F347572
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 234 | 159 | 468 | 279 |
Family's Representative Sequence
| Representative Sequence | 3300053136|Ga0500559_0010951|Ga0500559_0010951_1899_2822 |
| Length | 307 |
| Sequence | MAWAPSCSPPRPSTRSIARPPPPADFRSSFVFEKTYYATHPDMMECVSNEELRDRYLVGDIFRTGEIVLTYSHGERFIIGGVVPGATPLDLPRPTEPASAAGHPLLERRELGIVNIGGPGTVTVDGDTIELAKFESLYVPMGTADVTFAGEGARFYLLSVPAHRAFPRKKMTLADAATMQRGSLETSNERDIYQLVLPHTTSSASLCLGMTLLKPGSVWNTMPPHVHERRSEIYLYFDLAEDDRIFHYMGHPDALRHIVMENEQAVISPPWSVHMGSGTRNYAFIWAMAGENLDYEDMDVKDVCQLR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 2 | 3300000041 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere | Metagenome | Rhizosphere |
| 3 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 4 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 5 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 6 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 7 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 8 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 10 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 11 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 15 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 26 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 27 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 30 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 31 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 32 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 34 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 45 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 46 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 47 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 50 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 77 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 81 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 82 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 83 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 84 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 85 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 86 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 87 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 88 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 89 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 90 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 91 | 3300041410 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 | Metagenome | Rhizosphere |
| 92 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 93 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 94 | 3300041460 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG | Metagenome | Rhizoplane |
| 95 | 3300041498 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG | Metagenome | Unclassified |
| 96 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 97 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 98 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 99 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 100 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 101 | 3300042012 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 | Metagenome | Rhizosphere |
| 102 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 103 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 104 | 3300042122 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 | Metagenome | Rhizosphere |
