F347066

General Info

Members Datasets Scaffolds Average Seq Length
234 172 468 316

Family's Representative Sequence

Representative Sequence 3300009553|Ga0105249_10122979|Ga0105249_101229791
Length 377
Sequence MQRILHPAQIEAFAERSIPRVRLPDPAVFGQRAERLRFLSAHHSLREYLLLMAAVAQAQQVQFDSLRSALVAERFVEHIGKQLELAQTHRMPVLQTAGWPRQDRWRHILRALCSALVIHRPGVVQSTAVKMSFADAPATTPETARQSSSSGVPTAQGGALVSSGLAATGDNSRSSDGADATVHAFPPAVYGLCERIMAAPDGELDAQADLLIASRTEGVDGPAAPFIMAALQVYWAAMASTLRVADVSQLDVPTVCPVCGTPPVASIVRFDKRGPQGYRYLHCGLCETEWHMVRITCSHCLSTEGITYNAIEGGTEAIRAETCGKCHTYRKILYQEKDTGVEPVADDLASLTLDLLMTEDGFHRGSGNPLLWQTSET

Samples

Sample ID Description Type Environment
1 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
47 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
48 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
50 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
77 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
78 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
79 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
90 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
102 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
106 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
107 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
108 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
109 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
138 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
139 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
140 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
141 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
142 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
143 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
147 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
148 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
149 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
150 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
151 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
152 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
153 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
154 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
155 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
156 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
157 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
158 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
159 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
160 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
161 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
162 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
163 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
164 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
165 2831864461 Roseateles noduli HZ7 Isolate Nodule
166 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
167 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
168 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
169 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
170 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
171 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
172 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.46
Metatranscriptomes 0
Isolates 11.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.82
Nodule 4.27
Rhizoplane 7.26
Rhizosphere 53.85
Stem 0
Stem Tuber 0
Unclassified 2.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105249_10122979 3300009553 Bacteria 2468
2 rootH1_10016352 3300003316 Bacteria 3265
3 rootH1_10111195 3300003316 Unclassified 1762
4 rootL2_10000990 3300003322 Bacteria 26203
5 rootL2_10027157 3300003322 Bacteria 2162
6 rootL2_10084108 3300003322 Bacteria 4035
7 rootL2_10180553 3300003322 Bacteria 2628
8 rootH1_10008856 3300003323 Bacteria 3336
9 rootH1_10012485 3300003323 Bacteria 4013
10 rootH1_10246838 3300003323 Bacteria 2146
