F347203

General Info

Members Datasets Scaffolds Average Seq Length
234 148 468 479

Family's Representative Sequence

Representative Sequence 3300026116|Ga0207674_10066727|Ga0207674_100667274
Length 483
Sequence MTLSVALNFSTLTTFAEPDDHQRIADLEAYVSNGARGSDATDAKVSSKLDGVPGPGHNAWMMASAALVLFMTLPGLALFYGGLVRRKNVLSVLAQCLGITGLVSILWWAFGYSFVFGDGAGPVIGSFTKFGFLKDVTSAPNTNYSYWVSHNVFSMYQMMFAIITPALIIGAIAERMKFSAILVFMTLWMIVVYFPLAHMVWGINGLMNGVWNAEAKIRAIDFAGGTVVHMSSGWSALILCLILGKRLGFGKEPMPPHSMVLCMVGTGMLWVGWYGFNAGSAVAADGVAANAFLTTTMATAVASFVWAMAEYITRGKPSVLGFCSGAVAGLVVITPACGFVDSNGAIIIGIVAGLVPYFACWKIKGWLGYDDALDTFGVHAIGGTIGAFLTGVLATAKSGNPNLTDANAAAKANGLAKLIANGGLWIEQVKAIAITLVLAIVGTVIIAYIVKAVVGLRPIPEVESAGLDLSEHGEEGYHATGQL

