F345514

General Info

Members Datasets Scaffolds Average Seq Length
232 142 216 472

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0067303|Ga0501070_0067303_867_2342
Length 491
Sequence MMKRFLRSEASMSTTRRIRIQPDGDTTIATGLAAIRSEMKLLTAFPQDVEATAELAAANPRLPDLDRSDIPFVTIDPAGSMDLDQAMYVERADGGYRVYYAIADVAAFVAPGDAVDIEAHKRGETLYGADSRIPLHPKVLSEGAASLLQDQLRPALLWSIDLDETGEGIKVDVRRARVKSRARLDYGSVQAAIDKGGADPMWTVLREIGELRMKREAARGGISLPLPEQEVAVDADGKWTLAFRARHPLEDWNEQISLLTGMAAAHLMVEHKVGILRTLPEPEAWAIQRLHRTARALGIAWPDGLDYPAFIRSLDPTQPVHIAMMVASTTVLRGAGYVTFNGSVPANAEQSALASTYAHATAPLRRLVDRYSGEICVALCAGAPVPQWVLDGLPQLPEIMQQSGLRASRYEHAVLDLAEAAALASRIGETFPGSIVELDHEDPKQGTVIIRDPAIEARIGANAPLPLGADVTARLVEADPAKRVTRFELAS