11 rootH1_10270616 3300003323 Bacteria 3288
12 JGI25160J50197_1000025 3300003354 Bacteria 186706
13 Ga0055526_1000493 3300003771 Bacteria 31380
14 Ga0055524_1002328 3300003775 Bacteria 9882
15 Ga0055531_10001959 3300003794 Bacteria 14375
16 Ga0055531_10006026 3300003794 Bacteria 6955
17 Ga0055543_1017347 3300004625 Bacteria 1356
18 Ga0065165_1000418 3300005262 Bacteria 67473
19 Ga0065165_1001912 3300005262 Bacteria 19916
20 Ga0065165_1001970 3300005262 Bacteria 19400
21 Ga0068869_100112544 3300005334 Bacteria 2072
22 Ga0068869_100199122 3300005334 Bacteria 1578
23 Ga0068868_100123954 3300005338 Bacteria 2109
24 Ga0070667_100014136 3300005367 Bacteria 6596
25 Ga0070667_100024804 3300005367 Bacteria 4982
26 Ga0070709_10013666 3300005434 Bacteria 4571
27 Ga0070714_100010711 3300005435 Bacteria 7255
28 Ga0070713_100150785 3300005436 Bacteria 2068
29 Ga0070713_100230128 3300005436 Bacteria 1684
30 Ga0070711_100113002 3300005439 Bacteria 1997
31 Ga0070705_100134165 3300005440 Bacteria 1619
32 Ga0068853_100179087 3300005539 Bacteria 1922
33 Ga0070686_100037944 3300005544 Bacteria 2992
34 Ga0070665_100000095 3300005548 Bacteria 170459
35 Ga0070665_100027594 3300005548 Bacteria 5718
36 Ga0068855_100105485 3300005563 Bacteria 3240
37 Ga0068857_100063772 3300005577 Bacteria 3276
38 Ga0068859_100000120 3300005617 Bacteria 74447
39 Ga0068863_100002681 3300005841 Bacteria 17597
40 Ga0068862_100021499 3300005844 Bacteria 5392
41 Ga0070717_10008311 3300006028 Bacteria 7749
42 Ga0070716_100016380 3300006173 Bacteria 3825
43 Ga0075370_10006532 3300006353 Bacteria 5872
44 Ga0075436_100163590 3300006914 Bacteria 1569
45 Ga0097620_100000120 3300006931 Bacteria 74447
46 Ga0099823_1000555 3300006944 Bacteria 25739
47 Ga0075435_100141332 3300007076 Bacteria 2020
48 Ga0105250_10015279 3300009092 Bacteria 3144
49 Ga0105240_10169933 3300009093 Bacteria 2583
50 Ga0105247_10001301 3300009101 Bacteria 18392
51 Ga0105241_10179278 3300009174 Unclassified 1756
52 Ga0105242_10035030 3300009176 Bacteria 4025
53 Ga0105237_10566760 3300009545 Bacteria 1142
54 Ga0105238_10066626 3300009551 Bacteria 3602
55 Ga0105249_10160964 3300009553 Bacteria 2169
56 Ga0105239_10103140 3300010375 Bacteria 3157
57 Ga0105239_10259991 3300010375 Unclassified 1951
58 Ga0105239_10401801 3300010375 Bacteria 1550
59 Ga0157319_1000013 3300012497 Bacteria 154883
60 Ga0163162_10062340 3300013306 Bacteria 3769
61 Ga0163162_10114756 3300013306 Bacteria 2793
62 Ga0163163_10028273 3300014325 Bacteria 5382
63 Ga0163163_10142380 3300014325 Bacteria 2440
64 Ga0157379_10014976 3300014968 Bacteria 6802
65 Ga0183361_10002 3300016635 Bacteria 907642
66 Ga0213872_10000185 3300021361 Bacteria 55707
67 Ga0209673_1001846 3300025273 Bacteria 17290
68 Ga0209673_1012498 3300025273 Bacteria 3414
69 Ga0209673_1016181 3300025273 Bacteria 2801
70 Ga0209130_1004686 3300025284 Bacteria 5067
71 Ga0209564_1000003 3300025295 Bacteria 1585848
72 Ga0209564_1003893 3300025295 Bacteria 9591
73 Ga0209050_1001637 3300025298 Bacteria 22932
74 Ga0209256_1000301 3300025299 Bacteria 86690
75 Ga0209256_1000826 3300025299 Bacteria 39205
76 Ga0207426_1000020 3300025302 Bacteria 558084
77 Ga0209051_1004459 3300025303 Bacteria 8616
78 Ga0209257_1000967 3300025304 Bacteria 39365
79 Ga0209257_1001139 3300025304 Bacteria 34026
80 Ga0207710_10000498 3300025900 Bacteria 24454
81 Ga0207699_10180561 3300025906 Bacteria 1418
82 Ga0207695_10093245 3300025913 Bacteria 3021
83 Ga0207695_10167959 3300025913 Bacteria 2121
84 Ga0207693_10039128 3300025915 Bacteria 3734
85 Ga0207694_10288917 3300025924 Bacteria 1348
86 Ga0207700_10020382 3300025928 Bacteria 4502
87 Ga0207664_10007392 3300025929 Bacteria 7614
88 Ga0207644_10040004 3300025931 Bacteria 3311
89 Ga0207665_10017203 3300025939 Bacteria 4750
90 Ga0207667_10218347 3300025949 Bacteria 1954
91 Ga0207712_10129942 3300025961 Bacteria 1918
92 Ga0207658_10020465 3300025986 Bacteria 4581
