F348375

General Info

Members Datasets Scaffolds Average Seq Length
235 164 235 183

Family's Representative Sequence

Representative Sequence 3300044658|Ga0466972_0025912|Ga0466972_0025912_1306_1959
Length 217
Sequence LHFFYKLLTIDEAATLPGFNSVSSAKLNRTLMTNTFKVTIHMVSSLDGIIAKKDNSVSWFETADHYEKGIDVSGQDIAEFLKTIDCYVMGARTYEHALELSKSYGWAYGDIPTIVVTHRNLPVERENIEIYSGDLGILVNERLRPKYKNVWLVGGAMLAKDFICLQLADEIRLSILPIILGDGMLFFDHIGQEQALHLKDVTAYKSGMVEMCYEIKR

Samples

Sample ID Description Type Environment
1 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
74 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
75 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
118 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
121 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
122 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
125 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
126 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
127 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
128 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
129 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
130 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
131 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
132 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
133 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
134 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
139 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
146 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
155 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
156 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
163 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
164 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.06
Nodule 0
Rhizoplane 2.55
Rhizosphere 78.3
Stem 0
Stem Tuber 0
Unclassified 8.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 ARSoilOldRDRAFT_c003215 3300000044 Bacteria 1412
2 JGI25162J39368_1001507 3300002737 Bacteria 12120
3 JGI25165J46597_1000461 3300003214 Bacteria 40249
4 rootH1_10101844 3300003316 Bacteria 7228
5 rootH1_10101844 3300003323 Bacteria 1507
6 rootH1_10173022 3300003316 Bacteria 2538
7 rootH2_10118260 3300003320 Bacteria 3188
8 rootH2_10196011 3300003320 Bacteria 1112
9 JGI25160J50197_1000938 3300003354 Bacteria 15331
10 JGI25160J50197_1004868 3300003354 Bacteria 5717
11 Ga0055530_10000556 3300003791 Bacteria 32375
12 Ga0055531_10018097 3300003794 Unclassified 2931
13 Ga0065165_1020583 3300005262 Bacteria 2317
14 Ga0065712_10077130 3300005290 Unclassified 3544
15 Ga0065715_10199501 3300005293 Bacteria 1369
16 Ga0070676_10035368 3300005328 Bacteria 2872
17 Ga0070670_100037260 3300005331 Bacteria 4184
18 Ga0070670_100140416 3300005331 Unclassified 2089
19 Ga0070670_100656473 3300005331 Bacteria 941
20 Ga0068869_100825769 3300005334 Bacteria 798
21 Ga0070689_100209004 3300005340 Bacteria 1597
22 Ga0070687_100235917 3300005343 Bacteria 1128
23 Ga0070668_100088752 3300005347 Bacteria 2434
