F348271

General Info

Members Datasets Scaffolds Average Seq Length
235 158 470 296

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100004677|Ga0307408_1000046772
Length 348
Sequence MTRLRPNSMSPLTSFAKSGPPASRRTPRRTSGGSHQTERARNQTRAIRLRCVRGIILAGGSGTRLHPVTLGVSKQLVPVYDKPMIYYPLSTLIFAGIRDVLVITTPHDASAFERLLGDGSQFGISIHYAVQPSPDGLAQAFVIGADFIGLEKVALVLGDNIFYGPGLGTQLGRFSDVDGGAVFAYWVAEPQAYGVVEFDVDGRAISLEEKPARPRSNYAVPGLYFYDNDVIGIASQLQPSARGEYEITDVNRHYLEAGRLQVGVLPRGTAWLDTGTFESMNDASNFVRTIEARQGLKVGAPEEAAWRQGFLSDEELEQRAHALLKSGYGTYLADILQRRRQSAVSLAG

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300012495 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610 Metagenome Rhizosphere
59 3300012510 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610 Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
100 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
105 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
114 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
115 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
116 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
117 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
124 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
129 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
130 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
131 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
132 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
146 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
147 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
148 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
149 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
150 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
151 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
152 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
153 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
154 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
155 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
156 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
157 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
158 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 96.17
Metatranscriptomes 0
Isolates 3.83