93 Ga0207677_10098940 3300026023 Bacteria 2141
94 Ga0207703_10019246 3300026035 Bacteria 5332
95 Ga0207678_10034262 3300026067 Bacteria 4423
96 Ga0207674_10026304 3300026116 Bacteria 6184
97 Ga0209389_1002551 3300027296 Bacteria 14089
98 Ga0268266_10000001 3300028379 Bacteria 4040580
99 Ga0268265_10018104 3300028380 Bacteria 4877
100 Ga0265338_10000058 3300028800 Bacteria 198555
101 Ga0265338_10002184 3300028800 Bacteria 30002
102 Ga0307511_10001581 3300030521 Bacteria 24145
103 Ga0307511_10103688 3300030521 Bacteria 1851
104 Ga0307408_100048453 3300031548 Bacteria 3048
105 Ga0307508_10210630 3300031616 Bacteria 1544
106 Ga0307510_10000016 3300033180 Bacteria 206932
107 Ga0307510_10005308 3300033180 Bacteria 15330
108 Ga0373937_0058365 3300036401 Bacteria 3545
109 Ga0395905_0000052 3300037471 Bacteria 215018
110 Ga0395905_0202890 3300037471 Bacteria 1859
111 Ga0436361_0517028 3300039447 Bacteria 27288
112 Ga0450890_001482 3300042127 Bacteria 3373
113 Ga0451577_0088005 3300042876 Bacteria 2771
114 Ga0451577_0398759 3300042876 Unclassified 1248
115 Ga0451577_0501718 3300042876 Bacteria 1102
116 Ga0453684_0004431 3300044712 Bacteria 29651
117 Ga0453684_0072013 3300044712 Bacteria 4366
118 Ga0453684_0323130 3300044712 Bacteria 1747
119 Ga0451576_0128450 3300045051 Bacteria 2642
120 Ga0495603_0006512 3300046455 Bacteria 7001
121 Ga0495603_0071555 3300046455 Bacteria 2038
122 Ga0495638_0088641 3300046460 Bacteria 1868
123 Ga0495580_0002815 3300046472 Bacteria 14955
124 Ga0495580_0003791 3300046472 Bacteria 12807
125 Ga0495580_0132266 3300046472 Bacteria 1730
126 Ga0495580_0182689 3300046472 Bacteria 1448
127 Ga0495583_0006641 3300046506 Bacteria 7506
128 Ga0495606_0006983 3300046507 Bacteria 10261
129 Ga0495628_0030624 3300046516 Bacteria 4356
130 Ga0495637_0047348 3300046520 Bacteria 1815
131 Ga0495648_0097083 3300046524 Bacteria 1635
132 Ga0495652_0032536 3300046529 Bacteria 4560
133 Ga0495665_0024843 3300046531 Bacteria 3219
134 Ga0495665_0042025 3300046531 Bacteria 2434
135 Ga0495645_0200092 3300046543 Bacteria 1356
136 Ga0495658_0006818 3300046683 Bacteria 5623
137 Ga0495669_0122396 3300046684 Bacteria 1220
138 Ga0495624_0064722 3300046690 Bacteria 2285
139 Ga0495670_0036560 3300046691 Bacteria 2447
140 Ga0495649_0002573 3300046694 Bacteria 12698
141 Ga0495674_0363854 3300047319 Bacteria 1172
142 Ga0495672_0066296 3300047320 Bacteria 2061
143 Ga0495672_0085598 3300047320 Bacteria 1746
144 Ga0495683_0068296 3300047323 Bacteria 1748
145 Ga0495687_037101 3300047443 Bacteria 2174
146 Ga0495614_0045266 3300048089 Unclassified 1887
147 Ga0496100_0000126 3300048903 Bacteria 42971
148 Ga0496101_0000217 3300048904 Bacteria 42961
149 Ga0496102_0000502 3300048905 Bacteria 42952
150 Ga0496102_0013488 3300048905 Bacteria 7079
151 Ga0496102_0025080 3300048905 Bacteria 5304
152 Ga0496102_0476585 3300048905 Bacteria 1169
153 Ga0496103_0013972 3300048906 Bacteria 4765
154 Ga0496104_0009008 3300048907 Bacteria 8876
155 Ga0496104_0124821 3300048907 Bacteria 2471
156 Ga0496104_0449883 3300048907 Bacteria 1200
157 Ga0496105_0179026 3300048908 Bacteria 1736
158 Ga0496106_0000001 3300048909 Bacteria 497458
159 Ga0496107_0078885 3300048910 Bacteria 2400
160 Ga0496107_0188134 3300048910 Bacteria 1534
161 Ga0496108_0081898 3300048911 Bacteria 2736
162 Ga0496112_0076021 3300048915 Bacteria 3321
163 Ga0496113_0088935 3300048916 Bacteria 2376
164 Ga0496116_0006958 3300048919 Bacteria 10138
165 Ga0496116_0077926 3300048919 Bacteria 2069
166 Ga0496117_0000269 3300048920 Bacteria 97097
167 Ga0496117_0001016 3300048920 Bacteria 42924
168 Ga0496117_0061194 3300048920 Bacteria 2590
169 Ga0496118_0000119 3300048921 Bacteria 143232
170 Ga0496118_0000138 3300048921 Bacteria 128826
171 Ga0496118_0013256 3300048921 Bacteria 7817
172 Ga0496118_0035496 3300048921 Bacteria 4047
173 Ga0496119_0005221 3300048922 Bacteria 12532
174 Ga0496120_0000146 3300048923 Bacteria 119164
