F346294
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 233 | 159 | 466 | 342 |
Family's Representative Sequence
| Representative Sequence | 3300037418|Ga0395900_0319183|Ga0395900_0319183_318_1511 |
| Length | 397 |
| Sequence | MRRKRLDRAPEDRFSAKQPILLGNPATEAFAFSGRDDEGSGGHSSGPLGALALSAKGCSTISRLPMPRLKPIEIGPVRIEAPVILAPMTGVTDLPFRRVVKRYGAGLTVSEMIASEAMIRETRQSLQKSLWDESEQPVSLQLAGCEPRVMAEAAKLNEQRGAAIIDINMGCPVRKVVNGWAGSALMRDVTTAAAIIDATVKAVSVPVTLKMRMGWDHSSLNAPELARVAEDLGVKMITVHGRTRCQMYKGDADWAFVRQVKEAVSLPVIVNGDICSVEDAREALRQSGADGVMIGRGAYGRPWLVAQAMADLVSGSAWNEPSLDEQLETVLGQYDEMLTLYGQQTGVNLARKHIGWYTKGLPGSAEFRNRVNQQDDPAVVVAMLREFYEPWLARAAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 25 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 26 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 27 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 28 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 29 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 31 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 43 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 44 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 45 | 3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Metagenome | Rhizosphere |
| 46 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 70 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 71 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 72 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 73 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 74 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 75 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 76 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 77 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 78 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 79 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 80 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 81 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 82 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 83 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 84 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 85 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 86 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 87 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 88 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 89 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 90 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 91 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 92 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 93 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 94 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 95 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 96 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 97 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 98 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 99 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 100 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 101 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 102 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 103 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 104 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 118 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 119 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 120 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 121 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 122 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 123 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 124 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 125 | 3300049513 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control | Metagenome | Rhizosphere |