24 Ga0070669_100017522 3300005353 Bacteria 5109
25 Ga0070675_100130845 3300005354 Bacteria 2138
26 Ga0070671_100008726 3300005355 Bacteria 8133
27 Ga0070673_100157829 3300005364 Bacteria 1927
28 Ga0070673_100456996 3300005364 Unclassified 1149
29 Ga0070688_100008340 3300005365 Bacteria 5622
30 Ga0070667_100105350 3300005367 Bacteria 2440
31 Ga0070701_10180188 3300005438 Bacteria 1236
32 Ga0070694_100967993 3300005444 Bacteria 705
33 Ga0070678_100350728 3300005456 Bacteria 1269
34 Ga0070662_100265930 3300005457 Unclassified 1383
35 Ga0070681_11003933 3300005458 Bacteria 754
36 Ga0068867_101056882 3300005459 Unclassified 739
37 Ga0070685_10018201 3300005466 Unclassified 3774
38 Ga0068853_100330994 3300005539 Bacteria 1413
39 Ga0070672_100276259 3300005543 Bacteria 1419
40 Ga0070665_100000013 3300005548 Bacteria 484927
41 Ga0070665_100590164 3300005548 Bacteria 1124
42 Ga0070664_100621183 3300005564 Bacteria 1003
43 Ga0068857_100577411 3300005577 Bacteria 1061
44 Ga0068854_100109121 3300005578 Bacteria 2085
45 Ga0068854_100138781 3300005578 Bacteria 1863
46 Ga0068856_100286823 3300005614 Bacteria 1663
47 Ga0068852_101196436 3300005616 Bacteria 781
48 Ga0068859_100055823 3300005617 Unclassified 3974
49 Ga0068859_100129315 3300005617 Bacteria 2596
50 Ga0068864_100022323 3300005618 Bacteria 5306
51 Ga0068864_100543188 3300005618 Unclassified 1122
52 Ga0068861_100001014 3300005719 Bacteria 17170
53 Ga0068851_10327866 3300005834 Unclassified 886
54 Ga0068863_100058909 3300005841 Unclassified 3634
55 Ga0068860_100048714 3300005843 Bacteria 4038
56 Ga0068860_100207844 3300005843 Bacteria 1898
57 Ga0068862_100035050 3300005844 Bacteria 4248
58 Ga0068862_100371177 3300005844 Bacteria 1332
59 Ga0097621_100099748 3300006237 Bacteria 2441
60 Ga0097621_100216666 3300006237 Bacteria 1667
61 Ga0097621_100298206 3300006237 Bacteria 1423
62 Ga0097621_100712759 3300006237 Unclassified 924
63 Ga0068871_100013002 3300006358 Bacteria 6165
64 Ga0068871_100304939 3300006358 Bacteria 1399
65 Ga0075428_100114658 3300006844 Bacteria 2935
66 Ga0068865_100208205 3300006881 Unclassified 1522
67 Ga0097620_100055825 3300006931 Unclassified 3974
68 Ga0097620_100129311 3300006931 Bacteria 2596
69 Ga0105240_10031451 3300009093 Bacteria 6883
70 Ga0111539_10007486 3300009094 Bacteria 13979
71 Ga0111539_11056498 3300009094 Bacteria 944
72 Ga0114129_12051356 3300009147 Unclassified 691
73 Ga0105241_10298990 3300009174 Bacteria 1381
74 Ga0105241_10433214 3300009174 Bacteria 1160
75 Ga0105242_10051229 3300009176 Bacteria 3364
76 Ga0105248_10045649 3300009177 Bacteria 4913
77 Ga0105237_10250241 3300009545 Bacteria 1774
78 Ga0105238_10674349 3300009551 Bacteria 1045
79 Ga0105249_10001275 3300009553 Bacteria 22098
80 Ga0105249_10817439 3300009553 Bacteria 996
81 Ga0105239_10000749 3300010375 Bacteria 46059
82 Ga0105239_10008948 3300010375 Bacteria 11329
83 Ga0105239_10073040 3300010375 Bacteria 3772
84 Ga0105239_10172250 3300010375 Bacteria 2421
