F346181

General Info

Members Datasets Scaffolds Average Seq Length
233 157 227 324

Family's Representative Sequence

Representative Sequence 3300025972|Ga0207668_10147169|Ga0207668_101471692
Length 372
Sequence VAGRGSAGHADAPAGEMPWGGGGTPLPAALPERPCADYRAPMTTTNSEAVIIRAPGGPEALELSSVQVSAPGSGEVLIRHTAIGLNYIDTYHRSGLYPLPSLPHGLGVEAAGVVEAVGANVSGVALGQRVAYATAGPGAYATRRVVRAELVVPIPAGVSDEAAAAVLLKGMTVEYLVRRTYPVRAGETVLWHAAAGGVGLLACQWLRHLRVRVIGTVGSREKAQLAQRHGCDVPILYTEEGDLSEKVRALTSGAGVAVVYDSVGRATFQSSLRSLAPRGLLVSFGNASGKPEPVDILTLAAHGSLFLTRPTLGHYTRDRAELTSSANAVFELVSQGVLQPMIGQRFALRDIRRAHRALEARETVGSTVILLD

Samples

Sample ID Description Type Environment
1 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
2 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
3 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
4 2854911287 Brucella lupini LUP21 Isolate Unclassified
5 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
63 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
98 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
102 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
129 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
130 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
135 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
136 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
137 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
138 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
142 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
143 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
152 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
153 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
157 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.29
Nodule 0.43
Rhizoplane 2.15
Rhizosphere 93.13
Stem 0
Stem Tuber 0
Unclassified 3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10073720 3300003320 Bacteria 11217
2 Ga0065712_10124659 3300005290 Bacteria 1615
3 Ga0065715_10106698 3300005293 Bacteria 2814
4 Ga0070690_100083448 3300005330 Bacteria 2093
5 Ga0070670_100060939 3300005331 Bacteria 3239
6 Ga0070680_100293141 3300005336 Bacteria 1379
7 Ga0070682_100014633 3300005337 Bacteria 4535
8 Ga0070689_100004696 3300005340 Bacteria 9262
9 Ga0070661_100030714 3300005344 Bacteria 3882
10 Ga0070661_100067981 3300005344 Bacteria 2619
11 Ga0070668_100027898 3300005347 Bacteria 4285
12 Ga0070669_100009778 3300005353 Bacteria 6832
13 Ga0070669_100108086 3300005353 Bacteria 2107
14 Ga0070675_100001686 3300005354 Bacteria 16304
15 Ga0070671_100000983 3300005355 Bacteria 20923
16 Ga0070674_100368872 3300005356 Bacteria 1164
17 Ga0070673_100008572 3300005364 Bacteria 6805
18 Ga0070688_100022385 3300005365 Bacteria 3703
19 Ga0070709_10216245 3300005434 Bacteria 1364
20 Ga0070713_100015155 3300005436 Bacteria 5748
21 Ga0070705_100014523 3300005440 Bacteria 4054
22 Ga0070663_100061224 3300005455 Bacteria 2710
23 Ga0070662_100029929 3300005457 Bacteria 3805
24 Ga0070662_100279751 3300005457 Bacteria 1350
25 Ga0070681_10188926 3300005458 Bacteria 1980
26 Ga0068867_100004699 3300005459 Bacteria 9609
27 Ga0070685_10011442 3300005466 Bacteria 4644
28 Ga0070684_100001057 3300005535 Bacteria 19684
29 Ga0070686_100091501 3300005544 Bacteria 2035
30 Ga0070665_100020930 3300005548 Bacteria 6574
31 Ga0070665_100023439 3300005548 Bacteria 6215
32 Ga0070665_100390058 3300005548 Bacteria 1400
33 Ga0068855_100214249 3300005563 Bacteria 2163
34 Ga0070664_100001071 3300005564 Bacteria 21535
35 Ga0068857_100065154 3300005577 Bacteria 3239
36 Ga0070702_100017133 3300005615 Bacteria 3731
37 Ga0070702_100177029 3300005615 Bacteria 1392
38 Ga0068859_100002393 3300005617 Bacteria 19096
39 Ga0068859_100020696 3300005617 Bacteria 6602
40 Ga0068864_100002178 3300005618 Bacteria 16179
41 Ga0068861_100013088 3300005719 Bacteria 5800
42 Ga0068861_100021769 3300005719 Bacteria 4611
43 Ga0068861_100037343 3300005719 Bacteria 3611
44 Ga0068861_100089190 3300005719 Bacteria 2430
45 Ga0068870_10001332 3300005840 Bacteria 9951
46 Ga0068863_100001758 3300005841 Bacteria 21501
47 Ga0068863_100002362 3300005841 Bacteria 18774
48 Ga0068858_100004782 3300005842 Bacteria 13262
49 Ga0068858_100006938 3300005842 Bacteria 11009
50 Ga0068860_100009660 3300005843 Bacteria 9582