175 Ga0496121_0001379 3300048924 Bacteria 41163
176 Ga0496121_0001394 3300048924 Bacteria 40889
177 Ga0496121_0008880 3300048924 Bacteria 11686
178 Ga0496121_0048927 3300048924 Bacteria 3591
179 Ga0496121_0117098 3300048924 Bacteria 2019
180 Ga0496124_0009860 3300048927 Bacteria 9768
181 Ga0496124_0204193 3300048927 Bacteria 1500
182 Ga0496125_0019506 3300048928 Bacteria 6393
183 Ga0496125_0255563 3300048928 Bacteria 1102
184 Ga0496126_0000172 3300048929 Bacteria 147759
185 Ga0496126_0013832 3300048929 Bacteria 8185
186 Ga0496126_0028835 3300048929 Bacteria 5282
187 Ga0496126_0097544 3300048929 Bacteria 2576
188 Ga0496126_0205873 3300048929 Bacteria 1659
189 Ga0495682_0076544 3300049460 Bacteria 1203
190 Ga0501031_0005511 3300049568 Bacteria 8240
191 Ga0501037_0278751 3300049573 Bacteria 1165
192 Ga0501039_0083537 3300049575 Bacteria 2487
193 Ga0501075_0015831 3300049591 Bacteria 5423
194 Ga0501076_0015160 3300049592 Bacteria 5820
195 Ga0501077_0023647 3300049593 Bacteria 3896
196 Ga0501081_0035117 3300049743 Bacteria 3413
197 Ga0501045_0062239 3300049824 Bacteria 2738
198 nmdc:mga07m45_1236_c1 3300050496 Bacteria 9062
199 Ga0500643_049715 3300053087 Bacteria 1202
200 Ga0500651_0001244 3300053093 Bacteria 12675
201 Ga0500559_0062344 3300053136 Bacteria 1665
202 Ga0500568_0024139 3300053139 Bacteria 2577
203 Ga0500577_0023681 3300053142 Bacteria 2055
204 Ga0500622_0005788 3300053156 Bacteria 7331
205 Ga0501084_0438929 3300054114 Bacteria 1104
206 Ga0501082_0015224 3300060353 Bacteria 6626
207 Ga0530510_0237877 3300061734 Bacteria 1355
208 2501071869 2501025501 Bacteria 7768574
209 2501084247 2501025502 Bacteria 9641094
210 2501411759 2501025504 Bacteria 8008976
211 2511088667 2510917013 Bacteria 9951648
212 2511100760 2510917014 Bacteria 8296963
213 2511107548 2510917015 Bacteria 7950052
214 2512348510 2512047030 Bacteria 9031815
215 2513553191 2513237082 Bacteria 8640282
216 2513564581 2513237083 Bacteria 8410967
217 2514053582 2513237166 Bacteria 10373764
218 2516021047 2515154189 Bacteria 9629850
219 2563060667 2562617112 Bacteria 10918404
220 2600811243 2600255067 Bacteria 6795583
221 2713475847 2711768613 Bacteria 11048459
222 2792835649 2791355137 Bacteria 9654227
223 2808967883 2808606384 Bacteria 8474373
224 2809002714 2808606390 Bacteria 8476311
225 2809009992 2808606391 Bacteria 8308166
226 2831865720 2831864461 Bacteria 6502356
227 2883090793 2883087390 Bacteria 9532701
228 2886852626 2886848708 Bacteria 5632523
229 2904617816 2904615490 Bacteria 10047340
230 2904618315 2904615490 Bacteria 10047340
231 2921655765 2921643360 Bacteria 11448031
232 642596273 642555112 Bacteria 8676562
233 8003960123 8003955200 Bacteria 8601927
234 8048748787 8048746797 Bacteria 3557226
235 Ga0105249_10122979
236 rootH1_10016352
237 rootH1_10111195
238 rootL2_10000990
239 rootL2_10027157
240 rootL2_10084108
241 rootL2_10180553
242 rootH1_10008856
243 rootH1_10012485
244 rootH1_10246838
245 rootH1_10270616
246 JGI25160J50197_1000025
247 Ga0055526_1000493
248 Ga0055524_1002328
249 Ga0055531_10001959
250 Ga0055531_10006026
251 Ga0055543_1017347
252 Ga0065165_1000418
253 Ga0065165_1001912
254 Ga0065165_1001970
255 Ga0068869_100112544
256 Ga0068869_100199122
257 Ga0068868_100123954
258 Ga0070667_100014136
259 Ga0070667_100024804
260 Ga0070709_10013666
261 Ga0070714_100010711
262 Ga0070713_100150785
263 Ga0070713_100230128
264 Ga0070711_100113002
265 Ga0070705_100134165
266 Ga0068853_100179087
267 Ga0070686_100037944
268 Ga0070665_100000095
269 Ga0070665_100027594
270 Ga0068855_100105485
271 Ga0068857_100063772
272 Ga0068859_100000120
273 Ga0068863_100002681
274 Ga0068862_100021499
275 Ga0070717_10008311
276 Ga0070716_100016380
277 Ga0075370_10006532
278 Ga0075436_100163590
279 Ga0097620_100000120
280 Ga0099823_1000555
281 Ga0075435_100141332
282 Ga0105250_10015279
283 Ga0105240_10169933
284 Ga0105247_10001301
