F348247

General Info

Members Datasets Scaffolds Average Seq Length
235 173 470 174

Family's Representative Sequence

Representative Sequence 3300028381|Ga0268264_10910653|Ga0268264_109106531
Length 202
Sequence MIKYQPSGKINFALLTLNLFPDLNIHQMRKIILSLAVSLDGFIEGPNGEYDWCFTDQDYGMSDFFKRIDSVFMGRKSYELAQSMGDAAMPGFPKLKEYVFSNTLQTVKKDVIVISGNIVEQVNKIRNEPGRDIWLFGGAALTTSMMNLGLVDEIWLAVHPILLGSGKYCFSHLDHRVHLDLVETKPYSTGLVSLTYTVVHNQ

Samples

Sample ID Description Type Environment
1 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
4 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
30 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
31 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
116 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
117 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
118 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
119 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
120 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
121 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
122 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
123 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
144 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
145 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
146 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
147 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
148 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
149 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
152 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
153 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
154 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
155 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
156 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
159 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
160 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
161 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
162 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
163 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
164 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
165 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
168 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
169 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
170 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
171 2738543023 Pedobacter sp. OK628 Isolate Unclassified
172 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
173 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.87
Metatranscriptomes 0.43
Isolates 1.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.36
Nodule 0
Rhizoplane 1.7
Rhizosphere 80.43
Stem 0
Stem Tuber 0
Unclassified 20.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268264_10910653 3300028381 Bacteria 883
2 SwRhRL2b_contig_1567641 2162886007 Bacteria 114185
3 SwRhRL2b_contig_2942017 2162886007 Bacteria 1236
4 SwRhRL2b_contig_676118 2162886007 Bacteria 147446
5 MBSR1b_contig_795359 2162886012 Bacteria 997
6 JGI25158J39367_1011891 3300002739 Bacteria 1153
7 rootH1_10037176 3300003316 Bacteria 6451
8 rootH1_10108694 3300003316 Unclassified 1366
9 rootH2_10184735 3300003320 Unclassified 1476
10 rootH2_10184985 3300003320 Bacteria 4613
11 rootH2_10186938 3300003320 Bacteria 2473
12 rootH2_10252069 3300003320 Bacteria 1377
13 rootL2_10142269 3300003322 Bacteria 5907
14 rootL2_10346340 3300003322 Bacteria 1322
15 rootL2_10350049 3300003322 Bacteria 1052