Biome Distribution

Category Percentage (%)
Aerial Root 0.85
Bulb 0
Endosphere 11.91
Nodule 0
Rhizoplane 0
Rhizosphere 83.83
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100004677 3300031548 Bacteria 9245
2 rootH1_10170001 3300003323 Bacteria 2118
3 Ga0070658_10024048 3300005327 Bacteria 4889
4 Ga0070658_10121172 3300005327 Bacteria 2173
5 Ga0070676_10327301 3300005328 Bacteria 1047
6 Ga0070690_100002458 3300005330 Bacteria 9960
7 Ga0070670_100024591 3300005331 Bacteria 5179
8 Ga0068869_100001174 3300005334 Bacteria 15365
9 Ga0070666_10071063 3300005335 Bacteria 2368
10 Ga0070680_100083202 3300005336 Bacteria 2642
11 Ga0070668_100028226 3300005347 Bacteria 4261
12 Ga0070675_100062125 3300005354 Bacteria 3086
13 Ga0070674_100361506 3300005356 Bacteria 1175
14 Ga0070659_100049406 3300005366 Bacteria 3307
15 Ga0070714_100110438 3300005435 Bacteria 2434
16 Ga0070700_100026065 3300005441 Bacteria 3448
17 Ga0070700_100036965 3300005441 Bacteria 2966
18 Ga0070662_100333230 3300005457 Bacteria 1240
19 Ga0068867_100000301 3300005459 Bacteria 32487
20 Ga0068867_100003279 3300005459 Bacteria 11404
21 Ga0068853_100085315 3300005539 Bacteria 2768
22 Ga0068855_100010402 3300005563 Bacteria 11223
23 Ga0068852_100045858 3300005616 Bacteria 3721
24 Ga0068859_100182143 3300005617 Bacteria 2184
25 Ga0068866_10027308 3300005718 Bacteria 2705
26 Ga0068870_10115735 3300005840 Bacteria 1537
27 Ga0068863_100459752 3300005841 Bacteria 1250
28 Ga0068858_100000048 3300005842 Bacteria 126360
29 Ga0068860_100030440 3300005843 Bacteria 5192
30 Ga0068860_100144524 3300005843 Bacteria 2288
31 Ga0068862_100046266 3300005844 Bacteria 3713
32 Ga0068862_100150709 3300005844 Bacteria 2070
33 Ga0081455_10004976 3300005937 Bacteria 14699
34 Ga0075365_10003981 3300006038 Bacteria 7739
35 Ga0075365_10105985 3300006038 Bacteria 1928
36 Ga0075365_10160635 3300006038 Bacteria 1565
37 Ga0075368_10031299 3300006042 Bacteria 2063
38 Ga0075363_100052953 3300006048 Bacteria 2167
39 Ga0075363_100081954 3300006048 Bacteria 1765
40 Ga0075364_10005222 3300006051 Bacteria 7539
41 Ga0075364_10073925 3300006051 Bacteria 2247
42 Ga0075364_10137474 3300006051 Bacteria 1642
43 Ga0075432_10000140 3300006058 Bacteria 16909
44 Ga0075432_10009097 3300006058 Bacteria 3384
45 Ga0075362_10014446 3300006177 Bacteria 3188
46 Ga0075362_10134341 3300006177 Bacteria 1179
47 Ga0075367_10047716 3300006178 Bacteria 2520
48 Ga0075367_10118572 3300006178 Bacteria 1629
49 Ga0075369_10088523 3300006186 Bacteria 1380
50 Ga0097621_100011855 3300006237 Bacteria 6443
51 Ga0097621_100521170 3300006237 Bacteria 1079
52 Ga0068871_100022864 3300006358 Bacteria 4826
53 Ga0075428_100000711 3300006844 Bacteria 34391
54 Ga0075428_100205232 3300006844 Bacteria 2130
55 Ga0075428_100476293 3300006844 Bacteria 1336
56 Ga0075431_100004840 3300006847 Bacteria 13257
57 Ga0075433_10000003 3300006852 Bacteria 85999
58 Ga0075433_10002175 3300006852 Bacteria 14856
59 Ga0075434_100001046 3300006871 Bacteria 22564
60 Ga0075434_100023919 3300006871 Bacteria 5963
61 Ga0075429_100056370 3300006880 Bacteria 3420
62 Ga0068865_100001675 3300006881 Bacteria 12976
63 Ga0068865_100017042 3300006881 Bacteria 4663
64 Ga0068865_100042152 3300006881 Bacteria 3111
65 Ga0075436_100000498 3300006914 Bacteria 25418
66 Ga0097620_100182146 3300006931 Bacteria 2184
67 Ga0075435_100000333 3300007076 Bacteria 29085
