F347668

General Info

Members Datasets Scaffolds Average Seq Length
235 178 225 633

Family's Representative Sequence

Representative Sequence 3300002067|JGI24735J21928_10003415|JGI24735J21928_100034152
Length 686
Sequence MIMKEPAGNRGFFHDHNKRDRIRRGRPASCAARVNSAMAASPTAGPLRGLAALALVSSTSTARPTVLTIGALGVVFGDIGTSPLYALQTVFGIDGGAVHPTRGDVFGVISLVFWSVLLIVSVKYVGFIMRADNDGEGGIMALAALIRERVTHRARLVATAMALGVVGAALFFGDSVITPAISVLSAIEGAEVVSPSLKDLVLPVGAVILTILFAAQSFGTERVSKLFGPIMLLWFLALAVLGLPEVIRHPDILEGLSPTYVVSFVADHPYTAFIAMGAVVLSITGAEALYADMGHFGRPPIRRSWFAIVFPALTINYLGQGALILHRPSAIANPFFLLVPNWAQIPMVVLATIATVIASQAVISGAFSVTRQAMRLGFLPRLNIEQTSRHEGGQIYVPSVNWLLYGGVLLLMFAFRSSNKLATAYGLAVTGTLVLTTTLFLILARCAWNWKRRWIVLLAVVFGGLELTFFAANLTKVVHGGWLPVLIGAIVVTVMTTWQAGRRIVTARRQALEGSLAEFVQKVQRDPDVVRIPGAAVFPHPSKTTVPLALRANAEFNRVVHEHVVIVSIHSENVPHVPRSERLSVDPLGSDQDGIVYLSARFGFNDDQNIPMVLRDAFLLTPELEVDPDTALYFLSRITVERGDGDELATWRKLLFIALAHNAANPAAYFSLPAGRTVVMGSTVQL