285 Ga0105241_10179278
286 Ga0105242_10035030
287 Ga0105237_10566760
288 Ga0105238_10066626
289 Ga0105249_10160964
290 Ga0105239_10103140
291 Ga0105239_10259991
292 Ga0105239_10401801
293 Ga0157319_1000013
294 Ga0163162_10062340
295 Ga0163162_10114756
296 Ga0163163_10028273
297 Ga0163163_10142380
298 Ga0157379_10014976
299 Ga0183361_10002
300 Ga0213872_10000185
301 Ga0209673_1001846
302 Ga0209673_1012498
303 Ga0209673_1016181
304 Ga0209130_1004686
305 Ga0209564_1000003
306 Ga0209564_1003893
307 Ga0209050_1001637
308 Ga0209256_1000301
309 Ga0209256_1000826
310 Ga0207426_1000020
311 Ga0209051_1004459
312 Ga0209257_1000967
313 Ga0209257_1001139
314 Ga0207710_10000498
315 Ga0207699_10180561
316 Ga0207695_10093245
317 Ga0207695_10167959
318 Ga0207693_10039128
319 Ga0207694_10288917
320 Ga0207700_10020382
321 Ga0207664_10007392
322 Ga0207644_10040004
323 Ga0207665_10017203
324 Ga0207667_10218347
325 Ga0207712_10129942
326 Ga0207658_10020465
327 Ga0207677_10098940
328 Ga0207703_10019246
329 Ga0207678_10034262
330 Ga0207674_10026304
331 Ga0209389_1002551
332 Ga0268266_10000001
333 Ga0268265_10018104
334 Ga0265338_10000058
335 Ga0265338_10002184
336 Ga0307511_10001581
337 Ga0307511_10103688
338 Ga0307408_100048453
339 Ga0307508_10210630
340 Ga0307510_10000016
341 Ga0307510_10005308
342 Ga0373937_0058365
343 Ga0395905_0000052
344 Ga0395905_0202890
345 Ga0436361_0517028
346 Ga0450890_001482
347 Ga0451577_0088005
348 Ga0451577_0398759
349 Ga0451577_0501718
350 Ga0453684_0004431
351 Ga0453684_0072013
352 Ga0453684_0323130
353 Ga0451576_0128450
354 Ga0495603_0006512
355 Ga0495603_0071555
356 Ga0495638_0088641
357 Ga0495580_0002815
358 Ga0495580_0003791
359 Ga0495580_0132266
360 Ga0495580_0182689
361 Ga0495583_0006641
362 Ga0495606_0006983
363 Ga0495628_0030624
364 Ga0495637_0047348
365 Ga0495648_0097083
366 Ga0495652_0032536
367 Ga0495665_0024843
368 Ga0495665_0042025
369 Ga0495645_0200092
370 Ga0495658_0006818
371 Ga0495669_0122396
372 Ga0495624_0064722
373 Ga0495670_0036560
374 Ga0495649_0002573
375 Ga0495674_0363854
376 Ga0495672_0066296
377 Ga0495672_0085598
378 Ga0495683_0068296
379 Ga0495687_037101
380 Ga0495614_0045266
381 Ga0496100_0000126
382 Ga0496101_0000217
383 Ga0496102_0000502
384 Ga0496102_0013488
385 Ga0496102_0025080
386 Ga0496102_0476585
387 Ga0496103_0013972
388 Ga0496104_0009008
389 Ga0496104_0124821
390 Ga0496104_0449883
391 Ga0496105_0179026
392 Ga0496106_0000001
393 Ga0496107_0078885
394 Ga0496107_0188134
395 Ga0496108_0081898
396 Ga0496112_0076021
397 Ga0496113_0088935
398 Ga0496116_0006958
399 Ga0496116_0077926
400 Ga0496117_0000269
401 Ga0496117_0001016
402 Ga0496117_0061194
403 Ga0496118_0000119
404 Ga0496118_0000138
405 Ga0496118_0013256
406 Ga0496118_0035496
407 Ga0496119_0005221
408 Ga0496120_0000146
409 Ga0496121_0001379
410 Ga0496121_0001394
411 Ga0496121_0008880
412 Ga0496121_0048927
413 Ga0496121_0117098
414 Ga0496124_0009860
415 Ga0496124_0204193
416 Ga0496125_0019506
417 Ga0496125_0255563
418 Ga0496126_0000172
419 Ga0496126_0013832
420 Ga0496126_0028835
421 Ga0496126_0097544
422 Ga0496126_0205873
423 Ga0495682_0076544
424 Ga0501031_0005511
425 Ga0501037_0278751
426 Ga0501039_0083537
427 Ga0501075_0015831
428 Ga0501076_0015160
429 Ga0501077_0023647
430 Ga0501081_0035117
431 Ga0501045_0062239
432 nmdc:mga07m45_1236_c1
433 Ga0500643_049715
434 Ga0500651_0001244
435 Ga0500559_0062344
436 Ga0500568_0024139
437 Ga0500577_0023681
438 Ga0500622_0005788
439 Ga0501084_0438929
440 Ga0501082_0015224
441 Ga0530510_0237877
442 2501071869
443 2501084247
444 2501411759
445 2511088667
446 2511100760
447 2511107548
448 2512348510
449 2513553191
450 2513564581
451 2514053582
452 2516021047
453 2563060667
454 2600811243
455 2713475847
456 2792835649
457 2808967883
458 2809002714
459 2809009992
460 2831865720
461 2883090793
462 2886852626
463 2904617816
464 2904618315
465 2921655765
466 642596273
467 8003960123
468 8048748787