68 Ga0075435_100003509 3300007076 Bacteria 10647
69 Ga0111539_10001429 3300009094 Bacteria 31852
70 Ga0111539_10002214 3300009094 Bacteria 25972
71 Ga0105245_10023612 3300009098 Bacteria 5399
72 Ga0105245_10097321 3300009098 Bacteria 2717
73 Ga0114129_10000805 3300009147 Bacteria 40272
74 Ga0105243_10032630 3300009148 Bacteria 4025
75 Ga0105243_10133488 3300009148 Bacteria 2109
76 Ga0105243_10793691 3300009148 Bacteria 932
77 Ga0105242_10018818 3300009176 Bacteria 5406
78 Ga0105237_10237795 3300009545 Bacteria 1823
79 Ga0105238_10102166 3300009551 Bacteria 2849
80 Ga0105249_10076932 3300009553 Bacteria 3094
81 Ga0105028_104836 3300009993 Bacteria 1405
82 Ga0105239_10044460 3300010375 Bacteria 4868
83 Ga0105239_10082290 3300010375 Bacteria 3544
84 Ga0105239_10313954 3300010375 Bacteria 1767
85 Ga0157323_1000980 3300012495 Bacteria 1340
86 Ga0157316_1001593 3300012510 Bacteria 1434
87 Ga0157378_10064603 3300013297 Bacteria 3274
88 Ga0157378_10072651 3300013297 Bacteria 3091
89 Ga0157372_10248247 3300013307 Bacteria 2066
90 Ga0157379_10517528 3300014968 Bacteria 1107
91 Ga0182005_1000124 3300015265 Bacteria 54958
92 Ga0163161_10010786 3300017792 Bacteria 6332
93 Ga0163161_10065655 3300017792 Bacteria 2648
94 Ga0209436_106648 3300025208 Bacteria 2509
95 Ga0207426_1002733 3300025302 Bacteria 10706
96 Ga0207642_10029256 3300025899 Bacteria 2279
97 Ga0207642_10125346 3300025899 Bacteria 1332
98 Ga0207688_10009385 3300025901 Bacteria 5328
99 Ga0207643_10136156 3300025908 Bacteria 1464
100 Ga0207705_10002789 3300025909 Bacteria 13361
101 Ga0207705_10030663 3300025909 Bacteria 3837
102 Ga0207650_10006027 3300025925 Bacteria 8271
103 Ga0207659_10203536 3300025926 Bacteria 1582
104 Ga0207687_10047141 3300025927 Bacteria 2986
105 Ga0207664_10109210 3300025929 Bacteria 2298
106 Ga0207690_10029491 3300025932 Bacteria 3490
107 Ga0207690_10149010 3300025932 Bacteria 1733
108 Ga0207706_10004999 3300025933 Bacteria 12385
109 Ga0207686_10026671 3300025934 Bacteria 3374
110 Ga0207709_10004862 3300025935 Bacteria 7686
111 Ga0207704_10002651 3300025938 Bacteria 8079
112 Ga0207689_10000039 3300025942 Bacteria 93515
113 Ga0207689_10034052 3300025942 Bacteria 4230
114 Ga0207667_10096177 3300025949 Bacteria 3056
115 Ga0207712_10112985 3300025961 Bacteria 2041
116 Ga0207668_10024073 3300025972 Bacteria 3925
117 Ga0207668_10024433 3300025972 Bacteria 3900
118 Ga0207640_10282341 3300025981 Bacteria 1305
119 Ga0207703_10000064 3300026035 Bacteria 126619
120 Ga0207708_10061871 3300026075 Bacteria 2859
121 Ga0207641_10174657 3300026088 Bacteria 1964
122 Ga0207648_10002400 3300026089 Bacteria 20173
123 Ga0207648_10002565 3300026089 Bacteria 19471
124 Ga0207674_10027482 3300026116 Bacteria 6017
125 Ga0207675_100001708 3300026118 Bacteria 22005
126 Ga0207683_10229234 3300026121 Bacteria 1694
127 Ga0207428_10004740 3300027907 Bacteria 12863
128 Ga0207428_10009107 3300027907 Bacteria 8923
129 Ga0207428_10017071 3300027907 Bacteria 6236
130 Ga0268265_10082890 3300028380 Bacteria 2537
131 Ga0268264_10020201 3300028381 Bacteria 5444
132 Ga0265327_10000063 3300031251 Bacteria 232763
133 Ga0265327_10001497 3300031251 Bacteria 28976
134 Ga0307408_100000011 3300031548 Bacteria 414737
135 Ga0307408_100029206 3300031548 Bacteria 3817
136 Ga0307408_100090356 3300031548 Bacteria 2311
137 Ga0307408_100176003 3300031548 Bacteria 1712
138 Ga0307408_100194781 3300031548 Bacteria 1636