85 Ga0105239_10347766 3300010375 Bacteria 1674
86 Ga0157371_10257253 3300013102 Bacteria 1258
87 Ga0157369_10115600 3300013105 Bacteria 2849
88 Ga0157374_10020491 3300013296 Bacteria 5867
89 Ga0157374_10068880 3300013296 Bacteria 3330
90 Ga0157374_10161225 3300013296 Bacteria 2184
91 Ga0157374_10300232 3300013296 Unclassified 1589
92 Ga0157378_10002500 3300013297 Bacteria 16359
93 Ga0157378_10006167 3300013297 Bacteria 10494
94 Ga0157378_10040408 3300013297 Bacteria 4136
95 Ga0157378_10137121 3300013297 Bacteria 2269
96 Ga0163162_10003528 3300013306 Bacteria 14966
97 Ga0163162_10037235 3300013306 Bacteria 4853
98 Ga0163162_10183105 3300013306 Unclassified 2221
99 Ga0163162_10808600 3300013306 Bacteria 1054
100 Ga0157372_10051435 3300013307 Bacteria 4585
101 Ga0157372_10323882 3300013307 Bacteria 1794
102 Ga0157372_10554212 3300013307 Bacteria 1340
103 Ga0157375_10024722 3300013308 Bacteria 5565
104 Ga0157375_10045695 3300013308 Unclassified 4264
105 Ga0157375_10568274 3300013308 Unclassified 1295
106 Ga0157380_10006266 3300014326 Bacteria 8353
107 Ga0157377_10008321 3300014745 Bacteria 5055
108 Ga0157376_10002380 3300014969 Bacteria 12699
109 Ga0157376_10422856 3300014969 Unclassified 1293
110 Ga0163161_10010178 3300017792 Bacteria 6510
111 Ga0163161_10164417 3300017792 Bacteria 1694
112 Ga0207427_100277 3300025231 Bacteria 38224
113 Ga0209437_100010 3300025233 Bacteria 838447
114 Ga0209026_1017911 3300025250 Bacteria 1125
115 Ga0209233_1000017 3300025261 Bacteria 898076
116 Ga0209050_1000438 3300025298 Bacteria 76226
117 Ga0209050_1031412 3300025298 Bacteria 1655
118 Ga0207426_1000261 3300025302 Bacteria 112697
119 Ga0209051_1034565 3300025303 Unclassified 1893
120 Ga0209257_1001172 3300025304 Bacteria 33158
121 Ga0207697_10033156 3300025315 Bacteria 2114
122 Ga0207656_10076310 3300025321 Bacteria 1499
123 Ga0207656_10260952 3300025321 Unclassified 851
124 Ga0207647_10415104 3300025904 Bacteria 757
125 Ga0207645_10019165 3300025907 Bacteria 4491
126 Ga0207654_10224378 3300025911 Bacteria 1248
127 Ga0207654_10288192 3300025911 Bacteria 1112
128 Ga0207707_10852574 3300025912 Bacteria 756
129 Ga0207662_10117036 3300025918 Bacteria 1667
130 Ga0207681_10009753 3300025923 Bacteria 5874
131 Ga0207650_10049348 3300025925 Bacteria 3107
132 Ga0207650_10431857 3300025925 Bacteria 1094
133 Ga0207659_11131144 3300025926 Bacteria 673
134 Ga0207644_10030082 3300025931 Unclassified 3772
135 Ga0207644_10495628 3300025931 Unclassified 1007
136 Ga0207706_10045617 3300025933 Bacteria 3883
137 Ga0207686_10038643 3300025934 Bacteria 2890
138 Ga0207670_10178114 3300025936 Bacteria 1599
139 Ga0207711_10632501 3300025941 Bacteria 998
140 Ga0207689_10118865 3300025942 Bacteria 2174
141 Ga0207689_10691459 3300025942 Bacteria 860
142 Ga0207667_10067990 3300025949 Bacteria 3711
143 Ga0207651_10038924 3300025960 Bacteria 3130
144 Ga0207651_10083736 3300025960 Bacteria 2308
145 Ga0207712_10577418 3300025961 Bacteria 970
146 Ga0207668_10098667 3300025972 Unclassified 2165
