F345577

General Info

Members Datasets Scaffolds Average Seq Length
232 167 464 316

Family's Representative Sequence

Representative Sequence 3300053096|Ga0500641_0001917|Ga0500641_0001917_5864_6919
Length 351
Sequence MIAPPAFSLGKDWSKLMAQIDPRYEKQAKAAVKEQRDVQRQVARSDKAQEGAKGEEKSFGAMQAGARAYPEPPLPPQHQPKPGIEARLDPQPMYDAPFYKGSGKLKGKVAVITGADSGIGRSVAVLFAREGADVAVLYLDEHKDAEETKKAVEKEGRRCVLIAGDVRDRDFCFDAVDQAVKALGGLDILVNNAAFQVHEKDFEALTPEHLDRTLKTNLYGYVFMAQAAVAHMKPGSAIINTGSVTGLMGSKDLLDYSMTKGGIHAFTRSLSTHLIPKGIRVNAVAPGPVWTPLNPSDKEAEDVSQFGASTPMKRPAQPEEIAPAYVFLASPQTSSYITGEIIPIIGGYGSH

Samples

Sample ID Description Type Environment
1 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
6 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
65 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
66 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
100 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
104 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
105 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
106 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
107 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
108 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
116 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
117 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
118 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
160 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
161 2547132181 Kosakonia sacchari SP1 Isolate Stem
162 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
163 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
164 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
165 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
166 2904504865 Serratia marcescens 1822 Isolate Unclassified
167 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.12
Metatranscriptomes 0
Isolates 3.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.5
Nodule 0.43
Rhizoplane 1.29
Rhizosphere 81.9
Stem 0.43
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500641_0001917 3300053096 Bacteria 7378
2 JGI25151J46595_10001095 3300003187 Bacteria 20016
3 JGI25165J46597_1000041 3300003214 Bacteria 272566
4 Ga0055532_1001464 3300003758 Bacteria 6559
5 Ga0055527_1000278 3300003760 Bacteria 30438
6 Ga0055535_1000562 3300003761 Bacteria 31517
7 Ga0055542_1000587 3300003762 Bacteria 31517
8 Ga0055529_1000418 3300003763 Bacteria 43789
9 Ga0055526_1001101 3300003771 Bacteria 19634
10 Ga0055528_1000712 3300003790 Bacteria 23580
11 Ga0070658_10036416 3300005327 Bacteria 3967
12 Ga0070690_100077063 3300005330 Bacteria 2176
13 Ga0068869_100322970 3300005334 Bacteria 1252
14 Ga0068869_100486675 3300005334 Bacteria 1028
15 Ga0070666_10046744 3300005335 Bacteria 2904
16 Ga0070680_100000803 3300005336 Bacteria 22119
17 Ga0068868_100271211 3300005338 Bacteria 1433
18 Ga0070660_100043282 3300005339 Bacteria 3441
19 Ga0070667_100057652 3300005367 Bacteria 3283
20 Ga0070709_10083014 3300005434 Bacteria 2095
21 Ga0070711_100334121 3300005439 Bacteria 1214
22 Ga0070679_100198841 3300005530 Bacteria 1971
23 Ga0070695_100097690 3300005545 Bacteria 1972
24 Ga0070696_100127644 3300005546 Bacteria 1847
25 Ga0070665_100007352 3300005548 Bacteria 11204
26 Ga0070665_100162537 3300005548 Bacteria 2235
