F347982

General Info

Members Datasets Scaffolds Average Seq Length
235 180 165 1032

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10001203|Ga0075364_100012032
Length 1045
Sequence VKLSDLSIKRPVFAAVISLLLVALGVMAFTRLTVRELPNIDPPIVSVQVSYPGASAAVVETRITQILEDALAGIEGIRTIESRSRNGRSDVTIEFNLTRDIEAAANDVRDAISRVMDRMPIEADPPEISKVEADADAIMWLNMRSSVMDTMELSDYADRYVVDRLSALDGVARVQLSGAQRYAMRIWLDRDAMAARGVTASDVEQALRSENIELPAGRIESETRDFTLRVERGYREPDQFAQIPLRKGADGYVVRMGDVARIELGAAERRSYMRSNSIPNVGLGIVRTSIANALDVAQAARAEAERIQQTLPEGTEIFVAADNTVFIDAAISRVYWTLAEAMALVFIVIWLFLGSLRAALIPAVTVPVCLVAAFIALYAFGFSINLLTLLALVLCIGLVVDDAIIVLENVQRRADLGEPPLVAARRGTRQVAFAVIATTAVLVAVFLPVGFMEGNSGRLFRELSVALAGAVALSAFIALTLTPMMCSKLVRPHGHRQTGFNAWTNRHLNRLGEAYGRGVGRLVALSGVRLTALIAAIMATCALVAMLLFWRVPSELSPAEDRGRFFIGVDGPEGAGYDYTVAQMQQVEKIFAPLVGEDRPIERANSRVPRGWGGSEDMHTGQVIVFLRDWRDRDASTAEVVEQLRGQLAQLPGVQARANVPGGLVGSRGQRYQLVLGGPDYAELAQWRDRILARMRENPGIQDPDSDYKETRPQMRVDIDRARAADLGVSVQEIGRTLETMMGQRQVTTFVDNGEEYDVLLQADRDRRMAPDDLTGTFVRGRDGVLVPLSNLVTLSEIAEPGSFNRFNRLRSITIAGGLAPGYTMSEAIAWTYQVAAEELPDYAQVDWKGESREFQEAGGAVILTFAMALLIVYLVLAAQFESFIHPLTIMLTVPLAVLGALLGLWATGGTLNLFSQIGIVMLIGLAAKNGILIVEFANQLRDEGRTVRAAIAEASAVRLRPILMTSAATIMGAIPLVVAGGPGSASRATIGIVVIFGVAFSTLLSLFVVPTFYALLAPFTRSPDALAQELDKLEAETPEVGGHA

Samples

Sample ID Description Type Environment
1 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
2 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
3 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
4 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
5 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
6 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
7 2643221559 Lysobacter sp. Root559 Isolate Unclassified
8 2643221573 Lysobacter sp. Root604 Isolate Unclassified
9 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
10 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
11 2643221586 Lysobacter sp. Root667 Isolate Unclassified
12 2643221593 Lysobacter sp. Root690 Isolate Unclassified
13 2643221612 Lysobacter sp. Root76 Isolate Unclassified
14 2643221695 Lysobacter sp. Root494 Isolate Unclassified
15 2643221720 Lysobacter sp. Root916 Isolate Unclassified
16 2643221727 Lysobacter sp. Root96 Isolate Unclassified
17 2643221728 Lysobacter sp. Root983 Isolate Unclassified
18 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
19 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
20 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
21 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
22 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
23 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
24 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
25 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
26 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
27 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
28 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
29 2881714928 Pseudidiomarina mangrovi ZQ330 Isolate Rhizosphere
30 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
31 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
32 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
33 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
34 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
35 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
36 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
37 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
38 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
39 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
40 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
41 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
42 2919513703 Luteimonas sp. 3794 Isolate Unclassified
43 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
44 2919675420 Luteimonas terrae 4099 Isolate Unclassified
45 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
46 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
47 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
48 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
49 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
50 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
51 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
52 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
53 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
54 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
55 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
56 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
57 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
58 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
59 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
60 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
61 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
62 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
63 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
64 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
65 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
66 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
67 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
68 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
69 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
70 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
71 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
72 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
73 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
74 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
75 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
76 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
77 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
78 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
79 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
80 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
81 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
82 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
83 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
84 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
85 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
86 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
87 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
88 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
89 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
90 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
91 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
92 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
93 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
94 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
95 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
96 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
97 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
98 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
99 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
104 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
106 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
114 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
115 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
116 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
119 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
129 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
130 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
131 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
132 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
133 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
134 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
135 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
139 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
140 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
141 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
142 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
143 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
144 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
145 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
150 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
172 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
173 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
174 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
175 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
176 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
177 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
178 8054357960 Idiomarina rhizosphaerae M1R2S28 Isolate Rhizosphere
179 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
180 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.21
Metatranscriptomes 0
Isolates 29.79

