F348176

General Info

Members Datasets Scaffolds Average Seq Length
235 167 470 469

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10006245|Ga0213872_100062453
Length 523
Sequence MRVSLGMSMRLTRPAVPLPLQGHVAARAEAGPVMSDAIETLTLSKDVKEIPPKAADLSAWYTAVCLKAELASYSPVRGCVVLRPYGYGLWENLQKHLDAAFKETGHENAYFPLLIPESLLLKEAEHVEGFAPEVAWVTRGGQEELTEPLAIRPTSEVIIGVMYAQWVESYRDLPILINQWANVLRWEKATRPFLRTMEFLWQEGHTAHAHAQEAREETLRMLDVYREFAENVAAVPVYAGIKSASERFPGAVETFSIEALMPDGKALQSATSHDLGQNFAKAYDIKFLDADQQIKYAYTTSWGMSWRMLGAMIMTHGDDRGLRIPPKMAPLEAVFVPIVRSGDDRAVAASRDAAAALRKAGFRVKVDDRDQQPGWKYAEWDVRGVPVRIEIGPRDVESGSAVLVRRDRAKGDPEQKQTVPLDQLAQRLRALLEDIQASLYAQAKQFLDEHTFVVRDRDEFFAKAKARAGMIDIAWCGRPECEELVKAETGATTRNTRPLDEPGARCVACGEPATVRAYFAQSY