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2643221616 Leifsonia sp. Root227 Isolate Unclassified
3 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
4 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
5 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
6 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
7 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
8 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
9 2928153084 Leifsonia sp. 563 Isolate Unclassified
10 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
11 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
14 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
15 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
16 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
17 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
18 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
19 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
26 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
63 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
70 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
74 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
112 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
113 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
114 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
115 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
116 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
117 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
118 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
119 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
138 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
178 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.04
Metatranscriptomes 1.7
Isolates 4.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.64
Nodule 0
Rhizoplane 15.32
Rhizosphere 67.66
Stem 0
Stem Tuber 0.43
Unclassified 5.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10003415 3300002067 Bacteria 5416
2 JGI25164J39214_1000376 3300002772 Bacteria 26529
3 JGI25165J46597_1000014 3300003214 Bacteria 390383
4 Ga0006562J51391_1176317 3300003578 Bacteria 3773
5 Ga0055539_1000006 3300003752 Bacteria 580055
6 Ga0055533_1000002 3300003756 Bacteria 1196393
7 Ga0055525_1000241 3300003759 Bacteria 56036
8 Ga0055527_1000003 3300003760 Bacteria 705001
9 Ga0055542_1000005 3300003762 Bacteria 550280
10 Ga0055529_1000006 3300003763 Bacteria 416978
11 Ga0070658_10009274 3300005327 Bacteria 7911
12 Ga0068869_100021397 3300005334 Bacteria 4449
13 Ga0068868_100054799 3300005338 Bacteria 3144
14 Ga0070689_100005546 3300005340 Bacteria 8630
15 Ga0070671_100016561 3300005355 Bacteria 5959
16 Ga0070714_100003557 3300005435 Bacteria 11649
17 Ga0070713_100057826 3300005436 Bacteria 3231
18 Ga0070663_100034299 3300005455 Bacteria 3514
19 Ga0070678_100010101 3300005456 Bacteria 5747
20 Ga0070681_10010713 3300005458 Bacteria 9059
21 Ga0068853_100014631 3300005539 Bacteria 6434
22 Ga0070693_100005299 3300005547 Bacteria 6181
23 Ga0070665_100000891 3300005548 Bacteria 38348
24 Ga0068855_100009285 3300005563 Bacteria 11879
25 Ga0070702_100028206 3300005615 Bacteria 3041
26 Ga0068859_100110884 3300005617 Bacteria 2806
27 Ga0068864_100007592 3300005618 Bacteria 8932
28 Ga0068870_10000371 3300005840 Bacteria 16836
29 Ga0068863_100002854 3300005841 Bacteria 17116
30 Ga0068860_100080366 3300005843 Bacteria 3101
31 Ga0081455_10012846 3300005937 Bacteria 8316
32 Ga0081540_1002784 3300005983 Bacteria 14182
33 Ga0081540_1041872 3300005983 Bacteria 2369
34 Ga0075365_10034019 3300006038 Bacteria 3289
35 Ga0075364_10025742 3300006051 Bacteria 3747
36 Ga0097621_100016929 3300006237 Bacteria 5526
37 Ga0075434_100021210 3300006871 Bacteria 6313
38 Ga0075436_100008040 3300006914 Bacteria 7221
39 Ga0097620_100110884 3300006931 Bacteria 2806
40 Ga0075435_100021165 3300007076 Bacteria 4997
41 Ga0105245_10016554 3300009098 Bacteria 6433
42 Ga0105247_10012661 3300009101 Bacteria 5062
43 Ga0105241_10008383 3300009174 Bacteria 7611
44 Ga0105241_10025093 3300009174 Bacteria 4430
45 Ga0105237_10043717 3300009545 Bacteria 4512
46 Ga0105239_10025036 3300010375 Bacteria 6575
47 Ga0105239_10038046 3300010375 Bacteria 5272
