F346591

General Info

Members Datasets Scaffolds Average Seq Length
233 168 203 853

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2600255067|2600809952
Length 900
Sequence VAIDASARTAAEAGEAPRACAVAAAHRAGPEAPDLSLWPVPLSEGWQCVSTPAGACATPGDLPRDGWLDAPVPGTVASAWRAAGRLDATLSAVFGVAALHGPLHGSLHNPLHNPLHSPLHSALRSSTPPPFAFDDHWYRLTLAGHGTERLRLHGLATLTEVWLDGALLLTSDSMFERHDLDVTLDGHATLALCFRALTPLLEARRTRARWRPRLVSPATLRNVRTTLLGHTPGWCPSVQPVGPWRPVERLAASPRAFDTVQLAPRLAGDDGVLALTLTFVKPQPASSEATLACAGAQAALAWRDPHTLEGTLRVPGVKRWWPHTHGTPALHEVTLHLDGTPVALGRVGFRAIEVDRGADGEGFALRVNGTPVFCRGACWTSADLATLAGTPAQLAHAFALARDAGMNMLRVGGTMVYESDAFYRLADEHGILIWQDFAFANFDYPRDDAFLASVQREATQFLERTQRFASLAVLCGGSEVDQQAAMFGLPPAMREQALFTEHLPALAAALRPDVPYVPNSPTGGTWPFSTRTGITHYYGVGAYQRPLDDVRRAQVRFAAECLAFANVPDDATLHAAGGMQPYDARWKAAVPRDAGAGWDFDDVREHYLRTLYGVDPARLRYEDAARYLELSRALVAELMTDVFAEWRRHGSPCGGALVWQFQDLQPGAGWGVIDSTGRPKSAWHALASALRPVQIAITDEGLNGLDLHVVNETERPLHARLALVCLRDGSVRVAAGEQMLDVPARGTLRVEAAACLGQFFDFTHAYRFGPPSHDVTIATLTDAASGEVLAEAFHLPDRSPAPRYDPGLTVTPVQSPDGWQLVIETQRFARFVHVIDAHYRAACDWFHLAPGSRRVVDLVPLSACASIDPPSPTPLCTKDTATAPAGEVRAINAPTPVFYG