Biome Distribution

Category Percentage (%)
Aerial Root 0.43
Bulb 0
Endosphere 25.53
Nodule 0.43
Rhizoplane 0.43
Rhizosphere 46.38
Stem 0
Stem Tuber 0
Unclassified 26.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10007382 3300001989 Bacteria 4127
2 JGI25152J39213_1002309 3300002773 Bacteria 7353
3 JGI25150J39212_1001278 3300002774 Bacteria 7208
4 JGI25151J46595_10000119 3300003187 Bacteria 106415
5 JGI25151J46595_10000141 3300003187 Bacteria 95351
6 JGI25153J46596_10000106 3300003215 Bacteria 95351
7 Ga0055526_1000126 3300003771 Bacteria 67619
8 Ga0055537_1000088 3300003773 Bacteria 66713
9 Ga0055537_1000336 3300003773 Bacteria 32133
10 Ga0055524_1000074 3300003775 Bacteria 122843
11 Ga0055536_1001486 3300003781 Bacteria 14096
12 Ga0055536_1001490 3300003781 Bacteria 14074
13 Ga0055534_1000097 3300003784 Bacteria 67619
14 Ga0055534_1000348 3300003784 Bacteria 29643
15 Ga0055528_1000028 3300003790 Bacteria 122843
16 Ga0055530_10000558 3300003791 Bacteria 32344
17 Ga0055530_10000908 3300003791 Bacteria 24314
18 Ga0055531_10002483 3300003794 Bacteria 12302
19 Ga0055531_10006505 3300003794 Bacteria 6623
20 Ga0055531_10010956 3300003794 Bacteria 4437
21 Ga0058692_1000013 3300003856 Bacteria 316299
22 Ga0065704_10070673 3300005289 Bacteria 17884
23 Ga0065704_10075320 3300005289 Bacteria 5659
24 Ga0070670_100000776 3300005331 Bacteria 24810
25 Ga0070668_100005059 3300005347 Bacteria 9761
26 Ga0070668_100008513 3300005347 Bacteria 7619
27 Ga0070674_100006742 3300005356 Bacteria 6723
28 Ga0081455_10000089 3300005937 Bacteria 98248
29 Ga0075364_10001203 3300006051 Bacteria 13910
30 Ga0075369_10004086 3300006186 Bacteria 5366
31 Ga0075434_100000183 3300006871 Bacteria 40834
32 Ga0105251_10000243 3300009011 Bacteria 54787
33 Ga0111539_10025718 3300009094 Bacteria 7211
34 Ga0105030_100414 3300009987 Bacteria 3757
35 Ga0157371_10001980 3300013102 Bacteria 20307
36 Ga0157371_10019648 3300013102 Bacteria 4977
37 Ga0157370_10001915 3300013104 Bacteria 25594
38 Ga0157380_10002815 3300014326 Bacteria 11826
39 Ga0182008_10000653 3300014497 Bacteria 25302
40 Ga0182007_10000560 3300015262 Bacteria 21976
41 Ga0182005_1000392 3300015265 Bacteria 23846
42 Ga0183360_10001 3300015689 Bacteria 3943671
43 Ga0163161_10015093 3300017792 Bacteria 5386
44 Ga0207425_1000084 3300025245 Bacteria 95660
45 Ga0209129_1000057 3300025258 Bacteria 253632
46 Ga0209565_1000023 3300025263 Bacteria 388244
47 Ga0209565_1000034 3300025263 Bacteria 312950
48 Ga0209673_1000039 3300025273 Bacteria 312950
49 Ga0209673_1000629 3300025273 Bacteria 53733
50 Ga0209675_1000016 3300025291 Bacteria 391965
51 Ga0209675_1000023 3300025291 Bacteria 312950
52 Ga0209676_1000027 3300025292 Bacteria 560222
53 Ga0209676_1000037 3300025292 Bacteria 457562
54 Ga0209676_1000160 3300025292 Bacteria 161069
55 Ga0209676_1000280 3300025292 Bacteria 105988
56 Ga0209676_1000338 3300025292 Bacteria 89337
57 Ga0209676_1001753 3300025292 Bacteria 18501
58 Ga0209025_1000013 3300025294 Bacteria 871757
59 Ga0209025_1000023 3300025294 Bacteria 541307
60 Ga0209564_1000066 3300025295 Bacteria 312899
61 Ga0209758_1000014 3300025297 Bacteria 871757
62 Ga0209050_1000352 3300025298 Bacteria 88558
63 Ga0209050_1000372 3300025298 Bacteria 85772
64 Ga0209050_1002870 3300025298 Bacteria 13636
65 Ga0209256_1000048 3300025299 Bacteria 312899
66 Ga0209256_1002228 3300025299 Bacteria 16548
67 Ga0209256_1003859 3300025299 Bacteria 9981
68 Ga0209256_1003898 3300025299 Bacteria 9878
69 Ga0209051_1001077 3300025303 Bacteria 25327
70 Ga0209051_1010884 3300025303 Bacteria 4545
71 Ga0209257_1000046 3300025304 Bacteria 477765
72 Ga0209257_1000177 3300025304 Bacteria 161069
73 Ga0209257_1000198 3300025304 Bacteria 149013
74 Ga0209257_1000270 3300025304 Bacteria 119394
75 Ga0209257_1000383 3300025304 Bacteria 88315
76 Ga0209257_1002000 3300025304 Bacteria 21864
77 Ga0209257_1002431 3300025304 Bacteria 18547
78 Ga0209257_1003182 3300025304 Bacteria 14605
79 Ga0207713_1000394 3300025735 Bacteria 46798
80 Ga0207650_10002126 3300025925 Bacteria 13857