139 Ga0307408_100336139 3300031548 Bacteria 1277
140 Ga0265314_10043784 3300031711 Bacteria 3178
141 Ga0316576_10060998 3300031727 Bacteria 2764
142 Ga0307405_10001207 3300031731 Bacteria 10724
143 Ga0307413_10005495 3300031824 Bacteria 5663
144 Ga0307413_10256158 3300031824 Bacteria 1301
145 Ga0307410_10001716 3300031852 Bacteria 10111
146 Ga0307410_10006728 3300031852 Bacteria 6231
147 Ga0307410_10063312 3300031852 Bacteria 2536
148 Ga0307410_10331893 3300031852 Bacteria 1210
149 Ga0307410_10372418 3300031852 Bacteria 1147
150 Ga0307406_10000718 3300031901 Bacteria 18684
151 Ga0307406_10023358 3300031901 Bacteria 3677
152 Ga0307406_10037769 3300031901 Bacteria 2985
153 Ga0307407_10000774 3300031903 Bacteria 10539
154 Ga0307412_10005719 3300031911 Bacteria 6990
155 Ga0307412_10009983 3300031911 Bacteria 5461
156 Ga0307412_10056731 3300031911 Bacteria 2612
157 Ga0307409_100000040 3300031995 Bacteria 44978
158 Ga0307409_100004823 3300031995 Bacteria 7656
159 Ga0307416_100000035 3300032002 Bacteria 144188
160 Ga0307416_100000078 3300032002 Bacteria 71548
161 Ga0307416_100160617 3300032002 Bacteria 2076
162 Ga0307416_100272727 3300032002 Bacteria 1662
163 Ga0307414_10000285 3300032004 Bacteria 29693
164 Ga0307414_10096454 3300032004 Bacteria 2213
165 Ga0307414_10105175 3300032004 Bacteria 2133
166 Ga0307411_10007839 3300032005 Bacteria 5481
167 Ga0307411_10090940 3300032005 Bacteria 2130
168 Ga0307411_10129358 3300032005 Bacteria 1843
169 Ga0307411_10149533 3300032005 Bacteria 1733
170 Ga0307415_100028126 3300032126 Bacteria 3572
171 Ga0307415_100190825 3300032126 Bacteria 1617
172 Ga0316574_0061873 3300035398 Bacteria 2352
173 Ga0373931_0167567 3300035691 Bacteria 1292
174 Ga0316584_0086534 3300036712 Bacteria 2346
175 Ga0395905_0000026 3300037471 Bacteria 315051
176 Ga0436364_0633294 3300037853 Bacteria 5936
177 Ga0439448_0014700 3300042005 Bacteria 2363
178 Ga0439432_050520 3300042006 Bacteria 1298
179 Ga0439434_0030404 3300042435 Bacteria 1639
180 Ga0439435_0008182 3300042436 Bacteria 2420
181 Ga0451577_0000035 3300042876 Bacteria 373467
182 Ga0453683_0000002 3300044673 Bacteria 1244396
183 Ga0453683_0000622 3300044673 Bacteria 38622
184 Ga0453683_0000926 3300044673 Bacteria 27966
185 Ga0453684_0000097 3300044712 Bacteria 377772
186 Ga0453684_0108013 3300044712 Bacteria 3387
187 Ga0466959_0013683 3300045049 Bacteria 5888
188 Ga0451576_0025963 3300045051 Bacteria 6305
189 Ga0451576_0038620 3300045051 Bacteria 5053
190 Ga0495642_0104013 3300046528 Bacteria 1211
191 Ga0495611_0079897 3300046648 Bacteria 1503
192 Ga0495672_0014184 3300047320 Bacteria 5467
193 Ga0496121_0000008 3300048924 Bacteria 843593
194 Ga0501033_0284898 3300049570 Bacteria 1166
195 Ga0501069_0023548 3300049585 Bacteria 3359
196 Ga0501223_008459 3300049663 Bacteria 2099
197 Ga0501227_000198 3300049665 Bacteria 12037
198 Ga0501259_010524 3300049688 Bacteria 1512
199 Ga0501271_006952 3300049768 Bacteria 1132
200 Ga0501044_0270474 3300049823 Bacteria 1635
201 nmdc:mga03683_8002_c1 3300050489 Bacteria 3697
202 nmdc:mga00v17_1938_c1 3300050491 Bacteria 10695
203 nmdc:mga00v17_8959_c1 3300050491 Bacteria 5399
204 nmdc:mga0yw44_111164_c1 3300050492 Bacteria 1756
205 nmdc:mga0yw44_136260_c1 3300050492 Bacteria 1106
206 nmdc:mga0yw44_7851_c1 3300050492 Bacteria 5282
207 nmdc:mga0yw44_87588_c1 3300050492 Bacteria 1963
208 nmdc:mga05p37_16809_c1 3300050507 Bacteria 8821