| 105 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 106 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 107 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 108 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 127 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 128 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 129 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 130 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 131 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 132 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 133 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 134 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 135 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 136 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 137 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 138 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049679 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought | Metagenome | Rhizosphere |
| 142 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 145 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 146 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 147 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 148 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 149 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 150 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 151 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 152 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 153 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 154 | 2599185354 | Sphingomonas sp. NFR15 | Isolate | Rhizoplane |
| 155 | 2643221560 | Sphingopyxis sp. Root1497 | Isolate | Unclassified |
| 156 | 2643221622 | Sphingomonas sp. Root241 | Isolate | Unclassified |
| 157 | 2751185897 | Sphingomonas panacis DCY99 | Isolate | Unclassified |
| 158 | 2818991438 | Novosphingobium barchaimii 1192 | Isolate | Unclassified |
| 159 | 2848297114 | Croceibacterium ferulae EGI 63111 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.44 |
| Metatranscriptomes | 0 |
| Isolates | 2.56 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.97 |
| Nodule | 0.85 |
| Rhizoplane | 1.71 |
| Rhizosphere | 71.79 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0500559_0010951 | 3300053136 | Bacteria | 3884 |
| 2 | ARcpr5oldR_c003222 | 3300000041 | Bacteria | 1460 |
| 3 | JGI24739J22299_10007934 | 3300001989 | Bacteria | 3972 |
| 4 | JGI24739J22299_10018327 | 3300001989 | Bacteria | 2517 |
| 5 | JGI24735J21928_10007241 | 3300002067 | Bacteria | 3620 |
| 6 | JGI24735J21928_10053446 | 3300002067 | Bacteria | 1164 |
| 7 | rootL2_10121713 | 3300003322 | Bacteria | 1860 |
| 8 | Ga0055524_1000335 | 3300003775 | Bacteria | 43434 |
| 9 | Ga0055536_1004418 | 3300003781 | Bacteria | 7199 |
| 10 | Ga0055531_10001326 | 3300003794 | Bacteria | 18512 |
| 11 | Ga0065165_1001320 | 3300005262 | Bacteria | 27647 |
| 12 | Ga0065704_10001326 | 3300005289 | Bacteria | 14211 |
| 13 | Ga0070658_10000542 | 3300005327 | Bacteria | 32750 |
| 14 | Ga0070658_10000685 | 3300005327 | Bacteria | 29323 |
| 15 | Ga0070666_10004680 | 3300005335 | Bacteria | 8359 |
| 16 | Ga0070666_10008824 | 3300005335 | Bacteria | 6268 |
| 17 | Ga0070666_10018248 | 3300005335 | Bacteria | 4508 |
| 18 | Ga0070680_100003722 | 3300005336 | Bacteria | 11394 |
| 19 | Ga0068868_100209836 | 3300005338 | Bacteria | 1627 |
| 20 | Ga0070660_100000459 | 3300005339 | Bacteria | 27142 |
| 21 | Ga0070660_100004524 | 3300005339 | Bacteria | 9611 |
| 22 | Ga0070660_100133519 | 3300005339 | Bacteria | 1988 |
| 23 | Ga0070671_100002504 | 3300005355 | Bacteria | 14225 |
| 24 | Ga0070671_100021845 | 3300005355 | Bacteria | 5227 |
| 25 | Ga0070667_100006938 | 3300005367 | Bacteria | 9411 |
| 26 | Ga0070667_100175167 | 3300005367 | Bacteria | 1895 |
| 27 | Ga0070714_100009446 | 3300005435 | Bacteria | 7669 |