Samples

Sample ID Description Type Environment
1 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
2 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
3 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
4 2643221604 Nocardioides sp. Root190 Isolate Unclassified
5 2643221617 Nocardioides sp. Root79 Isolate Unclassified
6 2643221620 Nocardioides sp. Root240 Isolate Unclassified
7 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
8 2643221696 Nocardioides sp. Root140 Isolate Unclassified
9 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
10 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
11 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
12 2919395869 Microbacterium resistens 2980 Isolate Unclassified
13 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
14 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
15 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
16 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
17 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
18 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
22 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
31 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
32 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
97 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
98 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
105 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
106 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
130 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
141 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.95
Metatranscriptomes 2.16
Isolates 6.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.03
Nodule 0
Rhizoplane 4.74
Rhizosphere 84.05
Stem 0
Stem Tuber 0
Unclassified 5.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1003189 3300001904 Bacteria 2858
2 JGI24740J21852_10003272 3300001979 Bacteria 7144
3 JGI25162J39368_1000547 3300002737 Bacteria 27800
4 JGI25162J39368_1001617 3300002737 Bacteria 11289
5 JGI25164J39214_1000525 3300002772 Bacteria 18067
6 JGI25164J39214_1001157 3300002772 Bacteria 7353
7 JGI25165J46597_1000662 3300003214 Bacteria 27802
8 JGI25165J46597_1003046 3300003214 Bacteria 4570
9 Ga0070683_100001385 3300005329 Bacteria 18616
10 Ga0070683_100018769 3300005329 Bacteria 6131
11 Ga0070683_100048676 3300005329 Bacteria 3919
12 Ga0070683_100072659 3300005329 Bacteria 3211
13 Ga0070680_100026294 3300005336 Bacteria 4654
14 Ga0070682_100000848 3300005337 Bacteria 17883
15 Ga0070682_100030978 3300005337 Bacteria 3232
16 Ga0070660_100030014 3300005339 Bacteria 4077
17 Ga0070660_100050342 3300005339 Bacteria 3205
18 Ga0070691_10009642 3300005341 Bacteria 4406
19 Ga0070661_100024753 3300005344 Bacteria 4307
20 Ga0070661_100031378 3300005344 Bacteria 3843
21 Ga0070661_100032277 3300005344 Bacteria 3790
22 Ga0070692_10001833 3300005345 Bacteria 7968
23 Ga0070692_10006840 3300005345 Bacteria 4980
24 Ga0070659_100006062 3300005366 Bacteria 8721
25 Ga0070659_100029214 3300005366 Bacteria 4260
26 Ga0070714_100000244 3300005435 Bacteria 42515
27 Ga0070714_100002987 3300005435 Bacteria 12531
28 Ga0070714_100025038 3300005435 Bacteria 4921
29 Ga0070713_100001046 3300005436 Bacteria 17685
30 Ga0070694_100063860 3300005444 Bacteria 2519
31 Ga0070663_100020255 3300005455 Bacteria 4401
32 Ga0070663_100160442 3300005455 Bacteria 1730
33 Ga0070681_10013465 3300005458 Bacteria 8127
34 Ga0070681_10014233 3300005458 Bacteria 7917
35 Ga0070681_10084871 3300005458 Bacteria 3119
36 Ga0070679_100137910 3300005530 Bacteria 2420
37 Ga0070684_100000270 3300005535 Bacteria 35927
38 Ga0070684_100075680 3300005535 Bacteria 2970
39 Ga0068853_100013278 3300005539 Bacteria 6725
40 Ga0068853_100018931 3300005539 Bacteria 5702
41 Ga0068853_100051515 3300005539 Bacteria 3543
42 Ga0070696_100001129 3300005546 Bacteria 17274
43 Ga0070696_100050409 3300005546 Bacteria 2894
44 Ga0070696_100098803 3300005546 Bacteria 2088
45 Ga0070693_100040181 3300005547 Bacteria 2625
46 Ga0068855_100166512 3300005563 Bacteria 2498
