F346629

General Info

Members Datasets Scaffolds Average Seq Length
233 154 467 346

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8005301065|8005303873
Length 397
Sequence SPHACHLLACWANNSENFVKQASICPGEPATQSLSQQEKLRPKDGHLMGTRTIKIENRLVGEGYPCFVIGEIAQAHDGSLGTAHAYIDALARAGVDAVKFQTHIASAESSPDEKFRINVFPQDGSRYDYWKRMEFSKDQWHSLFEHARRKNLIFLSSPFSFEAVDLLEALGVPAWKVGSGEVTNLPMLKKMSATGKPVLISSGMSSWSDMDEAVATVTDNGGQVGLFQCTTSYPCPPEKIGLNVIGELQTRYQRPVGLSDHSGTIYPSLAAVTLGAKLIEVHAVFSKDCFGPDVGASLTIPALTQLVEGIRYIEAMANSPLDKDAEARELEELRLLFGKSLYTRGDLPKGHRLEAGDIALKKPGTGIPAKNIDRVIGKRLIRDYRADEQLHESDMDD

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
92 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
96 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
99 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
105 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
130 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
146 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
151 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
152 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
153 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
154 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0.43
Isolates 2.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.58
Nodule 1.72
Rhizoplane 1.72
Rhizosphere 88.84
Stem 0
Stem Tuber 0
Unclassified 18.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10016472 3300003203 Unclassified 3080
2 rootH1_10191444 3300003316 Unclassified 2077
3 rootH1_10191444 3300003323 Bacteria 1915
4 rootH2_10307981 3300003320 Bacteria 1706
5 rootL2_10102669 3300003322 Bacteria 4151
6 rootL2_10133557 3300003322 Bacteria 3951
7 rootL2_10171631 3300003322 Bacteria 1530
8 rootH1_10098450 3300003323 Bacteria 3320
9 rootH1_10198978 3300003323 Bacteria 4535
10 JGI25160J50197_1001870 3300003354 Bacteria 10097
11 JGI25405J52794_10000707 3300003911 Bacteria 5067
12 Ga0058860_10056862 3300004801 Bacteria 4374
13 Ga0065715_10172885 3300005293 Unclassified 1533
14 Ga0070658_10025298 3300005327 Bacteria 4760
15 Ga0070683_100048553 3300005329 Bacteria 3924
16 Ga0070670_100003498 3300005331 Bacteria 13052
17 Ga0070680_100004536 3300005336 Bacteria 10451
18 Ga0068868_100232655 3300005338 Unclassified 1546
19 Ga0070661_100004578 3300005344 Bacteria 9513
20 Ga0070675_100069221 3300005354 Unclassified 2923
21 Ga0070671_100005944 3300005355 Bacteria 9723
22 Ga0070674_100126607 3300005356 Bacteria 1898
23 Ga0070673_100002930 3300005364 Bacteria 10517
24 Ga0070673_100011709 3300005364 Bacteria 5996
25 Ga0070688_100026963 3300005365 Bacteria 3419
26 Ga0070713_100321130 3300005436 Bacteria 1430
27 Ga0070700_100029113 3300005441 Unclassified 3290
28 Ga0070694_100004718 3300005444 Bacteria 8209
29 Ga0070678_100024992 3300005456 Unclassified 4010
30 Ga0070681_10000776 3300005458 Bacteria 26554
31 Ga0070681_10000921 3300005458 Bacteria 24871
32 Ga0068867_100021790 3300005459 Bacteria 4575
33 Ga0070707_100005243 3300005468 Bacteria 12128