51 Ga0068860_100207676 3300005843 Bacteria 1899
52 Ga0068860_100298581 3300005843 Bacteria 1577
53 Ga0068862_100012130 3300005844 Bacteria 7122
54 Ga0068862_100013925 3300005844 Bacteria 6666
55 Ga0068862_100060577 3300005844 Bacteria 3251
56 Ga0081539_10025396 3300005985 Bacteria 3817
57 Ga0075428_100001213 3300006844 Bacteria 27569
58 Ga0075428_100016638 3300006844 Bacteria 8122
59 Ga0075428_100019829 3300006844 Bacteria 7442
60 Ga0075428_100037326 3300006844 Bacteria 5350
61 Ga0075428_100389689 3300006844 Bacteria 1493
62 Ga0075430_100000626 3300006846 Bacteria 26928
63 Ga0075430_100144734 3300006846 Bacteria 1980
64 Ga0075430_100237538 3300006846 Bacteria 1510
65 Ga0075431_100001454 3300006847 Bacteria 21836
66 Ga0075431_100003248 3300006847 Bacteria 15749
67 Ga0075431_100029704 3300006847 Bacteria 5628
68 Ga0075431_100074587 3300006847 Bacteria 3500
69 Ga0075429_100001409 3300006880 Bacteria 19695
70 Ga0075429_100002507 3300006880 Bacteria 15449
71 Ga0068865_100108615 3300006881 Bacteria 2042
72 Ga0068865_100306845 3300006881 Bacteria 1272
73 Ga0097620_100002393 3300006931 Bacteria 19096
74 Ga0097620_100020696 3300006931 Bacteria 6602
75 Ga0111539_10001135 3300009094 Bacteria 35190
76 Ga0111539_10010803 3300009094 Bacteria 11495
77 Ga0111539_10032904 3300009094 Bacteria 6297
78 Ga0111539_10072571 3300009094 Bacteria 4059
79 Ga0111539_10202466 3300009094 Bacteria 2315
80 Ga0114129_10000072 3300009147 Bacteria 92950
81 Ga0105243_10055207 3300009148 Bacteria 3156
82 Ga0105248_10001901 3300009177 Bacteria 23162
83 Ga0105248_10005530 3300009177 Bacteria 13879
84 Ga0105249_10014418 3300009553 Bacteria 6987
85 Ga0105249_10073222 3300009553 Bacteria 3169
86 Ga0157378_10005835 3300013297 Bacteria 10797
87 Ga0157378_10023863 3300013297 Bacteria 5380
88 Ga0163162_10023322 3300013306 Bacteria 6107
89 Ga0163162_10058075 3300013306 Bacteria 3897
90 Ga0163163_10001920 3300014325 Bacteria 17600
91 Ga0163163_10002205 3300014325 Bacteria 16383
92 Ga0163163_10071119 3300014325 Bacteria 3466
93 Ga0157380_10021846 3300014326 Bacteria 4806
94 Ga0157380_10218573 3300014326 Bacteria 1703
95 Ga0157380_10325283 3300014326 Bacteria 1427
96 Ga0157379_10004203 3300014968 Bacteria 12294
97 Ga0157379_10008855 3300014968 Bacteria 8774
98 Ga0183363_1008 3300015690 Bacteria 194027
99 Ga0207642_10222431 3300025899 Bacteria 1056
100 Ga0207688_10050421 3300025901 Bacteria 2330
101 Ga0207688_10208144 3300025901 Bacteria 1174
102 Ga0207707_10351063 3300025912 Bacteria 1271
103 Ga0207660_10158969 3300025917 Bacteria 1742
104 Ga0207652_10326188 3300025921 Bacteria 1386
105 Ga0207681_10020733 3300025923 Bacteria 4170
106 Ga0207644_10061042 3300025931 Bacteria 2729
107 Ga0207706_10022427 3300025933 Bacteria 5667
108 Ga0207706_10170744 3300025933 Bacteria 1911
109 Ga0207709_10036647 3300025935 Bacteria 2908
110 Ga0207670_10022818 3300025936 Bacteria 3885
111 Ga0207669_10022761 3300025937 Bacteria 3335
112 Ga0207704_10075635 3300025938 Bacteria 2154
113 Ga0207711_10003936 3300025941 Bacteria 12776
114 Ga0207711_10010259 3300025941 Bacteria 7778
115 Ga0207689_10130925 3300025942 Bacteria 2065
116 Ga0207679_10008393 3300025945 Bacteria 6579
117 Ga0207651_10052623 3300025960 Bacteria 2777
118 Ga0207712_10108601 3300025961 Bacteria 2077
119 Ga0207668_10042571 3300025972 Bacteria 3076
120 Ga0207668_10147169 3300025972 Bacteria 1819
121 Ga0207668_10238097 3300025972 Bacteria 1471
122 Ga0207703_10051482 3300026035 Bacteria 3337
123 Ga0207678_10069664 3300026067 Bacteria 3016
124 Ga0207641_10005829 3300026088 Bacteria 10453
125 Ga0207648_10055252 3300026089 Bacteria 3466
126 Ga0207676_10002322 3300026095 Bacteria 13651
127 Ga0207674_10013638 3300026116 Bacteria 9001
128 Ga0207675_100002290 3300026118 Bacteria 19014
129 Ga0207675_100078091 3300026118 Bacteria 3101
130 Ga0207675_100127919 3300026118 Bacteria 2407
131 Ga0207675_100206608 3300026118 Bacteria 1887
132 Ga0207428_10029508 3300027907 Bacteria 4545
133 Ga0207428_10240975 3300027907 Bacteria 1351
134 Ga0268266_10021953 3300028379 Bacteria 5440
135 Ga0268266_10029355 3300028379 Bacteria 4676
136 Ga0268265_10000408 3300028380 Bacteria 46038
137 Ga0268265_10091933 3300028380 Bacteria 2427
138 Ga0268264_10080383 3300028381 Bacteria 2783
