F345413

General Info

Members Datasets Scaffolds Average Seq Length
232 133 464 291

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0155373|Ga0495668_0155373_138_1112
Length 324
Sequence LLNAIISGDLALHLPFCTINYLHLYPVPADLAMKFTFILLLIFPPFFAFCQEDFSSHYKIYDTKNQKVISVDDIITNVNEANVLFFGEEHSDSTCHVLESIIFNKMAIKYPGKVTLSMEMFETDCQSVLNEYLNGLIREKNFITEARAWHNYKDYRPLIELAKAQHIPVIAANAPARYVNMANRMGLNSLQGLDATGKAWLPPLPIDTATGAYYEKFLQIMGGHASMGGMQMYQAQNLWDATMGWSIGRFFKKHKDYKIFQINGGFHSEEKLGVTAQLKKYASKVKVINIACFDDENFENPDWSKFSKNNDYIILTDPKLPKTY

Samples

Sample ID Description Type Environment
1 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
58 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
59 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
60 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
61 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
99 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
100 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
101 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
102 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
103 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
104 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
105 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
106 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
107 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
108 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
111 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
112 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
113 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
114 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
115 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
116 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
119 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
123 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
124 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
125 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
126 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
127 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
128 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
129 2914759650 Rhizosphaericola mali Isolate Rhizosphere
130 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
131 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
132 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
133 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.55
Metatranscriptomes 0
Isolates 3.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.9
Nodule 0
Rhizoplane 0.43
Rhizosphere 84.05
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495668_0155373 3300046616 Bacteria 1253
2 JGI24736J21556_1001166 3300001904 Bacteria 4816
3 JGI24740J21852_10026476 3300001979 Bacteria 1942
4 JGI24740J21852_10066882 3300001979 Bacteria 974
5 JGI24737J22298_10002444 3300001990 Bacteria 6615
6 JGI25162J39368_1000022 3300002737 Bacteria 239510
7 JGI25162J39368_1004019 3300002737 Bacteria 3708
8 JGI25157J39369_1006377 3300002741 Bacteria 1802
9 JGI25164J39214_1002200 3300002772 Bacteria 3223
10 JGI25165J46597_1001355 3300003214 Bacteria 13645
11 rootH1_10091478 3300003316 Bacteria 1438
12 rootH2_10016199 3300003320 Bacteria 99895
13 rootH2_10098625 3300003320 Bacteria 2783
14 rootH2_10280781 3300003320 Bacteria 1578
15 rootL2_10035189 3300003322 Bacteria 1096
16 rootL2_10172720 3300003322 Bacteria 1200
17 rootH1_10059671 3300003323 Bacteria 1402
18 rootH1_10090045 3300003323 Bacteria 5892
19 rootH1_10165442 3300003323 Bacteria 2077
20 Ga0065714_10090626 3300005288 Bacteria 1937
21 Ga0070658_10000091 3300005327 Bacteria 81263
22 Ga0070658_10051517 3300005327 Bacteria 3336
23 Ga0070658_10178328 3300005327 Bacteria 1787
24 Ga0070676_10000081 3300005328 Bacteria 32936