34 Ga0070698_100007950 3300005471 Bacteria 11475
35 Ga0070699_100321236 3300005518 Bacteria 1391
36 Ga0070679_100000897 3300005530 Bacteria 25837
37 Ga0070697_100352514 3300005536 Archaea 1271
38 Ga0070686_100114665 3300005544 Bacteria 1841
39 Ga0070704_100004996 3300005549 Bacteria 7705
40 Ga0068855_100695683 3300005563 Unclassified 1088
41 Ga0070664_100143120 3300005564 Bacteria 2107
42 Ga0068857_100021865 3300005577 Bacteria 5629
43 Ga0068857_100251225 3300005577 Bacteria 1621
44 Ga0068852_100235705 3300005616 Bacteria 1747
45 Ga0068852_100393417 3300005616 Unclassified 1362
46 Ga0068864_100022827 3300005618 Bacteria 5248
47 Ga0068870_10024863 3300005840 Bacteria 2967
48 Ga0068858_100304234 3300005842 Unclassified 1522
49 Ga0068860_100055427 3300005843 Bacteria 3769
50 Ga0068862_100288567 3300005844 Unclassified 1506
51 Ga0081455_10010746 3300005937 Bacteria 9256
52 Ga0081539_10000082 3300005985 Bacteria 219763
53 Ga0075364_10006739 3300006051 Bacteria 6772
54 Ga0070712_100037583 3300006175 Bacteria 3302
55 Ga0075428_100019257 3300006844 Bacteria 7551
56 Ga0075428_100052515 3300006844 Bacteria 4467
57 Ga0075431_100003778 3300006847 Bacteria 14720
58 Ga0075431_100033062 3300006847 Bacteria 5330
59 Ga0075431_100147372 3300006847 Bacteria 2425
60 Ga0075433_10003826 3300006852 Bacteria 11648
61 Ga0075433_10063932 3300006852 Bacteria 3225
62 Ga0075434_100058318 3300006871 Bacteria 3837
63 Ga0111539_10130043 3300009094 Bacteria 2949
64 Ga0111539_10136646 3300009094 Bacteria 2871
65 Ga0105247_10035801 3300009101 Bacteria 3027
66 Ga0114129_10021661 3300009147 Bacteria 9122
67 Ga0114129_10374627 3300009147 Unclassified 1881
68 Ga0105243_10024469 3300009148 Bacteria 4606
69 Ga0105242_10037796 3300009176 Bacteria 3880
70 Ga0105237_10040265 3300009545 Unclassified 4713
71 Ga0105239_10007747 3300010375 Bacteria 12296
72 Ga0105239_10060937 3300010375 Bacteria 4142
73 Ga0105239_10252595 3300010375 Unclassified 1980
74 Ga0105246_10092482 3300011119 Bacteria 2183
75 Ga0157370_10021529 3300013104 Bacteria 6425
76 Ga0157370_10191939 3300013104 Bacteria 1896
77 Ga0157378_10006054 3300013297 Bacteria 10595
78 Ga0157378_10254583 3300013297 Bacteria 1682
79 Ga0157372_10100054 3300013307 Unclassified 3308
80 Ga0163163_10003667 3300014325 Bacteria 13065
81 Ga0157380_10184471 3300014326 Bacteria 1836
82 Ga0157376_10104196 3300014969 Unclassified 2485
83 Ga0213873_10000201 3300021358 Bacteria 10876
84 Ga0207426_1000009 3300025302 Bacteria 797229
85 Ga0207645_10033951 3300025907 Bacteria 3278
86 Ga0207643_10053065 3300025908 Unclassified 2303
87 Ga0207707_10001456 3300025912 Bacteria 21872
88 Ga0207707_10018407 3300025912 Bacteria 6090
89 Ga0207671_10037352 3300025914 Bacteria 3602
90 Ga0207660_10007782 3300025917 Bacteria 6937
91 Ga0207649_10013167 3300025920 Unclassified 4613
92 Ga0207652_10010797 3300025921 Bacteria 7356
93 Ga0207646_10003405 3300025922 Bacteria 17960
94 Ga0207669_10076963 3300025937 Bacteria 2120
95 Ga0207689_10002670 3300025942 Bacteria 16488