139 Ga0268264_10340703 3300028381 Bacteria 1424
140 Ga0268264_10578520 3300028381 Bacteria 1104
141 Ga0265338_10003492 3300028800 Bacteria 22066
142 Ga0265331_10000067 3300031250 Bacteria 158073
143 Ga0307513_10339306 3300031456 Bacteria 1254
144 Ga0307509_10000018 3300031507 Bacteria 258998
145 Ga0307408_100007265 3300031548 Bacteria 7327
146 Ga0316575_10019808 3300031665 Bacteria 2576
147 Ga0316576_10086885 3300031727 Bacteria 2326
148 Ga0316578_10071042 3300031728 Bacteria 2061
149 Ga0316578_10143241 3300031728 Bacteria 1439
150 Ga0307416_100113103 3300032002 Bacteria 2398
151 Ga0307416_100257842 3300032002 Bacteria 1702
152 Ga0373958_0018710 3300034819 Bacteria 1259
153 Ga0373932_0076681 3300035112 Bacteria 1048
154 Ga0373946_0177049 3300035171 Bacteria 1010
155 Ga0373931_0049794 3300035691 Bacteria 2227
156 Ga0373927_0020620 3300035695 Bacteria 4322
157 Ga0373927_0026714 3300035695 Bacteria 3773
158 Ga0373937_0113553 3300036401 Bacteria 2520
159 Ga0373937_0530405 3300036401 Bacteria 1118
160 Ga0316584_0008230 3300036712 Bacteria 7177
161 Ga0316584_0022006 3300036712 Bacteria 4644
162 Ga0373925_0032136 3300037068 Bacteria 3861
163 Ga0395899_0001791 3300037312 Bacteria 17799
164 Ga0395899_0013175 3300037312 Bacteria 6324
165 Ga0395899_0146996 3300037312 Unclassified 1673
166 Ga0395900_0060869 3300037418 Bacteria 3883
167 Ga0395900_0132310 3300037418 Bacteria 2556
168 Ga0395898_0135864 3300037466 Bacteria 2354
169 Ga0395905_0002436 3300037471 Bacteria 20618
170 Ga0395905_0225393 3300037471 Bacteria 1754
171 Ga0395901_0014830 3300038443 Bacteria 7917
172 Ga0395901_0065328 3300038443 Bacteria 3788
173 Ga0400483_128561 3300039062 Bacteria 3168
174 Ga0436361_0964530 3300039447 Bacteria 1754
175 Ga0453684_0024906 3300044712 Bacteria 8713
176 Ga0453684_0304640 3300044712 Bacteria 1810
177 Ga0451576_0020339 3300045051 Bacteria 7230
178 Ga0451576_0117343 3300045051 Bacteria 2771
179 Ga0451576_0351624 3300045051 Bacteria 1543
180 Ga0466967_0340428 3300045976 Bacteria 1450
181 Ga0495629_0000003 3300046459 Bacteria 529162
182 Ga0495625_0040580 3300046660 Bacteria 3392
183 Ga0495635_0011450 3300046663 Bacteria 6220
184 Ga0495600_0034922 3300046809 Bacteria 3264
185 Ga0495680_0012529 3300047322 Bacteria 7458
186 Ga0495684_0017825 3300047471 Bacteria 5470
187 Ga0496107_0215708 3300048910 Bacteria 1427
188 Ga0496107_0234069 3300048910 Bacteria 1367
189 Ga0496110_0020425 3300048913 Bacteria 5593
190 Ga0496112_0295022 3300048915 Bacteria 1567
191 Ga0496113_0153925 3300048916 Bacteria 1815
192 Ga0501290_000477 3300049513 Bacteria 6226
193 Ga0501292_000012 3300049515 Bacteria 69398
194 Ga0501034_0344695 3300049571 Bacteria 1419
195 Ga0501071_0255644 3300049587 Bacteria 1323
196 Ga0501072_0253005 3300049588 Bacteria 1403
197 Ga0501224_001490 3300049664 Bacteria 3107
198 Ga0501249_020494 3300049679 Bacteria 1438
199 Ga0501259_002107 3300049688 Bacteria 3276
200 Ga0501261_000115 3300049690 Bacteria 12129
201 Ga0501225_0010525 3300049705 Bacteria 2618
202 Ga0501079_0093507 3300049741 Bacteria 2330
203 Ga0501083_0018416 3300049744 Bacteria 4867
204 Ga0501279_000004 3300049775 Bacteria 175612
205 Ga0501281_00433 3300049777 Bacteria 4105
206 Ga0501283_001651 3300049779 Bacteria 2905
207 Ga0501044_0057345 3300049823 Bacteria 3997
208 nmdc:mga05p37_135_c1 3300050507 Bacteria 68116
209 nmdc:mga09592_17816_c1 3300050508 Bacteria 5820
210 nmdc:mga0qj67_129968_c1 3300050509 Bacteria 2040
211 nmdc:mga0qj67_507_c1 3300050509 Bacteria 26621
212 nmdc:mga06r32_11597_c1 3300050510 Bacteria 7935
213 nmdc:mga06r32_1617_c1 3300050510 Bacteria 20320
214 nmdc:mga06r32_39946_c1 3300050510 Bacteria 4453
215 nmdc:mga06r32_96_c1 3300050510 Bacteria 61629
216 nmdc:mga08y16_11289_c1 3300050511 Bacteria 9386
217 nmdc:mga08y16_39173_c1 3300050511 Bacteria 4973
218 nmdc:mga08y16_6496_c1 3300050511 Bacteria 12260
219 Ga0495619_0008746 3300053085 Bacteria 6403
220 Ga0500643_026311 3300053087 Unclassified 1823
221 Ga0500655_006674 3300053133 Bacteria 2076
222 Ga0500559_0012775 3300053136 Bacteria 3565
223 Ga0501084_0282117 3300054114 Bacteria 1403
224 Ga0501082_0007205 3300060353 Bacteria 9585
225 Ga0501082_0146568 3300060353 Bacteria 2049
226 Ga0530510_0017662 3300061734 Bacteria 5055
227 Ga0530510_0220398 3300061734 Bacteria 1410