| 126 | 3300049515 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought | Metagenome | Rhizosphere |
| 127 | 3300049517 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control | Metagenome | Rhizosphere |
| 128 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049653 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control | Metagenome | Rhizosphere |
| 131 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 132 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 133 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 134 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 135 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 136 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 137 | 3300049775 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought | Metagenome | Rhizosphere |
| 138 | 3300049776 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought | Metagenome | Rhizosphere |
| 139 | 3300049777 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control | Metagenome | Rhizosphere |
| 140 | 3300049778 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control | Metagenome | Rhizosphere |
| 141 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049853 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought | Metagenome | Rhizosphere |
| 144 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 149 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 150 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 151 | 2643221588 | Altererythrobacter sp. Root672 | Isolate | Unclassified |
| 152 | 2751185897 | Sphingomonas panacis DCY99 | Isolate | Unclassified |
| 153 | 2842775625 | Roseomonas sp. R-71825 | Isolate | Unclassified |
| 154 | 2894772417 | Roseomonas oryzicola KCTC 22478 | Isolate | Rhizosphere |
| 155 | 2909399089 | Nguyenibacter vanlangensis LMG 31431 | Isolate | Unclassified |
| 156 | 2929199973 | Roseomonas sp. R-73070 Hybrid assembly | Isolate | Unclassified |
| 157 | 641228493 | Gluconacetobacter diazotrophicus PA1 5 | Isolate | Unclassified |
| 158 | 643348555 | Gluconacetobacter diazotrophicus PA1 5 | Isolate | Unclassified |
| 159 | 8055909800 | Plastoroseomonas hellenica LMG 31523 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.71 |
| Metatranscriptomes | 0.43 |
| Isolates | 3.86 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.86 |
| Nodule | 0 |
| Rhizoplane | 1.29 |
| Rhizosphere | 87.55 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0395900_0319183 | 3300037418 | Bacteria | 1534 |
| 2 | JGI25406J46586_10000221 | 3300003203 | Bacteria | 25171 |
| 3 | Ga0065707_10216254 | 3300005295 | Bacteria | 1243 |
| 4 | Ga0070670_100016525 | 3300005331 | Bacteria | 6334 |
| 5 | Ga0070677_10001096 | 3300005333 | Bacteria | 8710 |
| 6 | Ga0070680_100003430 | 3300005336 | Bacteria | 11835 |
| 7 | Ga0070682_100058414 | 3300005337 | Bacteria | 2432 |
| 8 | Ga0070660_100006115 | 3300005339 | Bacteria | 8325 |
| 9 | Ga0070660_100023747 | 3300005339 | Bacteria | 4544 |
| 10 | Ga0070661_100003178 | 3300005344 | Bacteria | 11318 |
| 11 | Ga0070661_100011466 | 3300005344 | Bacteria | 6174 |
| 12 | Ga0070661_100048409 | 3300005344 | Bacteria | 3112 |
| 13 | Ga0070659_100000001 | 3300005366 | Bacteria | 576390 |
| 14 | Ga0070659_100005856 | 3300005366 | Bacteria | 8858 |
| 15 | Ga0070709_10018462 | 3300005434 | Bacteria | 4016 |
| 16 | Ga0070709_10028350 | 3300005434 | Bacteria | 3338 |
| 17 | Ga0070714_100099652 | 3300005435 | Bacteria | 2557 |
| 18 | Ga0070713_100020559 | 3300005436 | Bacteria | 5064 |
| 19 | Ga0070710_10026220 | 3300005437 | Bacteria | 3094 |