47 Ga0070664_100038197 3300005564 Bacteria 4041
48 Ga0068857_100012948 3300005577 Bacteria 7268
49 Ga0068857_100013298 3300005577 Bacteria 7169
50 Ga0068854_100002545 3300005578 Bacteria 11291
51 Ga0068854_100007196 3300005578 Bacteria 7107
52 Ga0068854_100100440 3300005578 Bacteria 2168
53 Ga0068856_100018618 3300005614 Bacteria 6730
54 Ga0068852_100043620 3300005616 Bacteria 3805
55 Ga0068852_100059009 3300005616 Bacteria 3326
56 Ga0070712_100089472 3300006175 Bacteria 2252
57 Ga0105245_10181924 3300009098 Bacteria 2009
58 Ga0105245_10296618 3300009098 Bacteria 1585
59 Ga0114129_10001855 3300009147 Bacteria 28806
60 Ga0105237_10297259 3300009545 Bacteria 1617
61 Ga0105238_10012787 3300009551 Bacteria 8470
62 Ga0105238_10026129 3300009551 Bacteria 5949
63 Ga0105246_10062292 3300011119 Bacteria 2598
64 Ga0157373_10017539 3300013100 Bacteria 5214
65 Ga0157373_10045589 3300013100 Bacteria 3129
66 Ga0157373_10082113 3300013100 Bacteria 2272
67 Ga0157371_10006947 3300013102 Bacteria 9224
68 Ga0157371_10024807 3300013102 Bacteria 4376
69 Ga0157371_10028126 3300013102 Bacteria 4073
70 Ga0157371_10122922 3300013102 Bacteria 1846
71 Ga0157370_10009918 3300013104 Bacteria 10089
72 Ga0157370_10013253 3300013104 Bacteria 8496
73 Ga0157370_10025955 3300013104 Bacteria 5792
74 Ga0157370_10108605 3300013104 Bacteria 2594
75 Ga0157370_10165567 3300013104 Bacteria 2056
76 Ga0157369_10003457 3300013105 Bacteria 18730
77 Ga0157372_10013088 3300013307 Bacteria 8852
78 Ga0157372_10018322 3300013307 Bacteria 7525
79 Ga0157372_10019134 3300013307 Bacteria 7372
80 Ga0157372_10154514 3300013307 Bacteria 2650
81 Ga0182008_10006809 3300014497 Bacteria 6358
82 Ga0182008_10011242 3300014497 Bacteria 4769
83 Ga0182007_10007620 3300015262 Bacteria 4516
84 Ga0182007_10011687 3300015262 Bacteria 3410
85 Ga0206356_10490854 3300020070 Bacteria 7785
86 Ga0206354_10884761 3300020081 Bacteria 8816
87 Ga0206353_10931654 3300020082 Bacteria 1506
88 Ga0206353_11386851 3300020082 Bacteria 2688
89 Ga0154015_1321256 3300020610 Bacteria 3282
90 Ga0207427_100147 3300025231 Bacteria 80584
91 Ga0207427_100205 3300025231 Bacteria 53817
92 Ga0209437_100005 3300025233 Bacteria 1071596
93 Ga0209437_100349 3300025233 Bacteria 53817
94 Ga0209026_1000090 3300025250 Bacteria 172829
95 Ga0209233_1000011 3300025261 Bacteria 1071611
96 Ga0209233_1000315 3300025261 Bacteria 53817
97 Ga0207647_10004221 3300025904 Bacteria 10652
98 Ga0207705_10002294 3300025909 Bacteria 14804
99 Ga0207705_10008105 3300025909 Bacteria 7696
100 Ga0207654_10093623 3300025911 Bacteria 1837
101 Ga0207707_10004513 3300025912 Bacteria 12237
102 Ga0207707_10009280 3300025912 Bacteria 8531
103 Ga0207707_10016289 3300025912 Bacteria 6485
104 Ga0207695_10004009 3300025913 Bacteria 20281
105 Ga0207695_10089177 3300025913 Bacteria 3102
106 Ga0207671_10122800 3300025914 Bacteria 1986
107 Ga0207660_10008532 3300025917 Bacteria 6628
108 Ga0207657_10013934 3300025919 Bacteria 7866
109 Ga0207657_10046215 3300025919 Bacteria 3815
110 Ga0207657_10142312 3300025919 Bacteria 1959
111 Ga0207649_10002874 3300025920 Bacteria 9475
112 Ga0207649_10018434 3300025920 Bacteria 3970
113 Ga0207652_10017063 3300025921 Bacteria 5939
114 Ga0207694_10011661 3300025924 Bacteria 6630
115 Ga0207700_10008862 3300025928 Bacteria 6255
116 Ga0207664_10000132 3300025929 Bacteria 64236
117 Ga0207644_10014024 3300025931 Bacteria 5356
118 Ga0207690_10001519 3300025932 Bacteria 14518
119 Ga0207690_10002568 3300025932 Bacteria 10968
120 Ga0207690_10011391 3300025932 Bacteria 5319
121 Ga0207690_10029355 3300025932 Bacteria 3495
122 Ga0207690_10095184 3300025932 Bacteria 2115
123 Ga0207706_10011698 3300025933 Bacteria 8002
124 Ga0207709_10062290 3300025935 Bacteria 2334
125 Ga0207691_10055177 3300025940 Bacteria 3622
126 Ga0207661_10006608 3300025944 Bacteria 8196
127 Ga0207661_10013317 3300025944 Bacteria 6006
128 Ga0207667_10001852 3300025949 Bacteria 26559
129 Ga0207667_10001877 3300025949 Bacteria 26426
130 Ga0207667_10027404 3300025949 Bacteria 6202
131 Ga0207651_10075973 3300025960 Bacteria 2400