Samples

Sample ID Description Type Environment
1 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
67 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
70 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
71 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
72 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
89 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
90 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
91 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
92 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
93 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
99 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
100 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
114 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
132 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
133 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
146 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
152 2506783011 Frankia datiscae Dg1 Isolate Nodule
153 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
154 2643221679 Angustibacter sp. Root456 Isolate Unclassified
155 2643221711 Terrabacter sp. Root85 Isolate Unclassified
156 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
157 2773857933 Frankia sp. BMG5.30 Isolate Nodule
158 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
159 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
160 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
161 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
162 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
163 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
164 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
165 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
166 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
167 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.34
Metatranscriptomes 0.85
Isolates 6.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.4
Nodule 0.85
Rhizoplane 6.38
Rhizosphere 77.45
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213872_10006245 3300021361 Bacteria 6018
2 JGI24740J21852_10005949 3300001979 Bacteria 5107
3 rootH1_10069582 3300003323 Unclassified 2816
4 Ga0070658_10003053 3300005327 Bacteria 13838
5 Ga0070676_10080115 3300005328 Bacteria 1979
6 Ga0070683_100001322 3300005329 Bacteria 18864
7 Ga0070691_10002862 3300005341 Bacteria 7727
8 Ga0070675_100048193 3300005354 Bacteria 3492
9 Ga0070714_100002707 3300005435 Bacteria 13058
10 Ga0070700_100039947 3300005441 Bacteria 2869
11 Ga0070708_100016528 3300005445 Bacteria 6126
12 Ga0070708_100021380 3300005445 Bacteria 5469
13 Ga0068853_100220328 3300005539 Bacteria 1732
14 Ga0068855_100000757 3300005563 Bacteria 39751
15 Ga0068855_100051742 3300005563 Bacteria 4837
16 Ga0070664_100030266 3300005564 Bacteria 4516
17 Ga0068854_100000023 3300005578 Bacteria 127086
18 Ga0068854_100093053 3300005578 Bacteria 2246
19 Ga0068852_100020790 3300005616 Bacteria 5223
20 Ga0068861_100067946 3300005719 Bacteria 2752
21 Ga0081455_10001024 3300005937 Bacteria 35221
22 Ga0081455_10041239 3300005937 Bacteria 4062
23 Ga0075364_10072946 3300006051 Bacteria 2262
24 Ga0075367_10022992 3300006178 Bacteria 3503
25 Ga0075428_100000189 3300006844 Bacteria 57957
26 Ga0075428_100004381 3300006844 Bacteria 15581
27 Ga0075430_100000344 3300006846 Bacteria 33696
28 Ga0075430_100000784 3300006846 Bacteria 24572
29 Ga0075431_100000453 3300006847 Bacteria 33729
30 Ga0075431_100013458 3300006847 Bacteria 8262
31 Ga0075429_100000313 3300006880 Bacteria 34623
32 Ga0075429_100021267 3300006880 Bacteria 5624
33 Ga0111539_10013005 3300009094 Bacteria 10414
34 Ga0111539_10141657 3300009094 Bacteria 2815