96 Ga0207661_10056248 3300025944 Bacteria 3158
97 Ga0207661_10078400 3300025944 Bacteria 2719
98 Ga0207679_10023853 3300025945 Bacteria 4188
99 Ga0207703_10260251 3300026035 Unclassified 1568
100 Ga0207708_10008898 3300026075 Bacteria 7432
101 Ga0207708_10009446 3300026075 Bacteria 7222
102 Ga0207648_10001774 3300026089 Bacteria 23627
103 Ga0207674_10010885 3300026116 Bacteria 10248
104 Ga0207674_10278362 3300026116 Bacteria 1621
105 Ga0207675_100038727 3300026118 Bacteria 4449
106 Ga0207675_100040577 3300026118 Unclassified 4347
107 Ga0207675_100424319 3300026118 Bacteria 1314
108 Ga0207683_10086948 3300026121 Bacteria 2780
109 Ga0207428_10000739 3300027907 Bacteria 37468
110 Ga0268265_10267429 3300028380 Unclassified 1523
111 Ga0268264_10041415 3300028381 Bacteria 3810
112 Ga0265338_10032338 3300028800 Bacteria 5107
113 Ga0265338_10136468 3300028800 Unclassified 1928
114 Ga0265325_10004227 3300031241 Bacteria 9111
115 Ga0265327_10000030 3300031251 Bacteria 333531
116 Ga0265327_10139423 3300031251 Unclassified 1134
117 Ga0307414_10000028 3300032004 Bacteria 192108
118 Ga0373960_0061027 3300035121 Unclassified 1144
119 Ga0316582_0111181 3300036647 Bacteria 1824
120 Ga0436364_1027125 3300037853 Unclassified 1920
121 Ga0400490_38521 3300038726 Bacteria 20196
122 Ga0400483_120336 3300039062 Bacteria 7510
123 Ga0436365_1202647 3300039437 Bacteria 5122
124 Ga0436362_0273268 3300039453 Bacteria 60013
125 Ga0439435_0029667 3300042436 Bacteria 1478
126 Ga0451577_0008789 3300042876 Bacteria 9787
127 Ga0453684_0000519 3300044712 Bacteria 147315
128 Ga0453684_0012563 3300044712 Bacteria 13940
129 Ga0453684_0029157 3300044712 Bacteria 7849
130 Ga0466968_0004667 3300044735 Bacteria 5130
131 Ga0495603_0051327 3300046455 Bacteria 2451
132 Ga0495665_0096117 3300046531 Bacteria 1556
133 Ga0495676_0094885 3300047321 Bacteria 2221
134 Ga0496102_0072808 3300048905 Bacteria 3158
135 Ga0496106_0042113 3300048909 Bacteria 3424
136 Ga0496106_0278712 3300048909 Bacteria 1339
137 Ga0496110_0509595 3300048913 Bacteria 1095
138 Ga0501299_001511 3300049522 Unclassified 3014
139 Ga0501033_0047824 3300049570 Bacteria 3180
140 Ga0501034_0000002 3300049571 Bacteria 565510
141 Ga0501034_0004795 3300049571 Bacteria 14954
142 Ga0501034_0092282 3300049571 Bacteria 3025
143 Ga0501036_0380151 3300049572 Unclassified 1179
144 Ga0501038_0009251 3300049574 Bacteria 9041
145 Ga0501038_0034198 3300049574 Bacteria 4472
146 Ga0501038_0178188 3300049574 Unclassified 1717
147 Ga0501038_0202854 3300049574 Unclassified 1590
148 Ga0501039_0019684 3300049575 Bacteria 5176
149 Ga0501039_0050716 3300049575 Unclassified 3211
150 Ga0501040_0074915 3300049576 Bacteria 2339
151 Ga0501041_0018511 3300049577 Bacteria 4149
152 Ga0501041_0022859 3300049577 Bacteria 3746
153 Ga0501041_0039225 3300049577 Bacteria 2874
154 Ga0501041_0051402 3300049577 Bacteria 2512
155 Ga0501042_0197021 3300049578 Bacteria 1453
156 Ga0501043_0190288 3300049579 Bacteria 1596
157 Ga0501043_0229863 3300049579 Bacteria 1433
158 Ga0501046_0020130 3300049580 Bacteria 5524