48 Ga0157373_10050401 3300013100 Bacteria 2964
49 Ga0157371_10045772 3300013102 Bacteria 3113
50 Ga0157370_10098421 3300013104 Bacteria 2743
51 Ga0157370_10125165 3300013104 Bacteria 2399
52 Ga0157369_10012580 3300013105 Bacteria 9599
53 Ga0157369_10056764 3300013105 Bacteria 4225
54 Ga0157372_10035820 3300013307 Bacteria 5465
55 Ga0157372_10120988 3300013307 Bacteria 3007
56 Ga0157372_10149573 3300013307 Bacteria 2694
57 Ga0157377_10006486 3300014745 Bacteria 5587
58 Ga0206356_11224331 3300020070 Bacteria 3190
59 Ga0206353_11470232 3300020082 Bacteria 2381
60 Ga0213872_10007053 3300021361 Bacteria 5565
61 Ga0209566_100032 3300025225 Bacteria 338313
62 Ga0209674_100001 3300025226 Bacteria 4013750
63 Ga0209672_100003 3300025228 Bacteria 1560476
64 Ga0209147_100511 3300025229 Bacteria 22600
65 Ga0209563_100001 3300025230 Bacteria 4013775
66 Ga0209563_101064 3300025230 Bacteria 7935
67 Ga0207427_100041 3300025231 Bacteria 263659
68 Ga0209437_100267 3300025233 Bacteria 79455
69 Ga0209258_101396 3300025242 Bacteria 8634
70 Ga0209677_100001 3300025253 Bacteria 4013787
71 Ga0209148_1000004 3300025254 Bacteria 1844481
72 Ga0209233_1000014 3300025261 Bacteria 996641
73 Ga0209455_1000091 3300025272 Bacteria 223115
74 Ga0209455_1003427 3300025272 Bacteria 5616
75 Ga0207656_10022768 3300025321 Bacteria 2517
76 Ga0207688_10002552 3300025901 Bacteria 9842
77 Ga0207680_10038465 3300025903 Bacteria 2769
78 Ga0207643_10000022 3300025908 Bacteria 105173
79 Ga0207705_10029020 3300025909 Bacteria 3945
80 Ga0207654_10012769 3300025911 Bacteria 4310
81 Ga0207707_10011337 3300025912 Bacteria 7760
82 Ga0207695_10063921 3300025913 Bacteria 3792
83 Ga0207660_10004188 3300025917 Bacteria 9386
84 Ga0207657_10021866 3300025919 Bacteria 6007
85 Ga0207649_10012158 3300025920 Bacteria 4767
86 Ga0207652_10007420 3300025921 Bacteria 8840
87 Ga0207650_10003978 3300025925 Bacteria 10112
88 Ga0207659_10003886 3300025926 Bacteria 9006
89 Ga0207687_10004018 3300025927 Bacteria 9857
90 Ga0207700_10002690 3300025928 Bacteria 10244
91 Ga0207644_10004919 3300025931 Bacteria 8709
92 Ga0207689_10011609 3300025942 Bacteria 7547
93 Ga0207661_10002483 3300025944 Bacteria 12682
94 Ga0207667_10017456 3300025949 Bacteria 8075
95 Ga0207639_10008682 3300026041 Bacteria 6975
96 Ga0207678_10001333 3300026067 Bacteria 22773
97 Ga0207708_10007270 3300026075 Bacteria 8186
98 Ga0207702_10001707 3300026078 Bacteria 21665
99 Ga0207641_10002708 3300026088 Bacteria 16163
100 Ga0207676_10003053 3300026095 Bacteria 11947
101 Ga0207683_10000171 3300026121 Bacteria 56009
102 Ga0207428_10010556 3300027907 Bacteria 8245
103 Ga0268266_10002271 3300028379 Bacteria 20888
104 Ga0307511_10005520 3300030521 Bacteria 12849
105 Ga0265320_10002747 3300031240 Bacteria 12163
106 Ga0265314_10029451 3300031711 Bacteria 4080
107 Ga0307416_100094140 3300032002 Bacteria 2582
108 Ga0395899_0009920 3300037312 Bacteria 7303
109 Ga0395900_0008328 3300037418 Bacteria 10676
110 Ga0395898_0000194 3300037466 Bacteria 155846
111 Ga0395898_0059267 3300037466 Bacteria 3725
112 Ga0466972_0007469 3300044658 Bacteria 5493
113 Ga0466965_0056924 3300044683 Bacteria 1948
114 Ga0466965_0069810 3300044683 Bacteria 1766
115 Ga0466966_0048447 3300044684 Bacteria 2707
116 Ga0466966_0054103 3300044684 Bacteria 2545
117 Ga0466961_0032065 3300044693 Bacteria 3377
118 Ga0466961_0044873 3300044693 Bacteria 2828
119 Ga0466961_0055827 3300044693 Bacteria 2517
120 Ga0466961_0059818 3300044693 Bacteria 2422
121 Ga0466961_0107992 3300044693 Bacteria 1752
122 Ga0466963_0003813 3300044694 Bacteria 8692
123 Ga0466963_0043686 3300044694 Bacteria 2948
124 Ga0466963_0067624 3300044694 Bacteria 2398
125 Ga0466971_0007285 3300044719 Bacteria 4817
126 Ga0466970_0029998 3300044765 Bacteria 2867
127 Ga0466957_0039383 3300044842 Bacteria 2851
128 Ga0466957_0074665 3300044842 Bacteria 2103
129 Ga0466960_0001439 3300044901 Bacteria 8680
130 Ga0466960_0024557 3300044901 Bacteria 2720
131 Ga0466960_0039048 3300044901 Bacteria 2237
132 Ga0466959_0022435 3300045049 Bacteria 4667
133 Ga0466959_0027358 3300045049 Bacteria 4231
134 Ga0466967_0001784 3300045976 Bacteria 12888
135 Ga0466967_0005868 3300045976 Bacteria 8595
136 Ga0466967_0036112 3300045976 Bacteria 4216