Samples

Sample ID Description Type Environment
1 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
2 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
3 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
4 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
5 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
6 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
7 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
8 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
9 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
10 2643221719 Rhizobium sp. Root274 Isolate Unclassified
11 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
12 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
13 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
14 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
15 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
16 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
17 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
18 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
19 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
20 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
21 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
22 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
23 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
24 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
25 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
26 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
27 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
28 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
29 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
30 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
31 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
32 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
33 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
34 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
35 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
36 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
37 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
38 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
39 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
40 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
41 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
42 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
43 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
44 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
52 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
62 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
97 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
103 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
104 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
108 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
125 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
126 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
127 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
130 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
141 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
144 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
165 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
166 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
167 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
168 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.12
Metatranscriptomes 0
Isolates 12.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.88
Nodule 5.58
Rhizoplane 0.43
Rhizosphere 60.52
Stem 0
Stem Tuber 0
Unclassified 14.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000771 3300002705 Bacteria 16645
2 JGI25151J46595_10001323 3300003187 Bacteria 17324
3 JGI25151J46595_10001367 3300003187 Bacteria 16881
4 rootH1_10087432 3300003323 Bacteria 9112
5 Ga0055533_1000310 3300003756 Bacteria 23601
6 Ga0055532_1000001 3300003758 Bacteria 1119836
7 Ga0055527_1000002 3300003760 Bacteria 830488
8 Ga0055535_1000001 3300003761 Bacteria 1119836
9 Ga0055542_1000001 3300003762 Bacteria 1119836
10 Ga0055529_1000026 3300003763 Bacteria 293254
11 Ga0055526_1002861 3300003771 Bacteria 11372
12 Ga0055526_1005812 3300003771 Bacteria 6939
13 Ga0055536_1000163 3300003781 Bacteria 56770
14 Ga0055534_1000664 3300003784 Bacteria 17306
15 Ga0065707_10081979 3300005295 Bacteria 26394
16 Ga0068868_100012017 3300005338 Bacteria 6320
17 Ga0070689_100030778 3300005340 Bacteria 4075
18 Ga0070688_100003206 3300005365 Bacteria 8381
19 Ga0070667_100000032 3300005367 Bacteria 176783
20 Ga0070667_100000129 3300005367 Bacteria 95291
21 Ga0068855_100035004 3300005563 Bacteria 5985
22 Ga0068863_100089183 3300005841 Bacteria 2924
23 Ga0081455_10016403 3300005937 Bacteria 7153
24 Ga0075365_10003832 3300006038 Bacteria 7847
25 Ga0075366_10006192 3300006195 Bacteria 6530
26 Ga0075370_10001522 3300006353 Bacteria 10132
27 Ga0075370_10005221 3300006353 Bacteria 6425
28 Ga0099826_10000009 3300006948 Bacteria 336081
29 Ga0105251_10015665 3300009011 Bacteria 4131
30 Ga0111539_10022900 3300009094 Bacteria 7671
31 Ga0105245_10000382 3300009098 Bacteria 41169
32 Ga0105241_10011024 3300009174 Bacteria 6630
33 Ga0105248_10010163 3300009177 Bacteria 10365
34 Ga0105248_10014004 3300009177 Bacteria 8824
35 Ga0105237_10004128 3300009545 Bacteria 16930
36 Ga0105249_10000507 3300009553 Bacteria 36026
37 Ga0157370_10006298 3300013104 Bacteria 13123
38 Ga0157377_10022508 3300014745 Bacteria 3328
39 Ga0183361_10013 3300016635 Bacteria 179680
40 Ga0209674_100005 3300025226 Bacteria 1708125
41 Ga0209674_100113 3300025226 Bacteria 139708
42 Ga0209672_100001 3300025228 Bacteria 2828210
43 Ga0209147_100001 3300025229 Bacteria 2384371
44 Ga0209563_100432 3300025230 Bacteria 14506
45 Ga0209258_100001 3300025242 Bacteria 2384269
46 Ga0209148_1000003 3300025254 Bacteria 2384288
47 Ga0209759_1000029 3300025256 Bacteria 286968
48 Ga0209759_1000232 3300025256 Bacteria 83288
49 Ga0209759_1000322 3300025256 Bacteria 63168
50 Ga0209233_1000043 3300025261 Bacteria 509723
51 Ga0209565_1000196 3300025263 Bacteria 72238
52 Ga0209455_1000001 3300025272 Bacteria 2384278
53 Ga0209675_1000092 3300025291 Bacteria 144839
54 Ga0209676_1000480 3300025292 Bacteria 65842
55 Ga0209025_1000222 3300025294 Bacteria 135688
56 Ga0209025_1000628 3300025294 Bacteria 62542
57 Ga0209025_1003639 3300025294 Bacteria 14313
58 Ga0209564_1000848 3300025295 Bacteria 40926
59 Ga0209564_1000882 3300025295 Bacteria 39680
60 Ga0209564_1001620 3300025295 Bacteria 21837
61 Ga0209256_1001668 3300025299 Bacteria 21570
62 Ga0209256_1003067 3300025299 Bacteria 12288
63 Ga0209051_1003590 3300025303 Bacteria 10087