| 20 | Ga0070710_10167457 | 3300005437 | Bacteria | 1367 |
| 21 | Ga0070663_100015465 | 3300005455 | Bacteria | 4928 |
| 22 | Ga0070662_100002114 | 3300005457 | Bacteria | 12181 |
| 23 | Ga0070662_100016916 | 3300005457 | Bacteria | 4904 |
| 24 | Ga0070681_10008301 | 3300005458 | Bacteria | 10168 |
| 25 | Ga0070681_10036214 | 3300005458 | Bacteria | 4956 |
| 26 | Ga0070679_100000005 | 3300005530 | Bacteria | 263201 |
| 27 | Ga0070679_100005269 | 3300005530 | Bacteria | 11969 |
| 28 | Ga0070679_100058566 | 3300005530 | Bacteria | 3838 |
| 29 | Ga0070679_100187088 | 3300005530 | Bacteria | 2041 |
| 30 | Ga0070684_100050812 | 3300005535 | Bacteria | 3601 |
| 31 | Ga0068853_100032254 | 3300005539 | Bacteria | 4436 |
| 32 | Ga0070665_100000086 | 3300005548 | Bacteria | 178229 |
| 33 | Ga0070665_100113921 | 3300005548 | Bacteria | 2707 |
| 34 | Ga0068855_100064438 | 3300005563 | Bacteria | 4274 |
| 35 | Ga0070664_100178325 | 3300005564 | Bacteria | 1887 |
| 36 | Ga0068854_100002608 | 3300005578 | Bacteria | 11175 |
| 37 | Ga0068856_100004201 | 3300005614 | Bacteria | 14383 |
| 38 | Ga0068852_100005250 | 3300005616 | Bacteria | 9241 |
| 39 | Ga0081455_10103279 | 3300005937 | Bacteria | 2283 |
| 40 | Ga0081539_10000076 | 3300005985 | Bacteria | 229037 |
| 41 | Ga0081539_10018092 | 3300005985 | Bacteria | 4907 |
| 42 | Ga0070716_100055337 | 3300006173 | Bacteria | 2270 |
| 43 | Ga0070716_100104418 | 3300006173 | Bacteria | 1744 |
| 44 | Ga0070712_100059623 | 3300006175 | Bacteria | 2689 |
| 45 | Ga0105240_10036435 | 3300009093 | Bacteria | 6328 |
| 46 | Ga0105241_10016780 | 3300009174 | Bacteria | 5374 |
| 47 | Ga0105248_10017923 | 3300009177 | Bacteria | 7813 |
| 48 | Ga0105248_10087918 | 3300009177 | Bacteria | 3498 |
| 49 | Ga0105239_10668772 | 3300010375 | Bacteria | 1186 |
| 50 | Ga0157373_10050641 | 3300013100 | Bacteria | 2957 |
| 51 | Ga0157371_10002068 | 3300013102 | Bacteria | 19673 |
| 52 | Ga0157371_10088310 | 3300013102 | Bacteria | 2195 |
| 53 | Ga0157370_10020265 | 3300013104 | Bacteria | 6641 |
| 54 | Ga0157370_10047324 | 3300013104 | Bacteria | 4123 |
| 55 | Ga0157370_10243452 | 3300013104 | Bacteria | 1664 |
| 56 | Ga0157369_10000298 | 3300013105 | Bacteria | 66393 |
| 57 | Ga0157369_10004587 | 3300013105 | Bacteria | 16237 |
| 58 | Ga0157369_10005301 | 3300013105 | Bacteria | 15025 |
| 59 | Ga0157369_10071615 | 3300013105 | Bacteria | 3721 |
| 60 | Ga0157374_10001130 | 3300013296 | Bacteria | 22903 |
| 61 | Ga0157374_10092103 | 3300013296 | Bacteria | 2892 |
| 62 | Ga0157372_10001391 | 3300013307 | Bacteria | 26086 |
| 63 | Ga0163163_10062098 | 3300014325 | Bacteria | 3702 |
| 64 | Ga0206353_10659901 | 3300020082 | Bacteria | 2361 |
| 65 | Ga0213876_10058989 | 3300021384 | Bacteria | 2026 |
| 66 | Ga0213875_10007512 | 3300021388 | Bacteria | 5620 |
| 67 | Ga0213871_10000948 | 3300021441 | Bacteria | 4481 |
| 68 | Ga0207682_10000992 | 3300025893 | Bacteria | 13115 |
| 69 | Ga0207699_10255957 | 3300025906 | Bacteria | 1208 |
| 70 | Ga0207705_10000070 | 3300025909 | Bacteria | 130733 |
| 71 | Ga0207705_10000868 | 3300025909 | Bacteria | 24791 |
| 72 | Ga0207705_10002032 | 3300025909 | Bacteria | 15753 |
| 73 | Ga0207705_10036189 | 3300025909 | Bacteria | 3533 |
| 74 | Ga0207695_10004765 | 3300025913 | Bacteria | 18346 |
| 75 | Ga0207695_10005011 | 3300025913 | Bacteria | 17781 |
| 76 | Ga0207693_10005040 | 3300025915 | Bacteria | 11091 |
| 77 | Ga0207693_10038650 | 3300025915 | Bacteria | 3757 |
| 78 | Ga0207660_10000849 | 3300025917 | Bacteria | 20137 |
| 79 | Ga0207660_10070774 | 3300025917 | Bacteria | 2536 |
| 80 | Ga0207657_10000289 | 3300025919 | Bacteria | 53536 |