16 rootH1_10025354 3300003323 Bacteria 3692
17 rootH1_10164354 3300003323 Bacteria 3737
18 rootH1_10208800 3300003323 Unclassified 3270
19 Ga0055536_1000036 3300003781 Bacteria 141730
20 Ga0055530_10000851 3300003791 Bacteria 25181
21 Ga0055531_10000066 3300003794 Bacteria 115693
22 Ga0055531_10000128 3300003794 Bacteria 85521
23 Ga0065714_10078062 3300005288 Bacteria 2633
24 Ga0065704_10070136 3300005289 Bacteria 560402
25 Ga0065704_10092042 3300005289 Bacteria 2651
26 Ga0065704_10186642 3300005289 Unclassified 1210
27 Ga0065704_10384833 3300005289 Bacteria 769
28 Ga0065715_10328624 3300005293 Bacteria 988
29 Ga0065707_10304655 3300005295 Bacteria 997
30 Ga0070658_10757515 3300005327 Unclassified 843
31 Ga0070676_10170120 3300005328 Bacteria 1409
32 Ga0070690_100503797 3300005330 Bacteria 906
33 Ga0070670_100133715 3300005331 Unclassified 2143
34 Ga0070670_100360506 3300005331 Bacteria 1278
35 Ga0070670_100452276 3300005331 Unclassified 1138
36 Ga0068869_100021412 3300005334 Bacteria 4448
37 Ga0070680_100001415 3300005336 Bacteria 17343
38 Ga0070680_100747193 3300005336 Bacteria 842
39 Ga0070660_100022871 3300005339 Bacteria 4628
40 Ga0070689_100288045 3300005340 Bacteria 1364
41 Ga0070668_100024075 3300005347 Unclassified 4611
42 Ga0070675_100007506 3300005354 Bacteria 8429
43 Ga0070673_100169674 3300005364 Bacteria 1861
44 Ga0070673_100643205 3300005364 Unclassified 970
45 Ga0070688_100020099 3300005365 Bacteria 3878
46 Ga0070688_100204281 3300005365 Unclassified 1384
47 Ga0070667_100454660 3300005367 Bacteria 1170
48 Ga0070709_10740981 3300005434 Bacteria 767
49 Ga0070700_100037439 3300005441 Bacteria 2950
50 Ga0070694_100585239 3300005444 Bacteria 897
51 Ga0070662_100019415 3300005457 Bacteria 4614
52 Ga0070681_10080925 3300005458 Bacteria 3204
53 Ga0068867_100499898 3300005459 Bacteria 1045
54 Ga0070679_100006325 3300005530 Bacteria 11025
55 Ga0070679_100401317 3300005530 Bacteria 1317
56 Ga0070684_100045625 3300005535 Bacteria 3795
57 Ga0070684_100458978 3300005535 Bacteria 1178
58 Ga0070672_100383933 3300005543 Bacteria 1202
59 Ga0070686_100111936 3300005544 Bacteria 1861
60 Ga0070686_100488566 3300005544 Bacteria 953
61 Ga0070665_100957866 3300005548 Bacteria 868
62 Ga0070665_101358155 3300005548 Unclassified 720
63 Ga0068855_100133820 3300005563 Bacteria 2829
64 Ga0068859_100174042 3300005617 Bacteria 2234
65 Ga0068859_100930302 3300005617 Bacteria 953
66 Ga0068864_100071624 3300005618 Unclassified 3019
67 Ga0068861_100025664 3300005719 Bacteria 4276
68 Ga0068870_10094678 3300005840 Bacteria 1677
69 Ga0068863_100626027 3300005841 Unclassified 1066
70 Ga0068863_101415377 3300005841 Bacteria 703
71 Ga0068862_100142054 3300005844 Bacteria 2132
72 Ga0070716_100041944 3300006173 Bacteria 2552
73 Ga0075366_10308324 3300006195 Bacteria 969
74 Ga0097621_100780810 3300006237 Unclassified 884
75 Ga0068871_100237854 3300006358 Bacteria 1582
76 Ga0068871_100306714 3300006358 Unclassified 1395
77 Ga0068865_101348009 3300006881 Bacteria 636
78 Ga0097620_100174044 3300006931 Bacteria 2234
79 Ga0097620_100930206 3300006931 Bacteria 953
80 Ga0105240_10000071 3300009093 Bacteria 204197
81 Ga0105240_10001541 3300009093 Bacteria 39132
82 Ga0105240_11834111 3300009093 Bacteria 632
83 Ga0105247_10819095 3300009101 Unclassified 712
84 Ga0105241_10203953 3300009174 Bacteria 1653
85 Ga0105241_10283679 3300009174 Bacteria 1415
86 Ga0105237_10005058 3300009545 Bacteria 14986
87 Ga0105237_10014233 3300009545 Bacteria 8329