64 Ga0207680_10019726 3300025903 Bacteria 3612
65 Ga0207694_10055912 3300025924 Bacteria 3064
66 Ga0207687_10000250 3300025927 Bacteria 36357
67 Ga0207711_10054923 3300025941 Unclassified 3419
68 Ga0207651_10022631 3300025960 Bacteria 3848
69 Ga0207712_10000249 3300025961 Bacteria 52766
70 Ga0207658_10000048 3300025986 Bacteria 130723
71 Ga0207658_10000126 3300025986 Bacteria 83451
72 Ga0207677_10025377 3300026023 Bacteria 3697
73 Ga0209282_1000057 3300027666 Bacteria 99758
74 Ga0265338_10011169 3300028800 Bacteria 10410
75 Ga0265328_10007994 3300031239 Bacteria 4385
76 Ga0307509_10000365 3300031507 Bacteria 76187
77 Ga0307408_100001629 3300031548 Bacteria 16615
78 Ga0451577_0017837 3300042876 Bacteria 6548
79 Ga0451576_0001766 3300045051 Bacteria 35473
80 Ga0451576_0020802 3300045051 Bacteria 7142
81 Ga0451576_0135421 3300045051 Bacteria 2568
82 Ga0495592_0003520 3300046454 Bacteria 11238
83 Ga0495592_0004591 3300046454 Bacteria 10110
84 Ga0495629_0000098 3300046459 Bacteria 75959
85 Ga0495629_0001298 3300046459 Bacteria 19632
86 Ga0495629_0004280 3300046459 Bacteria 10703
87 Ga0495629_0004773 3300046459 Bacteria 10162
88 Ga0495629_0012176 3300046459 Bacteria 6232
89 Ga0495638_0003742 3300046460 Bacteria 11837
90 Ga0495651_0003504 3300046462 Bacteria 12036
91 Ga0495653_0000664 3300046463 Bacteria 26267
92 Ga0495650_0003210 3300046471 Bacteria 12158
93 Ga0495580_0000490 3300046472 Bacteria 33087
94 Ga0495580_0000969 3300046472 Bacteria 25168
95 Ga0495580_0001076 3300046472 Bacteria 23993
96 Ga0495580_0005713 3300046472 Bacteria 10231
97 Ga0495582_0002979 3300046473 Bacteria 9487
98 Ga0495664_0000550 3300046477 Bacteria 18873
99 Ga0495664_0019581 3300046477 Bacteria 3893
100 Ga0495596_0000038 3300046500 Bacteria 95273
101 Ga0495583_0000002 3300046506 Bacteria 782521
102 Ga0495606_0012919 3300046507 Bacteria 6646
103 Ga0495608_0000558 3300046511 Bacteria 25667
104 Ga0495610_0000141 3300046512 Bacteria 79877
105 Ga0495616_0000939 3300046513 Bacteria 20952
106 Ga0495618_0002353 3300046514 Bacteria 12194
107 Ga0495628_0001107 3300046516 Bacteria 24617
108 Ga0495628_0002692 3300046516 Bacteria 15896
109 Ga0495630_0005456 3300046517 Bacteria 8983
110 Ga0495630_0007931 3300046517 Bacteria 7617
111 Ga0495643_0023011 3300046522 Bacteria 3547
112 Ga0495648_0007878 3300046524 Bacteria 8466
113 Ga0495648_0008172 3300046524 Bacteria 8258
114 Ga0495648_0054319 3300046524 Bacteria 2420
115 Ga0495666_0000428 3300046526 Bacteria 18644
116 Ga0495666_0001264 3300046526 Bacteria 12266
117 Ga0495666_0006093 3300046526 Bacteria 6069
118 Ga0495666_0018103 3300046526 Bacteria 3509
119 Ga0495665_0003010 3300046531 Bacteria 9109
120 Ga0495640_0012448 3300046533 Bacteria 6498
121 Ga0495586_0007471 3300046535 Bacteria 5831
122 Ga0495587_0005537 3300046536 Bacteria 8239
123 Ga0495609_0000439 3300046538 Bacteria 34416
124 Ga0495645_0000756 3300046543 Bacteria 22106
125 Ga0495622_0000161 3300046557 Bacteria 56444
126 Ga0495667_0015236 3300046559 Bacteria 5191
127 Ga0495634_0004792 3300046642 Bacteria 10514
128 Ga0495634_0050435 3300046642 Bacteria 2795
129 Ga0495625_0004137 3300046660 Bacteria 13846
130 Ga0495635_0009648 3300046663 Bacteria 6748
131 Ga0495635_0010076 3300046663 Bacteria 6608
132 Ga0495635_0013078 3300046663 Bacteria 5811
133 Ga0495661_0002638 3300046665 Bacteria 13722
134 Ga0495623_0032155 3300046679 Bacteria 3372
135 Ga0495646_0001002 3300046680 Bacteria 16288
136 Ga0495646_0005090 3300046680 Bacteria 8284
137 Ga0495613_0003073 3300046689 Bacteria 12462
138 Ga0495613_0005434 3300046689 Bacteria 9570
139 Ga0495624_0004735 3300046690 Bacteria 9903
140 Ga0495671_0000384 3300046692 Bacteria 36397
141 Ga0495649_0000321 3300046694 Bacteria 41688
142 Ga0495649_0001997 3300046694 Bacteria 14802
143 Ga0495589_0001933 3300046794 Bacteria 11735
144 Ga0495600_0001698 3300046809 Bacteria 12297
145 Ga0495600_0004085 3300046809 Bacteria 8683
146 Ga0495581_0000613 3300047315 Bacteria 18708
147 Ga0495604_0001238 3300047317 Bacteria 20929
148 Ga0495604_0001343 3300047317 Bacteria 20125
149 Ga0495604_0007735 3300047317 Bacteria 8513
150 Ga0495604_0008437 3300047317 Bacteria 8136
151 Ga0495674_0007969 3300047319 Bacteria 10111
152 Ga0495674_0021540 3300047319 Bacteria 5960
153 Ga0495672_0004580 3300047320 Bacteria 11238
154 Ga0495676_0001748 3300047321 Bacteria 18977
155 Ga0495676_0010086 3300047321 Bacteria 8578
156 Ga0495680_0001011 3300047322 Bacteria 31241
157 Ga0495680_0032119 3300047322 Bacteria 4265
158 Ga0495683_0000839 3300047323 Bacteria 21870
159 Ga0495683_0002799 3300047323 Bacteria 10351
160 Ga0495687_013516 3300047443 Bacteria 4256
161 Ga0495675_0001924 3300047444 Bacteria 12374
162 Ga0495675_0003628 3300047444 Bacteria 9315
163 Ga0495679_000025 3300047446 Bacteria 198386
164 Ga0495673_0008466 3300047469 Bacteria 5782
165 Ga0495686_0007756 3300047472 Bacteria 7996
166 Ga0495602_0039284 3300048088 Bacteria 4360
167 Ga0495602_0051509 3300048088 Bacteria 3665
168 Ga0495614_0000609 3300048089 Bacteria 15016
169 Ga0495614_0022838 3300048089 Bacteria 2696
170 Ga0496103_0002433 3300048906 Bacteria 11714
171 Ga0496116_0002199 3300048919 Bacteria 20771
172 Ga0496117_0000696 3300048920 Bacteria 53473
173 Ga0496117_0007510 3300048920 Bacteria 10631
174 Ga0496117_0010895 3300048920 Bacteria 8198
175 Ga0496118_0001933 3300048921 Bacteria 29376
176 Ga0496118_0013086 3300048921 Bacteria 7884
177 Ga0496122_0000178 3300048925 Bacteria 150162
178 Ga0496122_0000676 3300048925 Bacteria 68538
179 Ga0496123_0000559 3300048926 Bacteria 63800
180 Ga0496123_0000714 3300048926 Bacteria 54234
181 Ga0496126_0000278 3300048929 Bacteria 107983
182 Ga0496126_0000374 3300048929 Bacteria 92435
183 Ga0501037_0015183 3300049573 Bacteria 5667
184 Ga0501047_0031538 3300049581 Bacteria 5111
185 Ga0501070_0004086 3300049586 Bacteria 12547
186 Ga0501070_0006595 3300049586 Bacteria 9880
187 Ga0501070_0024720 3300049586 Bacteria 5038
188 Ga0501070_0045946 3300049586 Bacteria 3631
189 Ga0501074_0003069 3300049590 Bacteria 11777
190 Ga0501074_0003784 3300049590 Bacteria 10749
191 Ga0501080_0036320 3300049742 Bacteria 4600
192 Ga0501080_0036453 3300049742 Bacteria 4590
193 Ga0501080_0057867 3300049742 Bacteria 3608
194 Ga0501035_0002302 3300049822 Bacteria 18838
195 Ga0501035_0053283 3300049822 Bacteria 3618
196 Ga0501044_0053810 3300049823 Bacteria 4140
197 nmdc:mga0yw44_22397_c1 3300050492 Bacteria 3543
198 nmdc:mga0k408_134_c1 3300050493 Bacteria 27880
199 nmdc:mga0k408_6108_c1 3300050493 Bacteria 6417
200 nmdc:mga0k408_951_c1 3300050493 Bacteria 9458
201 nmdc:mga07m45_1910_c1 3300050496 Bacteria 9619
202 nmdc:mga07m45_5351_c1 3300050496 Bacteria 6391
203 Ga0500637_0019215 3300053178 Bacteria 3682