| 28 | Ga0070662_100018614 | 3300005457 | Bacteria | 4701 |
| 29 | Ga0068853_100065684 | 3300005539 | Bacteria | 3148 |
| 30 | Ga0068853_100195812 | 3300005539 | Bacteria | 1838 |
| 31 | Ga0070665_100152019 | 3300005548 | Bacteria | 2317 |
| 32 | Ga0068855_100000183 | 3300005563 | Bacteria | 80725 |
| 33 | Ga0068855_100499116 | 3300005563 | Bacteria | 1322 |
| 34 | Ga0068856_100193153 | 3300005614 | Bacteria | 2049 |
| 35 | Ga0068856_100486574 | 3300005614 | Bacteria | 1255 |
| 36 | Ga0068859_100036737 | 3300005617 | Bacteria | 4918 |
| 37 | Ga0068859_100242495 | 3300005617 | Bacteria | 1892 |
| 38 | Ga0068861_100125787 | 3300005719 | Bacteria | 2074 |
| 39 | Ga0068863_100002917 | 3300005841 | Bacteria | 16960 |
| 40 | Ga0068863_100042754 | 3300005841 | Bacteria | 4305 |
| 41 | Ga0068858_100000776 | 3300005842 | Bacteria | 33350 |
| 42 | Ga0068858_100035882 | 3300005842 | Bacteria | 4598 |
| 43 | Ga0068860_100004593 | 3300005843 | Bacteria | 14094 |
| 44 | Ga0068860_100068409 | 3300005843 | Bacteria | 3374 |
| 45 | Ga0068862_100113883 | 3300005844 | Bacteria | 2377 |
| 46 | Ga0081539_10007880 | 3300005985 | Bacteria | 9498 |
| 47 | Ga0075364_10031047 | 3300006051 | Bacteria | 3432 |
| 48 | Ga0097620_100036737 | 3300006931 | Bacteria | 4918 |
| 49 | Ga0097620_100242497 | 3300006931 | Bacteria | 1892 |
| 50 | Ga0079104_1010067 | 3300006946 | Bacteria | 3147 |
| 51 | Ga0105240_10154227 | 3300009093 | Bacteria | 2733 |
| 52 | Ga0105247_10000304 | 3300009101 | Bacteria | 44112 |
| 53 | Ga0105247_10007059 | 3300009101 | Bacteria | 6908 |
| 54 | Ga0105248_10054859 | 3300009177 | Bacteria | 4470 |
| 55 | Ga0105248_10596836 | 3300009177 | Bacteria | 1246 |
| 56 | Ga0105238_10260052 | 3300009551 | Bacteria | 1715 |
| 57 | Ga0105238_10296589 | 3300009551 | Bacteria | 1600 |
| 58 | Ga0105249_10095512 | 3300009553 | Bacteria | 2787 |
| 59 | Ga0105249_10251164 | 3300009553 | Bacteria | 1753 |
| 60 | Ga0157370_10000337 | 3300013104 | Bacteria | 59072 |
| 61 | Ga0163162_10271948 | 3300013306 | Bacteria | 1826 |
| 62 | Ga0163162_10441487 | 3300013306 | Bacteria | 1433 |
| 63 | Ga0163163_10146532 | 3300014325 | Bacteria | 2405 |
| 64 | Ga0163163_10182829 | 3300014325 | Bacteria | 2144 |
| 65 | Ga0157379_10116693 | 3300014968 | Bacteria | 2401 |
| 66 | Ga0157376_10129065 | 3300014969 | Bacteria | 2253 |
| 67 | Ga0209565_1000030 | 3300025263 | Bacteria | 325058 |
| 68 | Ga0209673_1000768 | 3300025273 | Bacteria | 43336 |
| 69 | Ga0209675_1028439 | 3300025291 | Bacteria | 1359 |
| 70 | Ga0209758_1002585 | 3300025297 | Bacteria | 18171 |
| 71 | Ga0209050_1001648 | 3300025298 | Bacteria | 22754 |
| 72 | Ga0209256_1000046 | 3300025299 | Bacteria | 325040 |
| 73 | Ga0209257_1000533 | 3300025304 | Bacteria | 66037 |
| 74 | Ga0209257_1007719 | 3300025304 | Bacteria | 6414 |
| 75 | Ga0207710_10000118 | 3300025900 | Bacteria | 97453 |
| 76 | Ga0207710_10003225 | 3300025900 | Bacteria | 7298 |
| 77 | Ga0207680_10013630 | 3300025903 | Bacteria | 4182 |
| 78 | Ga0207680_10023832 | 3300025903 | Bacteria | 3349 |
| 79 | Ga0207647_10003314 | 3300025904 | Bacteria | 12095 |
| 80 | Ga0207647_10005821 | 3300025904 | Bacteria | 8988 |
| 81 | Ga0207647_10032882 | 3300025904 | Bacteria | 3327 |
| 82 | Ga0207647_10037628 | 3300025904 | Bacteria | 3066 |
| 83 | Ga0207705_10000044 | 3300025909 | Bacteria | 180886 |
| 84 | Ga0207705_10000520 | 3300025909 | Bacteria | 32771 |
| 85 | Ga0207654_10116432 | 3300025911 | Bacteria | 1671 |
| 86 | Ga0207695_10010625 | 3300025913 | Bacteria | 11249 |
| 87 | Ga0207657_10000253 | 3300025919 | Bacteria | 56919 |
| 88 | Ga0207657_10001066 | 3300025919 | Bacteria | 29046 |
| 89 | Ga0207657_10257306 | 3300025919 | Bacteria | 1390 |