81 Ga0207709_10002255 3300025935 Bacteria 12258
82 Ga0209371_1000007 3300027312 Bacteria 1050654
83 Ga0268256_1000008 3300030500 Bacteria 1050654
84 Ga0316183_1040976 3300030742 Bacteria 10616
85 Ga0307513_10020162 3300031456 Bacteria 7910
86 Ga0307408_100005058 3300031548 Bacteria 8847
87 Ga0307405_10004780 3300031731 Bacteria 6458
88 Ga0307410_10004978 3300031852 Bacteria 6967
89 Ga0307410_10006705 3300031852 Bacteria 6238
90 Ga0307409_100017906 3300031995 Bacteria 4739
91 Ga0307416_100000840 3300032002 Bacteria 16156
92 Ga0307411_10000640 3300032005 Bacteria 12709
93 Ga0307415_100003678 3300032126 Bacteria 7846
94 Ga0316574_0006998 3300035398 Bacteria 6145
95 Ga0395900_0002614 3300037418 Bacteria 19675
96 Ga0395905_0016686 3300037471 Bacteria 6978
97 Ga0395901_0017396 3300038443 Bacteria 7339
98 Ga0237819_01216 3300038705 Bacteria 7155
99 Ga0237816_00077 3300039145 Bacteria 6934
100 Ga0439436_0004179 3300041404 Bacteria 4424
101 Ga0439436_0006083 3300041404 Bacteria 3702
102 Ga0451837_1107573 3300041494 Bacteria 3812
103 Ga0439449_0001174 3300042007 Bacteria 10271
104 Ga0439449_0008337 3300042007 Bacteria 3941
105 Ga0439446_0000544 3300042156 Bacteria 7593
106 Ga0450908_000771 3300042184 Bacteria 6132
107 Ga0439434_0001607 3300042435 Bacteria 6525
108 Ga0453684_0000159 3300044712 Bacteria 300297
109 Ga0451576_0000401 3300045051 Bacteria 101008
110 Ga0495638_0002943 3300046460 Bacteria 13599
111 Ga0495610_0007348 3300046512 Bacteria 7357
112 Ga0495643_0002796 3300046522 Bacteria 13336
113 Ga0495654_0011692 3300046530 Bacteria 4742
114 Ga0495598_0000633 3300046537 Bacteria 6654
115 Ga0495621_0000165 3300046539 Bacteria 14813
116 Ga0495668_0001725 3300046616 Bacteria 20142
117 Ga0495668_0002199 3300046616 Bacteria 16620
118 Ga0495668_0010470 3300046616 Bacteria 5610
119 Ga0495668_0012809 3300046616 Bacteria 4966
120 Ga0495672_0000414 3300047320 Bacteria 51636
121 Ga0495672_0007272 3300047320 Bacteria 8352
122 Ga0496109_0010292 3300048912 Bacteria 7986
123 Ga0496117_0001312 3300048920 Bacteria 36601
124 Ga0496117_0002229 3300048920 Bacteria 25046
125 Ga0496117_0005570 3300048920 Bacteria 13177
126 Ga0496118_0002901 3300048921 Bacteria 22303
127 Ga0496118_0006271 3300048921 Bacteria 13145
128 Ga0496118_0011010 3300048921 Bacteria 8883
129 Ga0496119_0001980 3300048922 Bacteria 23261
130 Ga0496119_0002109 3300048922 Bacteria 22412
131 Ga0496120_0000101 3300048923 Bacteria 142982
132 Ga0496120_0001890 3300048923 Bacteria 23243
133 Ga0496121_0023658 3300048924 Bacteria 5905
134 Ga0496122_0000241 3300048925 Bacteria 122954
135 Ga0496123_0000822 3300048926 Bacteria 49865
136 Ga0496123_0009418 3300048926 Bacteria 8799
137 Ga0496124_0000937 3300048927 Bacteria 46784
138 Ga0496124_0001460 3300048927 Bacteria 34888
139 Ga0496124_0008508 3300048927 Bacteria 10718
140 Ga0496124_0048545 3300048927 Bacteria 3626
141 Ga0496125_0005830 3300048928 Bacteria 13533
142 Ga0496125_0032305 3300048928 Bacteria 4650
143 Ga0496126_0008057 3300048929 Bacteria 11419
144 Ga0496126_0011665 3300048929 Bacteria 9066
145 Ga0501031_0013115 3300049568 Bacteria 5406
146 Ga0501032_0003150 3300049569 Bacteria 12686
147 Ga0501032_0007085 3300049569 Bacteria 8220
148 Ga0501033_0001542 3300049570 Bacteria 20359
149 Ga0501034_0001335 3300049571 Bacteria 33318
150 Ga0501034_0001411 3300049571 Bacteria 32243
151 Ga0501034_0003968 3300049571 Bacteria 16624
152 Ga0501037_0007721 3300049573 Bacteria 7874
153 Ga0501040_0003144 3300049576 Bacteria 10710
154 Ga0501041_0009332 3300049577 Bacteria 5778
155 Ga0501043_0002444 3300049579 Bacteria 15729
156 Ga0501047_0013682 3300049581 Bacteria 7702
157 Ga0501076_0006532 3300049592 Bacteria 8461
158 Ga0501076_0026042 3300049592 Bacteria 4527
159 Ga0501045_0010681 3300049824 Bacteria 6436
160 nmdc:mga00v17_577_c1 3300050491 Bacteria 20507
161 nmdc:mga0n895_2059_c1 3300050512 Bacteria 15483
162 nmdc:mga0a205_2666_c1 3300050515 Bacteria 15778
163 Ga0500651_0000166 3300053093 Bacteria 42732
164 Ga0500592_000238 3300053116 Bacteria 9975
165 Ga0500573_0000019 3300053140 Bacteria 173601