137 Ga0466967_0038753 3300045976 Bacteria 4090
138 Ga0466967_0181423 3300045976 Bacteria 1986
139 Ga0495650_0026846 3300046471 Bacteria 2670
140 Ga0496100_0043788 3300048903 Bacteria 2864
141 Ga0496100_0052900 3300048903 Bacteria 2642
142 Ga0496101_0055948 3300048904 Bacteria 2851
143 Ga0496101_0078964 3300048904 Bacteria 2429
144 Ga0496102_0000396 3300048905 Bacteria 50858
145 Ga0496102_0014213 3300048905 Bacteria 6917
146 Ga0496102_0022774 3300048905 Bacteria 5552
147 Ga0496102_0054447 3300048905 Bacteria 3648
148 Ga0496104_0000063 3300048907 Bacteria 116618
149 Ga0496104_0002098 3300048907 Bacteria 17313
150 Ga0496104_0007432 3300048907 Bacteria 9683
151 Ga0496104_0009872 3300048907 Bacteria 8520
152 Ga0496104_0042790 3300048907 Bacteria 4253
153 Ga0496104_0131578 3300048907 Bacteria 2403
154 Ga0496105_0000041 3300048908 Bacteria 116618
155 Ga0496105_0006149 3300048908 Bacteria 9202
156 Ga0496105_0030490 3300048908 Bacteria 4419
157 Ga0496105_0050953 3300048908 Bacteria 3420
158 Ga0496105_0103235 3300048908 Bacteria 2354
159 Ga0496106_0011118 3300048909 Bacteria 6657
160 Ga0496107_0066492 3300048910 Bacteria 2614
161 Ga0496108_0004319 3300048911 Bacteria 11428
162 Ga0496109_0011891 3300048912 Bacteria 7493
163 Ga0496109_0023179 3300048912 Bacteria 5507
164 Ga0496109_0038535 3300048912 Bacteria 4322
165 Ga0496110_0006321 3300048913 Bacteria 9357
166 Ga0496110_0013095 3300048913 Bacteria 6847
167 Ga0496111_0014451 3300048914 Bacteria 5393
168 Ga0496111_0053733 3300048914 Bacteria 2910
169 Ga0496112_0025643 3300048915 Bacteria 5662
170 Ga0496112_0072778 3300048915 Bacteria 3398
171 Ga0496113_0002181 3300048916 Bacteria 11296
172 Ga0496113_0015283 3300048916 Bacteria 5271
173 Ga0496114_0010777 3300048917 Bacteria 7275
174 Ga0496114_0015368 3300048917 Bacteria 6154
175 Ga0496114_0074290 3300048917 Bacteria 2861
176 Ga0496117_0006582 3300048920 Bacteria 11684
177 Ga0496119_0007739 3300048922 Bacteria 9596
178 Ga0496121_0040009 3300048924 Bacteria 4120
179 Ga0496121_0050057 3300048924 Bacteria 3535
180 Ga0496122_0001863 3300048925 Bacteria 32114
181 Ga0496123_0016173 3300048926 Bacteria 6073
182 Ga0496126_0012679 3300048929 Bacteria 8625
183 Ga0501310_000323 3300049130 Bacteria 4369
184 Ga0501031_0010032 3300049568 Bacteria 6168
185 Ga0501032_0005259 3300049569 Bacteria 9629
186 Ga0501032_0046319 3300049569 Bacteria 2939
187 Ga0501033_0004270 3300049570 Bacteria 11484
188 Ga0501034_0083118 3300049571 Bacteria 3203
189 Ga0501036_0023771 3300049572 Bacteria 5163
190 Ga0501038_0003344 3300049574 Bacteria 14956
191 Ga0501039_0053223 3300049575 Bacteria 3132
192 Ga0501039_0083972 3300049575 Bacteria 2480
193 Ga0501040_0003119 3300049576 Bacteria 10749
194 Ga0501042_0044074 3300049578 Bacteria 3178
195 Ga0501043_0006434 3300049579 Bacteria 9434
196 Ga0501043_0026513 3300049579 Bacteria 4546
197 Ga0501046_0009940 3300049580 Bacteria 8196
198 Ga0501047_0002035 3300049581 Bacteria 19329
199 Ga0501048_0010220 3300049582 Bacteria 7018
200 Ga0501048_0012283 3300049582 Bacteria 6373
201 Ga0501070_0001204 3300049586 Bacteria 23141
202 Ga0501070_0008577 3300049586 Bacteria 8642
203 Ga0501072_0002007 3300049588 Bacteria 15165
204 Ga0501072_0007556 3300049588 Bacteria 8250
205 Ga0501075_0000801 3300049591 Bacteria 19673
206 Ga0501076_0002220 3300049592 Bacteria 13303
207 Ga0501076_0008771 3300049592 Bacteria 7430
208 Ga0501079_0004522 3300049741 Bacteria 10316
209 Ga0501080_0008919 3300049742 Bacteria 9120
210 Ga0501081_0004906 3300049743 Bacteria 8597
211 Ga0501035_0008255 3300049822 Bacteria 9703
212 Ga0501044_0002034 3300049823 Bacteria 23319
213 Ga0501044_0008605 3300049823 Bacteria 11176
214 Ga0501045_0001442 3300049824 Bacteria 15807
215 nmdc:mga09592_63118_c1 3300050508 Bacteria 3134
216 nmdc:mga08y16_10994_c1 3300050511 Bacteria 9503
217 nmdc:mga0n895_88411_c1 3300050512 Bacteria 3098
218 nmdc:mga0rr50_1732_c1 3300050513 Bacteria 12043
219 nmdc:mga08x19_6011_c1 3300050514 Bacteria 7177
220 nmdc:mga0a205_36784_c1 3300050515 Bacteria 4706
221 Ga0500635_0000037 3300053080 Bacteria 93959
222 Ga0501084_0007358 3300054114 Bacteria 9069
223 Ga0501082_0009693 3300060353 Bacteria 8293
224 Ga0466962_0019207 3300061719 Bacteria 3282
225 Ga0530510_0001038 3300061734 Bacteria 18382