| 90 | Ga0207649_10340956 | 3300025920 | Bacteria | 1106 |
| 91 | Ga0207681_10097721 | 3300025923 | Bacteria | 2111 |
| 92 | Ga0207694_10041930 | 3300025924 | Bacteria | 3528 |
| 93 | Ga0207650_10020247 | 3300025925 | Bacteria | 4690 |
| 94 | Ga0207664_10008107 | 3300025929 | Bacteria | 7306 |
| 95 | Ga0207644_10014573 | 3300025931 | Bacteria | 5262 |
| 96 | Ga0207644_10014711 | 3300025931 | Bacteria | 5243 |
| 97 | Ga0207706_10023786 | 3300025933 | Bacteria | 5496 |
| 98 | Ga0207706_10349379 | 3300025933 | Bacteria | 1286 |
| 99 | Ga0207711_10109499 | 3300025941 | Bacteria | 2455 |
| 100 | Ga0207667_10021481 | 3300025949 | Bacteria | 7150 |
| 101 | Ga0207651_10059339 | 3300025960 | Bacteria | 2650 |
| 102 | Ga0207668_10048581 | 3300025972 | Bacteria | 2913 |
| 103 | Ga0207640_10300988 | 3300025981 | Bacteria | 1269 |
| 104 | Ga0207703_10000495 | 3300026035 | Bacteria | 40916 |
| 105 | Ga0207703_10001175 | 3300026035 | Bacteria | 24706 |
| 106 | Ga0207639_10245705 | 3300026041 | Bacteria | 1558 |
| 107 | Ga0207641_10000734 | 3300026088 | Bacteria | 35187 |
| 108 | Ga0207641_10015595 | 3300026088 | Bacteria | 6227 |
| 109 | Ga0207674_10169671 | 3300026116 | Bacteria | 2136 |
| 110 | Ga0207675_100134573 | 3300026118 | Bacteria | 2344 |
| 111 | Ga0207698_10760431 | 3300026142 | Bacteria | 968 |
| 112 | Ga0209281_1007553 | 3300027111 | Bacteria | 2719 |
| 113 | Ga0268266_10117182 | 3300028379 | Bacteria | 2366 |
| 114 | Ga0268265_10024244 | 3300028380 | Bacteria | 4290 |
| 115 | Ga0268264_10000881 | 3300028381 | Bacteria | 31651 |
| 116 | Ga0268264_10181941 | 3300028381 | Bacteria | 1910 |
| 117 | Ga0307515_10061144 | 3300028794 | Bacteria | 5352 |
| 118 | Ga0307515_10282276 | 3300028794 | Bacteria | 1366 |
| 119 | Ga0307511_10024975 | 3300030521 | Bacteria | 5520 |
| 120 | Ga0316177_1023323 | 3300030731 | Bacteria | 2476 |
| 121 | Ga0307508_10003712 | 3300031616 | Bacteria | 15292 |
| 122 | Ga0307414_10041894 | 3300032004 | Bacteria | 3106 |
| 123 | Ga0395899_0021545 | 3300037312 | Bacteria | 4887 |
| 124 | Ga0395900_0001567 | 3300037418 | Bacteria | 27089 |
| 125 | Ga0395900_0003301 | 3300037418 | Bacteria | 17459 |
| 126 | Ga0395898_0032802 | 3300037466 | Bacteria | 5185 |
| 127 | Ga0395898_0429049 | 3300037466 | Bacteria | 1259 |
| 128 | Ga0395905_0000907 | 3300037471 | Bacteria | 38437 |
| 129 | Ga0395905_0049645 | 3300037471 | Bacteria | 3932 |
| 130 | Ga0395901_0005784 | 3300038443 | Bacteria | 12524 |
| 131 | Ga0395901_0007740 | 3300038443 | Bacteria | 10838 |
| 132 | Ga0439436_0027641 | 3300041404 | Bacteria | 1658 |
| 133 | Ga0439461_0000356 | 3300041410 | Bacteria | 6526 |
| 134 | Ga0439466_0029785 | 3300041411 | Bacteria | 1876 |
| 135 | Ga0439465_0000600 | 3300041413 | Bacteria | 10901 |
| 136 | Ga0439465_0002273 | 3300041413 | Bacteria | 6310 |
| 137 | Ga0451802_1740341 | 3300041460 | Bacteria | 2776 |
| 138 | Ga0451841_0801301 | 3300041498 | Bacteria | 1687 |
| 139 | Ga0439431_0000037 | 3300041997 | Bacteria | 19704 |
| 140 | Ga0439431_0044303 | 3300041997 | Bacteria | 1140 |
| 141 | Ga0439442_017188 | 3300042002 | Bacteria | 1492 |
| 142 | Ga0439445_0000827 | 3300042004 | Bacteria | 6540 |
| 143 | Ga0439448_0014125 | 3300042005 | Bacteria | 2406 |
| 144 | Ga0439448_0047335 | 3300042005 | Bacteria | 1402 |
| 145 | Ga0439448_0076721 | 3300042005 | Bacteria | 1118 |
| 146 | Ga0439432_002953 | 3300042006 | Bacteria | 6338 |
| 147 | Ga0439455_0003284 | 3300042012 | Bacteria | 3068 |
| 148 | Ga0439455_0010849 | 3300042012 | Bacteria | 2013 |
| 149 | Ga0439455_0021561 | 3300042012 | Bacteria | 1537 |
| 150 | Ga0439457_016664 | 3300042014 | Bacteria | 1636 |
| 151 | Ga0439462_0000446 | 3300042015 | Bacteria | 8094 |