| 81 | Ga0207657_10003397 | 3300025919 | Bacteria | 17017 |
| 82 | Ga0207657_10010973 | 3300025919 | Bacteria | 9007 |
| 83 | Ga0207657_10011189 | 3300025919 | Bacteria | 8923 |
| 84 | Ga0207649_10000160 | 3300025920 | Bacteria | 54640 |
| 85 | Ga0207652_10000005 | 3300025921 | Bacteria | 343384 |
| 86 | Ga0207652_10000006 | 3300025921 | Bacteria | 302991 |
| 87 | Ga0207652_10000007 | 3300025921 | Bacteria | 301303 |
| 88 | Ga0207652_10000009 | 3300025921 | Bacteria | 257234 |
| 89 | Ga0207652_10002367 | 3300025921 | Bacteria | 15939 |
| 90 | Ga0207652_10131414 | 3300025921 | Bacteria | 2233 |
| 91 | Ga0207652_10172155 | 3300025921 | Bacteria | 1943 |
| 92 | Ga0207650_10008272 | 3300025925 | Bacteria | 7102 |
| 93 | Ga0207650_10077254 | 3300025925 | Bacteria | 2517 |
| 94 | Ga0207700_10010023 | 3300025928 | Bacteria | 5953 |
| 95 | Ga0207700_10040888 | 3300025928 | Bacteria | 3387 |
| 96 | Ga0207664_10021129 | 3300025929 | Bacteria | 4835 |
| 97 | Ga0207690_10000051 | 3300025932 | Bacteria | 107367 |
| 98 | Ga0207690_10003840 | 3300025932 | Bacteria | 8889 |
| 99 | Ga0207690_10011783 | 3300025932 | Bacteria | 5228 |
| 100 | Ga0207706_10001928 | 3300025933 | Bacteria | 20368 |
| 101 | Ga0207706_10021817 | 3300025933 | Bacteria | 5748 |
| 102 | Ga0207661_10254231 | 3300025944 | Bacteria | 1563 |
| 103 | Ga0207679_10064606 | 3300025945 | Bacteria | 2736 |
| 104 | Ga0207667_10004101 | 3300025949 | Bacteria | 17906 |
| 105 | Ga0207640_10000594 | 3300025981 | Bacteria | 21529 |
| 106 | Ga0207639_10101327 | 3300026041 | Bacteria | 2328 |
| 107 | Ga0207678_10005029 | 3300026067 | Bacteria | 11863 |
| 108 | Ga0207678_10020870 | 3300026067 | Bacteria | 5741 |
| 109 | Ga0207702_10015330 | 3300026078 | Bacteria | 6352 |
| 110 | Ga0207702_10015475 | 3300026078 | Bacteria | 6317 |
| 111 | Ga0207702_10022593 | 3300026078 | Bacteria | 5216 |
| 112 | Ga0207698_10001848 | 3300026142 | Bacteria | 12361 |
| 113 | Ga0207698_10037169 | 3300026142 | Bacteria | 3583 |
| 114 | Ga0268266_10000002 | 3300028379 | Bacteria | 3059047 |
| 115 | Ga0268266_10105399 | 3300028379 | Bacteria | 2491 |
| 116 | Ga0268266_10115738 | 3300028379 | Bacteria | 2381 |
| 117 | Ga0307408_100053283 | 3300031548 | Bacteria | 2920 |
| 118 | Ga0307405_10049431 | 3300031731 | Bacteria | 2599 |
| 119 | Ga0307413_10004446 | 3300031824 | Bacteria | 6102 |
| 120 | Ga0307410_10000926 | 3300031852 | Bacteria | 12543 |
| 121 | Ga0307410_10256425 | 3300031852 | Bacteria | 1362 |
| 122 | Ga0307406_10004070 | 3300031901 | Bacteria | 7959 |
| 123 | Ga0307406_10018497 | 3300031901 | Bacteria | 4073 |
| 124 | Ga0307409_100007103 | 3300031995 | Bacteria | 6665 |
| 125 | Ga0307416_100088072 | 3300032002 | Bacteria | 2653 |
| 126 | Ga0307416_100103022 | 3300032002 | Bacteria | 2490 |
| 127 | Ga0307416_100148705 | 3300032002 | Bacteria | 2144 |
| 128 | Ga0307414_10221561 | 3300032004 | Bacteria | 1553 |
| 129 | Ga0307411_10000293 | 3300032005 | Bacteria | 16705 |
| 130 | Ga0307411_10043680 | 3300032005 | Bacteria | 2869 |
| 131 | Ga0307415_100045330 | 3300032126 | Bacteria | 2947 |
| 132 | Ga0373923_0016935 | 3300035111 | Bacteria | 2779 |
| 133 | Ga0373936_0040737 | 3300035113 | Bacteria | 1862 |
| 134 | Ga0373953_0003586 | 3300035117 | Bacteria | 4855 |
| 135 | Ga0373957_0045574 | 3300035120 | Bacteria | 1662 |
| 136 | Ga0373946_0041060 | 3300035171 | Bacteria | 1896 |
| 137 | Ga0373935_0029542 | 3300035692 | Bacteria | 3393 |
| 138 | Ga0373935_0164957 | 3300035692 | Bacteria | 1512 |
| 139 | Ga0373927_0053749 | 3300035695 | Bacteria | 2606 |
| 140 | Ga0373933_0029722 | 3300035724 | Bacteria | 3161 |
| 141 | Ga0373937_0001046 | 3300036401 | Bacteria | 23385 |
| 142 | Ga0373937_0035123 | 3300036401 | Bacteria | 4560 |