25 Ga0070683_100038346 3300005329 Bacteria 4392
26 Ga0070680_100160295 3300005336 Bacteria 1890
27 Ga0068868_100074928 3300005338 Bacteria 2704
28 Ga0070660_100046015 3300005339 Bacteria 3343
29 Ga0070673_100105058 3300005364 Bacteria 2333
30 Ga0070659_100002833 3300005366 Bacteria 12352
31 Ga0070662_100000011 3300005457 Bacteria 133652
32 Ga0070662_100344392 3300005457 Bacteria 1220
33 Ga0070681_10013859 3300005458 Bacteria 8022
34 Ga0068867_100003978 3300005459 Bacteria 10394
35 Ga0070679_100057842 3300005530 Bacteria 3864
36 Ga0070684_100069204 3300005535 Bacteria 3104
37 Ga0068853_100036053 3300005539 Bacteria 4204
38 Ga0068853_100156831 3300005539 Bacteria 2051
39 Ga0070665_100000003 3300005548 Bacteria 811857
40 Ga0068855_100001132 3300005563 Bacteria 33103
41 Ga0068855_100001166 3300005563 Bacteria 32578
42 Ga0068855_100014194 3300005563 Bacteria 9597
43 Ga0068855_100018636 3300005563 Bacteria 8348
44 Ga0068855_100067360 3300005563 Bacteria 4171
45 Ga0068854_100011674 3300005578 Bacteria 5729
46 Ga0068856_100000015 3300005614 Bacteria 157353
47 Ga0068856_100008017 3300005614 Bacteria 10310
48 Ga0068856_100069445 3300005614 Bacteria 3484
49 Ga0068856_100186488 3300005614 Bacteria 2088
50 Ga0068852_100000527 3300005616 Bacteria 25187
51 Ga0068851_10129581 3300005834 Bacteria 1363
52 Ga0075366_10017422 3300006195 Bacteria 4134
53 Ga0097621_100000150 3300006237 Bacteria 42846
54 Ga0075370_10065458 3300006353 Bacteria 2073
55 Ga0068871_100000045 3300006358 Bacteria 67014
56 Ga0068865_100000170 3300006881 Bacteria 36005
57 Ga0105240_10000200 3300009093 Bacteria 121941
58 Ga0105240_10016113 3300009093 Bacteria 10128
59 Ga0105240_10018761 3300009093 Bacteria 9267
60 Ga0105240_10174749 3300009093 Bacteria 2540
61 Ga0105240_10198238 3300009093 Bacteria 2355
62 Ga0105240_10872342 3300009093 Bacteria 970
63 Ga0105241_10000268 3300009174 Bacteria 38825
64 Ga0105241_10001680 3300009174 Bacteria 16832
65 Ga0105241_10058239 3300009174 Bacteria 2967
66 Ga0105241_10247744 3300009174 Bacteria 1509
67 Ga0105242_10024575 3300009176 Bacteria 4760
68 Ga0105237_10000239 3300009545 Bacteria 78319
69 Ga0105237_10000513 3300009545 Bacteria 54795
70 Ga0105237_10002150 3300009545 Bacteria 24816
71 Ga0105237_10012720 3300009545 Bacteria 8855
72 Ga0105237_10013380 3300009545 Bacteria 8606
73 Ga0105237_10233308 3300009545 Bacteria 1841
74 Ga0105237_10301917 3300009545 Bacteria 1604
75 Ga0105237_10365392 3300009545 Bacteria 1448
76 Ga0105238_10006131 3300009551 Bacteria 11933
77 Ga0105239_10000006 3300010375 Bacteria 442319
78 Ga0105239_10000094 3300010375 Bacteria 124925
79 Ga0105239_10001108 3300010375 Bacteria 37145
80 Ga0105239_10001646 3300010375 Bacteria 29459
81 Ga0105239_10001742 3300010375 Bacteria 28684
82 Ga0105239_10037098 3300010375 Bacteria 5346
83 Ga0105239_10296103 3300010375 Bacteria 1822
84 Ga0105246_10287845 3300011119 Bacteria 1321
85 Ga0157373_10000181 3300013100 Bacteria 51804
86 Ga0157373_10001187 3300013100 Bacteria 19931
87 Ga0157373_10051501 3300013100 Bacteria 2932
88 Ga0157371_10000141 3300013102 Bacteria 104396
89 Ga0157371_10002498 3300013102 Bacteria 17481
90 Ga0157371_10017160 3300013102 Bacteria 5382
91 Ga0157371_10070395 3300013102 Bacteria 2476
92 Ga0157369_10000295 3300013105 Bacteria 66502
93 Ga0157369_10156034 3300013105 Bacteria 2411
94 Ga0157374_10000277 3300013296 Bacteria 47639
95 Ga0157374_10009397 3300013296 Bacteria 8391
96 Ga0157374_10424551 3300013296 Bacteria 1328
97 Ga0157374_10513433 3300013296 Bacteria 1204
98 Ga0157378_10047691 3300013297 Bacteria 3809
99 Ga0157378_10111753 3300013297 Bacteria 2505
100 Ga0163162_10000024 3300013306 Bacteria 188515
101 Ga0163162_10003927 3300013306 Bacteria 14267
102 Ga0163162_10174637 3300013306 Bacteria 2274
103 Ga0157372_10000015 3300013307 Bacteria 225365