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035112 Ga0373932_0076681 Ga0373932_0076681_215_1021 267
2 3300061734 Ga0530510_0017662 Ga0530510_0017662_27_884 284
3 3300036401 Ga0373937_0530405 Ga0373937_0530405_199_1086 293
4 3300039447 Ga0436361_0964530 Ga0436361_0964530_230_1201 303
5 3300006880 Ga0075429_100001409 Ga0075429_10000140912 308
6 3300053136 Ga0500559_0012775 Ga0500559_0012775_2348_3400 308
7 3300053133 Ga0500655_006674 Ga0500655_006674_242_1210 309
8 3300005548 Ga0070665_100390058 Ga0070665_1003900582 310
9 3300049744 Ga0501083_0018416 Ga0501083_0018416_2095_3066 315
10 3300044712 Ga0453684_0304640 Ga0453684_0304640_597_1574 316
11 3300039062 Ga0400483_128561 Ga0400483_128561_1932_2912 317
12 3300031727 Ga0316576_10086885 Ga0316576_100868852 318
13 3300031728 Ga0316578_10143241 Ga0316578_101432411 318
14 3300036712 Ga0316584_0022006 Ga0316584_0022006_2112_3086 318
15 iso_pu_bacteria 8054563764 8054564559 318
16 iso_pu_bacteria 2522572158 2523103402 319
17 iso_pu_bacteria 2830075706 2830078374 319
18 iso_pu_bacteria 2842333319 2842335369 319
19 iso_pu_bacteria 2854911287 2854912732 319
20 3300005353 Ga0070669_100009778 Ga0070669_1000097784 320
21 3300005355 Ga0070671_100000983 Ga0070671_1000009835 320
22 3300005548 Ga0070665_100023439 Ga0070665_1000234395 320
23 3300005617 Ga0068859_100002393 Ga0068859_1000023939 320
24 3300005719 Ga0068861_100021769 Ga0068861_1000217692 320
25 3300005841 Ga0068863_100002362 Ga0068863_1000023629 320
26 3300005842 Ga0068858_100004782 Ga0068858_1000047828 320
27 3300005843 Ga0068860_100009660 Ga0068860_1000096604 320
28 3300005844 Ga0068862_100060577 Ga0068862_1000605773 320
29 3300006931 Ga0097620_100002393 Ga0097620_1000023939 320
30 3300009177 Ga0105248_10005530 Ga0105248_100055309 320
31 3300013306 Ga0163162_10023322 Ga0163162_100233223 320
32 3300014325 Ga0163163_10071119 Ga0163163_100711193 320
33 3300014968 Ga0157379_10004203 Ga0157379_100042036 320
34 3300025931 Ga0207644_10061042 Ga0207644_100610423 320
35 3300025941 Ga0207711_10003936 Ga0207711_100039367 320
36 3300026088 Ga0207641_10005829 Ga0207641_100058292 320
37 3300026118 Ga0207675_100078091 Ga0207675_1000780912 320
38 3300028379 Ga0268266_10021953 Ga0268266_100219533 320
39 3300028381 Ga0268264_10080383 Ga0268264_100803833 320
40 3300005344 Ga0070661_100067981 Ga0070661_1000679813 321
41 3300014968 Ga0157379_10008855 Ga0157379_100088552 321
42 3300031250 Ga0265331_10000067 Ga0265331_1000006740 321
43 3300035695 Ga0373927_0020620 Ga0373927_0020620_1132_2100 321
44 3300037068 Ga0373925_0032136 Ga0373925_0032136_341_1309 321
45 3300048910 Ga0496107_0234069 Ga0496107_0234069_36_1004 321
46 3300005290 Ga0065712_10124659 Ga0065712_101246592 322
47 3300005293 Ga0065715_10106698 Ga0065715_101066983 322
48 3300005330 Ga0070690_100083448 Ga0070690_1000834481 322
49 3300005331 Ga0070670_100060939 Ga0070670_1000609393 322
50 3300005336 Ga0070680_100293141 Ga0070680_1002931411 322
51 3300005340 Ga0070689_100004696 Ga0070689_1000046963 322
52 3300005344 Ga0070661_100030714 Ga0070661_1000307143 322
53 3300005347 Ga0070668_100027898 Ga0070668_1000278985 322
54 3300005353 Ga0070669_100108086 Ga0070669_1001080862 322
55 3300005354 Ga0070675_100001686 Ga0070675_10000168611 322
56 3300005356 Ga0070674_100368872 Ga0070674_1003688721 322
57 3300005364 Ga0070673_100008572 Ga0070673_1000085725 322
58 3300005365 Ga0070688_100022385 Ga0070688_1000223853 322
59 3300005440 Ga0070705_100014523 Ga0070705_1000145234 322
60 3300005457 Ga0070662_100029929 Ga0070662_1000299294 322