88 Ga0105238_10187933 3300009551 Bacteria 2042
89 Ga0105249_10006720 3300009553 Bacteria 10016
90 Ga0105239_10000662 3300010375 Bacteria 49050
91 Ga0157371_10040466 3300013102 Bacteria 3328
92 Ga0157371_10051177 3300013102 Bacteria 2935
93 Ga0157370_10178086 3300013104 Unclassified 1976
94 Ga0157370_10247155 3300013104 Bacteria 1650
95 Ga0157370_10275899 3300013104 Bacteria 1553
96 Ga0157370_10462613 3300013104 Bacteria 1166
97 Ga0157369_10074132 3300013105 Bacteria 3650
98 Ga0157369_10587958 3300013105 Unclassified 1150
99 Ga0157374_10310354 3300013296 Bacteria 1561
100 Ga0163162_10989314 3300013306 Unclassified 951
101 Ga0157372_10058251 3300013307 Bacteria 4318
102 Ga0157372_10121250 3300013307 Bacteria 3003
103 Ga0157372_10288165 3300013307 Bacteria 1909
104 Ga0157372_10735249 3300013307 Bacteria 1147
105 Ga0157380_10124666 3300014326 Bacteria 2187
106 Ga0157380_11009517 3300014326 Unclassified 866
107 Ga0157377_10903274 3300014745 Bacteria 660
108 Ga0157376_10111950 3300014969 Bacteria 2404
109 Ga0209676_1000008 3300025292 Bacteria 991778
110 Ga0209050_1000180 3300025298 Bacteria 142987
111 Ga0209257_1000005 3300025304 Bacteria 1592528
112 Ga0209257_1000025 3300025304 Bacteria 724838
113 Ga0207697_10025052 3300025315 Unclassified 2440
114 Ga0207645_10785255 3300025907 Bacteria 647
115 Ga0207643_10413640 3300025908 Bacteria 854
116 Ga0207695_10003159 3300025913 Bacteria 23494
117 Ga0207671_10036244 3300025914 Bacteria 3658
118 Ga0207657_10014423 3300025919 Bacteria 7719
119 Ga0207657_10221647 3300025919 Bacteria 1515
120 Ga0207652_10000168 3300025921 Bacteria 71181
121 Ga0207652_10356649 3300025921 Bacteria 1320
122 Ga0207652_11080444 3300025921 Unclassified 703
123 Ga0207681_10036329 3300025923 Bacteria 3250
124 Ga0207694_10292646 3300025924 Bacteria 1339
125 Ga0207650_10394951 3300025925 Bacteria 1144
126 Ga0207659_10118838 3300025926 Unclassified 2022
127 Ga0207690_10795725 3300025932 Bacteria 781
128 Ga0207706_10050569 3300025933 Bacteria 3672
129 Ga0207689_10055779 3300025942 Bacteria 3251
130 Ga0207667_10689991 3300025949 Bacteria 1024
131 Ga0207712_10167494 3300025961 Bacteria 1714
132 Ga0207668_10299082 3300025972 Bacteria 1327
133 Ga0207668_11155380 3300025972 Bacteria 695
134 Ga0207708_10189605 3300026075 Bacteria 1636
135 Ga0207641_10334075 3300026088 Unclassified 1440
136 Ga0207648_10322442 3300026089 Bacteria 1388
137 Ga0207676_10099115 3300026095 Unclassified 2411
138 Ga0207674_10017212 3300026116 Bacteria 7886
139 Ga0207674_10257492 3300026116 Unclassified 1692
140 Ga0207675_100016538 3300026118 Bacteria 6888
141 Ga0307515_10000007 3300028794 Bacteria 719669
142 Ga0265760_10005466 3300031090 Bacteria 3641
143 Ga0265327_10000026 3300031251 Bacteria 379288
144 Ga0307509_10020778 3300031507 Bacteria 7446
145 Ga0307408_100447295 3300031548 Unclassified 1120
146 Ga0307514_10369060 3300031649 Bacteria 753
147 Ga0307405_10024780 3300031731 Unclassified 3434
148 Ga0307405_10335019 3300031731 Bacteria 1161
149 Ga0307407_10091657 3300031903 Unclassified 1864
150 Ga0307409_100005651 3300031995 Bacteria 7240
151 Ga0307416_100008473 3300032002 Bacteria 6640
152 Ga0307416_100068788 3300032002 Bacteria 2927
153 Ga0307416_101228771 3300032002 Bacteria 855
154 Ga0307415_100019366 3300032126 Bacteria 4131
155 Ga0316212_1039499 3300033547 Unclassified 666
156 Ga0373927_0010682 3300035695 Bacteria 6117
157 Ga0373937_1475890 3300036401 Bacteria 628
158 Ga0316582_0492494 3300036647 Bacteria 845