27 Ga0070664_100030697 3300005564 Bacteria 4485
28 Ga0068857_100021805 3300005577 Bacteria 5638
29 Ga0068854_100061555 3300005578 Bacteria 2719
30 Ga0068856_100093096 3300005614 Bacteria 2999
31 Ga0068852_100076084 3300005616 Bacteria 2963
32 Ga0068859_100028436 3300005617 Bacteria 5605
33 Ga0068859_100335096 3300005617 Bacteria 1607
34 Ga0068864_100361354 3300005618 Bacteria 1372
35 Ga0068864_100460671 3300005618 Bacteria 1217
36 Ga0068863_100476596 3300005841 Bacteria 1227
37 Ga0068858_100002512 3300005842 Bacteria 18494
38 Ga0068858_100019433 3300005842 Bacteria 6354
39 Ga0068858_100023728 3300005842 Bacteria 5714
40 Ga0068860_100111182 3300005843 Bacteria 2619
41 Ga0081455_10011303 3300005937 Bacteria 8979
42 Ga0081540_1038808 3300005983 Bacteria 2504
43 Ga0097621_100004966 3300006237 Bacteria 9325
44 Ga0068871_100023663 3300006358 Bacteria 4755
45 Ga0097620_100028436 3300006931 Bacteria 5605
46 Ga0097620_100335087 3300006931 Bacteria 1607
47 Ga0105240_10008735 3300009093 Bacteria 14442
48 Ga0105240_10019370 3300009093 Bacteria 9094
49 Ga0105240_10377616 3300009093 Bacteria 1601
50 Ga0111539_10443811 3300009094 Bacteria 1511
51 Ga0105245_10028651 3300009098 Bacteria 4914
52 Ga0105245_10405934 3300009098 Bacteria 1363
53 Ga0105247_10036735 3300009101 Bacteria 2986
54 Ga0105241_10005788 3300009174 Bacteria 9124
55 Ga0105241_10021236 3300009174 Bacteria 4798
56 Ga0105241_10068073 3300009174 Bacteria 2757
57 Ga0105248_10069800 3300009177 Bacteria 3946
58 Ga0105248_10265241 3300009177 Bacteria 1933
59 Ga0105237_10025802 3300009545 Bacteria 6009
60 Ga0105237_10025933 3300009545 Bacteria 5992
61 Ga0105238_10009454 3300009551 Bacteria 9756
62 Ga0099796_10061238 3300010159 Bacteria 1334
63 Ga0105239_10001134 3300010375 Bacteria 36735
64 Ga0105239_10075470 3300010375 Bacteria 3707
65 Ga0105246_10081800 3300011119 Bacteria 2303
66 Ga0157371_10016278 3300013102 Bacteria 5554
67 Ga0157370_10118627 3300013104 Bacteria 2471
68 Ga0157378_10000515 3300013297 Bacteria 36830
69 Ga0163162_10049492 3300013306 Bacteria 4212
70 Ga0157372_10002864 3300013307 Bacteria 18647
71 Ga0157372_10061095 3300013307 Bacteria 4218
72 Ga0157375_10015040 3300013308 Bacteria 6922
73 Ga0163163_10001410 3300014325 Bacteria 20306
74 Ga0163163_10036920 3300014325 Bacteria 4750
75 Ga0157379_10003317 3300014968 Bacteria 13636
76 Ga0209672_100069 3300025228 Bacteria 174956
77 Ga0209147_100044 3300025229 Bacteria 300330
78 Ga0209437_102186 3300025233 Bacteria 3907
79 Ga0209258_100031 3300025242 Bacteria 463572
80 Ga0209148_1000027 3300025254 Bacteria 616374
81 Ga0209129_1000045 3300025258 Bacteria 272407
82 Ga0209233_1000104 3300025261 Bacteria 272675
83 Ga0209455_1000058 3300025272 Bacteria 342028
84 Ga0209673_1000059 3300025273 Bacteria 268892
85 Ga0209025_1000376 3300025294 Bacteria 92939
86 Ga0209025_1033234 3300025294 Bacteria 2389
87 Ga0209564_1000023 3300025295 Bacteria 555102
88 Ga0209564_1001947 3300025295 Bacteria 18289
89 Ga0209758_1005636 3300025297 Bacteria 9498
90 Ga0209257_1030959 3300025304 Bacteria 1718
91 Ga0207647_10039070 3300025904 Bacteria 2997
92 Ga0207699_10128448 3300025906 Bacteria 1650
93 Ga0207699_10315772 3300025906 Bacteria 1095
94 Ga0207705_10011475 3300025909 Bacteria 6411
95 Ga0207654_10016302 3300025911 Bacteria 3867