| 152 | Ga0450920_042456 | 3300042122 | Bacteria | 908 |
| 153 | Ga0439458_0000073 | 3300042157 | Bacteria | 18453 |
| 154 | Ga0439458_0003233 | 3300042157 | Bacteria | 3853 |
| 155 | Ga0439458_0020949 | 3300042157 | Bacteria | 1511 |
| 156 | Ga0439434_0003509 | 3300042435 | Bacteria | 4579 |
| 157 | Ga0439434_0014424 | 3300042435 | Bacteria | 2350 |
| 158 | Ga0466972_0120837 | 3300044658 | Bacteria | 1235 |
| 159 | Ga0495638_0171726 | 3300046460 | Bacteria | 1243 |
| 160 | Ga0495596_0000660 | 3300046500 | Bacteria | 21551 |
| 161 | Ga0495606_0066487 | 3300046507 | Bacteria | 2286 |
| 162 | Ga0495610_0008087 | 3300046512 | Bacteria | 6880 |
| 163 | Ga0495631_0089586 | 3300046518 | Bacteria | 1325 |
| 164 | Ga0495632_0002735 | 3300046519 | Bacteria | 13101 |
| 165 | Ga0495637_0002696 | 3300046520 | Bacteria | 9693 |
| 166 | Ga0495637_0061886 | 3300046520 | Bacteria | 1533 |
| 167 | Ga0495643_0261049 | 3300046522 | Bacteria | 804 |
| 168 | Ga0495633_0000148 | 3300046558 | Bacteria | 93134 |
| 169 | Ga0495633_0006785 | 3300046558 | Bacteria | 6717 |
| 170 | Ga0495668_0000109 | 3300046616 | Bacteria | 132453 |
| 171 | Ga0495611_0022708 | 3300046648 | Bacteria | 2716 |
| 172 | Ga0495625_0000085 | 3300046660 | Bacteria | 151877 |
| 173 | Ga0495625_0010292 | 3300046660 | Bacteria | 7754 |
| 174 | Ga0495670_0000002 | 3300046691 | Bacteria | 601814 |
| 175 | Ga0495670_0000010 | 3300046691 | Bacteria | 174071 |
| 176 | Ga0495670_0002746 | 3300046691 | Bacteria | 8700 |
| 177 | Ga0495671_0082446 | 3300046692 | Bacteria | 1576 |
| 178 | Ga0495683_0034959 | 3300047323 | Bacteria | 2554 |
| 179 | Ga0495687_011829 | 3300047443 | Bacteria | 4661 |
| 180 | Ga0495686_0000055 | 3300047472 | Bacteria | 255566 |
| 181 | Ga0495686_0002962 | 3300047472 | Bacteria | 15162 |
| 182 | Ga0495686_0007371 | 3300047472 | Bacteria | 8252 |
| 183 | Ga0495686_0023475 | 3300047472 | Bacteria | 4067 |
| 184 | Ga0495626_0000927 | 3300048091 | Bacteria | 25721 |
| 185 | Ga0496108_0001293 | 3300048911 | Bacteria | 19659 |
| 186 | Ga0496109_0083611 | 3300048912 | Bacteria | 2944 |
| 187 | Ga0496116_0000011 | 3300048919 | Bacteria | 646953 |
| 188 | Ga0496118_0016575 | 3300048921 | Bacteria | 6755 |
| 189 | Ga0496119_0076080 | 3300048922 | Bacteria | 1948 |
| 190 | Ga0496120_0025201 | 3300048923 | Bacteria | 3695 |
| 191 | Ga0496120_0185479 | 3300048923 | Bacteria | 1018 |
| 192 | Ga0496121_0000391 | 3300048924 | Bacteria | 89610 |
| 193 | Ga0496121_0003339 | 3300048924 | Bacteria | 23035 |
| 194 | Ga0496121_0003496 | 3300048924 | Bacteria | 22338 |
| 195 | Ga0496121_0009381 | 3300048924 | Bacteria | 11263 |
| 196 | Ga0496121_0047242 | 3300048924 | Bacteria | 3675 |
| 197 | Ga0496122_0002941 | 3300048925 | Bacteria | 23245 |
| 198 | Ga0496123_0005213 | 3300048926 | Bacteria | 13203 |
| 199 | Ga0496124_0000188 | 3300048927 | Bacteria | 122361 |
| 200 | Ga0496124_0000631 | 3300048927 | Bacteria | 58432 |
| 201 | Ga0496124_0001834 | 3300048927 | Bacteria | 29339 |
| 202 | Ga0496125_0000509 | 3300048928 | Bacteria | 67449 |
| 203 | Ga0496125_0005615 | 3300048928 | Bacteria | 13850 |
| 204 | Ga0496125_0005824 | 3300048928 | Bacteria | 13542 |
| 205 | Ga0496125_0058165 | 3300048928 | Bacteria | 3124 |
| 206 | Ga0496126_0001728 | 3300048929 | Bacteria | 32405 |
| 207 | Ga0496126_0004448 | 3300048929 | Bacteria | 16753 |
| 208 | Ga0501043_0135493 | 3300049579 | Bacteria | 1929 |
| 209 | Ga0501071_0313056 | 3300049587 | Bacteria | 1191 |
| 210 | Ga0501073_0015915 | 3300049589 | Bacteria | 5451 |
| 211 | Ga0501249_000039 | 3300049679 | Bacteria | 58314 |
| 212 | Ga0501035_0094975 | 3300049822 | Bacteria | 2621 |
| 213 | Ga0501044_0034511 | 3300049823 | Bacteria | 5304 |