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025903 Ga0207680_10019726 Ga0207680_100197261 729
2 3300046477 Ga0495664_0019581 Ga0495664_0019581_1660_3870 733
3 3300046524 Ga0495648_0054319 Ga0495648_0054319_135_2408 757
4 3300045051 Ga0451576_0135421 Ga0451576_0135421_60_2540 758
5 iso_pu_bacteria 2897803580 2897807646 763
6 3300049586 Ga0501070_0006595 Ga0501070_0006595_7496_9856 767
7 3300049581 Ga0501047_0031538 Ga0501047_0031538_2552_4951 777
8 3300049586 Ga0501070_0024720 Ga0501070_0024720_2380_4779 777
9 3300013104 Ga0157370_10006298 Ga0157370_100062987 779
10 3300025924 Ga0207694_10055912 Ga0207694_100559122 779
11 3300046522 Ga0495643_0023011 Ga0495643_0023011_1080_3485 780
12 3300042876 Ga0451577_0017837 Ga0451577_0017837_2627_5035 782
13 3300045051 Ga0451576_0001766 Ga0451576_0001766_25596_28004 782
14 3300053178 Ga0500637_0019215 Ga0500637_0019215_1081_3609 783
15 3300005937 Ga0081455_10016403 Ga0081455_100164037 787
16 3300049573 Ga0501037_0015183 Ga0501037_0015183_2210_4834 787
17 iso_pu_bacteria 2891088606 2891089042 791
18 3300028800 Ga0265338_10011169 Ga0265338_100111692 792
19 3300045051 Ga0451576_0020802 Ga0451576_0020802_3176_5668 792
20 3300003323 rootH1_10087432 rootH1_100874324 797
21 3300005340 Ga0070689_100030778 Ga0070689_1000307782 797
22 3300005365 Ga0070688_100003206 Ga0070688_1000032065 797
23 3300014745 Ga0157377_10022508 Ga0157377_100225082 797
24 3300025960 Ga0207651_10022631 Ga0207651_100226313 797
25 3300049586 Ga0501070_0004086 Ga0501070_0004086_7789_10254 798
26 3300049586 Ga0501070_0045946 Ga0501070_0045946_208_2673 798
27 3300049590 Ga0501074_0003069 Ga0501074_0003069_7410_9875 798
28 3300049590 Ga0501074_0003784 Ga0501074_0003784_4729_7194 798
29 3300049742 Ga0501080_0036320 Ga0501080_0036320_134_2599 798
30 3300049742 Ga0501080_0036453 Ga0501080_0036453_1992_4457 798
31 3300049742 Ga0501080_0057867 Ga0501080_0057867_55_2520 798
32 3300049822 Ga0501035_0002302 Ga0501035_0002302_13065_15530 798
33 3300049822 Ga0501035_0053283 Ga0501035_0053283_271_2736 798
34 3300049823 Ga0501044_0053810 Ga0501044_0053810_813_3278 798
35 3300009098 Ga0105245_10000382 Ga0105245_1000038221 799
36 3300025927 Ga0207687_10000250 Ga0207687_1000025028 799
37 iso_pu_bacteria 2904615490 2904619638 799
38 3300005295 Ga0065707_10081979 Ga0065707_1008197918 800
39 3300046506 Ga0495583_0000002 Ga0495583_0000002_441810_444245 800
40 3300005367 Ga0070667_100000032 Ga0070667_100000032126 802
41 3300009177 Ga0105248_10014004 Ga0105248_100140042 802
42 3300009545 Ga0105237_10004128 Ga0105237_1000412815 802
43 3300009553 Ga0105249_10000507 Ga0105249_1000050721 802
44 3300025961 Ga0207712_10000249 Ga0207712_1000024922 802
45 3300025986 Ga0207658_10000048 Ga0207658_1000004812 802
46 3300048925 Ga0496122_0000178 Ga0496122_0000178_65688_68168 802
47 3300048926 Ga0496123_0000559 Ga0496123_0000559_2799_5279 802
48 3300050493 nmdc:mga0k408_134_c1 nmdc:mga0k408_134_c1_8286_10841 803
49 3300005367 Ga0070667_100000129 Ga0070667_10000012956 804
50 3300025986 Ga0207658_10000126 Ga0207658_1000012612 804
51 3300031239 Ga0265328_10007994 Ga0265328_100079942 804
52 3300005563 Ga0068855_100035004 Ga0068855_1000350043 806
53 iso_pu_bacteria 2643221653 2644300457 806
54 iso_pu_bacteria 2643221719 2644658798 806
55 iso_pu_bacteria 2818991272 2819243437 806
56 iso_pu_bacteria 2989776772 2989781011 806
57 iso_pu_bacteria 8005246636 8005251490 806
58 3300009174 Ga0105241_10011024 Ga0105241_100110244 807
59 3300046663 Ga0495635_0013078 Ga0495635_0013078_3334_5769 808