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044683 Ga0466965_0069810 Ga0466965_0069810_94_1740 546
2 3300049588 Ga0501072_0007556 Ga0501072_0007556_4014_5936 547
3 3300049576 Ga0501040_0003119 Ga0501040_0003119_6322_8217 548
4 3300049578 Ga0501042_0044074 Ga0501042_0044074_873_2768 548
5 3300049588 Ga0501072_0002007 Ga0501072_0002007_8153_10048 548
6 3300049591 Ga0501075_0000801 Ga0501075_0000801_12832_14727 548
7 3300049592 Ga0501076_0002220 Ga0501076_0002220_11104_12999 548
8 3300049741 Ga0501079_0004522 Ga0501079_0004522_7196_9091 548
9 3300049742 Ga0501080_0008919 Ga0501080_0008919_7072_8967 548
10 3300049743 Ga0501081_0004906 Ga0501081_0004906_3507_5402 548
11 3300049824 Ga0501045_0001442 Ga0501045_0001442_8967_10862 548
12 3300054114 Ga0501084_0007358 Ga0501084_0007358_6869_8764 548
13 3300060353 Ga0501082_0009693 Ga0501082_0009693_5174_7069 548
14 3300061734 Ga0530510_0001038 Ga0530510_0001038_15664_17559 548
15 3300044693 Ga0466961_0107992 Ga0466961_0107992_12_1691 557
16 3300048907 Ga0496104_0002098 Ga0496104_0002098_9031_10953 558
17 3300048925 Ga0496122_0001863 Ga0496122_0001863_16594_18390 565
18 3300048926 Ga0496123_0016173 Ga0496123_0016173_2310_4106 565
19 3300048912 Ga0496109_0038535 Ga0496109_0038535_2198_4120 567
20 3300044901 Ga0466960_0039048 Ga0466960_0039048_486_2219 575
21 3300048904 Ga0496101_0078964 Ga0496101_0078964_362_2266 576
22 3300048916 Ga0496113_0015283 Ga0496113_0015283_953_2857 576
23 3300048929 Ga0496126_0012679 Ga0496126_0012679_5667_7571 576
24 3300003752 Ga0055539_1000006 Ga0055539_100000655 577
25 3300003756 Ga0055533_1000002 Ga0055533_1000002139 577
26 3300003759 Ga0055525_1000241 Ga0055525_100024149 577
27 3300025225 Ga0209566_100032 Ga0209566_100032140 577
28 3300025226 Ga0209674_100001 Ga0209674_1000013425 577
29 3300025230 Ga0209563_100001 Ga0209563_1000013425 577
30 3300025253 Ga0209677_100001 Ga0209677_1000013425 577
31 3300049575 Ga0501039_0053223 Ga0501039_0053223_963_2858 582
32 3300049592 Ga0501076_0008771 Ga0501076_0008771_890_2785 582
33 3300003578 Ga0006562J51391_1176317 Ga0006562J51391_11763173 584
34 3300025230 Ga0209563_101064 Ga0209563_1010642 584
35 3300005548 Ga0070665_100000891 Ga0070665_10000089123 587
36 3300028379 Ga0268266_10002271 Ga0268266_1000227117 587
37 3300053080 Ga0500635_0000037 Ga0500635_0000037_27733_29697 593
38 3300045049 Ga0466959_0022435 Ga0466959_0022435_514_2472 595
39 3300045976 Ga0466967_0181423 Ga0466967_0181423_32_1828 596
40 3300048915 Ga0496112_0072778 Ga0496112_0072778_268_2199 596
41 3300013104 Ga0157370_10125165 Ga0157370_101251652 597
42 3300044658 Ga0466972_0007469 Ga0466972_0007469_1608_3590 598
43 3300044693 Ga0466961_0059818 Ga0466961_0059818_257_2239 598
44 3300044842 Ga0466957_0039383 Ga0466957_0039383_532_2514 598
45 3300005539 Ga0068853_100014631 Ga0068853_1000146317 599
46 3300048920 Ga0496117_0006582 Ga0496117_0006582_9441_11387 604
47 3300045976 Ga0466967_0038753 Ga0466967_0038753_203_2065 605
48 3300005983 Ga0081540_1041872 Ga0081540_10418722 606
49 3300005327 Ga0070658_10009274 Ga0070658_100092745 610
50 3300013105 Ga0157369_10012580 Ga0157369_100125809 610
51 3300025909 Ga0207705_10029020 Ga0207705_100290204 610
52 3300031240 Ga0265320_10002747 Ga0265320_100027479 610
53 3300031711 Ga0265314_10029451 Ga0265314_100294512 610
54 3300025272 Ga0209455_1003427 Ga0209455_10034274 611
55 3300049130 Ga0501310_000323 Ga0501310_000323_1034_2989 611
56 3300002772 JGI25164J39214_1000376 JGI25164J39214_10003766 613
57 3300003214 JGI25165J46597_1000014 JGI25165J46597_1000014295 613
58 3300025231 Ga0207427_100041 Ga0207427_10004184 613
59 3300025233 Ga0209437_100267 Ga0209437_10026777 613
60 3300025261 Ga0209233_1000014 Ga0209233_1000014703 613
61 3300037312 Ga0395899_0009920 Ga0395899_0009920_1579_3576 614
62 3300037418 Ga0395900_0008328 Ga0395900_0008328_8386_10383 614
63 3300037466 Ga0395898_0000194 Ga0395898_0000194_39379_41376 614
64 3300049568 Ga0501031_0010032 Ga0501031_0010032_3146_5056 614
65 3300049569 Ga0501032_0046319 Ga0501032_0046319_308_2218 614
66 3300049574 Ga0501038_0003344 Ga0501038_0003344_7780_9690 614
67 3300049579 Ga0501043_0026513 Ga0501043_0026513_1154_3064 614
68 3300049581 Ga0501047_0002035 Ga0501047_0002035_12502_14412 614
69 3300049582 Ga0501048_0010220 Ga0501048_0010220_2586_4496 614
70 3300049586 Ga0501070_0008577 Ga0501070_0008577_3893_5803 614
71 3300049822 Ga0501035_0008255 Ga0501035_0008255_5267_7177 614
72 3300049823 Ga0501044_0008605 Ga0501044_0008605_5277_7187 614
73 3300013307 Ga0157372_10120988 Ga0157372_101209881 616
74 3300048907 Ga0496104_0042790 Ga0496104_0042790_2064_3917 616
75 3300048908 Ga0496105_0103235 Ga0496105_0103235_252_2105 616
76 3300048912 Ga0496109_0011891 Ga0496109_0011891_3715_5568 616
77 3300048917 Ga0496114_0010777 Ga0496114_0010777_3708_5561 616