Samples

Sample ID Description Type Environment
1 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
112 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
147 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
148 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.28
Nodule 0
Rhizoplane 6.41
Rhizosphere 91.45
Stem 0
Stem Tuber 0
Unclassified 10.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207674_10066727 3300026116 Bacteria 3623
2 JGI25406J46586_10000007 3300003203 Bacteria 112227
3 rootH2_10009508 3300003320 Bacteria 78035
4 Ga0065712_10002321 3300005290 Bacteria 9213
5 Ga0065712_10012980 3300005290 Unclassified 2168
6 Ga0065712_10087342 3300005290 Bacteria 2583
7 Ga0065715_10089120 3300005293 Bacteria 14004
8 Ga0070676_10007373 3300005328 Bacteria 5901
9 Ga0070683_100012016 3300005329 Bacteria 7511
10 Ga0068868_100059336 3300005338 Bacteria 3026
11 Ga0070660_100015329 3300005339 Bacteria 5532
12 Ga0070689_100004406 3300005340 Bacteria 9506
13 Ga0070687_100025251 3300005343 Unclassified 2848
14 Ga0070661_100013443 3300005344 Bacteria 5745
15 Ga0070668_100019773 3300005347 Bacteria 5071
16 Ga0070669_100005150 3300005353 Bacteria 9453
17 Ga0070675_100006263 3300005354 Bacteria 9133
18 Ga0070675_100009766 3300005354 Bacteria 7474
19 Ga0070675_100170466 3300005354 Bacteria 1876
20 Ga0070673_100006810 3300005364 Bacteria 7465
21 Ga0070688_100003202 3300005365 Bacteria 8387
22 Ga0070659_100002040 3300005366 Bacteria 14439
23 Ga0070659_100032883 3300005366 Unclassified 4027
24 Ga0070659_100044668 3300005366 Bacteria 3470
25 Ga0070714_100156122 3300005435 Bacteria 2060
26 Ga0070713_100077536 3300005436 Bacteria 2826
27 Ga0070713_100167256 3300005436 Unclassified 1967
28 Ga0070710_10009787 3300005437 Bacteria 4696
29 Ga0070705_100052686 3300005440 Bacteria 2379
30 Ga0070708_100001155 3300005445 Bacteria 20303
31 Ga0070708_100053951 3300005445 Bacteria 3569
32 Ga0070708_100062100 3300005445 Unclassified 3340
33 Ga0070662_100005246 3300005457 Bacteria 8267
34 Ga0070681_10146914 3300005458 Bacteria 2286
35 Ga0070706_100000011 3300005467 Bacteria 198585
36 Ga0070706_100023083 3300005467 Bacteria 5729
37 Ga0070706_100060040 3300005467 Bacteria 3510
38 Ga0070706_100063875 3300005467 Bacteria 3402
39 Ga0070707_100002651 3300005468 Bacteria 17008
40 Ga0070707_100005864 3300005468 Bacteria 11453
41 Ga0070707_100083115 3300005468 Bacteria 3094
42 Ga0070707_100138170 3300005468 Unclassified 2371
43 Ga0070698_100004137 3300005471 Bacteria 15959
44 Ga0070698_100024041 3300005471 Bacteria 6361
45 Ga0070698_100064903 3300005471 Bacteria 3677
46 Ga0070698_100074824 3300005471 Bacteria 3392
47 Ga0070699_100133520 3300005518 Bacteria 2189
48 Ga0070699_100159399 3300005518 Bacteria 1997
49 Ga0070679_100049690 3300005530 Bacteria 4177
50 Ga0070684_100000702 3300005535 Bacteria 23117
51 Ga0070684_100001635 3300005535 Bacteria 16223
52 Ga0070684_100185944 3300005535 Bacteria 1889
53 Ga0070697_100008391 3300005536 Bacteria 8062
54 Ga0070697_100011078 3300005536 Bacteria 7046
55 Ga0070697_100020329 3300005536 Bacteria 5251
56 Ga0070697_100023681 3300005536 Bacteria 4885
57 Ga0070697_100085979 3300005536 Bacteria 2594
58 Ga0070672_100086465 3300005543 Bacteria 2521
59 Ga0070696_100032170 3300005546 Unclassified 3598
60 Ga0070704_100001423 3300005549 Bacteria 12770
61 Ga0070664_100057051 3300005564 Bacteria 3319
62 Ga0068857_100052228 3300005577 Bacteria 3626
63 Ga0068864_100040077 3300005618 Bacteria 4006
64 Ga0068866_10083366 3300005718 Bacteria 1722
65 Ga0068863_100006995 3300005841 Bacteria 11058
66 Ga0068863_100014641 3300005841 Bacteria 7551
67 Ga0068863_100034867 3300005841 Bacteria 4793
68 Ga0068860_100000427 3300005843 Bacteria 53819
69 Ga0068860_100007856 3300005843 Bacteria 10649
70 Ga0068860_100098018 3300005843 Unclassified 2795
71 Ga0081455_10000534 3300005937 Bacteria 49314
72 Ga0081455_10000645 3300005937 Bacteria 45201
73 Ga0081455_10051413 3300005937 Bacteria 3535
74 Ga0081540_1001582 3300005983 Bacteria 19461
75 Ga0081540_1032702 3300005983 Bacteria 2836
76 Ga0081539_10000014 3300005985 Bacteria 411270
77 Ga0070717_10002634 3300006028 Bacteria 12639
78 Ga0070717_10042932 3300006028 Unclassified 3689
79 Ga0070717_10048177 3300006028 Bacteria 3494
80 Ga0070717_10066682 3300006028 Bacteria 2994