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04216

FdhE

Protein involved in formate dehydrogenase formation

177

372

0.95

PF04216

FdhE

Protein involved in formate dehydrogenase formation

16

155

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fiy-assembly2.cif.gz_B the crystal structure of the fdhe protein from pseudomonas aeruginosa 0.8709 19 303
2fiy-assembly2.cif.gz_B the crystal structure of the fdhe protein from pseudomonas aeruginosa 0.8592 19 303
2fiy-assembly1.cif.gz_A the crystal structure of the fdhe protein from pseudomonas aeruginosa 0.8546 19 303
2fiy-assembly1.cif.gz_A the crystal structure of the fdhe protein from pseudomonas aeruginosa 0.846 19 303
7qpk-assembly1.cif.gz_A structure of the a-region of awp14 from candida glabrata 0.6256 225 264
ID Description Score Start End Superfamily
af_P13024_23_308_3.90.1670.10 Alpha Beta;Alpha-Beta Complex;FdhE-like fold;FdhE-like domain 0.9471 19 303 3.90.1670.10
af_P13024_23_308_3.90.1670.10 Alpha Beta;Alpha-Beta Complex;FdhE-like fold;FdhE-like domain 0.9343 19 303 3.90.1670.10
2fiyB00 Alpha Beta;Alpha-Beta Complex;FdhE-like fold;FdhE-like domain 0.8709 19 303 3.90.1670.10
2fiyB00 Alpha Beta;Alpha-Beta Complex;FdhE-like fold;FdhE-like domain 0.8592 19 303 3.90.1670.10
af_A0A0R0LJ86_96_346_3.40.50.1110 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;SGNH hydrolase 0.6658 236 264 3.40.50.1110
ID Description Score Start End GO Terms
AF-A0A848NGV3-F1-model_v4 Formate dehydrogenase accessory protein FdhE 0.9803 221 308 GO:0005829
GO:0008199
GO:0051604
AF-A0A0E1TW98-F1-model_v4 deleted 0.9764 1 309
AF-A0A0J6C814-F1-model_v4 Protein FdhE homolog 0.9749 1 302 GO:0005829
GO:0008199
GO:0051604
AF-A0A8A8ME80-F1-model_v4 deleted 0.9744 1 309
AF-A0A0E1TW98-F1-model_v4 deleted 0.9733 1 309

Map