61 3300005457 Ga0070662_100279751 Ga0070662_1002797511 322
62 3300005458 Ga0070681_10188926 Ga0070681_101889261 322
63 3300005459 Ga0068867_100004699 Ga0068867_1000046997 322
64 3300005466 Ga0070685_10011442 Ga0070685_100114421 322
65 3300005535 Ga0070684_100001057 Ga0070684_1000010579 322
66 3300005544 Ga0070686_100091501 Ga0070686_1000915012 322
67 3300005548 Ga0070665_100020930 Ga0070665_1000209305 322
68 3300005563 Ga0068855_100214249 Ga0068855_1002142492 322
69 3300005564 Ga0070664_100001071 Ga0070664_1000010719 322
70 3300005577 Ga0068857_100065154 Ga0068857_1000651543 322
71 3300005615 Ga0070702_100017133 Ga0070702_1000171333 322
72 3300005617 Ga0068859_100020696 Ga0068859_1000206961 322
73 3300005618 Ga0068864_100002178 Ga0068864_10000217810 322
74 3300005719 Ga0068861_100013088 Ga0068861_1000130886 322
75 3300005719 Ga0068861_100089190 Ga0068861_1000891902 322
76 3300005840 Ga0068870_10001332 Ga0068870_100013322 322
77 3300005841 Ga0068863_100001758 Ga0068863_1000017588 322
78 3300005842 Ga0068858_100006938 Ga0068858_1000069381 322
79 3300005843 Ga0068860_100207676 Ga0068860_1002076762 322
80 3300005843 Ga0068860_100298581 Ga0068860_1002985812 322
81 3300005844 Ga0068862_100012130 Ga0068862_1000121302 322
82 3300005844 Ga0068862_100013925 Ga0068862_1000139256 322
83 3300006844 Ga0075428_100001213 Ga0075428_10000121313 322
84 3300006844 Ga0075428_100019829 Ga0075428_1000198296 322
85 3300006844 Ga0075428_100037326 Ga0075428_1000373263 322
86 3300006844 Ga0075428_100389689 Ga0075428_1003896892 322
87 3300006846 Ga0075430_100000626 Ga0075430_10000062618 322
88 3300006846 Ga0075430_100144734 Ga0075430_1001447342 322
89 3300006846 Ga0075430_100237538 Ga0075430_1002375382 322
90 3300006847 Ga0075431_100001454 Ga0075431_1000014544 322
91 3300006847 Ga0075431_100003248 Ga0075431_10000324812 322
92 3300006847 Ga0075431_100029704 Ga0075431_1000297044 322
93 3300006847 Ga0075431_100074587 Ga0075431_1000745873 322
94 3300006880 Ga0075429_100002507 Ga0075429_10000250712 322
95 3300006881 Ga0068865_100108615 Ga0068865_1001086152 322
96 3300006931 Ga0097620_100020696 Ga0097620_1000206961 322
97 3300009094 Ga0111539_10001135 Ga0111539_100011358 322
98 3300009094 Ga0111539_10032904 Ga0111539_100329044 322
99 3300009094 Ga0111539_10072571 Ga0111539_100725712 322
100 3300009094 Ga0111539_10202466 Ga0111539_102024662 322
101 3300009147 Ga0114129_10000072 Ga0114129_1000007279 322
102 3300009148 Ga0105243_10055207 Ga0105243_100552072 322
103 3300009177 Ga0105248_10001901 Ga0105248_1000190115 322
104 3300009553 Ga0105249_10073222 Ga0105249_100732222 322
105 3300013297 Ga0157378_10023863 Ga0157378_100238634 322
106 3300013306 Ga0163162_10058075 Ga0163162_100580753 322
107 3300014325 Ga0163163_10002205 Ga0163163_100022058 322
108 3300014326 Ga0157380_10218573 Ga0157380_102185732 322
109 3300025899 Ga0207642_10222431 Ga0207642_102224311 322
110 3300025901 Ga0207688_10050421 Ga0207688_100504212 322
111 3300025901 Ga0207688_10208144 Ga0207688_102081442 322
112 3300025912 Ga0207707_10351063 Ga0207707_103510632 322
113 3300025917 Ga0207660_10158969 Ga0207660_101589692 322
114 3300025921 Ga0207652_10326188 Ga0207652_103261882 322
115 3300025923 Ga0207681_10020733 Ga0207681_100207334 322
116 3300025933 Ga0207706_10022427 Ga0207706_100224274 322
117 3300025933 Ga0207706_10170744 Ga0207706_101707442 322
118 3300025935 Ga0207709_10036647 Ga0207709_100366474 322
119 3300025936 Ga0207670_10022818 Ga0207670_100228183 322
120 3300025937 Ga0207669_10022761 Ga0207669_100227614 322