96 Ga0207654_10063490 3300025911 Bacteria 2168
97 Ga0207695_10006818 3300025913 Bacteria 14715
98 Ga0207695_10007800 3300025913 Bacteria 13546
99 Ga0207695_10082374 3300025913 Bacteria 3253
100 Ga0207671_10000103 3300025914 Bacteria 129408
101 Ga0207671_10022381 3300025914 Bacteria 4780
102 Ga0207660_10001752 3300025917 Bacteria 14540
103 Ga0207694_10011348 3300025924 Bacteria 6725
104 Ga0207694_10040797 3300025924 Bacteria 3576
105 Ga0207687_10068485 3300025927 Bacteria 2528
106 Ga0207700_10108865 3300025928 Bacteria 2226
107 Ga0207686_10034749 3300025934 Bacteria 3019
108 Ga0207711_10099557 3300025941 Bacteria 2570
109 Ga0207689_10463856 3300025942 Bacteria 1059
110 Ga0207658_10031807 3300025986 Bacteria 3751
111 Ga0207703_10001890 3300026035 Bacteria 18585
112 Ga0207703_10016669 3300026035 Bacteria 5731
113 Ga0207639_10052799 3300026041 Bacteria 3099
114 Ga0207641_10039020 3300026088 Bacteria 3971
115 Ga0207676_10159967 3300026095 Bacteria 1950
116 Ga0207674_10001542 3300026116 Bacteria 29686
117 Ga0207698_10086991 3300026142 Bacteria 2544
118 Ga0209371_1002129 3300027312 Bacteria 11666
119 Ga0268266_10002084 3300028379 Bacteria 22148
120 Ga0265318_10000089 3300028577 Bacteria 82410
121 Ga0265318_10002717 3300028577 Bacteria 9283
122 Ga0265338_10025466 3300028800 Bacteria 6001
123 Ga0268256_1002019 3300030500 Bacteria 10985
124 Ga0265327_10000009 3300031251 Bacteria 616360
125 Ga0307513_10074825 3300031456 Bacteria 3520
126 Ga0307510_10005864 3300033180 Bacteria 14649
127 Ga0373954_0000691 3300035118 Bacteria 12930
128 Ga0373937_0079466 3300036401 Bacteria 3031
129 Ga0436365_0623437 3300039437 Bacteria 1460
130 Ga0451837_1129319 3300041494 Bacteria 1568
131 Ga0451849_1118965 3300041505 Bacteria 2794
132 Ga0450894_003158 3300042131 Bacteria 2168
133 Ga0450896_000110 3300042133 Bacteria 5922
134 Ga0439446_0034416 3300042156 Bacteria 1474
135 Ga0450908_001402 3300042184 Bacteria 4678
136 Ga0451577_0311577 3300042876 Bacteria 1427
137 Ga0466966_0154941 3300044684 Bacteria 1396
138 Ga0466961_0008585 3300044693 Bacteria 6509
139 Ga0451576_0242163 3300045051 Bacteria 1884
140 Ga0495610_0002333 3300046512 Bacteria 16045
141 Ga0495628_0053204 3300046516 Bacteria 3196
142 Ga0495637_0004167 3300046520 Bacteria 7526
143 Ga0495637_0071267 3300046520 Bacteria 1402
144 Ga0495587_0241791 3300046536 Bacteria 1016
145 Ga0495668_0013911 3300046616 Bacteria 4732
146 Ga0495635_0100394 3300046663 Bacteria 1978
147 Ga0495658_0098750 3300046683 Bacteria 1740
148 Ga0495674_0163083 3300047319 Bacteria 1864
149 Ga0495681_0008381 3300047470 Bacteria 6487
150 Ga0495686_0006445 3300047472 Bacteria 8986
151 Ga0495686_0055452 3300047472 Bacteria 2478
152 Ga0496102_0274236 3300048905 Bacteria 1590
153 Ga0496112_0152048 3300048915 Bacteria 2282
154 Ga0496115_0150135 3300048918 Bacteria 1924
155 Ga0501032_0007277 3300049569 Bacteria 8098
156 Ga0501032_0018619 3300049569 Bacteria 4862
157 Ga0501032_0152389 3300049569 Bacteria 1519
158 Ga0501033_0107963 3300049570 Bacteria 2027
159 Ga0501034_0000726 3300049571 Bacteria 49878
160 Ga0501034_0054543 3300049571 Bacteria 4024
161 Ga0501034_0126244 3300049571 Bacteria 2543
162 Ga0501034_0147528 3300049571 Bacteria 2329
163 Ga0501034_0294458 3300049571 Bacteria 1560