104 Ga0157372_10000700 3300013307 Bacteria 36863
105 Ga0157372_10022859 3300013307 Bacteria 6771
106 Ga0157372_10040601 3300013307 Bacteria 5140
107 Ga0157375_10065963 3300013308 Bacteria 3611
108 Ga0157377_10047944 3300014745 Bacteria 2395
109 Ga0157376_10028787 3300014969 Bacteria 4419
110 Ga0163161_10024430 3300017792 Bacteria 4269
111 Ga0207427_100090 3300025231 Bacteria 133759
112 Ga0209437_100024 3300025233 Bacteria 592878
113 Ga0209437_100034 3300025233 Bacteria 494007
114 Ga0209026_1005845 3300025250 Bacteria 3184
115 Ga0209026_1006911 3300025250 Bacteria 2668
116 Ga0209129_1010877 3300025258 Bacteria 2223
117 Ga0209233_1000038 3300025261 Bacteria 548972
118 Ga0209233_1004109 3300025261 Bacteria 5015
119 Ga0207647_10000051 3300025904 Bacteria 87826
120 Ga0207647_10000405 3300025904 Bacteria 35306
121 Ga0207645_10000156 3300025907 Bacteria 53492
122 Ga0207643_10117603 3300025908 Bacteria 1571
123 Ga0207705_10000132 3300025909 Bacteria 81270
124 Ga0207654_10001755 3300025911 Bacteria 11263
125 Ga0207654_10099358 3300025911 Bacteria 1790
126 Ga0207707_10113279 3300025912 Bacteria 2371
127 Ga0207695_10000055 3300025913 Bacteria 382776
128 Ga0207695_10005639 3300025913 Bacteria 16519
129 Ga0207695_10006282 3300025913 Bacteria 15463
130 Ga0207695_10017888 3300025913 Bacteria 8212
131 Ga0207695_10387637 3300025913 Bacteria 1282
132 Ga0207671_10001276 3300025914 Bacteria 29637
133 Ga0207671_10001394 3300025914 Bacteria 28081
134 Ga0207671_10003182 3300025914 Bacteria 16564
135 Ga0207671_10006478 3300025914 Bacteria 10423
136 Ga0207671_10191162 3300025914 Bacteria 1596
137 Ga0207660_10017928 3300025917 Bacteria 4713
138 Ga0207657_10052771 3300025919 Bacteria 3527
139 Ga0207652_10012434 3300025921 Bacteria 6880
140 Ga0207644_10021559 3300025931 Bacteria 4391
141 Ga0207706_10000122 3300025933 Bacteria 83838
142 Ga0207669_10122746 3300025937 Bacteria 1767
143 Ga0207704_10000041 3300025938 Bacteria 89976
144 Ga0207661_10044822 3300025944 Bacteria 3498
145 Ga0207667_10000023 3300025949 Bacteria 362527
146 Ga0207667_10000993 3300025949 Bacteria 36313
147 Ga0207667_10040635 3300025949 Bacteria 4953
148 Ga0207667_10054763 3300025949 Bacteria 4195
149 Ga0207651_10080954 3300025960 Bacteria 2339
150 Ga0207640_10181130 3300025981 Bacteria 1580
151 Ga0207677_10073786 3300026023 Bacteria 2418
152 Ga0207639_10059058 3300026041 Bacteria 2953
153 Ga0207639_10089696 3300026041 Bacteria 2457
154 Ga0207702_10000766 3300026078 Bacteria 34146
155 Ga0207702_10052307 3300026078 Bacteria 3456
156 Ga0207702_10095084 3300026078 Bacteria 2617
157 Ga0207648_10007790 3300026089 Bacteria 10456
158 Ga0207683_10011045 3300026121 Bacteria 7696
159 Ga0207698_10001776 3300026142 Bacteria 12585
160 Ga0268266_10000137 3300028379 Bacteria 140685
161 Ga0307517_10022152 3300028786 Bacteria 7976
162 Ga0307515_10000144 3300028794 Bacteria 170910
163 Ga0307515_10214606 3300028794 Bacteria 1759
164 Ga0265338_10174586 3300028800 Bacteria 1644
165 Ga0307507_10001752 3300033179 Bacteria 47797
166 Ga0307510_10020524 3300033180 Bacteria 7720
167 Ga0395899_0000002 3300037312 Bacteria 1324310
168 Ga0395899_0000332 3300037312 Bacteria 59463
169 Ga0395900_0000014 3300037418 Bacteria 386513
170 Ga0395900_0000357 3300037418 Bacteria 66369
171 Ga0395900_0009745 3300037418 Bacteria 9839
172 Ga0395898_0021811 3300037466 Bacteria 6489
173 Ga0395898_0082847 3300037466 Bacteria 3092
174 Ga0395905_0000241 3300037471 Bacteria 82847
175 Ga0395901_0002477 3300038443 Bacteria 18737
176 Ga0395901_0023507 3300038443 Bacteria 6321
177 Ga0395901_0311193 3300038443 Bacteria 1631
178 Ga0439448_0010210 3300042005 Bacteria 2779
179 Ga0466959_0101149 3300045049 Bacteria 2063
180 Ga0466959_0140502 3300045049 Bacteria 1707
181 Ga0495651_0055457 3300046462 Bacteria 3045
182 Ga0495651_0156691 3300046462 Bacteria 1636