121 3300025938 Ga0207704_10075635 Ga0207704_100756352 322
122 3300025941 Ga0207711_10010259 Ga0207711_100102591 322
123 3300025942 Ga0207689_10130925 Ga0207689_101309252 322
124 3300025945 Ga0207679_10008393 Ga0207679_100083932 322
125 3300025960 Ga0207651_10052623 Ga0207651_100526232 322
126 3300025961 Ga0207712_10108601 Ga0207712_101086012 322
127 3300025972 Ga0207668_10042571 Ga0207668_100425712 322
128 3300025972 Ga0207668_10238097 Ga0207668_102380972 322
129 3300026035 Ga0207703_10051482 Ga0207703_100514824 322
130 3300026089 Ga0207648_10055252 Ga0207648_100552524 322
131 3300026095 Ga0207676_10002322 Ga0207676_100023224 322
132 3300026116 Ga0207674_10013638 Ga0207674_100136383 322
133 3300026118 Ga0207675_100127919 Ga0207675_1001279192 322
134 3300026118 Ga0207675_100206608 Ga0207675_1002066082 322
135 3300027907 Ga0207428_10029508 Ga0207428_100295084 322
136 3300027907 Ga0207428_10240975 Ga0207428_102409752 322
137 3300028379 Ga0268266_10029355 Ga0268266_100293555 322
138 3300028380 Ga0268265_10000408 Ga0268265_100004087 322
139 3300028380 Ga0268265_10091933 Ga0268265_100919332 322
140 3300028381 Ga0268264_10340703 Ga0268264_103407032 322
141 3300031456 Ga0307513_10339306 Ga0307513_103393062 322
142 3300031548 Ga0307408_100007265 Ga0307408_1000072656 322
143 3300031728 Ga0316578_10071042 Ga0316578_100710421 322
144 3300032002 Ga0307416_100113103 Ga0307416_1001131033 322
145 3300032002 Ga0307416_100257842 Ga0307416_1002578422 322
146 3300034819 Ga0373958_0018710 Ga0373958_0018710_268_1239 322
147 3300035691 Ga0373931_0049794 Ga0373931_0049794_175_1146 322
148 3300036712 Ga0316584_0008230 Ga0316584_0008230_2250_3224 322
149 3300045051 Ga0451576_0020339 Ga0451576_0020339_4907_5878 322
150 3300048910 Ga0496107_0215708 Ga0496107_0215708_65_1036 322
151 3300048913 Ga0496110_0020425 Ga0496110_0020425_1784_2755 322
152 3300048915 Ga0496112_0295022 Ga0496112_0295022_66_1037 322
153 3300048916 Ga0496113_0153925 Ga0496113_0153925_256_1227 322
154 3300049679 Ga0501249_020494 Ga0501249_020494_14_985 322
155 3300050507 nmdc:mga05p37_135_c1 nmdc:mga05p37_135_c1_8825_9805 322
156 3300050508 nmdc:mga09592_17816_c1 nmdc:mga09592_17816_c1_4761_5732 322
157 3300050509 nmdc:mga0qj67_129968_c1 nmdc:mga0qj67_129968_c1_483_1454 322
158 3300050509 nmdc:mga0qj67_507_c1 nmdc:mga0qj67_507_c1_6213_7193 322
159 3300050510 nmdc:mga06r32_11597_c1 nmdc:mga06r32_11597_c1_2997_3968 322
160 3300050510 nmdc:mga06r32_1617_c1 nmdc:mga06r32_1617_c1_10584_11555 322
161 3300050510 nmdc:mga06r32_39946_c1 nmdc:mga06r32_39946_c1_1586_2557 322
162 3300050510 nmdc:mga06r32_96_c1 nmdc:mga06r32_96_c1_10980_11960 322
163 3300050511 nmdc:mga08y16_11289_c1 nmdc:mga08y16_11289_c1_1749_2720 322
164 3300050511 nmdc:mga08y16_39173_c1 nmdc:mga08y16_39173_c1_1948_2919 322
165 3300060353 Ga0501082_0007205 Ga0501082_0007205_4921_5892 322
166 iso_pu_bacteria 2939669807 2939670788 322
167 3300003320 rootH2_10073720 rootH2_100737206 323
168 3300005337 Ga0070682_100014633 Ga0070682_1000146332 323
169 3300005434 Ga0070709_10216245 Ga0070709_102162451 323
170 3300005436 Ga0070713_100015155 Ga0070713_1000151555 323
171 3300005455 Ga0070663_100061224 Ga0070663_1000612242 323
172 3300005615 Ga0070702_100177029 Ga0070702_1001770292 323
173 3300005719 Ga0068861_100037343 Ga0068861_1000373433 323
174 3300005985 Ga0081539_10025396 Ga0081539_100253965 323
175 3300006844 Ga0075428_100016638 Ga0075428_1000166387 323
176 3300006881 Ga0068865_100306845 Ga0068865_1003068451 323
177 3300009094 Ga0111539_10010803 Ga0111539_1001080311 323