159 Ga0395899_0000806 3300037312 Bacteria 30625
160 Ga0395899_0006304 3300037312 Bacteria 9178
161 Ga0395899_0011015 3300037312 Bacteria 6926
162 Ga0395900_0001707 3300037418 Bacteria 25467
163 Ga0395900_0021120 3300037418 Bacteria 6654
164 Ga0395900_0062550 3300037418 Bacteria 3826
165 Ga0395898_0000688 3300037466 Bacteria 60735
166 Ga0395898_0144456 3300037466 Bacteria 2277
167 Ga0395898_0324710 3300037466 Bacteria 1468
168 Ga0395905_0101294 3300037471 Bacteria 2704
169 Ga0395901_0001896 3300038443 Bacteria 21588
170 Ga0395901_0013137 3300038443 Bacteria 8406
171 Ga0451791_0207179 3300041451 Unclassified 657
172 Ga0451802_1671588 3300041460 Bacteria 773
173 Ga0451837_1173622 3300041494 Unclassified 585
174 Ga0439431_0040395 3300041997 Unclassified 1186
175 Ga0439431_0135687 3300041997 Unclassified 693
176 Ga0439433_0090885 3300041999 Bacteria 750
177 Ga0439445_0021731 3300042004 Unclassified 1614
178 Ga0439462_0037892 3300042015 Unclassified 1285
179 Ga0450898_000916 3300042134 Bacteria 3700
180 Ga0439434_0004892 3300042435 Bacteria 3919
181 Ga0451577_0033640 3300042876 Bacteria 4622
182 Ga0453683_0000679 3300044673 Bacteria 36072
183 Ga0466961_0007137 3300044693 Bacteria 7108
184 Ga0466963_0419050 3300044694 Bacteria 944
185 Ga0453684_0005662 3300044712 Bacteria 24532
186 Ga0453684_0042651 3300044712 Bacteria 6114
187 Ga0451576_0006538 3300045051 Bacteria 14266
188 Ga0495638_0370210 3300046460 Bacteria 751
189 Ga0495605_0036869 3300046474 Bacteria 2463
190 Ga0495606_0002426 3300046507 Bacteria 21733
191 Ga0495608_0414137 3300046511 Bacteria 823
192 Ga0495630_0323069 3300046517 Bacteria 1180
193 Ga0495625_0000923 3300046660 Bacteria 39492
194 Ga0495661_0003703 3300046665 Bacteria 11229
195 Ga0495661_0014166 3300046665 Bacteria 5342
196 Ga0495672_0020042 3300047320 Bacteria 4393
197 Ga0495680_0661667 3300047322 Bacteria 693
198 Ga0495686_0007422 3300047472 Bacteria 8223
199 Ga0495686_0067023 3300047472 Unclassified 2217
200 Ga0496112_0470663 3300048915 Bacteria 1194
201 Ga0496115_1140537 3300048918 Bacteria 589
202 Ga0496116_0004698 3300048919 Bacteria 12905
203 Ga0501290_027795 3300049513 Unclassified 799
204 Ga0501199_010374 3300049650 Unclassified 995
205 Ga0501202_006062 3300049652 Bacteria 2153
206 Ga0501223_013151 3300049663 Unclassified 1649
207 Ga0501227_131092 3300049665 Bacteria 682
208 Ga0501235_008370 3300049669 Bacteria 2257
209 Ga0501225_0005475 3300049705 Unclassified 3727
210 Ga0501083_0000173 3300049744 Bacteria 41690
211 Ga0501268_010588 3300049765 Unclassified 1439
212 Ga0501274_006407 3300049771 Unclassified 1014
213 Ga0501274_018370 3300049771 Unclassified 708
214 Ga0501276_011539 3300049773 Unclassified 755
215 Ga0501279_004812 3300049775 Unclassified 1774
216 Ga0501212_004785 3300049851 Unclassified 1764
217 nmdc:mga09592_847507_c1 3300050508 Bacteria 771
218 nmdc:mga08y16_417973_c1 3300050511 Bacteria 1371
219 Ga0500578_0445368 3300053086 Bacteria 738
220 Ga0500646_0196353 3300053090 Bacteria 690
221 Ga0500651_0000934 3300053093 Bacteria 14333
222 Ga0500556_0020297 3300053104 Bacteria 2125
223 Ga0500594_0002787 3300053118 Unclassified 3806
224 Ga0500658_0066329 3300053134 Bacteria 1514
225 Ga0500561_0078669 3300053137 Bacteria 957
226 Ga0500568_0237023 3300053139 Bacteria 665
227 Ga0500616_0014019 3300053153 Unclassified 4622
228 Ga0500616_0031264 3300053153 Bacteria 2917
229 Ga0500633_0000800 3300053160 Bacteria 5378
230 Ga0500587_007931 3300053739 Bacteria 1372