| 214 | Ga0501044_0144780 | 3300049823 | Bacteria | 2363 |
| 215 | Ga0500643_009909 | 3300053087 | Bacteria | 3596 |
| 216 | Ga0500644_0020021 | 3300053088 | Bacteria | 1983 |
| 217 | Ga0500644_0071705 | 3300053088 | Unclassified | 1250 |
| 218 | Ga0500644_0104801 | 3300053088 | Bacteria | 1080 |
| 219 | Ga0500583_0042692 | 3300053092 | Bacteria | 2068 |
| 220 | Ga0500562_015911 | 3300053108 | Bacteria | 1932 |
| 221 | Ga0500658_0006451 | 3300053134 | Bacteria | 4352 |
| 222 | Ga0500658_0028445 | 3300053134 | Bacteria | 2169 |
| 223 | Ga0500658_0037262 | 3300053134 | Bacteria | 1934 |
| 224 | Ga0500568_0006426 | 3300053139 | Bacteria | 5899 |
| 225 | Ga0500588_0006578 | 3300053146 | Bacteria | 2640 |
| 226 | Ga0500604_0068265 | 3300053151 | Bacteria | 1129 |
| 227 | Ga0500616_0000575 | 3300053153 | Bacteria | 44655 |
| 228 | Ga0500622_0009224 | 3300053156 | Bacteria | 5473 |
| 229 | 2600203243 | 2599185354 | Bacteria | 4398675 |
| 230 | 2643822241 | 2643221560 | Bacteria | 4801179 |
| 231 | 2644128366 | 2643221622 | Bacteria | 4212502 |
| 232 | 2753766769 | 2751185897 | Bacteria | 5322941 |
| 233 | 2819551609 | 2818991438 | Bacteria | 5793701 |
| 234 | 2848298880 | 2848297114 | Bacteria | 3608511 |
| 235 | Ga0500559_0010951 | |||
| 236 | ARcpr5oldR_c003222 | |||
| 237 | JGI24739J22299_10007934 | |||
| 238 | JGI24739J22299_10018327 | |||
| 239 | JGI24735J21928_10007241 | |||
| 240 | JGI24735J21928_10053446 | |||
| 241 | rootL2_10121713 | |||
| 242 | Ga0055524_1000335 | |||
| 243 | Ga0055536_1004418 | |||
| 244 | Ga0055531_10001326 | |||
| 245 | Ga0065165_1001320 | |||
| 246 | Ga0065704_10001326 | |||
| 247 | Ga0070658_10000542 | |||
| 248 | Ga0070658_10000685 | |||
| 249 | Ga0070666_10004680 | |||
| 250 | Ga0070666_10008824 | |||
| 251 | Ga0070666_10018248 | |||
| 252 | Ga0070680_100003722 | |||
| 253 | Ga0068868_100209836 | |||
| 254 | Ga0070660_100000459 | |||
| 255 | Ga0070660_100004524 | |||
| 256 | Ga0070660_100133519 | |||
| 257 | Ga0070671_100002504 | |||
| 258 | Ga0070671_100021845 | |||
| 259 | Ga0070667_100006938 | |||
| 260 | Ga0070667_100175167 | |||
| 261 | Ga0070714_100009446 | |||
| 262 | Ga0070662_100018614 | |||
| 263 | Ga0068853_100065684 | |||
| 264 | Ga0068853_100195812 | |||
| 265 | Ga0070665_100152019 | |||
| 266 | Ga0068855_100000183 | |||
| 267 | Ga0068855_100499116 | |||
| 268 | Ga0068856_100193153 | |||
| 269 | Ga0068856_100486574 | |||
| 270 | Ga0068859_100036737 | |||
| 271 | Ga0068859_100242495 | |||
| 272 | Ga0068861_100125787 | |||
| 273 | Ga0068863_100002917 | |||
| 274 | Ga0068863_100042754 | |||
| 275 | Ga0068858_100000776 | |||
| 276 | Ga0068858_100035882 | |||
| 277 | Ga0068860_100004593 | |||
| 278 | Ga0068860_100068409 | |||
| 279 | Ga0068862_100113883 | |||
| 280 | Ga0081539_10007880 | |||
| 281 | Ga0075364_10031047 | |||
| 282 | Ga0097620_100036737 | |||
| 283 | Ga0097620_100242497 | |||
| 284 | Ga0079104_1010067 | |||
| 285 | Ga0105240_10154227 | |||
| 286 | Ga0105247_10000304 | |||
| 287 | Ga0105247_10007059 | |||
| 288 | Ga0105248_10054859 | |||
| 289 | Ga0105248_10596836 | |||
| 290 | Ga0105238_10260052 | |||
| 291 | Ga0105238_10296589 | |||
| 292 | Ga0105249_10095512 | |||
| 293 | Ga0105249_10251164 | |||
| 294 | Ga0157370_10000337 | |||
| 295 | Ga0163162_10271948 | |||
| 296 | Ga0163162_10441487 | |||
| 297 | Ga0163163_10146532 | |||
| 298 | Ga0163163_10182829 | |||
| 299 | Ga0157379_10116693 | |||
| 300 | Ga0157376_10129065 | |||
| 301 | Ga0209565_1000030 | |||
| 302 | Ga0209673_1000768 | |||
| 303 | Ga0209675_1028439 | |||
| 304 | Ga0209758_1002585 | |||
| 305 | Ga0209050_1001648 | |||
| 306 | Ga0209256_1000046 | |||
| 307 | Ga0209257_1000533 | |||
| 308 | Ga0209257_1007719 | |||