183 Ga0495585_0000777 3300046492 Bacteria 28217
184 Ga0495585_0001548 3300046492 Bacteria 17836
185 Ga0495606_0000116 3300046507 Bacteria 134901
186 Ga0495606_0032042 3300046507 Bacteria 3646
187 Ga0495606_0034666 3300046507 Bacteria 3462
188 Ga0495610_0001033 3300046512 Bacteria 25561
189 Ga0495610_0004261 3300046512 Bacteria 10650
190 Ga0495616_0003195 3300046513 Bacteria 10569
191 Ga0495616_0006777 3300046513 Bacteria 6905
192 Ga0495631_0032807 3300046518 Bacteria 2339
193 Ga0495631_0108104 3300046518 Bacteria 1196
194 Ga0495644_0026998 3300046523 Bacteria 2177
195 Ga0495648_0032143 3300046524 Bacteria 3447
196 Ga0495648_0033647 3300046524 Bacteria 3345
197 Ga0495633_0000023 3300046558 Bacteria 226510
198 Ga0495633_0019262 3300046558 Bacteria 3452
199 Ga0495668_0000012 3300046616 Bacteria 458817
200 Ga0495668_0000108 3300046616 Bacteria 132593
201 Ga0495668_0044582 3300046616 Bacteria 2465
202 Ga0495625_0000159 3300046660 Bacteria 104355
203 Ga0495625_0000939 3300046660 Bacteria 39095
204 Ga0495625_0003259 3300046660 Bacteria 16404
205 Ga0495625_0177965 3300046660 Bacteria 1416
206 Ga0495661_0000511 3300046665 Bacteria 40405
207 Ga0495661_0009715 3300046665 Bacteria 6590
208 Ga0495671_0180583 3300046692 Bacteria 1025
209 Ga0495649_0000003 3300046694 Bacteria 880817
210 Ga0495660_0016266 3300046810 Bacteria 4289
211 Ga0495687_000736 3300047443 Bacteria 35743
212 Ga0495677_0039111 3300047445 Bacteria 1734
213 Ga0495673_0075001 3300047469 Bacteria 1414
214 Ga0495686_0000097 3300047472 Bacteria 183450
215 Ga0495686_0066380 3300047472 Bacteria 2229
216 Ga0495686_0182354 3300047472 Bacteria 1215
217 Ga0495614_0002927 3300048089 Bacteria 7599
218 Ga0495682_0020045 3300049460 Bacteria 2512
219 Ga0501034_0559453 3300049571 Bacteria 1052
220 Ga0501036_0221005 3300049572 Bacteria 1591
221 nmdc:mga0k408_593_c2 3300050493 Bacteria 11188
222 Ga0500618_000002 3300053125 Bacteria 370822
223 Ga0500642_0023004 3300053130 Bacteria 2496
224 Ga0500627_0046809 3300053158 Bacteria 1875
225 2599478613 2599185184 Bacteria 6430550
226 2852624157 2852623160 Bacteria 4376875
227 2884936923 2884933994 Bacteria 4535041
228 2914763032 2914759650 Bacteria 4701441
229 2928080329 2928078545 Bacteria 6534839
230 2928149496 2928147474 Bacteria 6512076
231 2932083326 2932082852 Bacteria 6563563
232 2977236782 2977232053 Bacteria 5485925
233 Ga0495668_0155373
234 JGI24736J21556_1001166
235 JGI24740J21852_10026476
236 JGI24740J21852_10066882
237 JGI24737J22298_10002444
238 JGI25162J39368_1000022
239 JGI25162J39368_1004019
240 JGI25157J39369_1006377
241 JGI25164J39214_1002200
242 JGI25165J46597_1001355
243 rootH1_10091478
244 rootH2_10016199
245 rootH2_10098625
246 rootH2_10280781
247 rootL2_10035189
248 rootL2_10172720
249 rootH1_10059671
250 rootH1_10090045
251 rootH1_10165442
252 Ga0065714_10090626
253 Ga0070658_10000091
254 Ga0070658_10051517
255 Ga0070658_10178328
256 Ga0070676_10000081
257 Ga0070683_100038346
258 Ga0070680_100160295
259 Ga0068868_100074928
260 Ga0070660_100046015
261 Ga0070673_100105058
262 Ga0070659_100002833
263 Ga0070662_100000011
264 Ga0070662_100344392
265 Ga0070681_10013859
266 Ga0068867_100003978
267 Ga0070679_100057842
268 Ga0070684_100069204
269 Ga0068853_100036053
270 Ga0068853_100156831
271 Ga0070665_100000003
272 Ga0068855_100001132
273 Ga0068855_100001166
274 Ga0068855_100014194
275 Ga0068855_100018636
276 Ga0068855_100067360
277 Ga0068854_100011674
278 Ga0068856_100000015
279 Ga0068856_100008017
280 Ga0068856_100069445
281 Ga0068856_100186488
282 Ga0068852_100000527
283 Ga0068851_10129581
284 Ga0075366_10017422
285 Ga0097621_100000150
286 Ga0075370_10065458
287 Ga0068871_100000045
288 Ga0068865_100000170
289 Ga0105240_10000200
290 Ga0105240_10016113
291 Ga0105240_10018761
292 Ga0105240_10174749
293 Ga0105240_10198238