35 Ga0114129_10000719 3300009147 Bacteria 41930
36 Ga0114129_10006488 3300009147 Bacteria 16596
37 Ga0114129_10214360 3300009147 Bacteria 2601
38 Ga0105241_10057626 3300009174 Bacteria 2981
39 Ga0105248_10000023 3300009177 Bacteria 264241
40 Ga0105237_10000013 3300009545 Bacteria 297699
41 Ga0105238_10055057 3300009551 Bacteria 3994
42 Ga0105249_10031814 3300009553 Bacteria 4773
43 Ga0105249_10074326 3300009553 Bacteria 3146
44 Ga0157369_10239737 3300013105 Bacteria 1894
45 Ga0157374_10031586 3300013296 Bacteria 4815
46 Ga0163163_10022573 3300014325 Bacteria 5962
47 Ga0213874_10004289 3300021377 Bacteria 3236
48 Ga0213875_10000001 3300021388 Bacteria 2793540
49 Ga0213875_10021427 3300021388 Bacteria 3096
50 Ga0213875_10033610 3300021388 Bacteria 2423
51 Ga0207671_10000024 3300025914 Bacteria 274628
52 Ga0207694_10109565 3300025924 Bacteria 2196
53 Ga0207650_10076158 3300025925 Bacteria 2534
54 Ga0207664_10005088 3300025929 Bacteria 8961
55 Ga0207644_10015267 3300025931 Bacteria 5152
56 Ga0207670_10070194 3300025936 Bacteria 2419
57 Ga0207711_10000262 3300025941 Bacteria 57199
58 Ga0207689_10076715 3300025942 Bacteria 2747
59 Ga0207661_10005837 3300025944 Bacteria 8685
60 Ga0207679_10011180 3300025945 Bacteria 5799
61 Ga0207667_10000101 3300025949 Bacteria 137935
62 Ga0207667_10007194 3300025949 Bacteria 13426
63 Ga0207667_10122945 3300025949 Bacteria 2674
64 Ga0207712_10078967 3300025961 Bacteria 2389
65 Ga0207640_10003926 3300025981 Bacteria 8019
66 Ga0207640_10048853 3300025981 Bacteria 2737
67 Ga0207677_10032827 3300026023 Bacteria 3341
68 Ga0207708_10056132 3300026075 Bacteria 3004
69 Ga0207675_100021811 3300026118 Bacteria 5963
70 Ga0207428_10019379 3300027907 Bacteria 5802
71 Ga0265356_1000022 3300028017 Bacteria 24320
72 Ga0268266_10053635 3300028379 Bacteria 3464
73 Ga0268265_10132468 3300028380 Bacteria 2074
74 Ga0307515_10074821 3300028794 Bacteria 4523
75 Ga0265338_10000170 3300028800 Bacteria 120070
76 Ga0265770_1003663 3300030878 Bacteria 2088
77 Ga0265760_10006314 3300031090 Bacteria 3392
78 Ga0265332_10005603 3300031238 Bacteria 5781
79 Ga0265325_10000069 3300031241 Bacteria 71127
80 Ga0265325_10004591 3300031241 Bacteria 8678
81 Ga0265339_10002526 3300031249 Bacteria 13068
82 Ga0265313_10000065 3300031595 Bacteria 103210
83 Ga0307508_10065033 3300031616 Bacteria 3214
84 Ga0265342_10018457 3300031712 Bacteria 4518
85 Ga0307516_10000003 3300031730 Bacteria 459377
86 Ga0307405_10048377 3300031731 Bacteria 2622
87 Ga0307407_10006719 3300031903 Bacteria 5147
88 Ga0373951_0000004 3300035091 Bacteria 95240
89 Ga0373932_0000370 3300035112 Bacteria 13862
90 Ga0373931_0000010 3300035691 Bacteria 334069
91 Ga0373931_0000405 3300035691 Bacteria 17635
92 Ga0373947_0073627 3300035725 Bacteria 2100
93 Ga0395899_0001509 3300037312 Bacteria 19721
94 Ga0395900_0030733 3300037418 Bacteria 5515
95 Ga0395900_0067368 3300037418 Bacteria 3678
96 Ga0395898_0013148 3300037466 Bacteria 8532
97 Ga0436364_0273345 3300037853 Bacteria 2794207
98 Ga0436364_0507714 3300037853 Bacteria 2772
99 Ga0436364_0551951 3300037853 Bacteria 7575
100 Ga0436364_0643201 3300037853 Bacteria 4696
101 Ga0436364_1228610 3300037853 Bacteria 1709
102 Ga0395901_0013983 3300038443 Bacteria 8167
103 Ga0395901_0027011 3300038443 Bacteria 5895
104 Ga0436365_0840181 3300039437 Bacteria 2282
105 Ga0436365_1168654 3300039437 Bacteria 11360
106 Ga0436365_1488342 3300039437 Bacteria 12867
107 Ga0436360_0464299 3300039438 Bacteria 24721
108 Ga0436360_0578083 3300039438 Bacteria 1970
109 Ga0436360_0641927 3300039438 Bacteria 5055
110 Ga0436360_0693758 3300039438 Bacteria 3605
111 Ga0436360_0755451 3300039438 Bacteria 4635