| 309 | Ga0207710_10000118 | |||
| 310 | Ga0207710_10003225 | |||
| 311 | Ga0207680_10013630 | |||
| 312 | Ga0207680_10023832 | |||
| 313 | Ga0207647_10003314 | |||
| 314 | Ga0207647_10005821 | |||
| 315 | Ga0207647_10032882 | |||
| 316 | Ga0207647_10037628 | |||
| 317 | Ga0207705_10000044 | |||
| 318 | Ga0207705_10000520 | |||
| 319 | Ga0207654_10116432 | |||
| 320 | Ga0207695_10010625 | |||
| 321 | Ga0207657_10000253 | |||
| 322 | Ga0207657_10001066 | |||
| 323 | Ga0207657_10257306 | |||
| 324 | Ga0207649_10340956 | |||
| 325 | Ga0207681_10097721 | |||
| 326 | Ga0207694_10041930 | |||
| 327 | Ga0207650_10020247 | |||
| 328 | Ga0207664_10008107 | |||
| 329 | Ga0207644_10014573 | |||
| 330 | Ga0207644_10014711 | |||
| 331 | Ga0207706_10023786 | |||
| 332 | Ga0207706_10349379 | |||
| 333 | Ga0207711_10109499 | |||
| 334 | Ga0207667_10021481 | |||
| 335 | Ga0207651_10059339 | |||
| 336 | Ga0207668_10048581 | |||
| 337 | Ga0207640_10300988 | |||
| 338 | Ga0207703_10000495 | |||
| 339 | Ga0207703_10001175 | |||
| 340 | Ga0207639_10245705 | |||
| 341 | Ga0207641_10000734 | |||
| 342 | Ga0207641_10015595 | |||
| 343 | Ga0207674_10169671 | |||
| 344 | Ga0207675_100134573 | |||
| 345 | Ga0207698_10760431 | |||
| 346 | Ga0209281_1007553 | |||
| 347 | Ga0268266_10117182 | |||
| 348 | Ga0268265_10024244 | |||
| 349 | Ga0268264_10000881 | |||
| 350 | Ga0268264_10181941 | |||
| 351 | Ga0307515_10061144 | |||
| 352 | Ga0307515_10282276 | |||
| 353 | Ga0307511_10024975 | |||
| 354 | Ga0316177_1023323 | |||
| 355 | Ga0307508_10003712 | |||
| 356 | Ga0307414_10041894 | |||
| 357 | Ga0395899_0021545 | |||
| 358 | Ga0395900_0001567 | |||
| 359 | Ga0395900_0003301 | |||
| 360 | Ga0395898_0032802 | |||
| 361 | Ga0395898_0429049 | |||
| 362 | Ga0395905_0000907 | |||
| 363 | Ga0395905_0049645 | |||
| 364 | Ga0395901_0005784 | |||
| 365 | Ga0395901_0007740 | |||
| 366 | Ga0439436_0027641 | |||
| 367 | Ga0439461_0000356 | |||
| 368 | Ga0439466_0029785 | |||
| 369 | Ga0439465_0000600 | |||
| 370 | Ga0439465_0002273 | |||
| 371 | Ga0451802_1740341 | |||
| 372 | Ga0451841_0801301 | |||
| 373 | Ga0439431_0000037 | |||
| 374 | Ga0439431_0044303 | |||
| 375 | Ga0439442_017188 | |||
| 376 | Ga0439445_0000827 | |||
| 377 | Ga0439448_0014125 | |||
| 378 | Ga0439448_0047335 | |||
| 379 | Ga0439448_0076721 | |||
| 380 | Ga0439432_002953 | |||
| 381 | Ga0439455_0003284 | |||
| 382 | Ga0439455_0010849 | |||
| 383 | Ga0439455_0021561 | |||
| 384 | Ga0439457_016664 | |||
| 385 | Ga0439462_0000446 | |||
| 386 | Ga0450920_042456 | |||
| 387 | Ga0439458_0000073 | |||
| 388 | Ga0439458_0003233 | |||
| 389 | Ga0439458_0020949 | |||
| 390 | Ga0439434_0003509 | |||
| 391 | Ga0439434_0014424 | |||
| 392 | Ga0466972_0120837 | |||
| 393 | Ga0495638_0171726 | |||
| 394 | Ga0495596_0000660 | |||
| 395 | Ga0495606_0066487 | |||
| 396 | Ga0495610_0008087 | |||
| 397 | Ga0495631_0089586 | |||
| 398 | Ga0495632_0002735 | |||
| 399 | Ga0495637_0002696 | |||
| 400 | Ga0495637_0061886 | |||
| 401 | Ga0495643_0261049 | |||
| 402 | Ga0495633_0000148 | |||
| 403 | Ga0495633_0006785 | |||
| 404 | Ga0495668_0000109 | |||
| 405 | Ga0495611_0022708 | |||
| 406 | Ga0495625_0000085 | |||
| 407 | Ga0495625_0010292 | |||
| 408 | Ga0495670_0000002 | |||
| 409 | Ga0495670_0000010 | |||
| 410 | Ga0495670_0002746 | |||
| 411 | Ga0495671_0082446 | |||
| 412 | Ga0495683_0034959 | |||
| 413 | Ga0495687_011829 | |||
| 414 | Ga0495686_0000055 | |||
| 415 | Ga0495686_0002962 | |||
| 416 | Ga0495686_0007371 | |||
| 417 | Ga0495686_0023475 | |||
| 418 | Ga0495626_0000927 | |||
| 419 | Ga0496108_0001293 | |||
| 420 | Ga0496109_0083611 | |||
| 421 | Ga0496116_0000011 | |||
| 422 | Ga0496118_0016575 | |||