132 Ga0207640_10004286 3300025981 Bacteria 7721
133 Ga0207640_10008569 3300025981 Bacteria 5679
134 Ga0207640_10037989 3300025981 Bacteria 3034
135 Ga0207639_10001642 3300026041 Bacteria 15068
136 Ga0207639_10112551 3300026041 Bacteria 2221
137 Ga0207639_10113722 3300026041 Bacteria 2211
138 Ga0207678_10011232 3300026067 Bacteria 7865
139 Ga0207678_10030609 3300026067 Bacteria 4698
140 Ga0207708_10118269 3300026075 Bacteria 2063
141 Ga0207702_10026423 3300026078 Bacteria 4820
142 Ga0207674_10019405 3300026116 Bacteria 7364
143 Ga0207674_10034678 3300026116 Bacteria 5272
144 Ga0207698_10002364 3300026142 Bacteria 11187
145 Ga0207698_10006131 3300026142 Bacteria 7483
146 Ga0209971_1012103 3300027682 Bacteria 2042
147 Ga0307405_10051087 3300031731 Bacteria 2564
148 Ga0307405_10095232 3300031731 Bacteria 1982
149 Ga0307410_10023758 3300031852 Bacteria 3818
150 Ga0307410_10178739 3300031852 Bacteria 1605
151 Ga0307407_10105576 3300031903 Bacteria 1757
152 Ga0307414_10003438 3300032004 Bacteria 8448
153 Ga0307414_10007807 3300032004 Bacteria 6034
154 Ga0307414_10087391 3300032004 Bacteria 2303
155 Ga0307414_10097257 3300032004 Bacteria 2205
156 Ga0307415_100000673 3300032126 Bacteria 15146
157 Ga0307415_100010055 3300032126 Bacteria 5340
158 Ga0307415_100120632 3300032126 Bacteria 1965
159 Ga0395898_0292182 3300037466 Bacteria 1555
160 Ga0395905_0001158 3300037471 Bacteria 32992
161 Ga0395901_0002225 3300038443 Bacteria 19803
162 Ga0395901_0006839 3300038443 Bacteria 11518
163 Ga0439446_0021581 3300042156 Bacteria 1821
164 Ga0466963_0126562 3300044694 Bacteria 1762
165 Ga0466970_0000558 3300044765 Bacteria 18194
166 Ga0466957_0046753 3300044842 Bacteria 2629
167 Ga0466960_0047281 3300044901 Bacteria 2063
168 Ga0466958_0097589 3300045836 Bacteria 1824
169 Ga0466967_0103443 3300045976 Bacteria 2606
170 Ga0496103_0040640 3300048906 Bacteria 2857
171 Ga0496106_0017586 3300048909 Bacteria 5288
172 Ga0496107_0056452 3300048910 Bacteria 2837
173 Ga0496109_0017099 3300048912 Bacteria 6348
174 Ga0496109_0193037 3300048912 Bacteria 1913
175 Ga0496110_0064950 3300048913 Bacteria 3226
176 Ga0496110_0084530 3300048913 Bacteria 2832
177 Ga0496110_0110869 3300048913 Bacteria 2466
178 Ga0496111_0037881 3300048914 Bacteria 3452
179 Ga0496111_0183335 3300048914 Bacteria 1556
180 Ga0496112_0025214 3300048915 Bacteria 5707
181 Ga0501031_0012646 3300049568 Bacteria 5511
182 Ga0501031_0046605 3300049568 Bacteria 2827
183 Ga0501032_0007326 3300049569 Bacteria 8065
184 Ga0501034_0057192 3300049571 Bacteria 3921
185 Ga0501034_0063322 3300049571 Bacteria 3712
186 Ga0501036_0139582 3300049572 Bacteria 2046
187 Ga0501037_0004971 3300049573 Bacteria 9668
188 Ga0501040_0007981 3300049576 Bacteria 6870
189 Ga0501041_0010281 3300049577 Bacteria 5513
190 Ga0501042_0002616 3300049578 Bacteria 11072
191 Ga0501047_0060757 3300049581 Bacteria 3646
192 Ga0501047_0098059 3300049581 Bacteria 2809
193 Ga0501048_0010674 3300049582 Bacteria 6852
194 Ga0501067_0028763 3300049583 Bacteria 3080
195 Ga0501067_0035582 3300049583 Bacteria 2765
196 Ga0501068_0022123 3300049584 Bacteria 3716
197 Ga0501069_0021190 3300049585 Bacteria 3526
198 Ga0501069_0077728 3300049585 Bacteria 1866
199 Ga0501070_0005002 3300049586 Bacteria 11312
200 Ga0501070_0045748 3300049586 Bacteria 3639
201 Ga0501070_0067303 3300049586 Bacteria 2966
202 Ga0501070_0067431 3300049586 Bacteria 2963
203 Ga0501070_0101062 3300049586 Bacteria 2385
204 Ga0501074_0016398 3300049590 Bacteria 5380
205 Ga0501074_0090819 3300049590 Bacteria 2187
206 Ga0501076_0005941 3300049592 Bacteria 8814
207 Ga0501079_0153994 3300049741 Bacteria 1792
208 Ga0501080_0000847 3300049742 Bacteria 25007
209 Ga0501081_0165476 3300049743 Bacteria 1595
210 Ga0501035_0014195 3300049822 Bacteria 7351
211 Ga0501044_0039517 3300049823 Bacteria 4922
212 Ga0501044_0061996 3300049823 Bacteria 3824
213 nmdc:mga05p37_284_c1 3300050507 Bacteria 52993
214 Ga0500573_0018837 3300053140 Bacteria 3942
215 Ga0500661_010610 3300055283 Bacteria 1676
216 Ga0530510_0045847 3300061734 Bacteria 3158