112 Ga0436360_1179490 3300039438 Bacteria 1406
113 Ga0436361_0049874 3300039447 Bacteria 27529
114 Ga0436361_0507619 3300039447 Bacteria 5321
115 Ga0436361_0673973 3300039447 Bacteria 1408
116 Ga0436361_0931085 3300039447 Bacteria 5694
117 Ga0436361_0993138 3300039447 Bacteria 10389
118 Ga0436361_1191876 3300039447 Bacteria 2311
119 Ga0436363_0752326 3300039450 Bacteria 6083
120 Ga0436363_1152964 3300039450 Bacteria 5494
121 Ga0436363_1315975 3300039450 Bacteria 20315
122 Ga0436362_0172514 3300039453 Bacteria 5832
123 Ga0436362_0489940 3300039453 Bacteria 2991
124 Ga0436362_0962734 3300039453 Bacteria 5412
125 Ga0436362_1249588 3300039453 Bacteria 3781
126 Ga0436362_1262859 3300039453 Bacteria 6145
127 Ga0466966_0007322 3300044684 Bacteria 7316
128 Ga0466970_0000099 3300044765 Bacteria 37481
129 Ga0466958_0004221 3300045836 Bacteria 7557
130 Ga0466967_0002102 3300045976 Bacteria 12215
131 Ga0466967_0004431 3300045976 Bacteria 9464
132 Ga0495628_0025527 3300046516 Bacteria 4827
133 Ga0495630_0102144 3300046517 Bacteria 2169
134 Ga0495648_0012083 3300046524 Bacteria 6464
135 Ga0495640_0096164 3300046533 Bacteria 1949
136 Ga0495586_0049857 3300046535 Bacteria 2264
137 Ga0495667_0012026 3300046559 Bacteria 5862
138 Ga0495657_0005873 3300046675 Bacteria 9652
139 Ga0495658_0112158 3300046683 Bacteria 1641
140 Ga0495613_0010745 3300046689 Bacteria 6790
141 Ga0495604_0014931 3300047317 Bacteria 6196
142 Ga0495672_0002640 3300047320 Bacteria 16182
143 Ga0495680_0006179 3300047322 Bacteria 11172
144 Ga0495680_0051663 3300047322 Bacteria 3208
145 Ga0495675_0041251 3300047444 Bacteria 2942
146 Ga0495602_0255440 3300048088 Bacteria 1303
147 Ga0496100_0018784 3300048903 Bacteria 4109
148 Ga0496100_0107320 3300048903 Bacteria 1934
149 Ga0496101_0007894 3300048904 Bacteria 6925
150 Ga0496101_0013478 3300048904 Bacteria 5479
151 Ga0496102_0004982 3300048905 Bacteria 11245
152 Ga0496102_0070205 3300048905 Bacteria 3216
153 Ga0496103_0016476 3300048906 Bacteria 4410
154 Ga0496104_0002803 3300048907 Bacteria 15025
155 Ga0496105_0003136 3300048908 Bacteria 12170
156 Ga0496106_0004543 3300048909 Bacteria 10283
157 Ga0496107_0023774 3300048910 Bacteria 4331
158 Ga0496110_0001141 3300048913 Bacteria 18800
159 Ga0496114_0004247 3300048917 Bacteria 11099
160 Ga0496114_0059238 3300048917 Bacteria 3199
161 Ga0496118_0013542 3300048921 Bacteria 7703
162 Ga0496119_0000133 3300048922 Bacteria 104400
163 Ga0496120_0089057 3300048923 Bacteria 1653
164 Ga0496121_0007859 3300048924 Bacteria 12755
165 Ga0501033_0001447 3300049570 Bacteria 21056
166 Ga0501033_0100083 3300049570 Bacteria 2116
167 Ga0501034_0001515 3300049571 Bacteria 30517
168 Ga0501034_0164411 3300049571 Bacteria 2188
169 Ga0501034_0338822 3300049571 Bacteria 1434
170 Ga0501036_0036461 3300049572 Bacteria 4162
171 Ga0501037_0001369 3300049573 Bacteria 17894
172 Ga0501038_0039585 3300049574 Bacteria 4123
173 Ga0501038_0102197 3300049574 Bacteria 2386
174 Ga0501039_0028900 3300049575 Bacteria 4269
175 Ga0501041_0067040 3300049577 Bacteria 2200
176 Ga0501042_0149808 3300049578 Bacteria 1682
177 Ga0501043_0020662 3300049579 Bacteria 5165
178 Ga0501043_0185889 3300049579 Bacteria 1618
179 Ga0501046_0002305 3300049580 Bacteria 17994
180 Ga0501046_0021070 3300049580 Bacteria 5382
181 Ga0501047_0000714 3300049581 Bacteria 34622
182 Ga0501048_0233758 3300049582 Bacteria 1304
183 Ga0501068_0002355 3300049584 Bacteria 10054
184 Ga0501068_0067217 3300049584 Bacteria 2183
185 Ga0501069_0050007 3300049585 Bacteria 2324
186 Ga0501070_0051459 3300049586 Bacteria 3419
187 Ga0501070_0089199 3300049586 Bacteria 2552
188 Ga0501071_0025350 3300049587 Bacteria 4153
189 Ga0501071_0026845 3300049587 Bacteria 4046