| 143 | Ga0373925_0035115 | 3300037068 | Bacteria | 3698 |
| 144 | Ga0373925_0035360 | 3300037068 | Bacteria | 3685 |
| 145 | Ga0373925_0075420 | 3300037068 | Bacteria | 2555 |
| 146 | Ga0395899_0012107 | 3300037312 | Bacteria | 6605 |
| 147 | Ga0395899_0050578 | 3300037312 | Bacteria | 3085 |
| 148 | Ga0395900_0009928 | 3300037418 | Bacteria | 9746 |
| 149 | Ga0395898_0018617 | 3300037466 | Bacteria | 7079 |
| 150 | Ga0395898_0248205 | 3300037466 | Bacteria | 1697 |
| 151 | Ga0436364_0050114 | 3300037853 | Bacteria | 3589 |
| 152 | Ga0436364_1113025 | 3300037853 | Bacteria | 16575 |
| 153 | Ga0395901_0075902 | 3300038443 | Bacteria | 3506 |
| 154 | Ga0436365_0861535 | 3300039437 | Bacteria | 1265 |
| 155 | Ga0436365_1069212 | 3300039437 | Bacteria | 1210 |
| 156 | Ga0436365_1807801 | 3300039437 | Bacteria | 2459 |
| 157 | Ga0436360_0696484 | 3300039438 | Bacteria | 3126 |
| 158 | Ga0436360_0703100 | 3300039438 | Bacteria | 7518 |
| 159 | Ga0436362_1276357 | 3300039453 | Bacteria | 1761 |
| 160 | Ga0466969_0004200 | 3300044656 | Bacteria | 7644 |
| 161 | Ga0466966_0000027 | 3300044684 | Bacteria | 106520 |
| 162 | Ga0466966_0005297 | 3300044684 | Bacteria | 8480 |
| 163 | Ga0466961_0005451 | 3300044693 | Bacteria | 8023 |
| 164 | Ga0466963_0005868 | 3300044694 | Bacteria | 7236 |
| 165 | Ga0466971_0002248 | 3300044719 | Bacteria | 8170 |
| 166 | Ga0466970_0009403 | 3300044765 | Bacteria | 4940 |
| 167 | Ga0466957_0000189 | 3300044842 | Bacteria | 28184 |
| 168 | Ga0466959_0003340 | 3300045049 | Bacteria | 10484 |
| 169 | Ga0466959_0014024 | 3300045049 | Bacteria | 5817 |
| 170 | Ga0495592_0052281 | 3300046454 | Bacteria | 3034 |
| 171 | Ga0495664_0128983 | 3300046477 | Bacteria | 1531 |
| 172 | Ga0495606_0001872 | 3300046507 | Bacteria | 26385 |
| 173 | Ga0495608_0061325 | 3300046511 | Bacteria | 2473 |
| 174 | Ga0495642_0005980 | 3300046528 | Bacteria | 4670 |
| 175 | Ga0495645_0028245 | 3300046543 | Bacteria | 4076 |
| 176 | Ga0495667_0009594 | 3300046559 | Bacteria | 6563 |
| 177 | Ga0495646_0010137 | 3300046680 | Bacteria | 5991 |
| 178 | Ga0495600_0045708 | 3300046809 | Bacteria | 2857 |
| 179 | Ga0495680_0074447 | 3300047322 | Bacteria | 2579 |
| 180 | Ga0495680_0103821 | 3300047322 | Bacteria | 2115 |
| 181 | Ga0495675_0009287 | 3300047444 | Bacteria | 6117 |
| 182 | Ga0495684_0081242 | 3300047471 | Bacteria | 2460 |
| 183 | Ga0495602_0018368 | 3300048088 | Bacteria | 6988 |
| 184 | Ga0495602_0118734 | 3300048088 | Bacteria | 2132 |
| 185 | Ga0496102_0000043 | 3300048905 | Bacteria | 189201 |
| 186 | Ga0496103_0000086 | 3300048906 | Bacteria | 104765 |
| 187 | Ga0496114_0000021 | 3300048917 | Bacteria | 227038 |
| 188 | Ga0496116_0000089 | 3300048919 | Bacteria | 213129 |
| 189 | Ga0496116_0004889 | 3300048919 | Bacteria | 12638 |
| 190 | Ga0496117_0000104 | 3300048920 | Bacteria | 189201 |
| 191 | Ga0496117_0006329 | 3300048920 | Bacteria | 12046 |
| 192 | Ga0496118_0000080 | 3300048921 | Bacteria | 189201 |
| 193 | Ga0496118_0000525 | 3300048921 | Bacteria | 62968 |
| 194 | Ga0496124_0000093 | 3300048927 | Bacteria | 189201 |
| 195 | Ga0496124_0023999 | 3300048927 | Bacteria | 5552 |
| 196 | Ga0496125_0039047 | 3300048928 | Bacteria | 4096 |
| 197 | Ga0501290_001065 | 3300049513 | Bacteria | 3921 |
| 198 | Ga0501292_000074 | 3300049515 | Bacteria | 19994 |
| 199 | Ga0501294_002365 | 3300049517 | Bacteria | 1796 |
| 200 | Ga0501034_0021954 | 3300049571 | Bacteria | 6504 |
| 201 | Ga0501047_0207086 | 3300049581 | Bacteria | 1821 |
| 202 | Ga0501206_001847 | 3300049653 | Bacteria | 2660 |
| 203 | Ga0501223_000127 | 3300049663 | Bacteria | 21837 |
| 204 | Ga0501224_000043 | 3300049664 | Bacteria | 21738 |