164 Ga0501034_0338662 3300049571 Bacteria 1434
165 Ga0501036_0001378 3300049572 Bacteria 18662
166 Ga0501036_0038423 3300049572 Bacteria 4051
167 Ga0501037_0010510 3300049573 Bacteria 6797
168 Ga0501037_0111017 3300049573 Bacteria 1975
169 Ga0501038_0000011 3300049574 Bacteria 181217
170 Ga0501038_0054661 3300049574 Bacteria 3433
171 Ga0501038_0188675 3300049574 Bacteria 1659
172 Ga0501038_0204225 3300049574 Bacteria 1584
173 Ga0501039_0036411 3300049575 Bacteria 3798
174 Ga0501043_0002048 3300049579 Bacteria 17205
175 Ga0501043_0009930 3300049579 Bacteria 7463
176 Ga0501043_0023268 3300049579 Bacteria 4859
177 Ga0501046_0192318 3300049580 Bacteria 1521
178 Ga0501047_0000306 3300049581 Bacteria 56352
179 Ga0501047_0009665 3300049581 Bacteria 9116
180 Ga0501047_0062277 3300049581 Bacteria 3598
181 Ga0501047_0246809 3300049581 Bacteria 1634
182 Ga0501047_0249003 3300049581 Bacteria 1625
183 Ga0501048_0001091 3300049582 Bacteria 20359
184 Ga0501068_0023095 3300049584 Bacteria 3643
185 Ga0501068_0035200 3300049584 Bacteria 2988
186 Ga0501069_0027917 3300049585 Bacteria 3094
187 Ga0501069_0049935 3300049585 Bacteria 2326
188 Ga0501070_0005601 3300049586 Bacteria 10711
189 Ga0501070_0179729 3300049586 Bacteria 1741
190 Ga0501072_0235517 3300049588 Bacteria 1458
191 Ga0501073_0081613 3300049589 Bacteria 2249
192 Ga0501074_0015760 3300049590 Bacteria 5495
193 Ga0501074_0065444 3300049590 Bacteria 2616
194 Ga0501074_0246988 3300049590 Bacteria 1269
195 Ga0501075_0117681 3300049591 Bacteria 2020
196 Ga0501077_0016284 3300049593 Bacteria 4684
197 Ga0501077_0065503 3300049593 Bacteria 2304
198 Ga0501257_002467 3300049686 Bacteria 3905
199 Ga0501080_0000268 3300049742 Bacteria 39347
200 Ga0501080_0006967 3300049742 Bacteria 10199
201 Ga0501080_0014749 3300049742 Bacteria 7195
202 Ga0501081_0091647 3300049743 Bacteria 2138
203 Ga0501083_0001300 3300049744 Bacteria 16891
204 Ga0501083_0008142 3300049744 Bacteria 7417
205 Ga0501035_0091366 3300049822 Bacteria 2680
206 Ga0501035_0166418 3300049822 Bacteria 1906
207 Ga0501044_0003767 3300049823 Bacteria 17034
208 Ga0501044_0008364 3300049823 Bacteria 11345
209 Ga0501044_0014820 3300049823 Bacteria 8404
210 Ga0501044_0156922 3300049823 Bacteria 2254
211 Ga0501044_0164987 3300049823 Bacteria 2190
212 Ga0501044_0208297 3300049823 Bacteria 1910
213 nmdc:mga0yw44_7203_c1 3300050492 Bacteria 5451
214 nmdc:mga08y16_352239_c1 3300050511 Bacteria 1512
215 Ga0500643_001024 3300053087 Bacteria 16995
216 Ga0500556_0045547 3300053104 Bacteria 1566
217 Ga0500622_0002214 3300053156 Bacteria 14340
218 Ga0501084_0013748 3300054114 Bacteria 6698
219 Ga0501084_0060061 3300054114 Bacteria 3183
220 Ga0501082_0001003 3300060353 Bacteria 24930
221 Ga0501082_0051560 3300060353 Bacteria 3547
222 Ga0501082_0095734 3300060353 Bacteria 2566
223 Ga0530510_0219812 3300061734 Bacteria 1412
224 2511436769 2511231035 Bacteria 5341610
225 2535517828 2534681796 Bacteria 7146037
226 2547698049 2547132181 Bacteria 4945084
227 2585828064 2585427591 Bacteria 5482980
228 2585834440 2585427592 Bacteria 5370892
229 2819644270 2818991453 Bacteria 7181617
230 2863422068 2863421361 Bacteria 7300805
231 2904506028 2904504865 Bacteria 5152820
232 2971416374 2971410472 Bacteria 8311090
233 Ga0500641_0001917