147 Ga0207668_10868784 3300025972 Bacteria 801
148 Ga0207668_11112129 3300025972 Bacteria 708
149 Ga0207640_10222929 3300025981 Bacteria 1445
150 Ga0207640_10676691 3300025981 Bacteria 882
151 Ga0207658_10037842 3300025986 Bacteria 3471
152 Ga0207677_10005600 3300026023 Bacteria 6826
153 Ga0207703_10887553 3300026035 Bacteria 853
154 Ga0207639_10300908 3300026041 Bacteria 1418
155 Ga0207702_10064976 3300026078 Bacteria 3124
156 Ga0207641_10019573 3300026088 Bacteria 5557
157 Ga0207648_10623461 3300026089 Bacteria 995
158 Ga0207676_10005891 3300026095 Bacteria 8655
159 Ga0207676_10085461 3300026095 Unclassified 2575
160 Ga0207676_10672720 3300026095 Bacteria 1001
161 Ga0207674_10170672 3300026116 Bacteria 2129
162 Ga0207675_100139136 3300026118 Bacteria 2305
163 Ga0207683_10168340 3300026121 Bacteria 1984
164 Ga0207683_10173198 3300026121 Bacteria 1955
165 Ga0207698_10182379 3300026142 Bacteria 1861
166 Ga0207698_10670580 3300026142 Unclassified 1029
167 Ga0207698_11123548 3300026142 Bacteria 799
168 Ga0207428_10111787 3300027907 Bacteria 2102
169 Ga0207428_10266183 3300027907 Unclassified 1276
170 Ga0268266_10000024 3300028379 Bacteria 490820
171 Ga0268266_10966346 3300028379 Bacteria 824
172 Ga0268265_10105315 3300028380 Bacteria 2288
173 Ga0268265_10603759 3300028380 Bacteria 1049
174 Ga0268264_10222001 3300028381 Bacteria 1740
175 Ga0268264_11015769 3300028381 Bacteria 836
176 Ga0268264_11153756 3300028381 Bacteria 784
177 Ga0265338_10051872 3300028800 Bacteria 3688
178 Ga0265327_10161189 3300031251 Bacteria 1036
179 Ga0307513_10058108 3300031456 Bacteria 4114
180 Ga0307513_10418275 3300031456 Bacteria 1071
181 Ga0307509_10043700 3300031507 Bacteria 4847
182 Ga0307509_10145967 3300031507 Bacteria 2292
183 Ga0307509_10259622 3300031507 Bacteria 1514
184 Ga0307508_10000806 3300031616 Bacteria 36719
185 Ga0307508_10004061 3300031616 Bacteria 14474
186 Ga0307516_10001798 3300031730 Bacteria 29426
187 Ga0307516_10042287 3300031730 Bacteria 4522
188 Ga0307414_11345903 3300032004 Unclassified 663
189 Ga0307510_10001159 3300033180 Bacteria 28372
190 Ga0307510_10006655 3300033180 Bacteria 13787
191 Ga0373936_0034399 3300035113 Bacteria 2013
192 Ga0373927_0308278 3300035695 Bacteria 1042
193 Ga0451789_0347228 3300041443 Bacteria 787
194 Ga0451791_1211133 3300041451 Bacteria 647
195 Ga0451793_1114848 3300041452 Bacteria 896
196 Ga0451807_1795140 3300041486 Bacteria 965
197 Ga0451835_0039189 3300041492 Bacteria 610
198 Ga0451839_0533497 3300041496 Bacteria 721
199 Ga0466972_0025912 3300044658 Bacteria 2905
200 Ga0466965_0268477 3300044683 Unclassified 919
201 Ga0495638_0089019 3300046460 Unclassified 1863
202 Ga0495638_0403076 3300046460 Bacteria 709
203 Ga0495650_0063784 3300046471 Unclassified 1468
204 Ga0495630_0368538 3300046517 Bacteria 1100
205 Ga0495648_0001619 3300046524 Bacteria 21893
206 Ga0495648_0021160 3300046524 Bacteria 4513
207 Ga0495642_0216861 3300046528 Bacteria 835