159 Ga0501046_0037401 3300049580 Bacteria 3900
160 Ga0501046_0043320 3300049580 Bacteria 3584
161 Ga0501046_0047074 3300049580 Bacteria 3420
162 Ga0501047_0026906 3300049581 Bacteria 5538
163 Ga0501047_0033384 3300049581 Unclassified 4967
164 Ga0501048_0016389 3300049582 Bacteria 5461
165 Ga0501048_0035412 3300049582 Unclassified 3594
166 Ga0501048_0039268 3300049582 Bacteria 3397
167 Ga0501048_0098607 3300049582 Unclassified 2061
168 Ga0501048_0210762 3300049582 Bacteria 1378
169 Ga0501069_0074320 3300049585 Bacteria 1907
170 Ga0501070_0158164 3300049586 Bacteria 1869
171 Ga0501071_0026200 3300049587 Bacteria 4090
172 Ga0501071_0079621 3300049587 Bacteria 2396
173 Ga0501071_0147918 3300049587 Bacteria 1751
174 Ga0501072_0036092 3300049588 Bacteria 3874
175 Ga0501072_0041149 3300049588 Unclassified 3629
176 Ga0501072_0066292 3300049588 Unclassified 2848
177 Ga0501072_0095636 3300049588 Bacteria 2361
178 Ga0501075_0001021 3300049591 Bacteria 17927
179 Ga0501075_0007205 3300049591 Bacteria 7705
180 Ga0501075_0020771 3300049591 Bacteria 4780
181 Ga0501075_0057170 3300049591 Bacteria 2937
182 Ga0501075_0090805 3300049591 Unclassified 2317
183 Ga0501076_0031370 3300049592 Bacteria 4143
184 Ga0501076_0053752 3300049592 Bacteria 3192
185 Ga0501076_0085458 3300049592 Unclassified 2535
186 Ga0501077_0108514 3300049593 Bacteria 1758
187 Ga0501077_0149412 3300049593 Bacteria 1482
188 Ga0501077_0179096 3300049593 Bacteria 1347
189 Ga0501227_000186 3300049665 Bacteria 12290
190 Ga0501233_009786 3300049668 Bacteria 1876
191 Ga0501079_0013443 3300049741 Bacteria 6242
192 Ga0501079_0035165 3300049741 Bacteria 3856
193 Ga0501079_0131130 3300049741 Bacteria 1951
194 Ga0501079_0358046 3300049741 Bacteria 1143
195 Ga0501080_0362451 3300049742 Bacteria 1308
196 Ga0501081_0069854 3300049743 Bacteria 2447
197 Ga0501081_0092013 3300049743 Bacteria 2133
198 Ga0501083_0162466 3300049744 Unclassified 1461
199 Ga0501035_0216040 3300049822 Unclassified 1639
200 Ga0501044_0200188 3300049823 Bacteria 1956
201 Ga0501045_0025708 3300049824 Bacteria 4234
202 Ga0501045_0039178 3300049824 Bacteria 3449
203 Ga0501045_0105942 3300049824 Bacteria 2083
204 nmdc:mga07m45_83877_c1 3300050496 Unclassified 1821
205 nmdc:mga05p37_207364_c1 3300050507 Bacteria 2370
206 nmdc:mga05p37_226849_c1 3300050507 Bacteria 2252
207 nmdc:mga05p37_32757_c1 3300050507 Bacteria 6358
208 nmdc:mga09592_9910_c1 3300050508 Bacteria 7750
209 nmdc:mga06r32_225393_c1 3300050510 Bacteria 1863
210 nmdc:mga06r32_71727_c1 3300050510 Bacteria 3352
211 nmdc:mga06r32_75186_c1 3300050510 Bacteria 3277
212 nmdc:mga06r32_9142_c1 3300050510 Bacteria 8932
213 nmdc:mga08y16_113427_c1 3300050511 Bacteria 2821
214 nmdc:mga08y16_120_c1 3300050511 Bacteria 67446
215 nmdc:mga0n895_96980_c1 3300050512 Bacteria 2954
216 nmdc:mga0a205_235779_c1 3300050515 Bacteria 1712
217 nmdc:mga0a205_75700_c1 3300050515 Bacteria 3252
218 Ga0500627_0009420 3300053158 Unclassified 3517
219 Ga0500645_019373 3300053730 Unclassified 2117