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035398 Ga0316574_0006998 Ga0316574_0006998_2593_5796 794
2 3300006871 Ga0075434_100000183 Ga0075434_10000018323 860
3 3300050512 nmdc:mga0n895_2059_c1 nmdc:mga0n895_2059_c1_11140_14262 860
4 3300050515 nmdc:mga0a205_2666_c1 nmdc:mga0a205_2666_c1_10672_13794 860
5 3300042184 Ga0450908_000771 Ga0450908_000771_2873_5995 868
6 3300053093 Ga0500651_0000166 Ga0500651_0000166_17557_20679 873
7 3300025304 Ga0209257_1000270 Ga0209257_100027069 874
8 iso_pu_bacteria 2522572158 2523106943 877
9 iso_pu_bacteria 8057132660 8057135870 878
10 3300047320 Ga0495672_0007272 Ga0495672_0007272_2626_5772 879
11 3300005347 Ga0070668_100005059 Ga0070668_1000050593 880
12 3300013102 Ga0157371_10019648 Ga0157371_100196482 880
13 3300025298 Ga0209050_1002870 Ga0209050_100287012 880
14 3300025304 Ga0209257_1000046 Ga0209257_100004649 880
15 3300025935 Ga0207709_10002255 Ga0207709_100022553 880
16 3300031456 Ga0307513_10020162 Ga0307513_100201623 880
17 3300037418 Ga0395900_0002614 Ga0395900_0002614_8668_11793 880
18 3300037471 Ga0395905_0016686 Ga0395905_0016686_3067_6192 880
19 3300038443 Ga0395901_0017396 Ga0395901_0017396_2602_5727 880
20 3300046539 Ga0495621_0000165 Ga0495621_0000165_6711_9845 880
21 3300048912 Ga0496109_0010292 Ga0496109_0010292_3146_6286 880
22 iso_pu_bacteria 8054357960 8054358522 880
23 3300002773 JGI25152J39213_1002309 JGI25152J39213_10023094 881
24 3300002774 JGI25150J39212_1001278 JGI25150J39212_10012783 881
25 3300003187 JGI25151J46595_10000141 JGI25151J46595_1000014185 881
26 3300003215 JGI25153J46596_10000106 JGI25153J46596_1000010685 881
27 3300003856 Ga0058692_1000013 Ga0058692_100001368 881
28 3300006186 Ga0075369_10004086 Ga0075369_100040863 881
29 3300025245 Ga0207425_1000084 Ga0207425_10000842 881
30 3300025258 Ga0209129_1000057 Ga0209129_1000057132 881
31 3300025292 Ga0209676_1000037 Ga0209676_1000037188 881
32 3300025294 Ga0209025_1000013 Ga0209025_1000013199 881
33 3300025297 Ga0209758_1000014 Ga0209758_1000014199 881
34 3300027312 Ga0209371_1000007 Ga0209371_1000007748 881
35 3300030500 Ga0268256_1000008 Ga0268256_1000008203 881
36 3300038705 Ga0237819_01216 Ga0237819_01216_1498_4623 881
37 3300003773 Ga0055537_1000336 Ga0055537_10003368 882
38 3300003781 Ga0055536_1001486 Ga0055536_10014864 882
39 3300003781 Ga0055536_1001490 Ga0055536_10014904 882
40 3300003784 Ga0055534_1000348 Ga0055534_10003482 882
41 3300003791 Ga0055530_10000558 Ga0055530_100005588 882
42 3300003791 Ga0055530_10000908 Ga0055530_1000090812 882
43 3300003794 Ga0055531_10002483 Ga0055531_100024833 882
44 3300003794 Ga0055531_10006505 Ga0055531_100065053 882
45 3300003794 Ga0055531_10010956 Ga0055531_100109562 882
46 3300005289 Ga0065704_10075320 Ga0065704_100753202 882
47 3300005331 Ga0070670_100000776 Ga0070670_10000077613 882
48 3300009011 Ga0105251_10000243 Ga0105251_1000024324 882
49 3300013102 Ga0157371_10001980 Ga0157371_100019808 882
50 3300013104 Ga0157370_10001915 Ga0157370_100019159 882
51 3300014497 Ga0182008_10000653 Ga0182008_1000065310 882
52 3300015262 Ga0182007_10000560 Ga0182007_1000056011 882
53 3300015265 Ga0182005_1000392 Ga0182005_10003928 882
54 3300017792 Ga0163161_10015093 Ga0163161_100150932 882
55 3300025263 Ga0209565_1000023 Ga0209565_1000023104 882
56 3300025273 Ga0209673_1000629 Ga0209673_100062923 882