294 Ga0105240_10872342
295 Ga0105241_10000268
296 Ga0105241_10001680
297 Ga0105241_10058239
298 Ga0105241_10247744
299 Ga0105242_10024575
300 Ga0105237_10000239
301 Ga0105237_10000513
302 Ga0105237_10002150
303 Ga0105237_10012720
304 Ga0105237_10013380
305 Ga0105237_10233308
306 Ga0105237_10301917
307 Ga0105237_10365392
308 Ga0105238_10006131
309 Ga0105239_10000006
310 Ga0105239_10000094
311 Ga0105239_10001108
312 Ga0105239_10001646
313 Ga0105239_10001742
314 Ga0105239_10037098
315 Ga0105239_10296103
316 Ga0105246_10287845
317 Ga0157373_10000181
318 Ga0157373_10001187
319 Ga0157373_10051501
320 Ga0157371_10000141
321 Ga0157371_10002498
322 Ga0157371_10017160
323 Ga0157371_10070395
324 Ga0157369_10000295
325 Ga0157369_10156034
326 Ga0157374_10000277
327 Ga0157374_10009397
328 Ga0157374_10424551
329 Ga0157374_10513433
330 Ga0157378_10047691
331 Ga0157378_10111753
332 Ga0163162_10000024
333 Ga0163162_10003927
334 Ga0163162_10174637
335 Ga0157372_10000015
336 Ga0157372_10000700
337 Ga0157372_10022859
338 Ga0157372_10040601
339 Ga0157375_10065963
340 Ga0157377_10047944
341 Ga0157376_10028787
342 Ga0163161_10024430
343 Ga0207427_100090
344 Ga0209437_100024
345 Ga0209437_100034
346 Ga0209026_1005845
347 Ga0209026_1006911
348 Ga0209129_1010877
349 Ga0209233_1000038
350 Ga0209233_1004109
351 Ga0207647_10000051
352 Ga0207647_10000405
353 Ga0207645_10000156
354 Ga0207643_10117603
355 Ga0207705_10000132
356 Ga0207654_10001755
357 Ga0207654_10099358
358 Ga0207707_10113279
359 Ga0207695_10000055
360 Ga0207695_10005639
361 Ga0207695_10006282
362 Ga0207695_10017888
363 Ga0207695_10387637
364 Ga0207671_10001276
365 Ga0207671_10001394
366 Ga0207671_10003182
367 Ga0207671_10006478
368 Ga0207671_10191162
369 Ga0207660_10017928
370 Ga0207657_10052771
371 Ga0207652_10012434
372 Ga0207644_10021559
373 Ga0207706_10000122
374 Ga0207669_10122746
375 Ga0207704_10000041
376 Ga0207661_10044822
377 Ga0207667_10000023
378 Ga0207667_10000993
379 Ga0207667_10040635
380 Ga0207667_10054763
381 Ga0207651_10080954
382 Ga0207640_10181130
383 Ga0207677_10073786
384 Ga0207639_10059058
385 Ga0207639_10089696
386 Ga0207702_10000766
387 Ga0207702_10052307
388 Ga0207702_10095084
389 Ga0207648_10007790
390 Ga0207683_10011045
391 Ga0207698_10001776
392 Ga0268266_10000137
393 Ga0307517_10022152
394 Ga0307515_10000144
395 Ga0307515_10214606
396 Ga0265338_10174586
397 Ga0307507_10001752
398 Ga0307510_10020524
399 Ga0395899_0000002
400 Ga0395899_0000332
401 Ga0395900_0000014
402 Ga0395900_0000357
403 Ga0395900_0009745
404 Ga0395898_0021811
405 Ga0395898_0082847
406 Ga0395905_0000241
407 Ga0395901_0002477
408 Ga0395901_0023507
409 Ga0395901_0311193
410 Ga0439448_0010210
411 Ga0466959_0101149
412 Ga0466959_0140502
413 Ga0495651_0055457
414 Ga0495651_0156691
415 Ga0495585_0000777
416 Ga0495585_0001548
417 Ga0495606_0000116
418 Ga0495606_0032042
419 Ga0495606_0034666
420 Ga0495610_0001033
421 Ga0495610_0004261
422 Ga0495616_0003195
423 Ga0495616_0006777
424 Ga0495631_0032807
425 Ga0495631_0108104
426 Ga0495644_0026998
427 Ga0495648_0032143
428 Ga0495648_0033647
429 Ga0495633_0000023
430 Ga0495633_0019262
431 Ga0495668_0000012
432 Ga0495668_0000108
433 Ga0495668_0044582
434 Ga0495625_0000159
435 Ga0495625_0000939
436 Ga0495625_0003259
437 Ga0495625_0177965
438 Ga0495661_0000511
439 Ga0495661_0009715
440 Ga0495671_0180583
441 Ga0495649_0000003
442 Ga0495660_0016266
443 Ga0495687_000736
444 Ga0495677_0039111
445 Ga0495673_0075001
446 Ga0495686_0000097
447 Ga0495686_0066380
448 Ga0495686_0182354
449 Ga0495614_0002927
450 Ga0495682_0020045
451 Ga0501034_0559453
452 Ga0501036_0221005
453 nmdc:mga0k408_593_c2
454 Ga0500618_000002
455 Ga0500642_0023004
456 Ga0500627_0046809
457 2599478613
458 2852624157
459 2884936923
460 2914763032
461 2928080329
462 2928149496
463 2932083326
464 2977236782