220 Ga0501084_0058387 3300054114 Bacteria 3228
221 Ga0501084_0076741 3300054114 Bacteria 2801
222 Ga0501084_0086462 3300054114 Bacteria 2633
223 Ga0501084_0300234 3300054114 Unclassified 1356
224 Ga0501082_0033692 3300060353 Bacteria 4418
225 Ga0501082_0043491 3300060353 Bacteria 3873
226 Ga0501082_0055216 3300060353 Bacteria 3422
227 Ga0530510_0007181 3300061734 Bacteria 7753
228 Ga0530510_0037847 3300061734 Bacteria 3480
229 Ga0530510_0095639 3300061734 Bacteria 2170
230 8005303873 8005301065 Bacteria 6614431
231 2838028153 2838022645 Bacteria 6494267
232 2842205243 2842198810 Bacteria 6608673
233 2965322005 2965320100 Bacteria 3975600
234 8057876080 8057874678 Bacteria 7494653
235 JGI25406J46586_10016472
236 rootH1_10191444
237 rootH2_10307981
238 rootL2_10102669
239 rootL2_10133557
240 rootL2_10171631
241 rootH1_10098450
242 rootH1_10198978
243 JGI25160J50197_1001870
244 JGI25405J52794_10000707
245 Ga0058860_10056862
246 Ga0065715_10172885
247 Ga0070658_10025298
248 Ga0070683_100048553
249 Ga0070670_100003498
250 Ga0070680_100004536
251 Ga0068868_100232655
252 Ga0070661_100004578
253 Ga0070675_100069221
254 Ga0070671_100005944
255 Ga0070674_100126607
256 Ga0070673_100002930
257 Ga0070673_100011709
258 Ga0070688_100026963
259 Ga0070713_100321130
260 Ga0070700_100029113
261 Ga0070694_100004718
262 Ga0070678_100024992
263 Ga0070681_10000776
264 Ga0070681_10000921
265 Ga0068867_100021790
266 Ga0070707_100005243
267 Ga0070698_100007950
268 Ga0070699_100321236
269 Ga0070679_100000897
270 Ga0070697_100352514
271 Ga0070686_100114665
272 Ga0070704_100004996
273 Ga0068855_100695683
274 Ga0070664_100143120
275 Ga0068857_100021865
276 Ga0068857_100251225
277 Ga0068852_100235705
278 Ga0068852_100393417
279 Ga0068864_100022827
280 Ga0068870_10024863
281 Ga0068858_100304234
282 Ga0068860_100055427
283 Ga0068862_100288567
284 Ga0081455_10010746
285 Ga0081539_10000082
286 Ga0075364_10006739
287 Ga0070712_100037583
288 Ga0075428_100019257
289 Ga0075428_100052515
290 Ga0075431_100003778
291 Ga0075431_100033062
292 Ga0075431_100147372
293 Ga0075433_10003826
294 Ga0075433_10063932
295 Ga0075434_100058318
296 Ga0111539_10130043
297 Ga0111539_10136646
298 Ga0105247_10035801
299 Ga0114129_10021661
300 Ga0114129_10374627
301 Ga0105243_10024469
302 Ga0105242_10037796
303 Ga0105237_10040265
304 Ga0105239_10007747
305 Ga0105239_10060937
306 Ga0105239_10252595
307 Ga0105246_10092482
308 Ga0157370_10021529
309 Ga0157370_10191939
310 Ga0157378_10006054
311 Ga0157378_10254583
312 Ga0157372_10100054
313 Ga0163163_10003667
314 Ga0157380_10184471
315 Ga0157376_10104196
316 Ga0213873_10000201
317 Ga0207426_1000009
318 Ga0207645_10033951
319 Ga0207643_10053065
320 Ga0207707_10001456
321 Ga0207707_10018407
322 Ga0207671_10037352
323 Ga0207660_10007782
324 Ga0207649_10013167
325 Ga0207652_10010797
326 Ga0207646_10003405
327 Ga0207669_10076963
328 Ga0207689_10002670
329 Ga0207661_10056248
330 Ga0207661_10078400
331 Ga0207679_10023853
332 Ga0207703_10260251
333 Ga0207708_10008898