234 JGI25151J46595_10001095
235 JGI25165J46597_1000041
236 Ga0055532_1001464
237 Ga0055527_1000278
238 Ga0055535_1000562
239 Ga0055542_1000587
240 Ga0055529_1000418
241 Ga0055526_1001101
242 Ga0055528_1000712
243 Ga0070658_10036416
244 Ga0070690_100077063
245 Ga0068869_100322970
246 Ga0068869_100486675
247 Ga0070666_10046744
248 Ga0070680_100000803
249 Ga0068868_100271211
250 Ga0070660_100043282
251 Ga0070667_100057652
252 Ga0070709_10083014
253 Ga0070711_100334121
254 Ga0070679_100198841
255 Ga0070695_100097690
256 Ga0070696_100127644
257 Ga0070665_100007352
258 Ga0070665_100162537
259 Ga0070664_100030697
260 Ga0068857_100021805
261 Ga0068854_100061555
262 Ga0068856_100093096
263 Ga0068852_100076084
264 Ga0068859_100028436
265 Ga0068859_100335096
266 Ga0068864_100361354
267 Ga0068864_100460671
268 Ga0068863_100476596
269 Ga0068858_100002512
270 Ga0068858_100019433
271 Ga0068858_100023728
272 Ga0068860_100111182
273 Ga0081455_10011303
274 Ga0081540_1038808
275 Ga0097621_100004966
276 Ga0068871_100023663
277 Ga0097620_100028436
278 Ga0097620_100335087
279 Ga0105240_10008735
280 Ga0105240_10019370
281 Ga0105240_10377616
282 Ga0111539_10443811
283 Ga0105245_10028651
284 Ga0105245_10405934
285 Ga0105247_10036735
286 Ga0105241_10005788
287 Ga0105241_10021236
288 Ga0105241_10068073
289 Ga0105248_10069800
290 Ga0105248_10265241
291 Ga0105237_10025802
292 Ga0105237_10025933
293 Ga0105238_10009454
294 Ga0099796_10061238
295 Ga0105239_10001134
296 Ga0105239_10075470
297 Ga0105246_10081800
298 Ga0157371_10016278
299 Ga0157370_10118627
300 Ga0157378_10000515
301 Ga0163162_10049492
302 Ga0157372_10002864
303 Ga0157372_10061095
304 Ga0157375_10015040
305 Ga0163163_10001410
306 Ga0163163_10036920
307 Ga0157379_10003317
308 Ga0209672_100069
309 Ga0209147_100044
310 Ga0209437_102186
311 Ga0209258_100031
312 Ga0209148_1000027
313 Ga0209129_1000045
314 Ga0209233_1000104
315 Ga0209455_1000058
316 Ga0209673_1000059
317 Ga0209025_1000376
318 Ga0209025_1033234
319 Ga0209564_1000023
320 Ga0209564_1001947
321 Ga0209758_1005636
322 Ga0209257_1030959
323 Ga0207647_10039070
324 Ga0207699_10128448
325 Ga0207699_10315772
326 Ga0207705_10011475
327 Ga0207654_10016302
328 Ga0207654_10063490
329 Ga0207695_10006818
330 Ga0207695_10007800
331 Ga0207695_10082374
332 Ga0207671_10000103
333 Ga0207671_10022381
334 Ga0207660_10001752
335 Ga0207694_10011348
336 Ga0207694_10040797
337 Ga0207687_10068485
338 Ga0207700_10108865
339 Ga0207686_10034749
340 Ga0207711_10099557
341 Ga0207689_10463856
342 Ga0207658_10031807
343 Ga0207703_10001890
344 Ga0207703_10016669
345 Ga0207639_10052799
346 Ga0207641_10039020
347 Ga0207676_10159967
348 Ga0207674_10001542
349 Ga0207698_10086991
350 Ga0209371_1002129
351 Ga0268266_10002084
352 Ga0265318_10000089
353 Ga0265318_10002717
354 Ga0265338_10025466
355 Ga0268256_1002019
356 Ga0265327_10000009
357 Ga0307513_10074825
358 Ga0307510_10005864
359 Ga0373954_0000691
360 Ga0373937_0079466
361 Ga0436365_0623437
362 Ga0451837_1129319
363 Ga0451849_1118965
364 Ga0450894_003158
365 Ga0450896_000110
366 Ga0439446_0034416
367 Ga0450908_001402
368 Ga0451577_0311577
369 Ga0466966_0154941
370 Ga0466961_0008585
371 Ga0451576_0242163
372 Ga0495610_0002333
373 Ga0495628_0053204
374 Ga0495637_0004167
375 Ga0495637_0071267