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300011119 Ga0105246_10062292 Ga0105246_100622921 399
2 3300045836 Ga0466958_0097589 Ga0466958_0097589_245_1663 434
3 3300044765 Ga0466970_0000558 Ga0466970_0000558_14662_16080 436
4 3300044842 Ga0466957_0046753 Ga0466957_0046753_511_1929 436
5 3300049741 Ga0501079_0153994 Ga0501079_0153994_400_1755 438
6 3300048906 Ga0496103_0040640 Ga0496103_0040640_648_2033 440
7 3300048909 Ga0496106_0017586 Ga0496106_0017586_898_2283 440
8 3300048910 Ga0496107_0056452 Ga0496107_0056452_1100_2485 440
9 3300048912 Ga0496109_0193037 Ga0496109_0193037_161_1546 440
10 3300048913 Ga0496110_0084530 Ga0496110_0084530_441_1826 440
11 3300048914 Ga0496111_0037881 Ga0496111_0037881_1671_3056 440
12 3300049583 Ga0501067_0035582 Ga0501067_0035582_1249_2634 440
13 3300049585 Ga0501069_0077728 Ga0501069_0077728_346_1731 440
14 3300009098 Ga0105245_10181924 Ga0105245_101819241 444
15 3300048913 Ga0496110_0064950 Ga0496110_0064950_1671_3077 447
16 3300048914 Ga0496111_0183335 Ga0496111_0183335_14_1420 447
17 3300049568 Ga0501031_0012646 Ga0501031_0012646_457_1857 448
18 3300049576 Ga0501040_0007981 Ga0501040_0007981_1949_3349 448
19 3300049578 Ga0501042_0002616 Ga0501042_0002616_8936_10336 448
20 3300049743 Ga0501081_0165476 Ga0501081_0165476_159_1559 448
21 3300061734 Ga0530510_0045847 Ga0530510_0045847_1030_2430 448
22 3300009098 Ga0105245_10296618 Ga0105245_102966182 449
23 3300049583 Ga0501067_0028763 Ga0501067_0028763_1092_2504 449
24 3300049584 Ga0501068_0022123 Ga0501068_0022123_983_2395 449
25 3300005329 Ga0070683_100072659 Ga0070683_1000726591 452
26 3300005535 Ga0070684_100000270 Ga0070684_10000027033 452
27 3300005564 Ga0070664_100038197 Ga0070664_1000381975 452
28 3300005577 Ga0068857_100012948 Ga0068857_1000129482 452
29 3300025944 Ga0207661_10006608 Ga0207661_100066084 452
30 3300026116 Ga0207674_10034678 Ga0207674_100346782 452
31 3300044901 Ga0466960_0047281 Ga0466960_0047281_76_1500 452
32 3300005341 Ga0070691_10009642 Ga0070691_100096423 453
33 3300005344 Ga0070661_100024753 Ga0070661_1000247533 453
34 3300005345 Ga0070692_10001833 Ga0070692_100018333 453
35 3300005455 Ga0070663_100020255 Ga0070663_1000202552 453
36 3300005539 Ga0068853_100051515 Ga0068853_1000515153 453
37 3300005578 Ga0068854_100002545 Ga0068854_1000025458 453
38 3300005616 Ga0068852_100043620 Ga0068852_1000436203 453
39 3300013102 Ga0157371_10024807 Ga0157371_100248073 453
40 3300013104 Ga0157370_10108605 Ga0157370_101086052 453
41 3300013105 Ga0157369_10003457 Ga0157369_1000345717 453
42 3300013307 Ga0157372_10013088 Ga0157372_100130883 453
43 3300025909 Ga0207705_10002294 Ga0207705_100022943 453
44 3300025913 Ga0207695_10004009 Ga0207695_1000400912 453
45 3300025919 Ga0207657_10013934 Ga0207657_100139345 453
46 3300025920 Ga0207649_10002874 Ga0207649_100028743 453
47 3300025932 Ga0207690_10029355 Ga0207690_100293552 453
48 3300025949 Ga0207667_10001877 Ga0207667_100018775 453
49 3300025981 Ga0207640_10004286 Ga0207640_100042864 453
50 3300026041 Ga0207639_10001642 Ga0207639_100016426 453
51 3300026067 Ga0207678_10011232 Ga0207678_100112323 453
52 3300026142 Ga0207698_10002364 Ga0207698_100023643 453
53 3300005337 Ga0070682_100030978 Ga0070682_1000309782 454
54 3300049577 Ga0501041_0010281 Ga0501041_0010281_2188_3588 456
55 3300049582 Ga0501048_0010674 Ga0501048_0010674_4063_5463 456
56 3300049592 Ga0501076_0005941 Ga0501076_0005941_5262_6662 456
57 3300049572 Ga0501036_0139582 Ga0501036_0139582_25_1437 457
58 3300032004 Ga0307414_10087391 Ga0307414_100873912 459
59 3300009147 Ga0114129_10001855 Ga0114129_1000185512 460
60 3300025960 Ga0207651_10075973 Ga0207651_100759732 460
61 3300050507 nmdc:mga05p37_284_c1 nmdc:mga05p37_284_c1_15147_16532 460
62 3300032004 Ga0307414_10003438 Ga0307414_100034384 464
63 3300032004 Ga0307414_10007807 Ga0307414_100078075 464
64 3300013104 Ga0157370_10009918 Ga0157370_100099187 465
65 3300049581 Ga0501047_0098059 Ga0501047_0098059_933_2369 465
66 3300049586 Ga0501070_0005002 Ga0501070_0005002_5293_6729 465
67 3300049586 Ga0501070_0067431 Ga0501070_0067431_1038_2528 465
68 3300049590 Ga0501074_0016398 Ga0501074_0016398_3207_4643 465
69 3300049742 Ga0501080_0000847 Ga0501080_0000847_4451_5887 465
70 3300049822 Ga0501035_0014195 Ga0501035_0014195_2954_4390 465
71 3300049823 Ga0501044_0039517 Ga0501044_0039517_1054_2490 465
72 iso_pu_bacteria 2919395869 2919399102 465
73 iso_pu_bacteria 2946041624 2946043764 465
74 3300005329 Ga0070683_100018769 Ga0070683_1000187693 466
75 3300049590 Ga0501074_0090819 Ga0501074_0090819_698_2167 466
76 iso_pu_bacteria 2852646457 2852646977 466