231 Ga0530510_0534367 3300061734 Bacteria 890
232 2722730353 2721755487 Bacteria 6357185
233 2739300353 2738543023 Bacteria 6767879
234 2776612649 2775506987 Bacteria 5373360
235 2896114962 2896109856 Bacteria 7140722
236 Ga0268264_10910653
237 SwRhRL2b_contig_1567641
238 SwRhRL2b_contig_2942017
239 SwRhRL2b_contig_676118
240 MBSR1b_contig_795359
241 JGI25158J39367_1011891
242 rootH1_10037176
243 rootH1_10108694
244 rootH2_10184735
245 rootH2_10184985
246 rootH2_10186938
247 rootH2_10252069
248 rootL2_10142269
249 rootL2_10346340
250 rootL2_10350049
251 rootH1_10025354
252 rootH1_10164354
253 rootH1_10208800
254 Ga0055536_1000036
255 Ga0055530_10000851
256 Ga0055531_10000066
257 Ga0055531_10000128
258 Ga0065714_10078062
259 Ga0065704_10070136
260 Ga0065704_10092042
261 Ga0065704_10186642
262 Ga0065704_10384833
263 Ga0065715_10328624
264 Ga0065707_10304655
265 Ga0070658_10757515
266 Ga0070676_10170120
267 Ga0070690_100503797
268 Ga0070670_100133715
269 Ga0070670_100360506
270 Ga0070670_100452276
271 Ga0068869_100021412
272 Ga0070680_100001415
273 Ga0070680_100747193
274 Ga0070660_100022871
275 Ga0070689_100288045
276 Ga0070668_100024075
277 Ga0070675_100007506
278 Ga0070673_100169674
279 Ga0070673_100643205
280 Ga0070688_100020099
281 Ga0070688_100204281
282 Ga0070667_100454660
283 Ga0070709_10740981
284 Ga0070700_100037439
285 Ga0070694_100585239
286 Ga0070662_100019415
287 Ga0070681_10080925
288 Ga0068867_100499898
289 Ga0070679_100006325
290 Ga0070679_100401317
291 Ga0070684_100045625
292 Ga0070684_100458978
293 Ga0070672_100383933
294 Ga0070686_100111936
295 Ga0070686_100488566
296 Ga0070665_100957866
297 Ga0070665_101358155
298 Ga0068855_100133820
299 Ga0068859_100174042
300 Ga0068859_100930302
301 Ga0068864_100071624
302 Ga0068861_100025664
303 Ga0068870_10094678
304 Ga0068863_100626027
305 Ga0068863_101415377
306 Ga0068862_100142054
307 Ga0070716_100041944
308 Ga0075366_10308324
309 Ga0097621_100780810
310 Ga0068871_100237854
311 Ga0068871_100306714
312 Ga0068865_101348009
313 Ga0097620_100174044
314 Ga0097620_100930206
315 Ga0105240_10000071
316 Ga0105240_10001541
317 Ga0105240_11834111
318 Ga0105247_10819095
319 Ga0105241_10203953
320 Ga0105241_10283679
321 Ga0105237_10005058
322 Ga0105237_10014233
323 Ga0105238_10187933
324 Ga0105249_10006720
325 Ga0105239_10000662
326 Ga0157371_10040466
327 Ga0157371_10051177
328 Ga0157370_10178086
329 Ga0157370_10247155
330 Ga0157370_10275899
331 Ga0157370_10462613
332 Ga0157369_10074132
333 Ga0157369_10587958
334 Ga0157374_10310354
335 Ga0163162_10989314
336 Ga0157372_10058251
337 Ga0157372_10121250
338 Ga0157372_10288165
339 Ga0157372_10735249
340 Ga0157380_10124666
341 Ga0157380_11009517
342 Ga0157377_10903274
343 Ga0157376_10111950
344 Ga0209676_1000008
345 Ga0209050_1000180
346 Ga0209257_1000005
347 Ga0209257_1000025
348 Ga0207697_10025052
349 Ga0207645_10785255
350 Ga0207643_10413640
351 Ga0207695_10003159
352 Ga0207671_10036244
353 Ga0207657_10014423
354 Ga0207657_10221647
355 Ga0207652_10000168
356 Ga0207652_10356649
357 Ga0207652_11080444
358 Ga0207681_10036329
359 Ga0207694_10292646
360 Ga0207650_10394951
361 Ga0207659_10118838
362 Ga0207690_10795725
363 Ga0207706_10050569
364 Ga0207689_10055779
365 Ga0207667_10689991
366 Ga0207712_10167494
367 Ga0207668_10299082
368 Ga0207668_11155380
369 Ga0207708_10189605
370 Ga0207641_10334075
371 Ga0207648_10322442
372 Ga0207676_10099115
373 Ga0207674_10017212
374 Ga0207674_10257492
375 Ga0207675_100016538
376 Ga0307515_10000007