209 nmdc:mga09592_48526_c1 3300050508 Bacteria 3579
210 nmdc:mga06r32_7714_c1 3300050510 Bacteria 9680
211 nmdc:mga08y16_183066_c1 3300050511 Bacteria 2175
212 nmdc:mga08y16_55715_c1 3300050511 Bacteria 4131
213 nmdc:mga08y16_71526_c1 3300050511 Bacteria 3615
214 nmdc:mga0n895_1054_c1 3300050512 Bacteria 20094
215 nmdc:mga0n895_14501_c1 3300050512 Bacteria 7161
216 nmdc:mga0rr50_2025_c1 3300050513 Bacteria 11292
217 nmdc:mga0rr50_30516_c1 3300050513 Bacteria 3818
218 nmdc:mga08x19_5913_c1 3300050514 Bacteria 7235
219 nmdc:mga08x19_80696_c1 3300050514 Bacteria 2135
220 nmdc:mga0a205_1500_c1 3300050515 Bacteria 19905
221 nmdc:mga0a205_322_c1 3300050515 Bacteria 35818
222 nmdc:mga0sz30_47896_c2 3300050516 Bacteria 1276
223 Ga0500593_000147 3300053117 Bacteria 28060
224 Ga0500652_000274 3300053131 Bacteria 19163
225 Ga0500573_0000001 3300053140 Bacteria 436394
226 Ga0500645_000070 3300053730 Bacteria 79917
227 2738704679 2738541274 Bacteria 6909446
228 2819576671 2818991442 Bacteria 8318214
229 2821143102 2821136567 Bacteria 8080116
230 2837269312 2837268691 Bacteria 7850704
231 2884797346 2884791551 Bacteria 8511252
232 2904470822 2904467357 Bacteria 8057758
233 2935412289 2935409751 Bacteria 4179611
234 2984577517 2984576629 Bacteria 4248407
235 2990259678 2990256926 Bacteria 4252839
236 Ga0307408_100004677
237 rootH1_10170001
238 Ga0070658_10024048
239 Ga0070658_10121172
240 Ga0070676_10327301
241 Ga0070690_100002458
242 Ga0070670_100024591
243 Ga0068869_100001174
244 Ga0070666_10071063
245 Ga0070680_100083202
246 Ga0070668_100028226
247 Ga0070675_100062125
248 Ga0070674_100361506
249 Ga0070659_100049406
250 Ga0070714_100110438
251 Ga0070700_100026065
252 Ga0070700_100036965
253 Ga0070662_100333230
254 Ga0068867_100000301
255 Ga0068867_100003279
256 Ga0068853_100085315
257 Ga0068855_100010402
258 Ga0068852_100045858
259 Ga0068859_100182143
260 Ga0068866_10027308
261 Ga0068870_10115735
262 Ga0068863_100459752
263 Ga0068858_100000048
264 Ga0068860_100030440
265 Ga0068860_100144524
266 Ga0068862_100046266
267 Ga0068862_100150709
268 Ga0081455_10004976
269 Ga0075365_10003981
270 Ga0075365_10105985
271 Ga0075365_10160635
272 Ga0075368_10031299
273 Ga0075363_100052953
274 Ga0075363_100081954
275 Ga0075364_10005222
276 Ga0075364_10073925
277 Ga0075364_10137474
278 Ga0075432_10000140
279 Ga0075432_10009097
280 Ga0075362_10014446
281 Ga0075362_10134341
282 Ga0075367_10047716
283 Ga0075367_10118572
284 Ga0075369_10088523
285 Ga0097621_100011855
286 Ga0097621_100521170
287 Ga0068871_100022864
288 Ga0075428_100000711
289 Ga0075428_100205232
290 Ga0075428_100476293
291 Ga0075431_100004840
292 Ga0075433_10000003
293 Ga0075433_10002175
294 Ga0075434_100001046
295 Ga0075434_100023919
296 Ga0075429_100056370
297 Ga0068865_100001675
298 Ga0068865_100017042
299 Ga0068865_100042152
300 Ga0075436_100000498
301 Ga0097620_100182146
302 Ga0075435_100000333
303 Ga0075435_100003509
304 Ga0111539_10001429
305 Ga0111539_10002214
306 Ga0105245_10023612
307 Ga0105245_10097321
308 Ga0114129_10000805
309 Ga0105243_10032630
310 Ga0105243_10133488
311 Ga0105243_10793691
312 Ga0105242_10018818
313 Ga0105237_10237795
314 Ga0105238_10102166
315 Ga0105249_10076932
316 Ga0105028_104836
317 Ga0105239_10044460
318 Ga0105239_10082290
319 Ga0105239_10313954
320 Ga0157323_1000980
321 Ga0157316_1001593
322 Ga0157378_10064603