208 Ga0495668_0240972 3300046616 Bacteria 990
209 Ga0495611_0001187 3300046648 Bacteria 13510
210 Ga0495611_0077038 3300046648 Bacteria 1529
211 Ga0495625_0116671 3300046660 Bacteria 1821
212 Ga0495635_0695269 3300046663 Bacteria 659
213 Ga0495604_0549331 3300047317 Bacteria 745
214 Ga0495687_001432 3300047443 Bacteria 21944
215 Ga0495686_0030841 3300047472 Bacteria 3480
216 Ga0496105_0754923 3300048908 Bacteria 743
217 Ga0496115_0529003 3300048918 Unclassified 945
218 Ga0501037_0047780 3300049573 Unclassified 3136
219 Ga0501043_0685112 3300049579 Bacteria 750
220 Ga0501257_031328 3300049686 Bacteria 1283
221 Ga0501035_0059782 3300049822 Unclassified 3394
222 nmdc:mga08y16_17367_c1 3300050511 Bacteria 7576
223 nmdc:mga08y16_34215_c1 3300050511 Bacteria 5338
224 nmdc:mga08y16_790571_c1 3300050511 Bacteria 942
225 Ga0500635_0077236 3300053080 Bacteria 1191
226 Ga0500583_0004324 3300053092 Bacteria 4614
227 Ga0500650_0089911 3300053098 Bacteria 1437
228 Ga0500556_0277898 3300053104 Bacteria 657
229 Ga0500642_0000758 3300053130 Bacteria 9473
230 Ga0500568_0003845 3300053139 Bacteria 8192
231 Ga0500604_0004126 3300053151 Bacteria 3873
232 Ga0500616_0030457 3300053153 Bacteria 2963
233 Ga0500622_0003099 3300053156 Bacteria 11450
234 Ga0500622_0003600 3300053156 Bacteria 10205
235 Ga0500639_067786 3300053163 Bacteria 1825

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009176 Ga0105242_10051229 Ga0105242_100512293 169
2 3300006237 Ga0097621_100099748 Ga0097621_1000997482 173
3 3300006358 Ga0068871_100304939 Ga0068871_1003049392 173
4 3300026095 Ga0207676_10672720 Ga0207676_106727201 173
5 3300002737 JGI25162J39368_1001507 JGI25162J39368_10015076 174
6 3300003214 JGI25165J46597_1000461 JGI25165J46597_100046126 174
7 3300003320 rootH2_10196011 rootH2_101960111 174
8 3300003354 JGI25160J50197_1000938 JGI25160J50197_10009387 174
9 3300003354 JGI25160J50197_1004868 JGI25160J50197_10048682 174
10 3300003791 Ga0055530_10000556 Ga0055530_1000055618 174
11 3300003794 Ga0055531_10018097 Ga0055531_100180973 174
12 3300005459 Ga0068867_101056882 Ga0068867_1010568821 174
13 3300005539 Ga0068853_100330994 Ga0068853_1003309943 174
14 3300005543 Ga0070672_100276259 Ga0070672_1002762592 174
15 3300005548 Ga0070665_100590164 Ga0070665_1005901641 174
16 3300005564 Ga0070664_100621183 Ga0070664_1006211832 174
17 3300005577 Ga0068857_100577411 Ga0068857_1005774112 174
18 3300005578 Ga0068854_100138781 Ga0068854_1001387813 174
19 3300005614 Ga0068856_100286823 Ga0068856_1002868232 174
20 3300005616 Ga0068852_101196436 Ga0068852_1011964361 174
21 3300005617 Ga0068859_100055823 Ga0068859_1000558234 174
22 3300005719 Ga0068861_100001014 Ga0068861_10000101414 174
23 3300005841 Ga0068863_100058909 Ga0068863_1000589093 174
24 3300006237 Ga0097621_100216666 Ga0097621_1002166661 174
25 3300006237 Ga0097621_100298206 Ga0097621_1002982062 174
26 3300006358 Ga0068871_100013002 Ga0068871_1000130024 174
27 3300006844 Ga0075428_100114658 Ga0075428_1001146582 174