77 iso_pu_bacteria 2945968032 2945971431 466
78 iso_pu_bacteria 2946033335 2946034165 466
79 3300025940 Ga0207691_10055177 Ga0207691_100551773 467
80 3300032126 Ga0307415_100120632 Ga0307415_1001206322 467
81 3300049571 Ga0501034_0057192 Ga0501034_0057192_1447_2886 467
82 3300049573 Ga0501037_0004971 Ga0501037_0004971_844_2283 467
83 3300049823 Ga0501044_0061996 Ga0501044_0061996_570_2009 467
84 3300005535 Ga0070684_100075680 Ga0070684_1000756803 468
85 3300005578 Ga0068854_100007196 Ga0068854_1000071966 468
86 3300025924 Ga0207694_10011661 Ga0207694_100116612 468
87 3300025981 Ga0207640_10008569 Ga0207640_100085695 468
88 3300005337 Ga0070682_100000848 Ga0070682_1000008487 469
89 3300005366 Ga0070659_100029214 Ga0070659_1000292142 469
90 3300005458 Ga0070681_10014233 Ga0070681_100142335 469
91 3300025912 Ga0207707_10004513 Ga0207707_100045137 469
92 3300025932 Ga0207690_10002568 Ga0207690_100025684 469
93 3300049571 Ga0501034_0063322 Ga0501034_0063322_700_2157 469
94 3300005366 Ga0070659_100006062 Ga0070659_1000060626 470
95 3300005444 Ga0070694_100063860 Ga0070694_1000638601 470
96 3300005539 Ga0068853_100013278 Ga0068853_1000132786 470
97 3300005546 Ga0070696_100098803 Ga0070696_1000988031 470
98 3300009551 Ga0105238_10012787 Ga0105238_100127875 470
99 3300013100 Ga0157373_10045589 Ga0157373_100455893 470
100 3300013102 Ga0157371_10006947 Ga0157371_100069476 470
101 3300013102 Ga0157371_10028126 Ga0157371_100281264 470
102 3300013102 Ga0157371_10122922 Ga0157371_101229222 470
103 3300013307 Ga0157372_10019134 Ga0157372_100191341 470
104 3300025911 Ga0207654_10093623 Ga0207654_100936232 470
105 3300025932 Ga0207690_10095184 Ga0207690_100951842 470
106 3300025949 Ga0207667_10001852 Ga0207667_1000185210 470
107 3300026041 Ga0207639_10112551 Ga0207639_101125512 470
108 3300031731 Ga0307405_10051087 Ga0307405_100510871 470
109 3300031731 Ga0307405_10095232 Ga0307405_100952321 470
110 3300031852 Ga0307410_10023758 Ga0307410_100237581 470
111 3300031903 Ga0307407_10105576 Ga0307407_101055762 470
112 3300032004 Ga0307414_10097257 Ga0307414_100972572 470
113 3300032126 Ga0307415_100010055 Ga0307415_1000100555 470
114 3300037466 Ga0395898_0292182 Ga0395898_0292182_65_1483 470
115 3300032126 Ga0307415_100000673 Ga0307415_10000067316 472
116 iso_pu_bacteria 2643221604 2644036257 473
117 iso_pu_bacteria 2643221617 2644101973 473
118 iso_pu_bacteria 2643221620 2644115196 473
119 iso_pu_bacteria 2643221696 2644535612 473
120 iso_pu_bacteria 2895395659 2895397379 473
121 iso_pu_bacteria 2537561836 2538831956 474
122 iso_pu_bacteria 2643221562 2643832049 474
123 iso_pu_bacteria 2643221577 2643895603 474
124 iso_pu_bacteria 2643221685 2644477785 474
125 iso_pu_bacteria 2855386786 2855390915 474
126 iso_pu_bacteria 2939611941 2939614993 474
127 3300005339 Ga0070660_100050342 Ga0070660_1000503422 475
128 3300025919 Ga0207657_10142312 Ga0207657_101423121 475
129 3300049586 Ga0501070_0045748 Ga0501070_0045748_2130_3557 475
130 3300049586 Ga0501070_0101062 Ga0501070_0101062_876_2303 475
131 3300055283 Ga0500661_010610 Ga0500661_010610_151_1578 475
132 3300005563 Ga0068855_100166512 Ga0068855_1001665122 476
133 3300005578 Ga0068854_100100440 Ga0068854_1001004402 476
134 3300005616 Ga0068852_100059009 Ga0068852_1000590092 476
135 3300020081 Ga0206354_10884761 Ga0206354_108847615 476
136 3300020082 Ga0206353_11386851 Ga0206353_113868513 476
137 3300020610 Ga0154015_1321256 Ga0154015_13212563 476
138 3300025904 Ga0207647_10004221 Ga0207647_1000422111 476
139 3300025913 Ga0207695_10089177 Ga0207695_100891773 476
140 3300025919 Ga0207657_10046215 Ga0207657_100462152 476
141 3300025920 Ga0207649_10018434 Ga0207649_100184342 476
142 3300025921 Ga0207652_10017063 Ga0207652_100170632 476
143 3300025935 Ga0207709_10062290 Ga0207709_100622902 476
144 3300025981 Ga0207640_10037989 Ga0207640_100379893 476
145 3300009551 Ga0105238_10026129 Ga0105238_100261292 477
146 3300013104 Ga0157370_10013253 Ga0157370_100132535 477
147 3300025931 Ga0207644_10014024 Ga0207644_100140243 477
148 3300042156 Ga0439446_0021581 Ga0439446_0021581_29_1474 477
149 3300044694 Ga0466963_0126562 Ga0466963_0126562_38_1477 477
150 3300045976 Ga0466967_0103443 Ga0466967_0103443_477_1916 477
151 3300048912 Ga0496109_0017099 Ga0496109_0017099_1242_2678 477
152 3300048915 Ga0496112_0025214 Ga0496112_0025214_3064_4500 477
153 3300049585 Ga0501069_0021190 Ga0501069_0021190_243_1685 477
154 3300001904 JGI24736J21556_1003189 JGI24736J21556_10031893 478
155 3300001979 JGI24740J21852_10003272 JGI24740J21852_100032727 478