81 Ga0070717_10084344 3300006028 Bacteria 2672
82 Ga0070712_100019819 3300006175 Bacteria 4395
83 Ga0070712_100081959 3300006175 Unclassified 2339
84 Ga0068865_100058910 3300006881 Bacteria 2684
85 Ga0111539_10174882 3300009094 Bacteria 2508
86 Ga0105245_10066227 3300009098 Bacteria 3269
87 Ga0114129_10004759 3300009147 Bacteria 19181
88 Ga0105243_10054058 3300009148 Unclassified 3187
89 Ga0105249_10007486 3300009553 Bacteria 9526
90 Ga0105249_10055653 3300009553 Bacteria 3620
91 Ga0099796_10003110 3300010159 Bacteria 3786
92 Ga0105239_10009891 3300010375 Bacteria 10712
93 Ga0105239_10019721 3300010375 Bacteria 7442
94 Ga0105239_10155061 3300010375 Bacteria 2557
95 Ga0157371_10144707 3300013102 Bacteria 1693
96 Ga0157369_10036594 3300013105 Bacteria 5376
97 Ga0157374_10024440 3300013296 Bacteria 5419
98 Ga0157374_10117039 3300013296 Unclassified 2568
99 Ga0157378_10018178 3300013297 Bacteria 6171
100 Ga0157378_10059019 3300013297 Unclassified 3423
101 Ga0163162_10074195 3300013306 Unclassified 3460
102 Ga0163162_10093437 3300013306 Unclassified 3093
103 Ga0157372_10097349 3300013307 Bacteria 3355
104 Ga0157375_10008473 3300013308 Bacteria 9008
105 Ga0163163_10000065 3300014325 Bacteria 115460
106 Ga0163163_10082642 3300014325 Bacteria 3216
107 Ga0157379_10018689 3300014968 Bacteria 6111
108 Ga0157376_10102965 3300014969 Bacteria 2499
109 Ga0207666_1000859 3300025271 Bacteria 3643
110 Ga0207673_1001898 3300025290 Bacteria 2335
111 Ga0209050_1000369 3300025298 Bacteria 86187
112 Ga0207697_10000330 3300025315 Bacteria 26448
113 Ga0207697_10000775 3300025315 Bacteria 18082
114 Ga0207697_10001504 3300025315 Bacteria 12684
115 Ga0207642_10052866 3300025899 Bacteria 1845
116 Ga0207645_10011264 3300025907 Bacteria 6113
117 Ga0207645_10012310 3300025907 Bacteria 5806
118 Ga0207684_10000052 3300025910 Bacteria 228510
119 Ga0207684_10037043 3300025910 Bacteria 4140
120 Ga0207693_10006686 3300025915 Bacteria 9522
121 Ga0207693_10010976 3300025915 Bacteria 7341
122 Ga0207693_10014960 3300025915 Bacteria 6231
123 Ga0207693_10038033 3300025915 Bacteria 3790
124 Ga0207693_10049088 3300025915 Bacteria 3314
125 Ga0207662_10006915 3300025918 Bacteria 6150
126 Ga0207657_10017108 3300025919 Bacteria 6968
127 Ga0207657_10090774 3300025919 Bacteria 2549
128 Ga0207646_10000363 3300025922 Bacteria 61054
129 Ga0207646_10001722 3300025922 Bacteria 26594
130 Ga0207646_10003965 3300025922 Bacteria 16416
131 Ga0207646_10157082 3300025922 Bacteria 2052
132 Ga0207681_10058789 3300025923 Unclassified 2633
133 Ga0207659_10012553 3300025926 Bacteria 5394
134 Ga0207659_10016432 3300025926 Bacteria 4817
135 Ga0207659_10033563 3300025926 Bacteria 3533
136 Ga0207700_10009529 3300025928 Bacteria 6074
137 Ga0207700_10099370 3300025928 Bacteria 2317
138 Ga0207664_10094123 3300025929 Bacteria 2462
139 Ga0207664_10173162 3300025929 Bacteria 1849
140 Ga0207706_10002655 3300025933 Bacteria 17419
141 Ga0207670_10003116 3300025936 Bacteria 8772
142 Ga0207665_10014195 3300025939 Bacteria 5241
143 Ga0207665_10024219 3300025939 Bacteria 4001
144 Ga0207691_10022526 3300025940 Bacteria 5939
145 Ga0207661_10140062 3300025944 Bacteria 2081
146 Ga0207679_10055650 3300025945 Bacteria 2917
147 Ga0207712_10029667 3300025961 Bacteria 3672
148 Ga0207658_10029903 3300025986 Unclassified 3852
149 Ga0207658_10082571 3300025986 Bacteria 2468
150 Ga0207677_10027762 3300026023 Unclassified 3571
151 Ga0207678_10016698 3300026067 Bacteria 6447
152 Ga0207678_10023799 3300026067 Bacteria 5356
153 Ga0207708_10017917 3300026075 Bacteria 5330
154 Ga0207702_10000584 3300026078 Bacteria 40502
155 Ga0207641_10005013 3300026088 Bacteria 11353
156 Ga0207641_10030899 3300026088 Bacteria 4439
157 Ga0207675_100095026 3300026118 Bacteria 2804
158 Ga0207683_10011635 3300026121 Bacteria 7511
159 Ga0207683_10056082 3300026121 Bacteria 3455
160 Ga0207683_10124600 3300026121 Bacteria 2315
161 Ga0268266_10047880 3300028379 Bacteria 3664
162 Ga0268264_10001607 3300028381 Bacteria 20904
163 Ga0268264_10011538 3300028381 Bacteria 7301
164 Ga0268264_10041998 3300028381 Unclassified 3783
165 Ga0265318_10000157 3300028577 Bacteria 60876
166 Ga0265338_10034450 3300028800 Bacteria 4893
167 Ga0265320_10000199 3300031240 Bacteria 49328
168 Ga0265327_10002358 3300031251 Bacteria 20127