78 iso_pu_bacteria 2883821847 2883822961 617
79 3300044683 Ga0466965_0056924 Ga0466965_0056924_43_1905 618
80 iso_pu_bacteria 2558860280 2559432886 618
81 3300048914 Ga0496111_0014451 Ga0496111_0014451_708_2666 619
82 3300048924 Ga0496121_0040009 Ga0496121_0040009_1872_3815 619
83 3300044694 Ga0466963_0003813 Ga0466963_0003813_2042_3910 620
84 3300044694 Ga0466963_0043686 Ga0466963_0043686_535_2403 620
85 3300045976 Ga0466967_0001784 Ga0466967_0001784_3854_5722 620
86 3300045976 Ga0466967_0036112 Ga0466967_0036112_489_2459 620
87 3300049571 Ga0501034_0083118 Ga0501034_0083118_226_2244 620
88 3300005983 Ga0081540_1002784 Ga0081540_100278410 621
89 3300013307 Ga0157372_10149573 Ga0157372_101495732 622
90 3300048907 Ga0496104_0000063 Ga0496104_0000063_107870_109744 622
91 3300048908 Ga0496105_0000041 Ga0496105_0000041_6875_8749 622
92 3300048922 Ga0496119_0007739 Ga0496119_0007739_7456_9330 622
93 3300050508 nmdc:mga09592_63118_c1 nmdc:mga09592_63118_c1_800_2671 622
94 3300005937 Ga0081455_10012846 Ga0081455_100128463 623
95 3300006038 Ga0075365_10034019 Ga0075365_100340192 623
96 3300030521 Ga0307511_10005520 Ga0307511_100055204 623
97 3300048924 Ga0496121_0050057 Ga0496121_0050057_1590_3470 623
98 3300049586 Ga0501070_0001204 Ga0501070_0001204_3231_5228 623
99 iso_pu_bacteria 2884763398 2884763845 623
100 3300044693 Ga0466961_0044873 Ga0466961_0044873_709_2709 624
101 3300044765 Ga0466970_0029998 Ga0466970_0029998_78_2078 624
102 3300049569 Ga0501032_0005259 Ga0501032_0005259_2078_4081 625
103 3300049570 Ga0501033_0004270 Ga0501033_0004270_17_2020 625
104 3300049572 Ga0501036_0023771 Ga0501036_0023771_157_2160 625
105 3300049575 Ga0501039_0083972 Ga0501039_0083972_237_2240 625
106 3300049579 Ga0501043_0006434 Ga0501043_0006434_1518_3521 625
107 3300049580 Ga0501046_0009940 Ga0501046_0009940_2794_4797 625
108 3300049582 Ga0501048_0012283 Ga0501048_0012283_2923_4926 625
109 3300049823 Ga0501044_0002034 Ga0501044_0002034_248_2251 625
110 3300013105 Ga0157369_10056764 Ga0157369_100567642 627
111 3300032002 Ga0307416_100094140 Ga0307416_1000941401 627
112 3300044694 Ga0466963_0067624 Ga0466963_0067624_307_2226 627
113 3300044842 Ga0466957_0074665 Ga0466957_0074665_50_1942 627
114 3300021361 Ga0213872_10007053 Ga0213872_100070532 628
115 3300048905 Ga0496102_0000396 Ga0496102_0000396_36190_38184 629
116 3300009098 Ga0105245_10016554 Ga0105245_100165547 630
117 3300009101 Ga0105247_10012661 Ga0105247_100126616 630
118 3300013100 Ga0157373_10050401 Ga0157373_100504012 630
119 3300014745 Ga0157377_10006486 Ga0157377_100064866 630
120 iso_pu_bacteria 2844841374 2844844887 631
121 iso_pu_bacteria 2919055335 2919056827 631
122 iso_pu_bacteria 2928153084 2928154528 631
123 iso_pu_bacteria 8054472261 8054479011 633
124 3300005563 Ga0068855_100009285 Ga0068855_1000092856 634
125 3300009174 Ga0105241_10008383 Ga0105241_100083832 634
126 3300009174 Ga0105241_10025093 Ga0105241_100250932 634
127 3300010375 Ga0105239_10025036 Ga0105239_100250362 634
128 3300025949 Ga0207667_10017456 Ga0207667_100174562 634
129 3300044693 Ga0466961_0032065 Ga0466961_0032065_1126_3063 634
130 3300048903 Ga0496100_0052900 Ga0496100_0052900_236_2191 634
131 3300044901 Ga0466960_0001439 Ga0466960_0001439_4484_6436 635
132 3300048913 Ga0496110_0013095 Ga0496110_0013095_1716_3728 635
133 iso_pu_bacteria 2643221616 2644094196 635
134 iso_pu_bacteria 2919523602 2919526946 635
135 3300003760 Ga0055527_1000003 Ga0055527_1000003301 636
136 3300003762 Ga0055542_1000005 Ga0055542_1000005165 636
137 3300003763 Ga0055529_1000006 Ga0055529_1000006301 636
138 3300005435 Ga0070714_100003557 Ga0070714_1000035574 636
139 3300006051 Ga0075364_10025742 Ga0075364_100257422 636
140 3300013307 Ga0157372_10035820 Ga0157372_100358202 636
141 3300025228 Ga0209672_100003 Ga0209672_1000031140 636
142 3300025229 Ga0209147_100511 Ga0209147_1005118 636
143 3300025242 Ga0209258_101396 Ga0209258_1013962 636
144 3300025254 Ga0209148_1000004 Ga0209148_10000041435 636
145 3300025272 Ga0209455_1000091 Ga0209455_1000091106 636
146 3300037466 Ga0395898_0059267 Ga0395898_0059267_1513_3477 636
147 3300044901 Ga0466960_0024557 Ga0466960_0024557_215_2206 636
148 3300048905 Ga0496102_0054447 Ga0496102_0054447_285_2252 636
149 3300048907 Ga0496104_0131578 Ga0496104_0131578_38_2005 636
150 3300048917 Ga0496114_0074290 Ga0496114_0074290_361_2328 636
151 3300020082 Ga0206353_11470232 Ga0206353_114702321 637
152 3300044684 Ga0466966_0054103 Ga0466966_0054103_122_2086 637
153 3300044719 Ga0466971_0007285 Ga0466971_0007285_209_2140 637
154 3300046471 Ga0495650_0026846 Ga0495650_0026846_422_2389 637
155 3300061719 Ga0466962_0019207 Ga0466962_0019207_1177_3108 637
156 3300009545 Ga0105237_10043717 Ga0105237_100437172 638
157 3300010375 Ga0105239_10038046 Ga0105239_100380463 638