60 3300046679 Ga0495623_0032155 Ga0495623_0032155_883_3318 808
61 3300005338 Ga0068868_100012017 Ga0068868_1000120175 809
62 3300005841 Ga0068863_100089183 Ga0068863_1000891831 809
63 3300006038 Ga0075365_10003832 Ga0075365_100038323 809
64 3300006353 Ga0075370_10001522 Ga0075370_100015223 809
65 3300026023 Ga0207677_10025377 Ga0207677_100253774 809
66 3300046660 Ga0495625_0004137 Ga0495625_0004137_805_3363 809
67 3300050492 nmdc:mga0yw44_22397_c1 nmdc:mga0yw44_22397_c1_182_2734 809
68 3300050493 nmdc:mga0k408_951_c1 nmdc:mga0k408_951_c1_966_3518 809
69 3300050496 nmdc:mga07m45_1910_c1 nmdc:mga07m45_1910_c1_3655_6207 809
70 3300006195 Ga0075366_10006192 Ga0075366_100061926 810
71 3300006353 Ga0075370_10005221 Ga0075370_100052216 810
72 3300050493 nmdc:mga0k408_6108_c1 nmdc:mga0k408_6108_c1_3540_6080 810
73 3300050496 nmdc:mga07m45_5351_c1 nmdc:mga07m45_5351_c1_311_2851 810
74 3300009094 Ga0111539_10022900 Ga0111539_100229004 815
75 3300031507 Ga0307509_10000365 Ga0307509_1000036558 815
76 iso_pu_bacteria 2834641062 2834645918 817
77 3300047472 Ga0495686_0007756 Ga0495686_0007756_60_2627 818
78 3300048920 Ga0496117_0000696 Ga0496117_0000696_38079_40607 819
79 3300048921 Ga0496118_0013086 Ga0496118_0013086_1353_3881 819
80 3300048929 Ga0496126_0000374 Ga0496126_0000374_65556_68084 819
81 3300006948 Ga0099826_10000009 Ga0099826_100000099 820
82 3300027666 Ga0209282_1000057 Ga0209282_100005723 820
83 3300009177 Ga0105248_10010163 Ga0105248_100101632 821
84 3300025941 Ga0207711_10054923 Ga0207711_100549232 821
85 3300003187 JGI25151J46595_10001323 JGI25151J46595_100013234 824
86 3300003187 JGI25151J46595_10001367 JGI25151J46595_100013675 824
87 3300003771 Ga0055526_1002861 Ga0055526_100286111 824
88 3300003771 Ga0055526_1005812 Ga0055526_10058122 824
89 3300003781 Ga0055536_1000163 Ga0055536_100016345 824
90 3300003784 Ga0055534_1000664 Ga0055534_10006646 824
91 3300009011 Ga0105251_10015665 Ga0105251_100156652 824
92 3300025263 Ga0209565_1000196 Ga0209565_100019659 824
93 3300025291 Ga0209675_1000092 Ga0209675_1000092119 824
94 3300025292 Ga0209676_1000480 Ga0209676_100048012 824
95 3300025294 Ga0209025_1000222 Ga0209025_100022211 824
96 3300025294 Ga0209025_1000628 Ga0209025_100062846 824
97 3300025294 Ga0209025_1003639 Ga0209025_10036394 824
98 3300025295 Ga0209564_1000848 Ga0209564_100084812 824
99 3300025295 Ga0209564_1000882 Ga0209564_100088221 824
100 3300025295 Ga0209564_1001620 Ga0209564_100162011 824
101 3300025299 Ga0209256_1001668 Ga0209256_100166811 824
102 3300025299 Ga0209256_1003067 Ga0209256_100306711 824
103 3300025303 Ga0209051_1003590 Ga0209051_10035906 824
104 3300046500 Ga0495596_0000038 Ga0495596_0000038_27162_29711 824
105 3300046512 Ga0495610_0000141 Ga0495610_0000141_16960_19509 824
106 3300046513 Ga0495616_0000939 Ga0495616_0000939_7040_9589 824
107 3300046524 Ga0495648_0007878 Ga0495648_0007878_3972_6521 824
108 3300046538 Ga0495609_0000439 Ga0495609_0000439_8681_11230 824
109 3300046692 Ga0495671_0000384 Ga0495671_0000384_4864_7413 824
110 3300046694 Ga0495649_0001997 Ga0495649_0001997_1523_4072 824
111 3300047320 Ga0495672_0004580 Ga0495672_0004580_1374_3923 824
112 3300048919 Ga0496116_0002199 Ga0496116_0002199_6337_8886 824
113 3300048925 Ga0496122_0000676 Ga0496122_0000676_48900_51449 824
114 3300048926 Ga0496123_0000714 Ga0496123_0000714_16782_19331 824
115 3300046472 Ga0495580_0005713 Ga0495580_0005713_1550_4093 828
116 3300047317 Ga0495604_0001238 Ga0495604_0001238_3840_6383 828
117 iso_pu_bacteria 2510917013 2511089343 831