57 3300025291 Ga0209675_1000016 Ga0209675_1000016210 882
58 3300025292 Ga0209676_1000160 Ga0209676_1000160120 882
59 3300025292 Ga0209676_1000338 Ga0209676_100033833 882
60 3300025298 Ga0209050_1000352 Ga0209050_100035223 882
61 3300025298 Ga0209050_1000372 Ga0209050_100037228 882
62 3300025299 Ga0209256_1003859 Ga0209256_10038593 882
63 3300025303 Ga0209051_1001077 Ga0209051_100107721 882
64 3300025304 Ga0209257_1000177 Ga0209257_100017723 882
65 3300025304 Ga0209257_1000383 Ga0209257_100038337 882
66 3300025735 Ga0207713_1000394 Ga0207713_100039426 882
67 3300025925 Ga0207650_10002126 Ga0207650_100021262 882
68 3300030742 Ga0316183_1040976 Ga0316183_10409763 882
69 3300046460 Ga0495638_0002943 Ga0495638_0002943_9133_12258 882
70 3300046512 Ga0495610_0007348 Ga0495610_0007348_1266_4391 882
71 3300046522 Ga0495643_0002796 Ga0495643_0002796_1073_4198 882
72 3300047320 Ga0495672_0000414 Ga0495672_0000414_9226_12351 882
73 3300048920 Ga0496117_0001312 Ga0496117_0001312_8902_12027 882
74 3300048920 Ga0496117_0002229 Ga0496117_0002229_10917_14042 882
75 3300048920 Ga0496117_0005570 Ga0496117_0005570_9388_12513 882
76 3300048921 Ga0496118_0002901 Ga0496118_0002901_9870_12995 882
77 3300048921 Ga0496118_0006271 Ga0496118_0006271_1160_4285 882
78 3300048921 Ga0496118_0011010 Ga0496118_0011010_793_3918 882
79 3300048922 Ga0496119_0001980 Ga0496119_0001980_7633_10758 882
80 3300048922 Ga0496119_0002109 Ga0496119_0002109_13996_17121 882
81 3300048923 Ga0496120_0000101 Ga0496120_0000101_52347_55472 882
82 3300048923 Ga0496120_0001890 Ga0496120_0001890_7615_10740 882
83 3300048925 Ga0496122_0000241 Ga0496122_0000241_16972_20097 882
84 3300048926 Ga0496123_0000822 Ga0496123_0000822_16972_20097 882
85 3300048926 Ga0496123_0009418 Ga0496123_0009418_5111_8236 882
86 3300048927 Ga0496124_0000937 Ga0496124_0000937_8250_11375 882
87 3300048927 Ga0496124_0001460 Ga0496124_0001460_11005_14130 882
88 3300048927 Ga0496124_0008508 Ga0496124_0008508_948_4073 882
89 3300048927 Ga0496124_0048545 Ga0496124_0048545_14_2785 882
90 3300048928 Ga0496125_0005830 Ga0496125_0005830_1381_4506 882
91 3300048928 Ga0496125_0032305 Ga0496125_0032305_1421_4546 882
92 3300048929 Ga0496126_0008057 Ga0496126_0008057_660_3785 882
93 iso_pu_bacteria 2881714928 2881715251 882
94 iso_pu_bacteria 2899275550 2899276613 882
95 3300025292 Ga0209676_1001753 Ga0209676_10017532 885
96 3300025303 Ga0209051_1010884 Ga0209051_10108843 885
97 3300025304 Ga0209257_1002000 Ga0209257_10020009 885
98 3300025304 Ga0209257_1002431 Ga0209257_10024318 885
99 3300025304 Ga0209257_1003182 Ga0209257_100318211 885
100 3300053140 Ga0500573_0000019 Ga0500573_0000019_142765_145866 885
101 iso_pu_bacteria 2919493220 2919494106 887
102 iso_pu_bacteria 2919543075 2919543734 887
103 iso_pu_bacteria 2648501241 2649120293 888
104 iso_pu_bacteria 2651869818 2652974155 888
105 iso_pu_bacteria 2894772417 2894772539 888
106 3300041494 Ga0451837_1107573 Ga0451837_1107573_461_3631 890
107 iso_pu_bacteria 2929199973 2929203279 890
108 iso_pu_bacteria 8002869464 8002871138 890
109 iso_pu_bacteria 8055909800 8055916184 890
110 3300005289 Ga0065704_10070673 Ga0065704_100706733 891
111 3300005356 Ga0070674_100006742 Ga0070674_1000067423 891
112 3300006051 Ga0075364_10001203 Ga0075364_100012032 891
113 3300009094 Ga0111539_10025718 Ga0111539_100257183 891