| 205 | Ga0501224_012841 | 3300049664 | Bacteria | 1235 |
| 206 | Ga0501233_000546 | 3300049668 | Bacteria | 6077 |
| 207 | Ga0501235_001270 | 3300049669 | Bacteria | 5324 |
| 208 | Ga0501261_004712 | 3300049690 | Bacteria | 1696 |
| 209 | Ga0501225_0000535 | 3300049705 | Bacteria | 11884 |
| 210 | Ga0501279_000058 | 3300049775 | Bacteria | 20363 |
| 211 | Ga0501280_000122 | 3300049776 | Bacteria | 20266 |
| 212 | Ga0501281_00042 | 3300049777 | Bacteria | 14778 |
| 213 | Ga0501282_002808 | 3300049778 | Bacteria | 1886 |
| 214 | Ga0501035_0183257 | 3300049822 | Bacteria | 1803 |
| 215 | Ga0501044_0180777 | 3300049823 | Bacteria | 2076 |
| 216 | Ga0501226_000138 | 3300049853 | Bacteria | 14112 |
| 217 | Ga0495601_0012420 | 3300053077 | Bacteria | 5110 |
| 218 | Ga0495601_0031766 | 3300053077 | Bacteria | 3283 |
| 219 | Ga0495612_0006839 | 3300053078 | Bacteria | 4670 |
| 220 | Ga0495595_0008899 | 3300053084 | Bacteria | 4136 |
| 221 | Ga0495619_0048823 | 3300053085 | Bacteria | 2789 |
| 222 | Ga0500643_000089 | 3300053087 | Bacteria | 93982 |
| 223 | Ga0500573_0000019 | 3300053140 | Bacteria | 173601 |
| 224 | Ga0466962_0004503 | 3300061719 | Bacteria | 6681 |
| 225 | 2643949311 | 2643221588 | Bacteria | 3692460 |
| 226 | 2753763782 | 2751185897 | Bacteria | 5322941 |
| 227 | 2842776301 | 2842775625 | Bacteria | 5587290 |
| 228 | 2894772753 | 2894772417 | Bacteria | 5305674 |
| 229 | 2909401019 | 2909399089 | Bacteria | 3922598 |
| 230 | 2929203585 | 2929199973 | Bacteria | 7260745 |
| 231 | 641336220 | 641228493 | Bacteria | 3999591 |
| 232 | 643390021 | 643348555 | Bacteria | 3914947 |
| 233 | 8055911223 | 8055909800 | Bacteria | 7278581 |
| 234 | Ga0395900_0319183 | |||
| 235 | JGI25406J46586_10000221 | |||
| 236 | Ga0065707_10216254 | |||
| 237 | Ga0070670_100016525 | |||
| 238 | Ga0070677_10001096 | |||
| 239 | Ga0070680_100003430 | |||
| 240 | Ga0070682_100058414 | |||
| 241 | Ga0070660_100006115 | |||
| 242 | Ga0070660_100023747 | |||
| 243 | Ga0070661_100003178 | |||
| 244 | Ga0070661_100011466 | |||
| 245 | Ga0070661_100048409 | |||
| 246 | Ga0070659_100000001 | |||
| 247 | Ga0070659_100005856 | |||
| 248 | Ga0070709_10018462 | |||
| 249 | Ga0070709_10028350 | |||
| 250 | Ga0070714_100099652 | |||
| 251 | Ga0070713_100020559 | |||
| 252 | Ga0070710_10026220 | |||
| 253 | Ga0070710_10167457 | |||
| 254 | Ga0070663_100015465 | |||
| 255 | Ga0070662_100002114 | |||
| 256 | Ga0070662_100016916 | |||
| 257 | Ga0070681_10008301 | |||
| 258 | Ga0070681_10036214 | |||
| 259 | Ga0070679_100000005 | |||
| 260 | Ga0070679_100005269 | |||
| 261 | Ga0070679_100058566 | |||
| 262 | Ga0070679_100187088 | |||
| 263 | Ga0070684_100050812 | |||
| 264 | Ga0068853_100032254 | |||
| 265 | Ga0070665_100000086 | |||
| 266 | Ga0070665_100113921 | |||
| 267 | Ga0068855_100064438 | |||
| 268 | Ga0070664_100178325 | |||
| 269 | Ga0068854_100002608 | |||
| 270 | Ga0068856_100004201 | |||
| 271 | Ga0068852_100005250 | |||
| 272 | Ga0081455_10103279 | |||
| 273 | Ga0081539_10000076 | |||
| 274 | Ga0081539_10018092 | |||
| 275 | Ga0070716_100055337 | |||
| 276 | Ga0070716_100104418 | |||
| 277 | Ga0070712_100059623 | |||
| 278 | Ga0105240_10036435 | |||
| 279 | Ga0105241_10016780 | |||
| 280 | Ga0105248_10017923 | |||
| 281 | Ga0105248_10087918 | |||
| 282 | Ga0105239_10668772 | |||
| 283 | Ga0157373_10050641 | |||
| 284 | Ga0157371_10002068 | |||
| 285 | Ga0157371_10088310 | |||
| 286 | Ga0157370_10020265 | |||
| 287 | Ga0157370_10047324 | |||
| 288 | Ga0157370_10243452 | |||
| 289 | Ga0157369_10000298 | |||
| 290 | Ga0157369_10004587 | |||
| 291 | Ga0157369_10005301 | |||
| 292 | Ga0157369_10071615 | |||