334 Ga0207708_10009446
335 Ga0207648_10001774
336 Ga0207674_10010885
337 Ga0207674_10278362
338 Ga0207675_100038727
339 Ga0207675_100040577
340 Ga0207675_100424319
341 Ga0207683_10086948
342 Ga0207428_10000739
343 Ga0268265_10267429
344 Ga0268264_10041415
345 Ga0265338_10032338
346 Ga0265338_10136468
347 Ga0265325_10004227
348 Ga0265327_10000030
349 Ga0265327_10139423
350 Ga0307414_10000028
351 Ga0373960_0061027
352 Ga0316582_0111181
353 Ga0436364_1027125
354 Ga0400490_38521
355 Ga0400483_120336
356 Ga0436365_1202647
357 Ga0436362_0273268
358 Ga0439435_0029667
359 Ga0451577_0008789
360 Ga0453684_0000519
361 Ga0453684_0012563
362 Ga0453684_0029157
363 Ga0466968_0004667
364 Ga0495603_0051327
365 Ga0495665_0096117
366 Ga0495676_0094885
367 Ga0496102_0072808
368 Ga0496106_0042113
369 Ga0496106_0278712
370 Ga0496110_0509595
371 Ga0501299_001511
372 Ga0501033_0047824
373 Ga0501034_0000002
374 Ga0501034_0004795
375 Ga0501034_0092282
376 Ga0501036_0380151
377 Ga0501038_0009251
378 Ga0501038_0034198
379 Ga0501038_0178188
380 Ga0501038_0202854
381 Ga0501039_0019684
382 Ga0501039_0050716
383 Ga0501040_0074915
384 Ga0501041_0018511
385 Ga0501041_0022859
386 Ga0501041_0039225
387 Ga0501041_0051402
388 Ga0501042_0197021
389 Ga0501043_0190288
390 Ga0501043_0229863
391 Ga0501046_0020130
392 Ga0501046_0037401
393 Ga0501046_0043320
394 Ga0501046_0047074
395 Ga0501047_0026906
396 Ga0501047_0033384
397 Ga0501048_0016389
398 Ga0501048_0035412
399 Ga0501048_0039268
400 Ga0501048_0098607
401 Ga0501048_0210762
402 Ga0501069_0074320
403 Ga0501070_0158164
404 Ga0501071_0026200
405 Ga0501071_0079621
406 Ga0501071_0147918
407 Ga0501072_0036092
408 Ga0501072_0041149
409 Ga0501072_0066292
410 Ga0501072_0095636
411 Ga0501075_0001021
412 Ga0501075_0007205
413 Ga0501075_0020771
414 Ga0501075_0057170
415 Ga0501075_0090805
416 Ga0501076_0031370
417 Ga0501076_0053752
418 Ga0501076_0085458
419 Ga0501077_0108514
420 Ga0501077_0149412
421 Ga0501077_0179096
422 Ga0501227_000186
423 Ga0501233_009786
424 Ga0501079_0013443
425 Ga0501079_0035165
426 Ga0501079_0131130
427 Ga0501079_0358046
428 Ga0501080_0362451
429 Ga0501081_0069854
430 Ga0501081_0092013
431 Ga0501083_0162466
432 Ga0501035_0216040
433 Ga0501044_0200188
434 Ga0501045_0025708
435 Ga0501045_0039178
436 Ga0501045_0105942
437 nmdc:mga07m45_83877_c1
438 nmdc:mga05p37_207364_c1
439 nmdc:mga05p37_226849_c1
440 nmdc:mga05p37_32757_c1
441 nmdc:mga09592_9910_c1
442 nmdc:mga06r32_225393_c1
443 nmdc:mga06r32_71727_c1
444 nmdc:mga06r32_75186_c1
445 nmdc:mga06r32_9142_c1
446 nmdc:mga08y16_113427_c1
447 nmdc:mga08y16_120_c1
448 nmdc:mga0n895_96980_c1
449 nmdc:mga0a205_235779_c1
450 nmdc:mga0a205_75700_c1
451 Ga0500627_0009420
452 Ga0500645_019373
453 Ga0501084_0058387
454 Ga0501084_0076741
455 Ga0501084_0086462
456 Ga0501084_0300234
457 Ga0501082_0033692
458 Ga0501082_0043491
459 Ga0501082_0055216
460 Ga0530510_0007181
461 Ga0530510_0037847
462 Ga0530510_0095639
463 8005303873
464 2838028153
465 2842205243
466 2965322005
467 8057876080