190 Ga0501072_0004876 3300049588 Bacteria 10204
191 Ga0501072_0069346 3300049588 Bacteria 2784
192 Ga0501073_0000162 3300049589 Bacteria 43603
193 Ga0501074_0002803 3300049590 Bacteria 12197
194 Ga0501079_0136671 3300049741 Bacteria 1909
195 Ga0501080_0001710 3300049742 Bacteria 18740
196 Ga0501080_0108860 3300049742 Bacteria 2568
197 Ga0501035_0000853 3300049822 Bacteria 32534
198 Ga0501035_0049258 3300049822 Bacteria 3776
199 Ga0501044_0001079 3300049823 Bacteria 32595
200 Ga0501044_0013311 3300049823 Bacteria 8905
201 Ga0501044_0082808 3300049823 Bacteria 3245
202 nmdc:mga0yw44_2856_c1 3300050492 Bacteria 7508
203 nmdc:mga0yw44_53701_c1 3300050492 Bacteria 2447
204 nmdc:mga05p37_1575_c1 3300050507 Bacteria 26515
205 nmdc:mga09592_3880_c1 3300050508 Bacteria 12044
206 nmdc:mga0qj67_25219_c1 3300050509 Bacteria 4592
207 nmdc:mga0qj67_287_c1 3300050509 Bacteria 35118
208 nmdc:mga0qj67_861_c1 3300050509 Bacteria 20820
209 nmdc:mga06r32_116054_c1 3300050510 Bacteria 2637
210 nmdc:mga06r32_1188_c1 3300050510 Bacteria 23416
211 nmdc:mga08y16_9166_c1 3300050511 Bacteria 10388
212 Ga0495595_0004762 3300053084 Bacteria 5461
213 Ga0500646_0000320 3300053090 Bacteria 14742
214 Ga0500583_0020047 3300053092 Bacteria 2753
215 Ga0500566_0001895 3300053094 Bacteria 12304
216 Ga0500566_0065904 3300053094 Bacteria 2042
217 Ga0501084_0020700 3300054114 Bacteria 5487
218 Ga0501082_0119420 3300060353 Bacteria 2285
219 Ga0530510_0001615 3300061734 Bacteria 15214
220 2506868858 2506783011 Bacteria 5323186
221 2515857491 2515154155 Bacteria 7985436
222 2644446372 2643221679 Bacteria 3839507
223 2644607391 2643221711 Bacteria 4865335
224 2676474023 2675903058 Bacteria 6822861
225 2774901719 2773857933 Bacteria 5818019
226 2793977137 2791355406 Bacteria 11364898
227 2819665483 2818991458 Bacteria 4794049
228 2827628912 2827628540 Bacteria 6858585
229 2861520639 2861520306 Bacteria 8348283
230 2870786951 2870782633 Bacteria 9624083
231 8047895835 8047893842 Bacteria 11723082
232 8048363099 8048356638 Bacteria 11044339
233 8048372859 8048369669 Bacteria 11666822
234 8048381793 8048379754 Bacteria 11877923
235 8057568980 8057568493 Bacteria 7221719
236 Ga0213872_10006245
237 JGI24740J21852_10005949
238 rootH1_10069582
239 Ga0070658_10003053
240 Ga0070676_10080115
241 Ga0070683_100001322
242 Ga0070691_10002862
243 Ga0070675_100048193
244 Ga0070714_100002707
245 Ga0070700_100039947
246 Ga0070708_100016528
247 Ga0070708_100021380
248 Ga0068853_100220328
249 Ga0068855_100000757
250 Ga0068855_100051742
251 Ga0070664_100030266
252 Ga0068854_100000023
253 Ga0068854_100093053
254 Ga0068852_100020790
255 Ga0068861_100067946
256 Ga0081455_10001024
257 Ga0081455_10041239
258 Ga0075364_10072946
259 Ga0075367_10022992
260 Ga0075428_100000189
261 Ga0075428_100004381
262 Ga0075430_100000344
263 Ga0075430_100000784
264 Ga0075431_100000453
265 Ga0075431_100013458
266 Ga0075429_100000313
267 Ga0075429_100021267
268 Ga0111539_10013005
269 Ga0111539_10141657
270 Ga0114129_10000719
271 Ga0114129_10006488
272 Ga0114129_10214360
273 Ga0105241_10057626
274 Ga0105248_10000023
275 Ga0105237_10000013
276 Ga0105238_10055057
277 Ga0105249_10031814
278 Ga0105249_10074326
279 Ga0157369_10239737
280 Ga0157374_10031586
281 Ga0163163_10022573
282 Ga0213874_10004289
283 Ga0213875_10000001
284 Ga0213875_10021427
285 Ga0213875_10033610
286 Ga0207671_10000024
287 Ga0207694_10109565
288 Ga0207650_10076158
289 Ga0207664_10005088
290 Ga0207644_10015267
291 Ga0207670_10070194
292 Ga0207711_10000262
293 Ga0207689_10076715
294 Ga0207661_10005837
295 Ga0207679_10011180
296 Ga0207667_10000101
297 Ga0207667_10007194
298 Ga0207667_10122945
299 Ga0207712_10078967
300 Ga0207640_10003926
301 Ga0207640_10048853