| 293 | Ga0157374_10001130 | |||
| 294 | Ga0157374_10092103 | |||
| 295 | Ga0157372_10001391 | |||
| 296 | Ga0163163_10062098 | |||
| 297 | Ga0206353_10659901 | |||
| 298 | Ga0213876_10058989 | |||
| 299 | Ga0213875_10007512 | |||
| 300 | Ga0213871_10000948 | |||
| 301 | Ga0207682_10000992 | |||
| 302 | Ga0207699_10255957 | |||
| 303 | Ga0207705_10000070 | |||
| 304 | Ga0207705_10000868 | |||
| 305 | Ga0207705_10002032 | |||
| 306 | Ga0207705_10036189 | |||
| 307 | Ga0207695_10004765 | |||
| 308 | Ga0207695_10005011 | |||
| 309 | Ga0207693_10005040 | |||
| 310 | Ga0207693_10038650 | |||
| 311 | Ga0207660_10000849 | |||
| 312 | Ga0207660_10070774 | |||
| 313 | Ga0207657_10000289 | |||
| 314 | Ga0207657_10003397 | |||
| 315 | Ga0207657_10010973 | |||
| 316 | Ga0207657_10011189 | |||
| 317 | Ga0207649_10000160 | |||
| 318 | Ga0207652_10000005 | |||
| 319 | Ga0207652_10000006 | |||
| 320 | Ga0207652_10000007 | |||
| 321 | Ga0207652_10000009 | |||
| 322 | Ga0207652_10002367 | |||
| 323 | Ga0207652_10131414 | |||
| 324 | Ga0207652_10172155 | |||
| 325 | Ga0207650_10008272 | |||
| 326 | Ga0207650_10077254 | |||
| 327 | Ga0207700_10010023 | |||
| 328 | Ga0207700_10040888 | |||
| 329 | Ga0207664_10021129 | |||
| 330 | Ga0207690_10000051 | |||
| 331 | Ga0207690_10003840 | |||
| 332 | Ga0207690_10011783 | |||
| 333 | Ga0207706_10001928 | |||
| 334 | Ga0207706_10021817 | |||
| 335 | Ga0207661_10254231 | |||
| 336 | Ga0207679_10064606 | |||
| 337 | Ga0207667_10004101 | |||
| 338 | Ga0207640_10000594 | |||
| 339 | Ga0207639_10101327 | |||
| 340 | Ga0207678_10005029 | |||
| 341 | Ga0207678_10020870 | |||
| 342 | Ga0207702_10015330 | |||
| 343 | Ga0207702_10015475 | |||
| 344 | Ga0207702_10022593 | |||
| 345 | Ga0207698_10001848 | |||
| 346 | Ga0207698_10037169 | |||
| 347 | Ga0268266_10000002 | |||
| 348 | Ga0268266_10105399 | |||
| 349 | Ga0268266_10115738 | |||
| 350 | Ga0307408_100053283 | |||
| 351 | Ga0307405_10049431 | |||
| 352 | Ga0307413_10004446 | |||
| 353 | Ga0307410_10000926 | |||
| 354 | Ga0307410_10256425 | |||
| 355 | Ga0307406_10004070 | |||
| 356 | Ga0307406_10018497 | |||
| 357 | Ga0307409_100007103 | |||
| 358 | Ga0307416_100088072 | |||
| 359 | Ga0307416_100103022 | |||
| 360 | Ga0307416_100148705 | |||
| 361 | Ga0307414_10221561 | |||
| 362 | Ga0307411_10000293 | |||
| 363 | Ga0307411_10043680 | |||
| 364 | Ga0307415_100045330 | |||
| 365 | Ga0373923_0016935 | |||
| 366 | Ga0373936_0040737 | |||
| 367 | Ga0373953_0003586 | |||
| 368 | Ga0373957_0045574 | |||
| 369 | Ga0373946_0041060 | |||
| 370 | Ga0373935_0029542 | |||
| 371 | Ga0373935_0164957 | |||
| 372 | Ga0373927_0053749 | |||
| 373 | Ga0373933_0029722 | |||
| 374 | Ga0373937_0001046 | |||
| 375 | Ga0373937_0035123 | |||
| 376 | Ga0373925_0035115 | |||
| 377 | Ga0373925_0035360 | |||
| 378 | Ga0373925_0075420 | |||
| 379 | Ga0395899_0012107 | |||
| 380 | Ga0395899_0050578 | |||
| 381 | Ga0395900_0009928 | |||
| 382 | Ga0395898_0018617 | |||
| 383 | Ga0395898_0248205 | |||
| 384 | Ga0436364_0050114 | |||
| 385 | Ga0436364_1113025 | |||
| 386 | Ga0395901_0075902 | |||
| 387 | Ga0436365_0861535 | |||
| 388 | Ga0436365_1069212 | |||
| 389 | Ga0436365_1807801 | |||
| 390 | Ga0436360_0696484 | |||
| 391 | Ga0436360_0703100 | |||
| 392 | Ga0436362_1276357 | |||
| 393 | Ga0466969_0004200 | |||
| 394 | Ga0466966_0000027 | |||
| 395 | Ga0466966_0005297 | |||
| 396 | Ga0466961_0005451 | |||
| 397 | Ga0466963_0005868 | |||
| 398 | Ga0466971_0002248 | |||
| 399 | Ga0466970_0009403 | |||
| 400 | Ga0466957_0000189 | |||
| 401 | Ga0466959_0003340 | |||
| 402 | Ga0466959_0014024 | |||
| 403 | Ga0495592_0052281 | |||
| 404 | Ga0495664_0128983 | |||
| 405 | Ga0495606_0001872 | |||