114 3300009987 Ga0105030_100414 Ga0105030_1004142 891
115 3300014326 Ga0157380_10002815 Ga0157380_1000281510 891
116 3300025292 Ga0209676_1000027 Ga0209676_1000027334 891
117 3300031548 Ga0307408_100005058 Ga0307408_1000050582 891
118 3300031731 Ga0307405_10004780 Ga0307405_100047805 891
119 3300031852 Ga0307410_10004978 Ga0307410_100049782 891
120 3300031852 Ga0307410_10006705 Ga0307410_100067055 891
121 3300031995 Ga0307409_100017906 Ga0307409_1000179062 891
122 3300032002 Ga0307416_100000840 Ga0307416_1000008407 891
123 3300032005 Ga0307411_10000640 Ga0307411_100006408 891
124 3300032126 Ga0307415_100003678 Ga0307415_1000036786 891
125 3300039145 Ga0237816_00077 Ga0237816_00077_987_4121 891
126 3300042007 Ga0439449_0001174 Ga0439449_0001174_6838_9972 891
127 3300042156 Ga0439446_0000544 Ga0439446_0000544_1299_4421 891
128 3300042435 Ga0439434_0001607 Ga0439434_0001607_1815_4937 891
129 3300044712 Ga0453684_0000159 Ga0453684_0000159_252842_255967 891
130 3300045051 Ga0451576_0000401 Ga0451576_0000401_53522_56647 891
131 3300046537 Ga0495598_0000633 Ga0495598_0000633_1769_4891 891
132 3300046616 Ga0495668_0012809 Ga0495668_0012809_984_4124 891
133 3300048929 Ga0496126_0011665 Ga0496126_0011665_12_2975 891
134 3300049569 Ga0501032_0003150 Ga0501032_0003150_8486_11608 891
135 3300049571 Ga0501034_0001335 Ga0501034_0001335_8584_11718 891
136 3300049571 Ga0501034_0003968 Ga0501034_0003968_4260_7391 891
137 3300049576 Ga0501040_0003144 Ga0501040_0003144_898_4020 891
138 3300049577 Ga0501041_0009332 Ga0501041_0009332_16_3090 891
139 3300049592 Ga0501076_0006532 Ga0501076_0006532_1704_4826 891
140 3300049592 Ga0501076_0026042 Ga0501076_0026042_609_3731 891
141 3300049824 Ga0501045_0010681 Ga0501045_0010681_3228_6350 891
142 3300050491 nmdc:mga00v17_577_c1 nmdc:mga00v17_577_c1_9447_12584 891
143 iso_pu_bacteria 2643221579 2643905293 891
144 iso_pu_bacteria 2643221581 2643914975 891
145 iso_pu_bacteria 2894414249 2894414578 891
146 iso_pu_bacteria 2895498888 2895499648 891
147 iso_pu_bacteria 2895511927 2895512672 891
148 iso_pu_bacteria 2895522137 2895522686 891
149 iso_pu_bacteria 2895525241 2895525552 891
150 iso_pu_bacteria 2919513703 2919515437 891
151 iso_pu_bacteria 2919675420 2919675818 891
152 iso_pu_bacteria 2923516293 2923517402 891
153 iso_pu_bacteria 2923525760 2923529416 891
154 3300003187 JGI25151J46595_10000119 JGI25151J46595_1000011917 892
155 3300003771 Ga0055526_1000126 Ga0055526_10001265 892
156 3300003773 Ga0055537_1000088 Ga0055537_100008857 892
157 3300003775 Ga0055524_1000074 Ga0055524_10000745 892
158 3300003784 Ga0055534_1000097 Ga0055534_100009757 892
159 3300003790 Ga0055528_1000028 Ga0055528_1000028108 892
160 3300005347 Ga0070668_100008513 Ga0070668_1000085135 892
161 3300015689 Ga0183360_10001 Ga0183360_1000181 892
162 3300025263 Ga0209565_1000034 Ga0209565_1000034168 892
163 3300025273 Ga0209673_1000039 Ga0209673_1000039168 892
164 3300025291 Ga0209675_1000023 Ga0209675_1000023168 892
165 3300025292 Ga0209676_1000280 Ga0209676_100028066 892
166 3300025294 Ga0209025_1000023 Ga0209025_1000023345 892
167 3300025295 Ga0209564_1000066 Ga0209564_1000066105 892
168 3300025299 Ga0209256_1000048 Ga0209256_1000048168 892
169 3300025299 Ga0209256_1002228 Ga0209256_100222813 892
170 3300025299 Ga0209256_1003898 Ga0209256_10038985 892