28 3300006881 Ga0068865_100208205 Ga0068865_1002082052 174
29 3300006931 Ga0097620_100055825 Ga0097620_1000558254 174
30 3300009545 Ga0105237_10250241 Ga0105237_102502411 174
31 3300009551 Ga0105238_10674349 Ga0105238_106743492 174
32 3300010375 Ga0105239_10000749 Ga0105239_1000074920 174
33 3300013102 Ga0157371_10257253 Ga0157371_102572532 174
34 3300013297 Ga0157378_10002500 Ga0157378_100025002 174
35 3300013306 Ga0163162_10037235 Ga0163162_100372353 174
36 3300025231 Ga0207427_100277 Ga0207427_10027732 174
37 3300025233 Ga0209437_100010 Ga0209437_10001018 174
38 3300025261 Ga0209233_1000017 Ga0209233_100001731 174
39 3300025298 Ga0209050_1000438 Ga0209050_100043815 174
40 3300025298 Ga0209050_1031412 Ga0209050_10314122 174
41 3300025302 Ga0207426_1000261 Ga0207426_100026119 174
42 3300025303 Ga0209051_1034565 Ga0209051_10345652 174
43 3300025304 Ga0209257_1001172 Ga0209257_100117219 174
44 3300025315 Ga0207697_10033156 Ga0207697_100331561 174
45 3300025321 Ga0207656_10076310 Ga0207656_100763102 174
46 3300025907 Ga0207645_10019165 Ga0207645_100191651 174
47 3300025911 Ga0207654_10224378 Ga0207654_102243782 174
48 3300025911 Ga0207654_10288192 Ga0207654_102881922 174
49 3300025912 Ga0207707_10852574 Ga0207707_108525742 174
50 3300025918 Ga0207662_10117036 Ga0207662_101170362 174
51 3300025925 Ga0207650_10431857 Ga0207650_104318571 174
52 3300025933 Ga0207706_10045617 Ga0207706_100456175 174
53 3300025942 Ga0207689_10691459 Ga0207689_106914591 174
54 3300025960 Ga0207651_10038924 Ga0207651_100389244 174
55 3300025961 Ga0207712_10577418 Ga0207712_105774182 174
56 3300025972 Ga0207668_10868784 Ga0207668_108687841 174
57 3300025981 Ga0207640_10222929 Ga0207640_102229293 174
58 3300025981 Ga0207640_10676691 Ga0207640_106766911 174
59 3300026041 Ga0207639_10300908 Ga0207639_103009083 174
60 3300026078 Ga0207702_10064976 Ga0207702_100649763 174
61 3300026088 Ga0207641_10019573 Ga0207641_100195735 174
62 3300026095 Ga0207676_10085461 Ga0207676_100854612 174
63 3300026142 Ga0207698_11123548 Ga0207698_111235481 174
64 3300027907 Ga0207428_10111787 Ga0207428_101117871 174
65 3300027907 Ga0207428_10266183 Ga0207428_102661832 174
66 3300028379 Ga0268266_10966346 Ga0268266_109663462 174
67 3300028380 Ga0268265_10105315 Ga0268265_101053153 174
68 3300028380 Ga0268265_10603759 Ga0268265_106037591 174
69 3300028381 Ga0268264_11153756 Ga0268264_111537561 174
70 3300028800 Ga0265338_10051872 Ga0265338_100518727 174
71 3300031456 Ga0307513_10418275 Ga0307513_104182752 174
72 3300031507 Ga0307509_10043700 Ga0307509_100437003 174
73 3300031507 Ga0307509_10145967 Ga0307509_101459673 174
74 3300031507 Ga0307509_10259622 Ga0307509_102596222 174
75 3300031616 Ga0307508_10000806 Ga0307508_1000080628 174
76 3300031616 Ga0307508_10004061 Ga0307508_1000406112 174
77 3300031730 Ga0307516_10042287 Ga0307516_100422876 174
78 3300032004 Ga0307414_11345903 Ga0307414_113459032 174
79 3300033180 Ga0307510_10001159 Ga0307510_1000115912 174