| 406 | Ga0495608_0061325 | |||
| 407 | Ga0495642_0005980 | |||
| 408 | Ga0495645_0028245 | |||
| 409 | Ga0495667_0009594 | |||
| 410 | Ga0495646_0010137 | |||
| 411 | Ga0495600_0045708 | |||
| 412 | Ga0495680_0074447 | |||
| 413 | Ga0495680_0103821 | |||
| 414 | Ga0495675_0009287 | |||
| 415 | Ga0495684_0081242 | |||
| 416 | Ga0495602_0018368 | |||
| 417 | Ga0495602_0118734 | |||
| 418 | Ga0496102_0000043 | |||
| 419 | Ga0496103_0000086 | |||
| 420 | Ga0496114_0000021 | |||
| 421 | Ga0496116_0000089 | |||
| 422 | Ga0496116_0004889 | |||
| 423 | Ga0496117_0000104 | |||
| 424 | Ga0496117_0006329 | |||
| 425 | Ga0496118_0000080 | |||
| 426 | Ga0496118_0000525 | |||
| 427 | Ga0496124_0000093 | |||
| 428 | Ga0496124_0023999 | |||
| 429 | Ga0496125_0039047 | |||
| 430 | Ga0501290_001065 | |||
| 431 | Ga0501292_000074 | |||
| 432 | Ga0501294_002365 | |||
| 433 | Ga0501034_0021954 | |||
| 434 | Ga0501047_0207086 | |||
| 435 | Ga0501206_001847 | |||
| 436 | Ga0501223_000127 | |||
| 437 | Ga0501224_000043 | |||
| 438 | Ga0501224_012841 | |||
| 439 | Ga0501233_000546 | |||
| 440 | Ga0501235_001270 | |||
| 441 | Ga0501261_004712 | |||
| 442 | Ga0501225_0000535 | |||
| 443 | Ga0501279_000058 | |||
| 444 | Ga0501280_000122 | |||
| 445 | Ga0501281_00042 | |||
| 446 | Ga0501282_002808 | |||
| 447 | Ga0501035_0183257 | |||
| 448 | Ga0501044_0180777 | |||
| 449 | Ga0501226_000138 | |||
| 450 | Ga0495601_0012420 | |||
| 451 | Ga0495601_0031766 | |||
| 452 | Ga0495612_0006839 | |||
| 453 | Ga0495595_0008899 | |||
| 454 | Ga0495619_0048823 | |||
| 455 | Ga0500643_000089 | |||
| 456 | Ga0500573_0000019 | |||
| 457 | Ga0466962_0004503 | |||
| 458 | 2643949311 | |||
| 459 | 2753763782 | |||
| 460 | 2842776301 | |||
| 461 | 2894772753 | |||
| 462 | 2909401019 | |||
| 463 | 2929203585 | |||
| 464 | 641336220 | |||
| 465 | 643390021 | |||
| 466 | 8055911223 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6ei9-assembly2.cif.gz_B | crystal structure of e. coli trna-dihydrouridine synthase b (dusb) | 0.9465 | 16 | 335 |
| 1vhn-assembly1.cif.gz_A | crystal structure of a putative flavin oxidoreductase with flavin | 0.9297 | 28 | 337 |
| 6ei9-assembly2.cif.gz_B | crystal structure of e. coli trna-dihydrouridine synthase b (dusb) | 0.9256 | 16 | 335 |
| 1vhn-assembly1.cif.gz_A | crystal structure of a putative flavin oxidoreductase with flavin | 0.9181 | 28 | 337 |
| 4bfa-assembly1.cif.gz_A | crystal structure of e. coli dihydrouridine synthase c (dusc) | 0.8627 | 26 | 329 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0ABT5_6_247_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9499 | 24 | 264 | 3.20.20.70 |
| af_P0ABT5_6_247_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9385 | 24 | 264 | 3.20.20.70 |
| af_Q9VIS4_253_495_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9352 | 28 | 256 | 3.20.20.70 |
| af_P9WNS7_19_267_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9325 | 26 | 259 | 3.20.20.70 |
| 1vhnA01 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9242 | 28 | 267 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A354DK95-F1-model_v4 | tRNA dihydrouridine synthase DusB | 0.9798 | 170 | 308 |
GO:0003723
GO:0017150 |
| AF-A0A3M8BMD3-F1-model_v4 | tRNA dihydrouridine synthase DusB | 0.9793 | 139 | 264 |
GO:0003723
GO:0017150 |
| AF-A0A0C9NE04-F1-model_v4 | tRNA-dihydrouridine synthase (EC 1.3.1.-) | 0.9724 | 13 | 339 |
GO:0000049
GO:0017150 GO:0050660 |
| AF-A0A7W9AKT8-F1-model_v4 | tRNA-dihydrouridine synthase (EC 1.3.1.-) | 0.9711 | 14 | 336 |
GO:0000049
GO:0017150 GO:0050660 |
| AF-A0A5B8S6K6-F1-model_v4 | tRNA-dihydrouridine synthase (EC 1.3.1.-) | 0.9709 | 10 | 340 |
GO:0000049
GO:0017150 GO:0050660 |