178 3300009553 Ga0105249_10014418 Ga0105249_100144182 323
179 3300013297 Ga0157378_10005835 Ga0157378_100058357 323
180 3300014325 Ga0163163_10001920 Ga0163163_1000192011 323
181 3300014326 Ga0157380_10021846 Ga0157380_100218463 323
182 3300014326 Ga0157380_10325283 Ga0157380_103252831 323
183 3300015690 Ga0183363_1008 Ga0183363_100871 323
184 3300025972 Ga0207668_10147169 Ga0207668_101471692 323
185 3300026067 Ga0207678_10069664 Ga0207678_100696642 323
186 3300026118 Ga0207675_100002290 Ga0207675_10000229018 323
187 3300028381 Ga0268264_10578520 Ga0268264_105785201 323
188 3300028800 Ga0265338_10003492 Ga0265338_100034929 323
189 3300031507 Ga0307509_10000018 Ga0307509_10000018138 323
190 3300031665 Ga0316575_10019808 Ga0316575_100198082 323
191 3300035171 Ga0373946_0177049 Ga0373946_0177049_14_1000 323
192 3300035695 Ga0373927_0026714 Ga0373927_0026714_1132_2118 323
193 3300036401 Ga0373937_0113553 Ga0373937_0113553_1170_2144 323
194 3300037312 Ga0395899_0001791 Ga0395899_0001791_13129_14139 323
195 3300037312 Ga0395899_0013175 Ga0395899_0013175_2396_3406 323
196 3300037312 Ga0395899_0146996 Ga0395899_0146996_236_1225 323
197 3300037418 Ga0395900_0060869 Ga0395900_0060869_519_1529 323
198 3300037418 Ga0395900_0132310 Ga0395900_0132310_15_998 323
199 3300037466 Ga0395898_0135864 Ga0395898_0135864_644_1654 323
200 3300037471 Ga0395905_0002436 Ga0395905_0002436_18812_19801 323
201 3300037471 Ga0395905_0225393 Ga0395905_0225393_547_1521 323
202 3300038443 Ga0395901_0014830 Ga0395901_0014830_2916_3926 323
203 3300038443 Ga0395901_0065328 Ga0395901_0065328_1435_2496 323
204 3300044712 Ga0453684_0024906 Ga0453684_0024906_2451_3428 323
205 3300045051 Ga0451576_0117343 Ga0451576_0117343_1761_2744 323
206 3300045051 Ga0451576_0351624 Ga0451576_0351624_106_1080 323
207 3300045976 Ga0466967_0340428 Ga0466967_0340428_411_1400 323
208 3300046459 Ga0495629_0000003 Ga0495629_0000003_344010_344996 323
209 3300046660 Ga0495625_0040580 Ga0495625_0040580_38_1021 323
210 3300046663 Ga0495635_0011450 Ga0495635_0011450_869_1855 323
211 3300046809 Ga0495600_0034922 Ga0495600_0034922_1940_2926 323
212 3300047322 Ga0495680_0012529 Ga0495680_0012529_3707_4693 323
213 3300047471 Ga0495684_0017825 Ga0495684_0017825_3760_4746 323
214 3300049513 Ga0501290_000477 Ga0501290_000477_1414_2394 323
215 3300049515 Ga0501292_000012 Ga0501292_000012_1430_2410 323
216 3300049571 Ga0501034_0344695 Ga0501034_0344695_350_1324 323
217 3300049587 Ga0501071_0255644 Ga0501071_0255644_14_994 323
218 3300049588 Ga0501072_0253005 Ga0501072_0253005_395_1375 323
219 3300049664 Ga0501224_001490 Ga0501224_001490_742_1722 323
220 3300049688 Ga0501259_002107 Ga0501259_002107_1226_2206 323
221 3300049690 Ga0501261_000115 Ga0501261_000115_9745_10725 323
222 3300049705 Ga0501225_0010525 Ga0501225_0010525_390_1370 323
223 3300049741 Ga0501079_0093507 Ga0501079_0093507_766_1746 323
224 3300049775 Ga0501279_000004 Ga0501279_000004_56512_57492 323
225 3300049777 Ga0501281_00433 Ga0501281_00433_1274_2254 323
226 3300049779 Ga0501283_001651 Ga0501283_001651_1179_2159 323
227 3300049823 Ga0501044_0057345 Ga0501044_0057345_1715_2725 323
228 3300050511 nmdc:mga08y16_6496_c1 nmdc:mga08y16_6496_c1_9947_10936 323
229 3300053085 Ga0495619_0008746 Ga0495619_0008746_3706_4692 323
230 3300053087 Ga0500643_026311 Ga0500643_026311_505_1488 323
231 3300054114 Ga0501084_0282117 Ga0501084_0282117_345_1325 323
232 3300060353 Ga0501082_0146568 Ga0501082_0146568_21_1001 323
233 3300061734 Ga0530510_0220398 Ga0530510_0220398_118_1098 323