80 3300033180 Ga0307510_10006655 Ga0307510_1000665517 174
81 3300041443 Ga0451789_0347228 Ga0451789_0347228_233_760 174
82 3300041451 Ga0451791_1211133 Ga0451791_1211133_57_581 174
83 3300041486 Ga0451807_1795140 Ga0451807_1795140_92_619 174
84 3300041492 Ga0451835_0039189 Ga0451835_0039189_69_599 174
85 3300041496 Ga0451839_0533497 Ga0451839_0533497_123_647 174
86 3300046460 Ga0495638_0089019 Ga0495638_0089019_92_622 174
87 3300046460 Ga0495638_0403076 Ga0495638_0403076_64_594 174
88 3300046517 Ga0495630_0368538 Ga0495630_0368538_463_993 174
89 3300046663 Ga0495635_0695269 Ga0495635_0695269_97_627 174
90 3300047317 Ga0495604_0549331 Ga0495604_0549331_23_553 174
91 3300048908 Ga0496105_0754923 Ga0496105_0754923_60_593 174
92 3300048918 Ga0496115_0529003 Ga0496115_0529003_211_744 174
93 3300049686 Ga0501257_031328 Ga0501257_031328_79_609 174
94 3300050511 nmdc:mga08y16_17367_c1 nmdc:mga08y16_17367_c1_6093_6620 174
95 3300050511 nmdc:mga08y16_790571_c1 nmdc:mga08y16_790571_c1_377_904 174
96 3300053139 Ga0500568_0003845 Ga0500568_0003845_2474_3037 174
97 3300053151 Ga0500604_0004126 Ga0500604_0004126_29_559 174
98 3300053156 Ga0500622_0003099 Ga0500622_0003099_7455_7985 174
99 3300005458 Ga0070681_11003933 Ga0070681_110039332 176
100 3300053163 Ga0500639_067786 Ga0500639_067786_642_1205 176
101 3300003316 rootH1_10101844 rootH1_101018445 180
102 3300025934 Ga0207686_10038643 Ga0207686_100386432 180
103 3300031730 Ga0307516_10001798 Ga0307516_1000179824 180
104 3300053080 Ga0500635_0077236 Ga0500635_0077236_102_650 180
105 3300005548 Ga0070665_100000013 Ga0070665_10000001367 181
106 3300009147 Ga0114129_12051356 Ga0114129_120513561 181
107 3300028379 Ga0268266_10000024 Ga0268266_10000024333 181
108 3300046660 Ga0495625_0116671 Ga0495625_0116671_1092_1682 181
109 iso_pu_bacteria 8003151029 8003151271 181
110 3300003320 rootH2_10118260 rootH2_101182603 184
111 3300005331 Ga0070670_100656473 Ga0070670_1006564731 184
112 3300005456 Ga0070678_100350728 Ga0070678_1003507281 184
113 3300025960 Ga0207651_10083736 Ga0207651_100837361 184
114 3300026121 Ga0207683_10168340 Ga0207683_101683403 184
115 3300031251 Ga0265327_10161189 Ga0265327_101611892 184
116 3300046616 Ga0495668_0240972 Ga0495668_0240972_71_631 184
117 3300053098 Ga0500650_0089911 Ga0500650_0089911_115_675 184
118 3300000044 ARSoilOldRDRAFT_c003215 ARSoilOldRDRAFT_0032152 185
119 3300003316 rootH1_10173022 rootH1_101730224 185
120 3300005262 Ga0065165_1020583 Ga0065165_10205831 185
121 3300005290 Ga0065712_10077130 Ga0065712_100771304 185
122 3300005293 Ga0065715_10199501 Ga0065715_101995012 185
123 3300005328 Ga0070676_10035368 Ga0070676_100353683 185
124 3300005331 Ga0070670_100037260 Ga0070670_1000372603 185
125 3300005331 Ga0070670_100140416 Ga0070670_1001404162 185
126 3300005334 Ga0068869_100825769 Ga0068869_1008257691 185
127 3300005340 Ga0070689_100209004 Ga0070689_1002090042 185
128 3300005343 Ga0070687_100235917 Ga0070687_1002359171 185
129 3300005347 Ga0070668_100088752 Ga0070668_1000887523 185