302 Ga0207677_10032827
303 Ga0207708_10056132
304 Ga0207675_100021811
305 Ga0207428_10019379
306 Ga0265356_1000022
307 Ga0268266_10053635
308 Ga0268265_10132468
309 Ga0307515_10074821
310 Ga0265338_10000170
311 Ga0265770_1003663
312 Ga0265760_10006314
313 Ga0265332_10005603
314 Ga0265325_10000069
315 Ga0265325_10004591
316 Ga0265339_10002526
317 Ga0265313_10000065
318 Ga0307508_10065033
319 Ga0265342_10018457
320 Ga0307516_10000003
321 Ga0307405_10048377
322 Ga0307407_10006719
323 Ga0373951_0000004
324 Ga0373932_0000370
325 Ga0373931_0000010
326 Ga0373931_0000405
327 Ga0373947_0073627
328 Ga0395899_0001509
329 Ga0395900_0030733
330 Ga0395900_0067368
331 Ga0395898_0013148
332 Ga0436364_0273345
333 Ga0436364_0507714
334 Ga0436364_0551951
335 Ga0436364_0643201
336 Ga0436364_1228610
337 Ga0395901_0013983
338 Ga0395901_0027011
339 Ga0436365_0840181
340 Ga0436365_1168654
341 Ga0436365_1488342
342 Ga0436360_0464299
343 Ga0436360_0578083
344 Ga0436360_0641927
345 Ga0436360_0693758
346 Ga0436360_0755451
347 Ga0436360_1179490
348 Ga0436361_0049874
349 Ga0436361_0507619
350 Ga0436361_0673973
351 Ga0436361_0931085
352 Ga0436361_0993138
353 Ga0436361_1191876
354 Ga0436363_0752326
355 Ga0436363_1152964
356 Ga0436363_1315975
357 Ga0436362_0172514
358 Ga0436362_0489940
359 Ga0436362_0962734
360 Ga0436362_1249588
361 Ga0436362_1262859
362 Ga0466966_0007322
363 Ga0466970_0000099
364 Ga0466958_0004221
365 Ga0466967_0002102
366 Ga0466967_0004431
367 Ga0495628_0025527
368 Ga0495630_0102144
369 Ga0495648_0012083
370 Ga0495640_0096164
371 Ga0495586_0049857
372 Ga0495667_0012026
373 Ga0495657_0005873
374 Ga0495658_0112158
375 Ga0495613_0010745
376 Ga0495604_0014931
377 Ga0495672_0002640
378 Ga0495680_0006179
379 Ga0495680_0051663
380 Ga0495675_0041251
381 Ga0495602_0255440
382 Ga0496100_0018784
383 Ga0496100_0107320
384 Ga0496101_0007894
385 Ga0496101_0013478
386 Ga0496102_0004982
387 Ga0496102_0070205
388 Ga0496103_0016476
389 Ga0496104_0002803
390 Ga0496105_0003136
391 Ga0496106_0004543
392 Ga0496107_0023774
393 Ga0496110_0001141
394 Ga0496114_0004247
395 Ga0496114_0059238
396 Ga0496118_0013542
397 Ga0496119_0000133
398 Ga0496120_0089057
399 Ga0496121_0007859
400 Ga0501033_0001447
401 Ga0501033_0100083
402 Ga0501034_0001515
403 Ga0501034_0164411
404 Ga0501034_0338822
405 Ga0501036_0036461
406 Ga0501037_0001369
407 Ga0501038_0039585
408 Ga0501038_0102197
409 Ga0501039_0028900
410 Ga0501041_0067040
411 Ga0501042_0149808
412 Ga0501043_0020662
413 Ga0501043_0185889
414 Ga0501046_0002305
415 Ga0501046_0021070
416 Ga0501047_0000714
417 Ga0501048_0233758
418 Ga0501068_0002355
419 Ga0501068_0067217
420 Ga0501069_0050007
421 Ga0501070_0051459
422 Ga0501070_0089199
423 Ga0501071_0025350
424 Ga0501071_0026845
425 Ga0501072_0004876
426 Ga0501072_0069346
427 Ga0501073_0000162
428 Ga0501074_0002803
429 Ga0501079_0136671
430 Ga0501080_0001710
431 Ga0501080_0108860
432 Ga0501035_0000853
433 Ga0501035_0049258
434 Ga0501044_0001079
435 Ga0501044_0013311
436 Ga0501044_0082808
437 nmdc:mga0yw44_2856_c1
438 nmdc:mga0yw44_53701_c1
439 nmdc:mga05p37_1575_c1
440 nmdc:mga09592_3880_c1
441 nmdc:mga0qj67_25219_c1
442 nmdc:mga0qj67_287_c1
443 nmdc:mga0qj67_861_c1
444 nmdc:mga06r32_116054_c1
445 nmdc:mga06r32_1188_c1
446 nmdc:mga08y16_9166_c1
447 Ga0495595_0004762
448 Ga0500646_0000320
449 Ga0500583_0020047
450 Ga0500566_0001895
451 Ga0500566_0065904
452 Ga0501084_0020700
453 Ga0501082_0119420
454 Ga0530510_0001615
455 2506868858
456 2515857491
457 2644446372
458 2644607391
459 2676474023
460 2774901719
461 2793977137
462 2819665483
463 2827628912
464 2861520639
465 2870786951
466 8047895835
467 8048363099
468 8048372859
469 8048381793
470 8057568980