169 Ga0307509_10104457 3300031507 Bacteria 2858
170 Ga0307408_100000009 3300031548 Bacteria 426576
171 Ga0307408_100000017 3300031548 Bacteria 355890
172 Ga0307410_10000025 3300031852 Bacteria 58385
173 Ga0307410_10000054 3300031852 Bacteria 40692
174 Ga0307416_100000034 3300032002 Bacteria 155632
175 Ga0307416_100057187 3300032002 Bacteria 3153
176 Ga0373945_0016076 3300035116 Bacteria 2521
177 Ga0373935_0025314 3300035692 Bacteria 3657
178 Ga0373935_0115480 3300035692 Bacteria 1787
179 Ga0395900_0055946 3300037418 Bacteria 4061
180 Ga0395898_0002261 3300037466 Bacteria 23349
181 Ga0395905_0020350 3300037471 Bacteria 6286
182 Ga0395905_0102206 3300037471 Bacteria 2691
183 Ga0395901_0000910 3300038443 Bacteria 32308
184 Ga0395901_0110765 3300038443 Bacteria 2883
185 Ga0439443_007180 3300042003 Bacteria 1545
186 Ga0439455_0009312 3300042012 Bacteria 2127
187 Ga0451577_0066147 3300042876 Bacteria 3224
188 Ga0453684_0104885 3300044712 Bacteria 3449
189 Ga0451576_0110909 3300045051 Unclassified 2855
190 Ga0495662_0064099 3300046476 Unclassified 1776
191 Ga0495630_0000054 3300046517 Bacteria 91921
192 Ga0495666_0024512 3300046526 Bacteria 2980
193 Ga0495640_0005914 3300046533 Bacteria 9702
194 Ga0495586_0000014 3300046535 Bacteria 131102
195 Ga0495586_0049653 3300046535 Bacteria 2268
196 Ga0495634_0022102 3300046642 Bacteria 4485
197 Ga0495634_0060174 3300046642 Bacteria 2528
198 Ga0495599_0037026 3300046678 Bacteria 3065
199 Ga0495674_0000985 3300047319 Bacteria 27367
200 Ga0495674_0054221 3300047319 Bacteria 3522
201 Ga0495676_0193624 3300047321 Unclassified 1417
202 Ga0495684_0010968 3300047471 Bacteria 7003
203 Ga0496101_0067098 3300048904 Bacteria 2618
204 Ga0496104_0093647 3300048907 Bacteria 2874
205 Ga0496105_0129843 3300048908 Bacteria 2078
206 Ga0496107_0065341 3300048910 Bacteria 2637
207 Ga0496109_0026128 3300048912 Bacteria 5205
208 Ga0496109_0056781 3300048912 Bacteria 3572
209 Ga0496112_0057450 3300048915 Unclassified 3831
210 Ga0496113_0008769 3300048916 Bacteria 6605
211 Ga0496113_0072046 3300048916 Bacteria 2629
212 Ga0496113_0211610 3300048916 Bacteria 1544
213 Ga0496114_0010598 3300048917 Bacteria 7335
214 Ga0496115_0019510 3300048918 Bacteria 5218
215 Ga0496115_0020540 3300048918 Bacteria 5095
216 Ga0496115_0024706 3300048918 Bacteria 4673
217 Ga0496115_0262933 3300048918 Bacteria 1419
218 Ga0501034_0275662 3300049571 Bacteria 1622
219 Ga0501037_0000145 3300049573 Bacteria 66010
220 Ga0501038_0002285 3300049574 Bacteria 17825
221 Ga0501038_0021771 3300049574 Bacteria 5753
222 Ga0501039_0007819 3300049575 Bacteria 8153
223 Ga0501043_0011092 3300049579 Bacteria 7057
224 Ga0501047_0002610 3300049581 Bacteria 17160
225 Ga0501070_0001390 3300049586 Bacteria 21673
226 Ga0501243_000171 3300049675 Bacteria 7556
227 Ga0501035_0000002 3300049822 Bacteria 585447
228 Ga0501044_0016559 3300049823 Bacteria 7912
229 Ga0501044_0052498 3300049823 Bacteria 4201
230 nmdc:mga0rr50_210256_c1 3300050513 Unclassified 1602
231 nmdc:mga0rr50_214383_c1 3300050513 Unclassified 1587
232 Ga0495601_0014210 3300053077 Bacteria 4797
233 Ga0500588_0016679 3300053146 Bacteria 1905
234 Ga0500622_0004397 3300053156 Bacteria 8878
235 Ga0207674_10066727
236 JGI25406J46586_10000007
237 rootH2_10009508
238 Ga0065712_10002321
239 Ga0065712_10012980
240 Ga0065712_10087342
241 Ga0065715_10089120
242 Ga0070676_10007373
243 Ga0070683_100012016
244 Ga0068868_100059336
245 Ga0070660_100015329
246 Ga0070689_100004406
247 Ga0070687_100025251
248 Ga0070661_100013443
249 Ga0070668_100019773
250 Ga0070669_100005150
251 Ga0070675_100006263
252 Ga0070675_100009766
253 Ga0070675_100170466
254 Ga0070673_100006810
255 Ga0070688_100003202
256 Ga0070659_100002040
257 Ga0070659_100032883
258 Ga0070659_100044668
259 Ga0070714_100156122
260 Ga0070713_100077536
261 Ga0070713_100167256
262 Ga0070710_10009787
263 Ga0070705_100052686
264 Ga0070708_100001155
265 Ga0070708_100053951
266 Ga0070708_100062100
267 Ga0070662_100005246
268 Ga0070681_10146914
269 Ga0070706_100000011
270 Ga0070706_100023083
271 Ga0070706_100060040
272 Ga0070706_100063875
273 Ga0070707_100002651
274 Ga0070707_100005864
275 Ga0070707_100083115
276 Ga0070707_100138170
277 Ga0070698_100004137
278 Ga0070698_100024041
279 Ga0070698_100064903
280 Ga0070698_100074824
281 Ga0070699_100133520