118 iso_pu_bacteria 2842324504 2842327431 831
119 iso_pu_bacteria 2842348783 2842351962 831
120 iso_pu_bacteria 2842454564 2842458157 831
121 3300031548 Ga0307408_100001629 Ga0307408_10000162916 832
122 3300046471 Ga0495650_0003210 Ga0495650_0003210_7451_9949 832
123 3300016635 Ga0183361_10013 Ga0183361_10013143 837
124 3300048089 Ga0495614_0022838 Ga0495614_0022838_64_2595 838
125 iso_pu_bacteria 2600255067 2600809952 839
126 iso_pu_bacteria 2513237151 2513961013 840
127 3300025256 Ga0209759_1000232 Ga0209759_100023223 851
128 3300046557 Ga0495622_0000161 Ga0495622_0000161_44738_47425 852
129 3300003758 Ga0055532_1000001 Ga0055532_100000185 854
130 3300003760 Ga0055527_1000002 Ga0055527_1000002673 854
131 3300003761 Ga0055535_1000001 Ga0055535_1000001918 854
132 3300003762 Ga0055542_1000001 Ga0055542_100000185 854
133 3300003763 Ga0055529_1000026 Ga0055529_1000026198 854
134 3300025228 Ga0209672_100001 Ga0209672_100001916 854
135 3300025229 Ga0209147_100001 Ga0209147_100001916 854
136 3300025242 Ga0209258_100001 Ga0209258_100001916 854
137 3300025254 Ga0209148_1000003 Ga0209148_1000003916 854
138 3300025256 Ga0209759_1000029 Ga0209759_100002968 854
139 3300025261 Ga0209233_1000043 Ga0209233_1000043338 854
140 3300025272 Ga0209455_1000001 Ga0209455_1000001916 854
141 3300046507 Ga0495606_0012919 Ga0495606_0012919_1839_4520 854
142 3300046694 Ga0495649_0000321 Ga0495649_0000321_26684_29365 854
143 3300047323 Ga0495683_0000839 Ga0495683_0000839_5420_8101 854
144 3300047443 Ga0495687_013516 Ga0495687_013516_854_3535 854
145 iso_pu_bacteria 2904483920 2904484831 854
146 iso_pu_bacteria 2919527303 2919530556 854
147 3300047317 Ga0495604_0001343 Ga0495604_0001343_5154_7784 856
148 3300048088 Ga0495602_0051509 Ga0495602_0051509_108_2738 856
149 iso_pu_bacteria 2900634093 2900635159 856
150 iso_pu_bacteria 2512047030 2512346380 857
151 iso_pu_bacteria 2885270888 2885278871 857
152 iso_pu_bacteria 2902682994 2902689598 857
153 3300003756 Ga0055533_1000310 Ga0055533_100031012 858
154 3300025226 Ga0209674_100005 Ga0209674_100005451 858
155 3300025230 Ga0209563_100432 Ga0209563_1004322 858
156 3300046454 Ga0495592_0004591 Ga0495592_0004591_1528_4113 858
157 3300046459 Ga0495629_0004773 Ga0495629_0004773_5811_8396 858
158 3300046514 Ga0495618_0002353 Ga0495618_0002353_1533_4118 858
159 3300046526 Ga0495666_0006093 Ga0495666_0006093_16_2601 858
160 3300046559 Ga0495667_0015236 Ga0495667_0015236_1241_3826 858
161 3300046663 Ga0495635_0009648 Ga0495635_0009648_2516_5101 858
162 3300046809 Ga0495600_0001698 Ga0495600_0001698_2030_4615 858
163 3300047321 Ga0495676_0010086 Ga0495676_0010086_1435_4020 858
164 3300047322 Ga0495680_0032119 Ga0495680_0032119_1435_4020 858
165 3300047444 Ga0495675_0001924 Ga0495675_0001924_1418_4003 858
166 3300048089 Ga0495614_0000609 Ga0495614_0000609_7257_9842 858
167 iso_pu_bacteria 2510065045 2510250799 859
168 iso_pu_bacteria 2718217991 2719639937 859
169 iso_pu_bacteria 2515154122 2515679753 861
170 3300046665 Ga0495661_0002638 Ga0495661_0002638_677_3316 863
171 3300046472 Ga0495580_0000969 Ga0495580_0000969_21674_24298 864
172 iso_pu_bacteria 642555113 642621276 864
173 3300048929 Ga0496126_0000278 Ga0496126_0000278_54418_57045 866
174 iso_pu_bacteria 2744054900 2746089554 866
175 iso_pu_bacteria 2744054901 2746098413 866
176 3300046459 Ga0495629_0001298 Ga0495629_0001298_7231_9882 867
177 3300046472 Ga0495580_0000490 Ga0495580_0000490_18296_20947 867
178 3300046473 Ga0495582_0002979 Ga0495582_0002979_6072_8723 867