| 423 | Ga0496119_0076080 | |||
| 424 | Ga0496120_0025201 | |||
| 425 | Ga0496120_0185479 | |||
| 426 | Ga0496121_0000391 | |||
| 427 | Ga0496121_0003339 | |||
| 428 | Ga0496121_0003496 | |||
| 429 | Ga0496121_0009381 | |||
| 430 | Ga0496121_0047242 | |||
| 431 | Ga0496122_0002941 | |||
| 432 | Ga0496123_0005213 | |||
| 433 | Ga0496124_0000188 | |||
| 434 | Ga0496124_0000631 | |||
| 435 | Ga0496124_0001834 | |||
| 436 | Ga0496125_0000509 | |||
| 437 | Ga0496125_0005615 | |||
| 438 | Ga0496125_0005824 | |||
| 439 | Ga0496125_0058165 | |||
| 440 | Ga0496126_0001728 | |||
| 441 | Ga0496126_0004448 | |||
| 442 | Ga0501043_0135493 | |||
| 443 | Ga0501071_0313056 | |||
| 444 | Ga0501073_0015915 | |||
| 445 | Ga0501249_000039 | |||
| 446 | Ga0501035_0094975 | |||
| 447 | Ga0501044_0034511 | |||
| 448 | Ga0501044_0144780 | |||
| 449 | Ga0500643_009909 | |||
| 450 | Ga0500644_0020021 | |||
| 451 | Ga0500644_0071705 | |||
| 452 | Ga0500644_0104801 | |||
| 453 | Ga0500583_0042692 | |||
| 454 | Ga0500562_015911 | |||
| 455 | Ga0500658_0006451 | |||
| 456 | Ga0500658_0028445 | |||
| 457 | Ga0500658_0037262 | |||
| 458 | Ga0500568_0006426 | |||
| 459 | Ga0500588_0006578 | |||
| 460 | Ga0500604_0068265 | |||
| 461 | Ga0500616_0000575 | |||
| 462 | Ga0500622_0009224 | |||
| 463 | 2600203243 | |||
| 464 | 2643822241 | |||
| 465 | 2644128366 | |||
| 466 | 2753766769 | |||
| 467 | 2819551609 | |||
| 468 | 2848298880 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1ywk-assembly3.cif.gz_C | crystal structure of 4-deoxy-1-threo-5-hexosulose-uronate ketol-isomerase from enterococcus faecalis | 0.9472 | 11 | 268 |
| 1ywk-assembly6.cif.gz_F | crystal structure of 4-deoxy-1-threo-5-hexosulose-uronate ketol-isomerase from enterococcus faecalis | 0.9466 | 11 | 269 |
| 1x8m-assembly1.cif.gz_A | x-ray structure of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase from escherichia coli | 0.9448 | 11 | 270 |
| 1xru-assembly1.cif.gz_A | crystal structure of 5-keto-4-deoxyuronate isomerase from eschericia coli | 0.9373 | 4 | 279 |
| 7yrs-assembly6.cif.gz_F | crystal structure of lactobacillus rhamnosus 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase kdui complexed with mops | 0.936 | 9 | 273 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1x8mA02 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9535 | 150 | 270 | 2.60.120.10 |
| af_Q46938_25_265_2.60.120.10 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9528 | 35 | 270 | 2.60.120.10 |
| 1ywkB00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9465 | 11 | 269 | 2.60.120.10 |
| af_Q46938_25_265_2.60.120.10 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9297 | 35 | 270 | 2.60.120.10 |
| 1ywkB00 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.9283 | 11 | 269 | 2.60.120.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A520ILS7-F1-model_v4 | 5-dehydro-4-deoxy-D-glucuronate isomerase (EC 5.3.1.17) | 0.9834 | 9 | 172 |
GO:0008697
GO:0019698 GO:0042840 GO:0045490 GO:0046872 |
| AF-M2TRN1-F1-model_v4 | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) (5-keto-4-deoxyuronate isomerase) (DKI isomerase) | 0.9776 | 9 | 285 |
GO:0008270
GO:0008697 GO:0019698 GO:0042840 GO:0045490 |
| AF-A0A653YW07-F1-model_v4 | 5-dehydro-4-deoxy-D-glucuronate isomerase (EC 5.3.1.17) | 0.9774 | 9 | 187 |
GO:0008697
GO:0019698 GO:0042840 GO:0045490 GO:0046872 |
| AF-A0A1G3JZ60-F1-model_v4 | 5-dehydro-4-deoxy-D-glucuronate isomerase (EC 5.3.1.17) | 0.977 | 9 | 207 |
GO:0008697
GO:0019698 GO:0042840 GO:0045490 GO:0046872 |
| AF-A0A377DMA9-F1-model_v4 | 5-dehydro-4-deoxy-D-glucuronate isomerase (EC 5.3.1.17) | 0.977 | 138 | 267 |
GO:0008697
GO:0019698 GO:0042840 GO:0045490 GO:0046872 |