323 Ga0157378_10072651
324 Ga0157372_10248247
325 Ga0157379_10517528
326 Ga0182005_1000124
327 Ga0163161_10010786
328 Ga0163161_10065655
329 Ga0209436_106648
330 Ga0207426_1002733
331 Ga0207642_10029256
332 Ga0207642_10125346
333 Ga0207688_10009385
334 Ga0207643_10136156
335 Ga0207705_10002789
336 Ga0207705_10030663
337 Ga0207650_10006027
338 Ga0207659_10203536
339 Ga0207687_10047141
340 Ga0207664_10109210
341 Ga0207690_10029491
342 Ga0207690_10149010
343 Ga0207706_10004999
344 Ga0207686_10026671
345 Ga0207709_10004862
346 Ga0207704_10002651
347 Ga0207689_10000039
348 Ga0207689_10034052
349 Ga0207667_10096177
350 Ga0207712_10112985
351 Ga0207668_10024073
352 Ga0207668_10024433
353 Ga0207640_10282341
354 Ga0207703_10000064
355 Ga0207708_10061871
356 Ga0207641_10174657
357 Ga0207648_10002400
358 Ga0207648_10002565
359 Ga0207674_10027482
360 Ga0207675_100001708
361 Ga0207683_10229234
362 Ga0207428_10004740
363 Ga0207428_10009107
364 Ga0207428_10017071
365 Ga0268265_10082890
366 Ga0268264_10020201
367 Ga0265327_10000063
368 Ga0265327_10001497
369 Ga0307408_100000011
370 Ga0307408_100029206
371 Ga0307408_100090356
372 Ga0307408_100176003
373 Ga0307408_100194781
374 Ga0307408_100336139
375 Ga0265314_10043784
376 Ga0316576_10060998
377 Ga0307405_10001207
378 Ga0307413_10005495
379 Ga0307413_10256158
380 Ga0307410_10001716
381 Ga0307410_10006728
382 Ga0307410_10063312
383 Ga0307410_10331893
384 Ga0307410_10372418
385 Ga0307406_10000718
386 Ga0307406_10023358
387 Ga0307406_10037769
388 Ga0307407_10000774
389 Ga0307412_10005719
390 Ga0307412_10009983
391 Ga0307412_10056731
392 Ga0307409_100000040
393 Ga0307409_100004823
394 Ga0307416_100000035
395 Ga0307416_100000078
396 Ga0307416_100160617
397 Ga0307416_100272727
398 Ga0307414_10000285
399 Ga0307414_10096454
400 Ga0307414_10105175
401 Ga0307411_10007839
402 Ga0307411_10090940
403 Ga0307411_10129358
404 Ga0307411_10149533
405 Ga0307415_100028126
406 Ga0307415_100190825
407 Ga0316574_0061873
408 Ga0373931_0167567
409 Ga0316584_0086534
410 Ga0395905_0000026
411 Ga0436364_0633294
412 Ga0439448_0014700
413 Ga0439432_050520
414 Ga0439434_0030404
415 Ga0439435_0008182
416 Ga0451577_0000035
417 Ga0453683_0000002
418 Ga0453683_0000622
419 Ga0453683_0000926
420 Ga0453684_0000097
421 Ga0453684_0108013
422 Ga0466959_0013683
423 Ga0451576_0025963
424 Ga0451576_0038620
425 Ga0495642_0104013
426 Ga0495611_0079897
427 Ga0495672_0014184
428 Ga0496121_0000008
429 Ga0501033_0284898
430 Ga0501069_0023548
431 Ga0501223_008459
432 Ga0501227_000198
433 Ga0501259_010524
434 Ga0501271_006952
435 Ga0501044_0270474
436 nmdc:mga03683_8002_c1
437 nmdc:mga00v17_1938_c1
438 nmdc:mga00v17_8959_c1
439 nmdc:mga0yw44_111164_c1
440 nmdc:mga0yw44_136260_c1
441 nmdc:mga0yw44_7851_c1
442 nmdc:mga0yw44_87588_c1
443 nmdc:mga05p37_16809_c1
444 nmdc:mga09592_48526_c1
445 nmdc:mga06r32_7714_c1
446 nmdc:mga08y16_183066_c1
447 nmdc:mga08y16_55715_c1
448 nmdc:mga08y16_71526_c1
449 nmdc:mga0n895_1054_c1
450 nmdc:mga0n895_14501_c1
451 nmdc:mga0rr50_2025_c1
452 nmdc:mga0rr50_30516_c1
453 nmdc:mga08x19_5913_c1
454 nmdc:mga08x19_80696_c1
455 nmdc:mga0a205_1500_c1
456 nmdc:mga0a205_322_c1
457 nmdc:mga0sz30_47896_c2
458 Ga0500593_000147
459 Ga0500652_000274
460 Ga0500573_0000001
461 Ga0500645_000070
462 2738704679
463 2819576671
464 2821143102
465 2837269312
466 2884797346
467 2904470822
468 2935412289
469 2984577517
470 2990259678