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

136

316

0.91

PF09180

ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

457

523

0.9

PF03129

HGTP_anticodon

Anticodon binding domain

332

431

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f9c-assembly1.cif.gz_A homo sapiens prolyl-trna synthetase (hsprs) in complex with l-proline and compound l96 0.9411 9 472
7f9d-assembly1.cif.gz_B homo sapiens prolyl-trna synthetase (hsprs) in complex with l-proline and compound l96 0.9403 6 472
7f9b-assembly1.cif.gz_A homo sapiens prolyl-trna synthetase (hsprs) in complex with l-proline and compound l95 0.9403 6 472
7y3s-assembly1.cif.gz_B controlling fibrosis using compound with novel binding mode to prolyl-trna synthetase 1 0.9401 6 472
7y28-assembly1.cif.gz_B controlling fibrosis using compound with novel binding mode to prolyl-trna synthetase 1 0.9398 9 472
ID Description Score Start End Superfamily
af_Q0D8E4_1_175_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9893 109 284 3.30.930.10
af_Q0D8E4_1_175_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9837 109 284 3.30.930.10
1hc7D01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9804 5 284 3.30.930.10
1hc7D01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9768 5 284 3.30.930.10
af_A0A0G2JZI2_1016_1296_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9761 9 284 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A0F9H8D2-F1-model_v4 proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) 0.994 8 246 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A2V7V8F3-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.9885 142 291 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A3D4X1N5-F1-model_v4 Proline--tRNA ligase 0.9856 172 472 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A3D4X1N5-F1-model_v4 Proline--tRNA ligase 0.9823 172 472 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A6L6BXM0-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) 0.9794 4 203 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101

Map