376 Ga0495587_0241791
377 Ga0495668_0013911
378 Ga0495635_0100394
379 Ga0495658_0098750
380 Ga0495674_0163083
381 Ga0495681_0008381
382 Ga0495686_0006445
383 Ga0495686_0055452
384 Ga0496102_0274236
385 Ga0496112_0152048
386 Ga0496115_0150135
387 Ga0501032_0007277
388 Ga0501032_0018619
389 Ga0501032_0152389
390 Ga0501033_0107963
391 Ga0501034_0000726
392 Ga0501034_0054543
393 Ga0501034_0126244
394 Ga0501034_0147528
395 Ga0501034_0294458
396 Ga0501034_0338662
397 Ga0501036_0001378
398 Ga0501036_0038423
399 Ga0501037_0010510
400 Ga0501037_0111017
401 Ga0501038_0000011
402 Ga0501038_0054661
403 Ga0501038_0188675
404 Ga0501038_0204225
405 Ga0501039_0036411
406 Ga0501043_0002048
407 Ga0501043_0009930
408 Ga0501043_0023268
409 Ga0501046_0192318
410 Ga0501047_0000306
411 Ga0501047_0009665
412 Ga0501047_0062277
413 Ga0501047_0246809
414 Ga0501047_0249003
415 Ga0501048_0001091
416 Ga0501068_0023095
417 Ga0501068_0035200
418 Ga0501069_0027917
419 Ga0501069_0049935
420 Ga0501070_0005601
421 Ga0501070_0179729
422 Ga0501072_0235517
423 Ga0501073_0081613
424 Ga0501074_0015760
425 Ga0501074_0065444
426 Ga0501074_0246988
427 Ga0501075_0117681
428 Ga0501077_0016284
429 Ga0501077_0065503
430 Ga0501257_002467
431 Ga0501080_0000268
432 Ga0501080_0006967
433 Ga0501080_0014749
434 Ga0501081_0091647
435 Ga0501083_0001300
436 Ga0501083_0008142
437 Ga0501035_0091366
438 Ga0501035_0166418
439 Ga0501044_0003767
440 Ga0501044_0008364
441 Ga0501044_0014820
442 Ga0501044_0156922
443 Ga0501044_0164987
444 Ga0501044_0208297
445 nmdc:mga0yw44_7203_c1
446 nmdc:mga08y16_352239_c1
447 Ga0500643_001024
448 Ga0500556_0045547
449 Ga0500622_0002214
450 Ga0501084_0013748
451 Ga0501084_0060061
452 Ga0501082_0001003
453 Ga0501082_0051560
454 Ga0501082_0095734
455 Ga0530510_0219812
456 2511436769
457 2535517828
458 2547698049
459 2585828064
460 2585834440
461 2819644270
462 2863422068
463 2904506028
464 2971416374

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

108

302

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

114

349

0.96

PF08659

KR

KR domain

109

289

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9821 60 318
3i3o-assembly2.cif.gz_H 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9745 48 318
3i3o-assembly1.cif.gz_A 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9732 42 318
3r3s-assembly1.cif.gz_D structure of the ygha oxidoreductase from salmonella enterica 0.9645 38 317
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9623 60 318
ID Description Score Start End Superfamily
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9821 60 318 3.40.50.720
af_K7KGR3_30_220_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9793 139 318 3.40.50.720
3r3sA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9652 38 317 3.40.50.720
af_Q75KH3_1_297_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9633 41 318 3.40.50.720
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9623 60 318 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A418IZU3-F1-model_v4 deleted 0.9891 126 255
AF-A0A519T453-F1-model_v4 SDR family oxidoreductase 0.9838 67 317 GO:0016614
AF-A0A418IZU3-F1-model_v4 deleted 0.9816 126 255
AF-A0A4Q5VLK3-F1-model_v4 deleted 0.9792 159 318
AF-A0A1V3CZV1-F1-model_v4 deleted 0.9751 81 318

Map