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00483

NTP_transferase

Nucleotidyl transferase

53

290

0.98

PF12804

NTP_transf_3

MobA-like NTP transferase domain

54

207

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3pkq-assembly3.cif.gz_C q83d variant of s. enterica rmla with dgtp 0.979 1 286
3pkq-assembly3.cif.gz_D q83d variant of s. enterica rmla with dgtp 0.979 1 286
1lvw-assembly1.cif.gz_B crystal structure of glucose-1-phosphate thymidylyltransferase, rmla, complex with dtdp 0.9788 1 285
3pkp-assembly1.cif.gz_A q83s variant of s. enterica rmla with datp 0.9779 2 286
5ids-assembly1.cif.gz_B crystal structure of a glucose-1-phosphate thymidylyltransferase from burkholderia vietnamiensis 0.9771 2 286
ID Description Score Start End Superfamily
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9614 2 285 3.90.550.10
4b2xA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9516 2 285 3.90.550.10
4ecmA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9196 1 237 3.90.550.10
af_Q58501_1_209_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9095 1 222 3.90.550.10
5z0aE01 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9002 1 222 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A6I0DZI6-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9995 1 106 GO:0008879
GO:0045226
AF-A0A846Q3P9-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9985 1 98 GO:0008879
GO:0045226
AF-A0A351VA12-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9984 1 112 GO:0008879
GO:0045226
AF-A0A6I3TEG1-F1-model_v4 deleted 0.9979 14 122
AF-A0A3D6A514-F1-model_v4 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.9974 2 98 GO:0008879
GO:0045226

Map