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04187

Cofac_haem_bdg

Haem-binding uptake, Tiki superfamily, ChaN

74

278

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g5g-assembly1.cif.gz_X-2 cofacial heme binding to chan of campylobacter jejuni 0.7734 26 287
2g5g-assembly1.cif.gz_X-2 cofacial heme binding to chan of campylobacter jejuni 0.7515 26 287
2ebh-assembly1.cif.gz_X crystal structures reveal a thiol-protease like catalytic triad in the c-terminal region of pasteurella multocida toxin 0.6784 39 257
2ebf-assembly1.cif.gz_X crystal structures reveal a thiol-protease like catalytic triad in the c-terminal region of pasteurella multocida toxin 0.6726 31 267
6a7h-assembly4.cif.gz_D bacterial protein toxins 0.6237 37 259
ID Description Score Start End Superfamily
af_A0A1D6FSB0_130_265_3.40.50.11550 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8077 41 167 3.40.50.11550
2g5gX01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7665 26 287 3.40.50.11550
af_A0A1D6FSB0_130_265_3.40.50.11550 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7549 41 167 3.40.50.11550
af_I1MYY6_150_314_3.40.50.11550 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7445 41 189 3.40.50.11550
2g5gX01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7381 26 287 3.40.50.11550
ID Description Score Start End GO Terms
AF-A0A4R2ZHP0-F1-model_v4 deleted 0.9742 26 290
AF-A0A519Z386-F1-model_v4 Haem-binding uptake Tiki superfamily ChaN domain-containing protein 0.974 37 290
AF-A0A3C1BEL7-F1-model_v4 Haem-binding uptake Tiki superfamily ChaN domain-containing protein 0.9732 81 290
AF-A0A2A5B779-F1-model_v4 Haem-binding uptake Tiki superfamily ChaN domain-containing protein 0.9626 20 288
AF-A0A7Y4WXX5-F1-model_v4 ChaN family lipoprotein 0.9606 40 289

Map