377 Ga0265760_10005466
378 Ga0265327_10000026
379 Ga0307509_10020778
380 Ga0307408_100447295
381 Ga0307514_10369060
382 Ga0307405_10024780
383 Ga0307405_10335019
384 Ga0307407_10091657
385 Ga0307409_100005651
386 Ga0307416_100008473
387 Ga0307416_100068788
388 Ga0307416_101228771
389 Ga0307415_100019366
390 Ga0316212_1039499
391 Ga0373927_0010682
392 Ga0373937_1475890
393 Ga0316582_0492494
394 Ga0395899_0000806
395 Ga0395899_0006304
396 Ga0395899_0011015
397 Ga0395900_0001707
398 Ga0395900_0021120
399 Ga0395900_0062550
400 Ga0395898_0000688
401 Ga0395898_0144456
402 Ga0395898_0324710
403 Ga0395905_0101294
404 Ga0395901_0001896
405 Ga0395901_0013137
406 Ga0451791_0207179
407 Ga0451802_1671588
408 Ga0451837_1173622
409 Ga0439431_0040395
410 Ga0439431_0135687
411 Ga0439433_0090885
412 Ga0439445_0021731
413 Ga0439462_0037892
414 Ga0450898_000916
415 Ga0439434_0004892
416 Ga0451577_0033640
417 Ga0453683_0000679
418 Ga0466961_0007137
419 Ga0466963_0419050
420 Ga0453684_0005662
421 Ga0453684_0042651
422 Ga0451576_0006538
423 Ga0495638_0370210
424 Ga0495605_0036869
425 Ga0495606_0002426
426 Ga0495608_0414137
427 Ga0495630_0323069
428 Ga0495625_0000923
429 Ga0495661_0003703
430 Ga0495661_0014166
431 Ga0495672_0020042
432 Ga0495680_0661667
433 Ga0495686_0007422
434 Ga0495686_0067023
435 Ga0496112_0470663
436 Ga0496115_1140537
437 Ga0496116_0004698
438 Ga0501290_027795
439 Ga0501199_010374
440 Ga0501202_006062
441 Ga0501223_013151
442 Ga0501227_131092
443 Ga0501235_008370
444 Ga0501225_0005475
445 Ga0501083_0000173
446 Ga0501268_010588
447 Ga0501274_006407
448 Ga0501274_018370
449 Ga0501276_011539
450 Ga0501279_004812
451 Ga0501212_004785
452 nmdc:mga09592_847507_c1
453 nmdc:mga08y16_417973_c1
454 Ga0500578_0445368
455 Ga0500646_0196353
456 Ga0500651_0000934
457 Ga0500556_0020297
458 Ga0500594_0002787
459 Ga0500658_0066329
460 Ga0500561_0078669
461 Ga0500568_0237023
462 Ga0500616_0014019
463 Ga0500616_0031264
464 Ga0500633_0000800
465 Ga0500587_007931
466 Ga0530510_0534367
467 2722730353
468 2739300353
469 2776612649
470 2896114962

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

29

193

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gd9-assembly1.cif.gz_B crystal structure of a putative dihydrofolate reductase (bsu40760, yyap) from bacillus subtilis at 2.30 a resolution 0.8779 2 175
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8578 1 175
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8566 1 175
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.845 1 175
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8431 1 175
ID Description Score Start End Superfamily
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8784 2 174 3.40.430.10
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8731 2 174 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.851 1 175 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8369 1 175 3.40.430.10
1cz3B00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8342 3 178 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A2T7BJZ7-F1-model_v4 Dihydrofolate reductase 0.9718 1 178 GO:0008703
GO:0009231
AF-A0A537ID20-F1-model_v4 Dihydrofolate reductase 0.9578 1 178 GO:0008703
GO:0009231
AF-A0A2T7BJZ7-F1-model_v4 Dihydrofolate reductase 0.9558 1 178 GO:0008703
GO:0009231
AF-A0A3S0E3V0-F1-model_v4 Dihydrofolate reductase 0.9526 1 178 GO:0008703
GO:0009231
AF-A0A3S0E3V0-F1-model_v4 Dihydrofolate reductase 0.9472 1 178 GO:0008703
GO:0009231

Map