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03102

NeuB

NeuB family

86

321

0.96

PF08666

SAF

SAF domain

338

395

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wvo-assembly1.cif.gz_A solution structure of rsgi ruh-029, an antifreeze protein like domain in human n-acetylneuraminic acid phosphate synthase gene. 0.9609 284 342
4ur4-assembly1.cif.gz_A structure of the type iii fish antifreeze protein from zoarces viviparus zvafp13 0.9559 284 341
5xqr-assembly1.cif.gz_B crystal structure of notched-fin eelpout type iii antifreeze protein a20v mutant (nfe6, afp), c2221 form 0.9508 285 342
1b7j-assembly1.cif.gz_A type iii antifreeze protein isoform hplc 12 v20a 0.9493 284 341
1gzi-assembly1.cif.gz_A crystal structure of type iii antifreeze protein from ocean pout, at 1.8 angstrom resolution 0.949 284 341
ID Description Score Start End Superfamily
1wvoA00 Alpha Beta;Alpha-Beta Complex;Type Iii Antifreeze Protein Isoform Hplc 12;Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.9609 284 342 3.90.1210.10
af_Q9VG74_312_372_3.90.1210.10 Alpha Beta;Alpha-Beta Complex;Type Iii Antifreeze Protein Isoform Hplc 12;Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.9534 285 342 3.90.1210.10
af_Q99J77_9_276_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9527 11 266 3.20.20.70
5xqrB00 Alpha Beta;Alpha-Beta Complex;Type Iii Antifreeze Protein Isoform Hplc 12;Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.9508 285 342 3.90.1210.10
af_A0A0G2L5X9_296_357_3.90.1210.10 Alpha Beta;Alpha-Beta Complex;Type Iii Antifreeze Protein Isoform Hplc 12;Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.949 284 342 3.90.1210.10
ID Description Score Start End GO Terms
AF-A0A836X375-F1-model_v4 AFP-like domain-containing protein 0.9966 285 342
AF-A0A3A8ZZB3-F1-model_v4 N-acetylneuraminate synthase 0.9851 11 341 GO:0016051
GO:0047444
GO:0070085
AF-A0A1R4HA38-F1-model_v4 AFP-like domain-containing protein 0.9781 285 342
AF-A0A2E7TT85-F1-model_v4 N-acetylneuraminate synthase 0.9746 11 342 GO:0016051
GO:0047444
GO:0070085
AF-A0A0R0LH80-F1-model_v4 N,N'-diacetyllegionaminic acid synthase (EC 2.5.1.101) 0.9737 12 342 GO:0016051
GO:0047444
GO:0070085

Map