158 3300025913 Ga0207695_10063921 Ga0207695_100639213 638
159 3300045976 Ga0466967_0005868 Ga0466967_0005868_112_2058 638
160 3300005436 Ga0070713_100057826 Ga0070713_1000578261 639
161 3300025928 Ga0207700_10002690 Ga0207700_1000269012 639
162 3300048903 Ga0496100_0043788 Ga0496100_0043788_23_2005 639
163 3300048905 Ga0496102_0022774 Ga0496102_0022774_2601_4583 639
164 3300048907 Ga0496104_0009872 Ga0496104_0009872_3215_5197 639
165 3300048908 Ga0496105_0030490 Ga0496105_0030490_106_2088 639
166 3300048908 Ga0496105_0050953 Ga0496105_0050953_758_2740 639
167 3300048917 Ga0496114_0015368 Ga0496114_0015368_3130_5112 639
168 3300005334 Ga0068869_100021397 Ga0068869_1000213972 642
169 3300005338 Ga0068868_100054799 Ga0068868_1000547992 642
170 3300005340 Ga0070689_100005546 Ga0070689_1000055462 642
171 3300005355 Ga0070671_100016561 Ga0070671_1000165617 642
172 3300005455 Ga0070663_100034299 Ga0070663_1000342993 642
173 3300005456 Ga0070678_100010101 Ga0070678_1000101012 642
174 3300005458 Ga0070681_10010713 Ga0070681_1001071311 642
175 3300005547 Ga0070693_100005299 Ga0070693_1000052992 642
176 3300005615 Ga0070702_100028206 Ga0070702_1000282061 642
177 3300005617 Ga0068859_100110884 Ga0068859_1001108842 642
178 3300005618 Ga0068864_100007592 Ga0068864_10000759211 642
179 3300005840 Ga0068870_10000371 Ga0068870_1000037110 642
180 3300005841 Ga0068863_100002854 Ga0068863_1000028542 642
181 3300005843 Ga0068860_100080366 Ga0068860_1000803663 642
182 3300006237 Ga0097621_100016929 Ga0097621_1000169292 642
183 3300006871 Ga0075434_100021210 Ga0075434_1000212105 642
184 3300006914 Ga0075436_100008040 Ga0075436_1000080408 642
185 3300006931 Ga0097620_100110884 Ga0097620_1001108842 642
186 3300007076 Ga0075435_100021165 Ga0075435_1000211652 642
187 3300013102 Ga0157371_10045772 Ga0157371_100457722 642
188 3300013104 Ga0157370_10098421 Ga0157370_100984212 642
189 3300020070 Ga0206356_11224331 Ga0206356_112243312 642
190 3300025321 Ga0207656_10022768 Ga0207656_100227682 642
191 3300025901 Ga0207688_10002552 Ga0207688_100025524 642
192 3300025903 Ga0207680_10038465 Ga0207680_100384652 642
193 3300025908 Ga0207643_10000022 Ga0207643_1000002298 642
194 3300025911 Ga0207654_10012769 Ga0207654_100127695 642
195 3300025912 Ga0207707_10011337 Ga0207707_100113372 642
196 3300025917 Ga0207660_10004188 Ga0207660_1000418811 642
197 3300025919 Ga0207657_10021866 Ga0207657_100218667 642
198 3300025920 Ga0207649_10012158 Ga0207649_100121585 642
199 3300025921 Ga0207652_10007420 Ga0207652_100074209 642
200 3300025925 Ga0207650_10003978 Ga0207650_100039782 642
201 3300025926 Ga0207659_10003886 Ga0207659_100038867 642
202 3300025927 Ga0207687_10004018 Ga0207687_100040182 642
203 3300025931 Ga0207644_10004919 Ga0207644_100049197 642
204 3300025942 Ga0207689_10011609 Ga0207689_100116092 642
205 3300025944 Ga0207661_10002483 Ga0207661_100024838 642
206 3300026041 Ga0207639_10008682 Ga0207639_100086822 642
207 3300026067 Ga0207678_10001333 Ga0207678_1000133316 642
208 3300026075 Ga0207708_10007270 Ga0207708_100072709 642
209 3300026078 Ga0207702_10001707 Ga0207702_1000170721 642
210 3300026088 Ga0207641_10002708 Ga0207641_1000270817 642
211 3300026095 Ga0207676_10003053 Ga0207676_100030534 642
212 3300026121 Ga0207683_10000171 Ga0207683_1000017140 642
213 3300027907 Ga0207428_10010556 Ga0207428_1001055610 642
214 3300048904 Ga0496101_0055948 Ga0496101_0055948_817_2796 642
215 3300048905 Ga0496102_0014213 Ga0496102_0014213_3095_5074 642
216 3300048907 Ga0496104_0007432 Ga0496104_0007432_6197_8176 642
217 3300048908 Ga0496105_0006149 Ga0496105_0006149_6188_8167 642
218 3300048909 Ga0496106_0011118 Ga0496106_0011118_3655_5634 642
219 3300048910 Ga0496107_0066492 Ga0496107_0066492_422_2401 642
220 3300048911 Ga0496108_0004319 Ga0496108_0004319_7589_9568 642
221 3300048912 Ga0496109_0023179 Ga0496109_0023179_865_2844 642
222 3300048913 Ga0496110_0006321 Ga0496110_0006321_4843_6822 642
223 3300048914 Ga0496111_0053733 Ga0496111_0053733_490_2469 642
224 3300048915 Ga0496112_0025643 Ga0496112_0025643_831_2810 642
225 3300048916 Ga0496113_0002181 Ga0496113_0002181_2480_4459 642
226 3300050511 nmdc:mga08y16_10994_c1 nmdc:mga08y16_10994_c1_574_2553 642
227 3300050512 nmdc:mga0n895_88411_c1 nmdc:mga0n895_88411_c1_38_2017 642
228 3300050513 nmdc:mga0rr50_1732_c1 nmdc:mga0rr50_1732_c1_9147_11126 642
229 3300050514 nmdc:mga08x19_6011_c1 nmdc:mga08x19_6011_c1_4407_6386 642
230 3300050515 nmdc:mga0a205_36784_c1 nmdc:mga0a205_36784_c1_1853_3832 642
231 iso_pu_bacteria 2818991318 2819427628 650
232 3300044684 Ga0466966_0048447 Ga0466966_0048447_153_2168 656
233 3300044693 Ga0466961_0055827 Ga0466961_0055827_231_2246 656
234 3300045049 Ga0466959_0027358 Ga0466959_0027358_1340_3379 667
235 3300002067 JGI24735J21928_10003415 JGI24735J21928_100034152 686