282 Ga0070699_100159399
283 Ga0070679_100049690
284 Ga0070684_100000702
285 Ga0070684_100001635
286 Ga0070684_100185944
287 Ga0070697_100008391
288 Ga0070697_100011078
289 Ga0070697_100020329
290 Ga0070697_100023681
291 Ga0070697_100085979
292 Ga0070672_100086465
293 Ga0070696_100032170
294 Ga0070704_100001423
295 Ga0070664_100057051
296 Ga0068857_100052228
297 Ga0068864_100040077
298 Ga0068866_10083366
299 Ga0068863_100006995
300 Ga0068863_100014641
301 Ga0068863_100034867
302 Ga0068860_100000427
303 Ga0068860_100007856
304 Ga0068860_100098018
305 Ga0081455_10000534
306 Ga0081455_10000645
307 Ga0081455_10051413
308 Ga0081540_1001582
309 Ga0081540_1032702
310 Ga0081539_10000014
311 Ga0070717_10002634
312 Ga0070717_10042932
313 Ga0070717_10048177
314 Ga0070717_10066682
315 Ga0070717_10084344
316 Ga0070712_100019819
317 Ga0070712_100081959
318 Ga0068865_100058910
319 Ga0111539_10174882
320 Ga0105245_10066227
321 Ga0114129_10004759
322 Ga0105243_10054058
323 Ga0105249_10007486
324 Ga0105249_10055653
325 Ga0099796_10003110
326 Ga0105239_10009891
327 Ga0105239_10019721
328 Ga0105239_10155061
329 Ga0157371_10144707
330 Ga0157369_10036594
331 Ga0157374_10024440
332 Ga0157374_10117039
333 Ga0157378_10018178
334 Ga0157378_10059019
335 Ga0163162_10074195
336 Ga0163162_10093437
337 Ga0157372_10097349
338 Ga0157375_10008473
339 Ga0163163_10000065
340 Ga0163163_10082642
341 Ga0157379_10018689
342 Ga0157376_10102965
343 Ga0207666_1000859
344 Ga0207673_1001898
345 Ga0209050_1000369
346 Ga0207697_10000330
347 Ga0207697_10000775
348 Ga0207697_10001504
349 Ga0207642_10052866
350 Ga0207645_10011264
351 Ga0207645_10012310
352 Ga0207684_10000052
353 Ga0207684_10037043
354 Ga0207693_10006686
355 Ga0207693_10010976
356 Ga0207693_10014960
357 Ga0207693_10038033
358 Ga0207693_10049088
359 Ga0207662_10006915
360 Ga0207657_10017108
361 Ga0207657_10090774
362 Ga0207646_10000363
363 Ga0207646_10001722
364 Ga0207646_10003965
365 Ga0207646_10157082
366 Ga0207681_10058789
367 Ga0207659_10012553
368 Ga0207659_10016432
369 Ga0207659_10033563
370 Ga0207700_10009529
371 Ga0207700_10099370
372 Ga0207664_10094123
373 Ga0207664_10173162
374 Ga0207706_10002655
375 Ga0207670_10003116
376 Ga0207665_10014195
377 Ga0207665_10024219
378 Ga0207691_10022526
379 Ga0207661_10140062
380 Ga0207679_10055650
381 Ga0207712_10029667
382 Ga0207658_10029903
383 Ga0207658_10082571
384 Ga0207677_10027762
385 Ga0207678_10016698
386 Ga0207678_10023799
387 Ga0207708_10017917
388 Ga0207702_10000584
389 Ga0207641_10005013
390 Ga0207641_10030899
391 Ga0207675_100095026
392 Ga0207683_10011635
393 Ga0207683_10056082
394 Ga0207683_10124600
395 Ga0268266_10047880
396 Ga0268264_10001607
397 Ga0268264_10011538
398 Ga0268264_10041998
399 Ga0265318_10000157
400 Ga0265338_10034450
401 Ga0265320_10000199
402 Ga0265327_10002358
403 Ga0307509_10104457
404 Ga0307408_100000009
405 Ga0307408_100000017
406 Ga0307410_10000025
407 Ga0307410_10000054
408 Ga0307416_100000034
409 Ga0307416_100057187
410 Ga0373945_0016076
411 Ga0373935_0025314
412 Ga0373935_0115480
413 Ga0395900_0055946
414 Ga0395898_0002261
415 Ga0395905_0020350
416 Ga0395905_0102206
417 Ga0395901_0000910
418 Ga0395901_0110765
419 Ga0439443_007180
420 Ga0439455_0009312
421 Ga0451577_0066147
422 Ga0453684_0104885
423 Ga0451576_0110909
424 Ga0495662_0064099
425 Ga0495630_0000054
426 Ga0495666_0024512
427 Ga0495640_0005914
428 Ga0495586_0000014
429 Ga0495586_0049653
430 Ga0495634_0022102
431 Ga0495634_0060174
432 Ga0495599_0037026
433 Ga0495674_0000985
434 Ga0495674_0054221
435 Ga0495676_0193624
436 Ga0495684_0010968
437 Ga0496101_0067098
438 Ga0496104_0093647
439 Ga0496105_0129843
440 Ga0496107_0065341
441 Ga0496109_0026128
442 Ga0496109_0056781
443 Ga0496112_0057450
444 Ga0496113_0008769
445 Ga0496113_0072046
446 Ga0496113_0211610
447 Ga0496114_0010598
448 Ga0496115_0019510
449 Ga0496115_0020540
450 Ga0496115_0024706
451 Ga0496115_0262933
452 Ga0501034_0275662
453 Ga0501037_0000145
454 Ga0501038_0002285
455 Ga0501038_0021771
456 Ga0501039_0007819
457 Ga0501043_0011092
458 Ga0501047_0002610
459 Ga0501070_0001390
460 Ga0501243_000171
461 Ga0501035_0000002
462 Ga0501044_0016559
463 Ga0501044_0052498
464 nmdc:mga0rr50_210256_c1
465 nmdc:mga0rr50_214383_c1
466 Ga0495601_0014210
467 Ga0500588_0016679
468 Ga0500622_0004397