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

197

337

0.93

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

72

156

0.93

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

229

369

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9816 1 323
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9786 1 323
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9776 1 323
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9746 1 323
4rvu-assembly2.cif.gz_C the native structure of mycobacterial rv1454c complexed with nadph 0.9713 3 323
ID Description Score Start End Superfamily
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9972 124 268 3.40.50.720
af_Q336S6_1_326_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9872 1 322 3.90.180.10
af_A0A0R0I1N1_1_153_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9839 1 135 3.90.180.10
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9835 124 268 3.40.50.720
af_P28304_1_127_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9834 1 125 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A7U7GCB8-F1-model_v4 Quinone oxidoreductase, NADPH-dependent (EC 1.6.5.5) 0.9931 1 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A536V2R0-F1-model_v4 Zinc-binding dehydrogenase 0.9909 137 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A528FI11-F1-model_v4 Quinone oxidoreductase 0.9903 108 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A5B7AB61-F1-model_v4 Putative quinone oxidoreductase isoform X2 (EC 1.6.5.5) 0.9901 123 323 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A7U7GCB8-F1-model_v4 Quinone oxidoreductase, NADPH-dependent (EC 1.6.5.5) 0.9901 1 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402

Feature Viewer

pLDDT pTM Quality
96.91 0.93 High
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Predicted Structure (AlphaFold2)

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