156 3300002737 JGI25162J39368_1000547 JGI25162J39368_100054725 478
157 3300002737 JGI25162J39368_1001617 JGI25162J39368_10016173 478
158 3300002772 JGI25164J39214_1000525 JGI25164J39214_10005253 478
159 3300002772 JGI25164J39214_1001157 JGI25164J39214_10011576 478
160 3300003214 JGI25165J46597_1000662 JGI25165J46597_10006623 478
161 3300003214 JGI25165J46597_1003046 JGI25165J46597_10030463 478
162 3300005329 Ga0070683_100001385 Ga0070683_10000138515 478
163 3300005329 Ga0070683_100048676 Ga0070683_1000486763 478
164 3300005336 Ga0070680_100026294 Ga0070680_1000262942 478
165 3300005339 Ga0070660_100030014 Ga0070660_1000300145 478
166 3300005344 Ga0070661_100031378 Ga0070661_1000313782 478
167 3300005344 Ga0070661_100032277 Ga0070661_1000322771 478
168 3300005345 Ga0070692_10006840 Ga0070692_100068403 478
169 3300005435 Ga0070714_100000244 Ga0070714_10000024415 478
170 3300005435 Ga0070714_100002987 Ga0070714_1000029879 478
171 3300005435 Ga0070714_100025038 Ga0070714_1000250382 478
172 3300005436 Ga0070713_100001046 Ga0070713_1000010469 478
173 3300005455 Ga0070663_100160442 Ga0070663_1001604421 478
174 3300005458 Ga0070681_10013465 Ga0070681_100134657 478
175 3300005458 Ga0070681_10084871 Ga0070681_100848712 478
176 3300005530 Ga0070679_100137910 Ga0070679_1001379102 478
177 3300005539 Ga0068853_100018931 Ga0068853_1000189312 478
178 3300005546 Ga0070696_100001129 Ga0070696_1000011297 478
179 3300005546 Ga0070696_100050409 Ga0070696_1000504092 478
180 3300005547 Ga0070693_100040181 Ga0070693_1000401812 478
181 3300005577 Ga0068857_100013298 Ga0068857_1000132984 478
182 3300005614 Ga0068856_100018618 Ga0068856_1000186185 478
183 3300006175 Ga0070712_100089472 Ga0070712_1000894722 478
184 3300009545 Ga0105237_10297259 Ga0105237_102972591 478
185 3300013100 Ga0157373_10017539 Ga0157373_100175392 478
186 3300013100 Ga0157373_10082113 Ga0157373_100821132 478
187 3300013104 Ga0157370_10025955 Ga0157370_100259553 478
188 3300013104 Ga0157370_10165567 Ga0157370_101655672 478
189 3300013307 Ga0157372_10018322 Ga0157372_100183222 478
190 3300013307 Ga0157372_10154514 Ga0157372_101545143 478
191 3300014497 Ga0182008_10006809 Ga0182008_100068096 478
192 3300014497 Ga0182008_10011242 Ga0182008_100112424 478
193 3300015262 Ga0182007_10007620 Ga0182007_100076202 478
194 3300015262 Ga0182007_10011687 Ga0182007_100116873 478
195 3300020070 Ga0206356_10490854 Ga0206356_104908542 478
196 3300020082 Ga0206353_10931654 Ga0206353_109316541 478
197 3300025231 Ga0207427_100147 Ga0207427_10014746 478
198 3300025231 Ga0207427_100205 Ga0207427_10020524 478
199 3300025233 Ga0209437_100005 Ga0209437_100005776 478
200 3300025233 Ga0209437_100349 Ga0209437_10034924 478
201 3300025250 Ga0209026_1000090 Ga0209026_1000090143 478
202 3300025261 Ga0209233_1000011 Ga0209233_1000011166 478
203 3300025261 Ga0209233_1000315 Ga0209233_100031524 478
204 3300025909 Ga0207705_10008105 Ga0207705_100081053 478
205 3300025912 Ga0207707_10009280 Ga0207707_100092806 478
206 3300025912 Ga0207707_10016289 Ga0207707_100162896 478
207 3300025914 Ga0207671_10122800 Ga0207671_101228002 478
208 3300025917 Ga0207660_10008532 Ga0207660_100085323 478
209 3300025928 Ga0207700_10008862 Ga0207700_100088623 478
210 3300025929 Ga0207664_10000132 Ga0207664_1000013237 478
211 3300025932 Ga0207690_10001519 Ga0207690_100015196 478
212 3300025932 Ga0207690_10011391 Ga0207690_100113913 478
213 3300025933 Ga0207706_10011698 Ga0207706_100116986 478
214 3300025944 Ga0207661_10013317 Ga0207661_100133175 478
215 3300025949 Ga0207667_10027404 Ga0207667_100274042 478
216 3300026041 Ga0207639_10113722 Ga0207639_101137222 478
217 3300026067 Ga0207678_10030609 Ga0207678_100306092 478
218 3300026075 Ga0207708_10118269 Ga0207708_101182691 478
219 3300026078 Ga0207702_10026423 Ga0207702_100264232 478
220 3300026116 Ga0207674_10019405 Ga0207674_100194055 478
221 3300026142 Ga0207698_10006131 Ga0207698_100061315 478
222 3300027682 Ga0209971_1012103 Ga0209971_10121031 478
223 3300031852 Ga0307410_10178739 Ga0307410_101787391 478
224 3300037471 Ga0395905_0001158 Ga0395905_0001158_11283_12752 478
225 3300038443 Ga0395901_0002225 Ga0395901_0002225_11898_13397 478
226 3300038443 Ga0395901_0006839 Ga0395901_0006839_6017_7486 478
227 3300048913 Ga0496110_0110869 Ga0496110_0110869_27_1481 478
228 3300049568 Ga0501031_0046605 Ga0501031_0046605_1115_2557 478
229 3300049569 Ga0501032_0007326 Ga0501032_0007326_910_2352 478
230 3300049581 Ga0501047_0060757 Ga0501047_0060757_209_1651 478
231 3300049586 Ga0501070_0067303 Ga0501070_0067303_867_2342 478
232 3300053140 Ga0500573_0018837 Ga0500573_0018837_2232_3680 478

