
| 359 | Ga0307515_10004006 | |||
| 360 | Ga0265338_10000348 | |||
| 361 | Ga0265324_10000033 | |||
| 362 | Ga0265320_10000169 | |||
| 363 | Ga0265325_10125267 | |||
| 364 | Ga0265340_10004597 | |||
| 365 | Ga0265339_10079199 | |||
| 366 | Ga0265331_10051794 | |||
| 367 | Ga0265327_10003314 | |||
| 368 | Ga0307408_100001355 | |||
| 369 | Ga0307408_100001379 | |||
| 370 | Ga0307408_100211160 | |||
| 371 | Ga0307508_10000357 | |||
| 372 | Ga0265342_10019756 | |||
| 373 | Ga0307407_10000009 | |||
| 374 | Ga0307412_10000006 | |||
| 375 | Ga0307412_10000400 | |||
| 376 | Ga0307412_10076377 | |||
| 377 | Ga0307409_100250153 | |||
| 378 | Ga0307416_100000019 | |||
| 379 | Ga0307416_100388144 | |||
| 380 | Ga0307414_10056578 | |||
| 381 | Ga0307411_10328613 | |||
| 382 | Ga0307507_10000170 | |||
| 383 | Ga0316582_0106885 | |||
| 384 | Ga0400490_35577 | |||
| 385 | Ga0400488_19434 | |||
| 386 | Ga0436361_1023739 | |||
| 387 | Ga0439436_0011704 | |||
| 388 | Ga0439465_0000948 | |||
| 389 | Ga0439445_0005482 | |||
| 390 | Ga0439445_0007618 | |||
| 391 | Ga0439449_0000076 | |||
| 392 | Ga0439457_017254 | |||
| 393 | Ga0450900_002675 | |||
| 394 | Ga0450902_000037 | |||
| 395 | Ga0450905_000018 | |||
| 396 | Ga0450901_000111 | |||
| 397 | Ga0453684_0599694 | |||
| 398 | Ga0495651_0255919 | |||
| 399 | Ga0495650_0000003 | |||
| 400 | Ga0495650_0094798 | |||
| 401 | Ga0495605_0000519 | |||
| 402 | Ga0495585_0000085 | |||
| 403 | Ga0495585_0001889 | |||
| 404 | Ga0495606_0000145 | |||
| 405 | Ga0495606_0044268 | |||
| 406 | Ga0495610_0000028 | |||
| 407 | Ga0495610_0001185 | |||
| 408 | Ga0495610_0134413 | |||
| 409 | Ga0495616_0009353 | |||
| 410 | Ga0495616_0111408 | |||
| 411 | Ga0495637_0055992 | |||
| 412 | Ga0495644_0097133 | |||
| 413 | Ga0495648_0001649 | |||
| 414 | Ga0495654_0000003 | |||
| 415 | Ga0495609_0046167 | |||
| 416 | Ga0495633_0000081 | |||
| 417 | Ga0495633_0148879 | |||
| 418 | Ga0495611_0062699 | |||
| 419 | Ga0495625_0000005 | |||
| 420 | Ga0495625_0001508 | |||
| 421 | Ga0495625_0003593 | |||
| 422 | Ga0495625_0093456 | |||
| 423 | Ga0495661_0007842 | |||
| 424 | Ga0495671_0232104 | |||
| 425 | Ga0495649_0000003 | |||
| 426 | Ga0495687_000672 | |||
| 427 | Ga0495686_0001125 | |||
| 428 | Ga0496108_0000007 | |||
| 429 | Ga0496110_0558531 | |||
| 430 | Ga0496114_0000886 | |||
| 431 | Ga0496124_0221148 | |||
| 432 | Ga0495678_011131 | |||
| 433 | Ga0501291_012519 | |||
| 434 | Ga0501225_0010414 | |||
| 435 | nmdc:mga03683_14186_c2 | |||
| 436 | nmdc:mga03n38_1586_c1 | |||
| 437 | nmdc:mga00v17_272607_c1 | |||
| 438 | nmdc:mga00v17_39138_c1 | |||
| 439 | nmdc:mga0yw44_12173_c1 | |||
| 440 | nmdc:mga0k408_25443_c1 | |||
| 441 | nmdc:mga04h51_2337_c1 | |||
| 442 | nmdc:mga07m45_15108_c1 | |||
| 443 | Ga0500618_003765 | |||
| 444 | Ga0500624_008816 | |||
| 445 | 2586206553 | |||
| 446 | 2587679257 | |||
| 447 | 2599477698 | |||
| 448 | 2729201332 | |||
| 449 | 2739588534 | |||
| 450 | 2819549887 | |||
| 451 | 2819678328 | |||
| 452 | 2842723677 | |||
| 453 | 2842910183 | |||
| 454 | 2849285206 | |||
| 455 | 2893685648 | |||
| 456 | 2902049276 | |||
| 457 | 2928079612 | |||
| 458 | 2928147912 | |||
| 459 | 2932086762 | |||
| 460 | 2946000478 | |||
| 461 | 2954017416 | |||
| 462 | 2977243975 | |||
| 463 | 2993375452 | |||
| 464 | 8055589270 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6rxl-assembly1.cif.gz_A | crystal structure of cobb wt in complex with h4k16-crotonyl peptide | 0.9229 | 1 | 227 |
| 1m2j-assembly1.cif.gz_A | sir2 homologue h80n mutant-adp ribose complex | 0.9217 | 2 | 227 |
| 6rxm-assembly1.cif.gz_A | crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16-acetyl peptide | 0.9198 | 1 | 227 |
| 1m2h-assembly1.cif.gz_A | sir2 homologue s24a mutant-adp ribose complex | 0.9185 | 2 | 227 |
| 1m2k-assembly1.cif.gz_A | sir2 homologue f159a mutant-adp ribose complex | 0.9152 | 2 | 227 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1s5pA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.8928 | 1 | 227 | 3.40.50.1220 |
| af_P75960_40_271_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.8852 | 1 | 226 | 3.40.50.1220 |
| af_A4IAM7_70_238_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.8793 | 65 | 226 | 3.40.50.1220 |
| af_P75960_40_271_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.8741 | 1 | 226 | 3.40.50.1220 |
| af_Q8IE47_10_269_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.8686 | 2 | 227 | 3.40.50.1220 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A354XMH6-F1-model_v4 | protein acetyllysine N-acetyltransferase (EC 2.3.1.286) | 0.9887 | 74 | 193 |
GO:0017136
GO:0070403 |
| AF-A0A7Y6PIU5-F1-model_v4 | NAD-dependent deacylase | 0.9834 | 66 | 164 |
GO:0017136
GO:0070403 |
| AF-A0A0F9AUZ7-F1-model_v4 | Deacetylase sirtuin-type domain-containing protein | 0.9823 | 1 | 107 |
GO:0017136
GO:0070403 |
| AF-A0A7H0VAU3-F1-model_v4 | NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) | 0.9814 | 2 | 228 |
GO:0005737
GO:0032041 GO:0036054 GO:0036055 GO:0046969 GO:0046970 GO:0070403 GO:0097372 GO:0140765 GO:0141222 |
| AF-R5RZ55-F1-model_v4 | deleted | 0.9799 | 1 | 227 |
|