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02705

K_trans

K+ potassium transporter integral membrane domain

67

522

0.97

PF22776

K_trans_C

K+ potassium transporter C-terminal domain

533

686

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.7052 66 499
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.6919 55 503
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.672 55 503
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.6696 66 499
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.6564 55 499
ID Description Score Start End Superfamily
af_Q69RI8_116_588_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9633 69 502 1.20.1740.10
af_P63183_13_544_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9629 69 606 1.20.1740.10
af_Q54JK9_60_587_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9599 69 606 1.20.1740.10
af_Q942X8_26_493_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9597 69 496 1.20.1740.10
af_P63183_13_544_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9594 69 606 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A257MY35-F1-model_v4 KUP system potassium uptake protein 0.983 67 353 GO:0015079
GO:0016020
AF-A0A6D0F7Y8-F1-model_v4 deleted 0.9824 178 408
AF-A0A529IEW5-F1-model_v4 deleted 0.981 63 473
AF-A0A1G0BG96-F1-model_v4 Probable potassium transport system protein Kup 0.9797 69 686 GO:0005886
GO:0015079
GO:0015293
AF-A0A1F7QPR6-F1-model_v4 Probable potassium transport system protein Kup 0.9769 59 686 GO:0005886
GO:0015079
GO:0015293

Feature Viewer

pLDDT pTM Quality
82.65 0.8 High
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Predicted Structure (AlphaFold2)

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