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18614

RNase_II_C_S1

RNase II-type exonuclease C-terminal S1 domain

429

490

0.91

PF00773

RNB

RNB domain

65

378

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c0x-assembly1.cif.gz_J structure of a 12-subunit nuclear exosome complex bound to structured rna 0.8624 20 478
2vnu-assembly1.cif.gz_D crystal structure of sc rrp44 0.8431 21 475
7aju-assembly1.cif.gz_EK cryo-em structure of the 90s-exosome super-complex (state post-a1-exosome) 0.8414 21 477
7did-assembly1.cif.gz_A mycoplasma genitalium rnase r in complex with ribose methylated single-stranded rna 0.8395 11 478
7dcy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8366 11 478
ID Description Score Start End Superfamily
af_Q8VDK1_45_315_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.7782 144 163 3.60.110.10
af_Q09316_478_542_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7521 415 478 2.40.50.140
af_Q9VCX7_866_936_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7312 415 478 2.40.50.140
af_F7EPZ4_913_995_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7298 417 478 2.40.50.140
af_K7LE88_1237_1369_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7294 143 164 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A7W0ZB21-F1-model_v4 RNB domain-containing ribonuclease 0.9687 3 414 GO:0003723
GO:0004540
GO:0006402
AF-A0A7Y5UDR2-F1-model_v4 deleted 0.9665 54 478
AF-A0A522RMJ4-F1-model_v4 RNB domain-containing ribonuclease 0.9657 1 478 GO:0000175
GO:0000932
GO:0003723
GO:0006402
AF-A0A502CGZ6-F1-model_v4 RNB domain-containing ribonuclease 0.9624 22 478 GO:0000175
GO:0000932
GO:0003723
GO:0006402
AF-A0A1C4N7X1-F1-model_v4 RNB domain-containing protein 0.9611 3 430 GO:0000175
GO:0000932
GO:0003723
GO:0006402

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pLDDT pTM Quality
89.73 0.89 High
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Predicted Structure (AlphaFold2)

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