179 3300046477 Ga0495664_0000550 Ga0495664_0000550_6687_9338 867
180 3300046516 Ga0495628_0002692 Ga0495628_0002692_1925_4576 867
181 3300046517 Ga0495630_0005456 Ga0495630_0005456_6269_8920 867
182 3300046524 Ga0495648_0008172 Ga0495648_0008172_5385_8036 867
183 3300046526 Ga0495666_0000428 Ga0495666_0000428_5229_7880 867
184 3300046533 Ga0495640_0012448 Ga0495640_0012448_2933_5584 867
185 3300046535 Ga0495586_0007471 Ga0495586_0007471_2841_5492 867
186 3300046543 Ga0495645_0000756 Ga0495645_0000756_13282_15933 867
187 3300046642 Ga0495634_0004792 Ga0495634_0004792_535_3186 867
188 3300046680 Ga0495646_0005090 Ga0495646_0005090_5059_7710 867
189 3300046689 Ga0495613_0003073 Ga0495613_0003073_329_2980 867
190 3300047315 Ga0495581_0000613 Ga0495581_0000613_6462_9113 867
191 3300047317 Ga0495604_0007735 Ga0495604_0007735_5641_8292 867
192 3300047319 Ga0495674_0021540 Ga0495674_0021540_223_2874 867
193 3300047321 Ga0495676_0001748 Ga0495676_0001748_6974_9625 867
194 3300047322 Ga0495680_0001011 Ga0495680_0001011_19148_21799 867
195 3300046459 Ga0495629_0000098 Ga0495629_0000098_61417_64041 868
196 3300046460 Ga0495638_0003742 Ga0495638_0003742_1017_3641 868
197 3300046463 Ga0495653_0000664 Ga0495653_0000664_10273_12897 868
198 3300046472 Ga0495580_0001076 Ga0495580_0001076_20801_23437 868
199 3300046516 Ga0495628_0001107 Ga0495628_0001107_12060_14684 868
200 3300046517 Ga0495630_0007931 Ga0495630_0007931_869_3493 868
201 3300046526 Ga0495666_0018103 Ga0495666_0018103_477_3113 868
202 3300046642 Ga0495634_0050435 Ga0495634_0050435_144_2768 868
203 3300046680 Ga0495646_0001002 Ga0495646_0001002_7553_10177 868
204 3300046690 Ga0495624_0004735 Ga0495624_0004735_4657_7293 868
205 3300047319 Ga0495674_0007969 Ga0495674_0007969_6043_8667 868
206 3300047446 Ga0495679_000025 Ga0495679_000025_114461_117085 868
207 3300048920 Ga0496117_0010895 Ga0496117_0010895_5191_7815 868
208 iso_pu_bacteria 2526164713 2527075255 870
209 iso_pu_bacteria 8055301274 8055302315 870
210 3300046459 Ga0495629_0012176 Ga0495629_0012176_3533_6211 871
211 3300046454 Ga0495592_0003520 Ga0495592_0003520_243_2927 872
212 3300046459 Ga0495629_0004280 Ga0495629_0004280_6077_8761 872
213 3300046462 Ga0495651_0003504 Ga0495651_0003504_9304_11988 872
214 3300046511 Ga0495608_0000558 Ga0495608_0000558_4012_6696 872
215 3300046526 Ga0495666_0001264 Ga0495666_0001264_6685_9369 872
216 3300046531 Ga0495665_0003010 Ga0495665_0003010_930_3614 872
217 3300046536 Ga0495587_0005537 Ga0495587_0005537_5487_8171 872
218 3300046663 Ga0495635_0010076 Ga0495635_0010076_905_3589 872
219 3300046689 Ga0495613_0005434 Ga0495613_0005434_3312_5996 872
220 3300046794 Ga0495589_0001933 Ga0495589_0001933_3059_5743 872
221 3300046809 Ga0495600_0004085 Ga0495600_0004085_359_3043 872
222 3300047317 Ga0495604_0008437 Ga0495604_0008437_399_3083 872
223 3300047323 Ga0495683_0002799 Ga0495683_0002799_1819_4503 872
224 3300047444 Ga0495675_0003628 Ga0495675_0003628_2731_5415 872
225 3300047469 Ga0495673_0008466 Ga0495673_0008466_2207_4891 872
226 3300048088 Ga0495602_0039284 Ga0495602_0039284_802_3486 872
227 3300048906 Ga0496103_0002433 Ga0496103_0002433_8062_10746 872
228 3300048920 Ga0496117_0007510 Ga0496117_0007510_1926_4610 872
229 3300048921 Ga0496118_0001933 Ga0496118_0001933_10304_12988 872
230 iso_pu_bacteria 2508501125 2509129047 872
231 3300002705 JGI25156J39149_1000771 JGI25156J39149_100077111 874
232 3300025226 Ga0209674_100113 Ga0209674_10011398 874
233 3300025256 Ga0209759_1000322 Ga0209759_100032229 874