171 3300025304 Ga0209257_1000198 Ga0209257_100019886 892
172 3300041404 Ga0439436_0004179 Ga0439436_0004179_1261_4386 892
173 3300041404 Ga0439436_0006083 Ga0439436_0006083_137_3262 892
174 3300042007 Ga0439449_0008337 Ga0439449_0008337_731_3856 892
175 3300046616 Ga0495668_0002199 Ga0495668_0002199_6344_9469 892
176 3300048924 Ga0496121_0023658 Ga0496121_0023658_2687_5812 892
177 3300049570 Ga0501033_0001542 Ga0501033_0001542_2000_5134 892
178 3300049571 Ga0501034_0001411 Ga0501034_0001411_12989_16114 892
179 3300049579 Ga0501043_0002444 Ga0501043_0002444_1853_4993 892
180 iso_pu_bacteria 2524614729 2525556415 892
181 iso_pu_bacteria 2547132130 2547503416 892
182 iso_pu_bacteria 2571042365 2572254440 892
183 iso_pu_bacteria 2576861471 2578457214 892
184 iso_pu_bacteria 2627854209 2630649644 892
185 iso_pu_bacteria 2643221559 2643816722 892
186 iso_pu_bacteria 2643221573 2643880902 892
187 iso_pu_bacteria 2643221586 2643938598 892
188 iso_pu_bacteria 2643221593 2643973827 892
189 iso_pu_bacteria 2643221612 2644077655 892
190 iso_pu_bacteria 2643221695 2644528313 892
191 iso_pu_bacteria 2643221720 2644661471 892
192 iso_pu_bacteria 2643221727 2644694030 892
193 iso_pu_bacteria 2643221728 2644699552 892
194 iso_pu_bacteria 2747842428 2747948331 892
195 iso_pu_bacteria 2747842501 2748016814 892
196 iso_pu_bacteria 2765235840 2765580287 892
197 iso_pu_bacteria 2816332141 2816518689 892
198 iso_pu_bacteria 2842391507 2842395598 892
199 iso_pu_bacteria 2842757796 2842759179 892
200 iso_pu_bacteria 2852649853 2852652342 892
201 iso_pu_bacteria 2857442823 2857445171 892
202 iso_pu_bacteria 2874220319 2874222957 892
203 iso_pu_bacteria 2919089067 2919092927 892
204 iso_pu_bacteria 2919130084 2919133930 892
205 iso_pu_bacteria 2919134579 2919138644 892
206 iso_pu_bacteria 2919497567 2919498283 892
207 iso_pu_bacteria 2928496128 2928499222 892
208 iso_pu_bacteria 2929195423 2929196582 892
209 iso_pu_bacteria 2931380184 2931383583 892
210 iso_pu_bacteria 2937610967 2937614925 892
211 iso_pu_bacteria 2939589442 2939589602 892
212 iso_pu_bacteria 2939622612 2939626090 892
213 iso_pu_bacteria 2939626828 2939630521 892
214 iso_pu_bacteria 2941475908 2941478959 892
215 iso_pu_bacteria 2941489479 2941494484 892
216 iso_pu_bacteria 2961047084 2961049722 892
217 iso_pu_bacteria 2961064222 2961066602 892
218 iso_pu_bacteria 2974307012 2974307843 892
219 iso_pu_bacteria 2977247770 2977248562 892
220 iso_pu_bacteria 2984514374 2984516951 892
221 iso_pu_bacteria 2987605356 2987608545 892
222 iso_pu_bacteria 2995948881 2995953120 892
223 iso_pu_bacteria 8003014200 8003016954 892
224 iso_pu_bacteria 8021622325 8021623328 892
225 iso_pu_bacteria 8021626552 8021627763 892
226 3300049568 Ga0501031_0013115 Ga0501031_0013115_2212_5352 893
227 3300049569 Ga0501032_0007085 Ga0501032_0007085_3347_6487 893
228 3300049573 Ga0501037_0007721 Ga0501037_0007721_1115_4255 893
229 3300049581 Ga0501047_0013682 Ga0501047_0013682_2419_5559 893
230 3300001989 JGI24739J22299_10007382 JGI24739J22299_100073823 896
231 3300005937 Ga0081455_10000089 Ga0081455_1000008973 896
232 3300046530 Ga0495654_0011692 Ga0495654_0011692_596_3706 896
233 3300046616 Ga0495668_0001725 Ga0495668_0001725_12624_15734 896
234 3300046616 Ga0495668_0010470 Ga0495668_0010470_987_4097 896
235 3300053116 Ga0500592_000238 Ga0500592_000238_2810_5923 896