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00909

Ammonium_transp

Ammonium Transporter Family

59

477

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b2f-assembly1.cif.gz_A ammonium transporter amt-1 from a.fulgidus (native) 0.9435 63 474
2npe-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.9369 64 460
2npg-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.9368 64 460
2now-assembly1.cif.gz_A-3 an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.9345 64 460
1xqe-assembly1.cif.gz_A the mechanism of ammonia transport based on the crystal structure of amtb of e. coli. 0.9344 64 460
ID Description Score Start End Superfamily
2b2hA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9433 63 474 1.10.3430.10
af_Q2FWL9_1_414_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9318 64 474 1.10.3430.10
2npdA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9281 64 460 1.10.3430.10
2b2hA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9223 63 474 1.10.3430.10
af_Q4DC59_3_424_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9122 64 474 1.10.3430.10
ID Description Score Start End GO Terms
AF-A0A7J5EJH2-F1-model_v4 Ammonium transporter 0.9759 95 474 GO:0005886
GO:0008519
AF-A0A3D3L927-F1-model_v4 Ammonium transporter 0.9624 75 474 GO:0005886
GO:0008519
AF-A0A522YD66-F1-model_v4 Ammonium transporter 0.9574 65 207 GO:0005886
GO:0008519
AF-A0A534L770-F1-model_v4 Ammonium transporter 0.9567 63 326 GO:0005886
GO:0008519
AF-A0A1A3GLR4-F1-model_v4 Ammonium transporter 0.9554 62 405 GO:0005886
GO:0008519

Map