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22666

Glyco_hydro_2_N2

Glycosyl hydrolase 2 galactose-binding domain-like

126

245

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vqu-assembly2.cif.gz_B structural and biochemical evidence for a boat-like transition state in beta-mannosidases 0.8514 44 834
2wbk-assembly2.cif.gz_B structure of the michaelis complex of beta-mannosidase, man2a, provides insight into the conformational itinerary of mannoside hydrolysis 0.8479 44 834
2vl4-assembly1.cif.gz_A structural and biochemical evidence for a boat-like transition state in beta-mannosidases 0.8476 44 834
2vqu-assembly1.cif.gz_A structural and biochemical evidence for a boat-like transition state in beta-mannosidases 0.8429 44 834
5n6u-assembly2.cif.gz_D crystal structure of beta-d-mannosidase from dictyoglomus thermophilum. 0.8425 44 836
ID Description Score Start End Superfamily
5n6uD03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8629 322 662 3.20.20.80
5n6uD03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8556 322 662 3.20.20.80
af_A0A1D8PSB1_286_626_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8454 322 661 3.20.20.80
2vmfA03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8428 322 662 3.20.20.80
af_Q552S3_434_783_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8393 322 660 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A357X5B5-F1-model_v4 deleted 0.9669 47 213
AF-A0A2U8WMM7-F1-model_v4 beta-mannosidase (EC 3.2.1.25) 0.9663 44 873 GO:0004567
GO:0006516
AF-A0A349XWZ9-F1-model_v4 Beta-mannosidase 0.9658 247 873 GO:0004567
GO:0006516
AF-A0A5A7W5M3-F1-model_v4 beta-mannosidase (EC 3.2.1.25) 0.9647 44 873 GO:0004567
GO:0006516
AF-A0A6L3N6Z5-F1-model_v4 Glycoside hydrolase family 2 protein 0.9647 286 871 GO:0004567
GO:0006516

Feature Viewer

pLDDT pTM Quality
88.47 0.9 High
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Predicted Structure (AlphaFold2)

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