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

3

1018

0.97

PF03176

MMPL

MMPL family

826

1032

0.83

PF03176

MMPL

MMPL family

287

512

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u8y-assembly1.cif.gz_C coupling of remote alternating-access transport mechanisms for protons and substrates in the multidrug efflux pump acrb 0.9506 1 871
7rr8-assembly1.cif.gz_C multidrug efflux pump subunit acrb 0.9484 1 869
4u95-assembly1.cif.gz_C coupling of remote alternating-access transport mechanisms for protons and substrates in the multidrug efflux pump acrb 0.9481 1 871
6zog-assembly1.cif.gz_C minocycline binding to the deep binding pocket of acrb-i38f_i671t 0.9471 1 872
6zof-assembly1.cif.gz_C fusidic acid binding to the tm7/tm8 groove of acrb-f380a t protomer 0.9459 1 872
ID Description Score Start End Superfamily
4zjlF05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9725 704 868 1.20.1640.10
af_Q2FVZ5_891_1052_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9691 714 869 1.20.1640.10
2hrtC01 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9649 189 350 1.20.1640.10
3w9iC05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9637 707 869 1.20.1640.10
3w9iD05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9633 715 872 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A2G0ZAS7-F1-model_v4 Acriflavine resistance protein B 0.9651 1 872 GO:0005886
GO:0042910
AF-A0A4R7A101-F1-model_v4 deleted 0.9643 1 868
AF-A0A644Z248-F1-model_v4 Efflux pump membrane transporter BepE 0.9617 2 874 GO:0005886
GO:0042910
AF-A0A2W4NSX9-F1-model_v4 Multidrug transporter AcrB 0.9616 684 888 GO:0005886
GO:0042910
AF-A0A355AMG5-F1-model_v4 AcrB/AcrD/AcrF family protein 0.9612 219 341 GO:0005886
GO:0042910

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pLDDT pTM Quality
85 0.74 High
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Predicted Structure (AlphaFold2)

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