130 3300005353 Ga0070669_100017522 Ga0070669_1000175228 185
131 3300005354 Ga0070675_100130845 Ga0070675_1001308453 185
132 3300005355 Ga0070671_100008726 Ga0070671_1000087264 185
133 3300005364 Ga0070673_100157829 Ga0070673_1001578292 185
134 3300005364 Ga0070673_100456996 Ga0070673_1004569962 185
135 3300005365 Ga0070688_100008340 Ga0070688_1000083409 185
136 3300005367 Ga0070667_100105350 Ga0070667_1001053502 185
137 3300005438 Ga0070701_10180188 Ga0070701_101801882 185
138 3300005444 Ga0070694_100967993 Ga0070694_1009679932 185
139 3300005457 Ga0070662_100265930 Ga0070662_1002659301 185
140 3300005466 Ga0070685_10018201 Ga0070685_100182015 185
141 3300005578 Ga0068854_100109121 Ga0068854_1001091211 185
142 3300005617 Ga0068859_100129315 Ga0068859_1001293155 185
143 3300005618 Ga0068864_100022323 Ga0068864_1000223235 185
144 3300005618 Ga0068864_100543188 Ga0068864_1005431882 185
145 3300005834 Ga0068851_10327866 Ga0068851_103278662 185
146 3300005843 Ga0068860_100048714 Ga0068860_1000487147 185
147 3300005843 Ga0068860_100207844 Ga0068860_1002078442 185
148 3300005844 Ga0068862_100035050 Ga0068862_1000350506 185
149 3300005844 Ga0068862_100371177 Ga0068862_1003711772 185
150 3300006237 Ga0097621_100712759 Ga0097621_1007127592 185
151 3300006931 Ga0097620_100129311 Ga0097620_1001293112 185
152 3300009093 Ga0105240_10031451 Ga0105240_100314516 185
153 3300009094 Ga0111539_10007486 Ga0111539_1000748613 185
154 3300009094 Ga0111539_11056498 Ga0111539_110564982 185
155 3300009174 Ga0105241_10298990 Ga0105241_102989902 185
156 3300009174 Ga0105241_10433214 Ga0105241_104332141 185
157 3300009177 Ga0105248_10045649 Ga0105248_100456497 185
158 3300009553 Ga0105249_10001275 Ga0105249_1000127511 185
159 3300009553 Ga0105249_10817439 Ga0105249_108174392 185
160 3300010375 Ga0105239_10008948 Ga0105239_100089486 185
161 3300010375 Ga0105239_10073040 Ga0105239_100730404 185
162 3300010375 Ga0105239_10172250 Ga0105239_101722502 185
163 3300010375 Ga0105239_10347766 Ga0105239_103477663 185
164 3300013105 Ga0157369_10115600 Ga0157369_101156002 185
165 3300013296 Ga0157374_10020491 Ga0157374_100204912 185
166 3300013296 Ga0157374_10068880 Ga0157374_100688802 185
167 3300013296 Ga0157374_10161225 Ga0157374_101612252 185
168 3300013296 Ga0157374_10300232 Ga0157374_103002322 185
169 3300013297 Ga0157378_10006167 Ga0157378_1000616712 185
170 3300013297 Ga0157378_10040408 Ga0157378_100404083 185
171 3300013297 Ga0157378_10137121 Ga0157378_101371212 185
172 3300013306 Ga0163162_10003528 Ga0163162_1000352815 185
173 3300013306 Ga0163162_10183105 Ga0163162_101831051 185
174 3300013306 Ga0163162_10808600 Ga0163162_108086002 185
175 3300013307 Ga0157372_10051435 Ga0157372_100514354 185
176 3300013307 Ga0157372_10323882 Ga0157372_103238823 185
177 3300013307 Ga0157372_10554212 Ga0157372_105542121 185
178 3300013308 Ga0157375_10024722 Ga0157375_100247225 185
179 3300013308 Ga0157375_10045695 Ga0157375_100456953 185
180 3300013308 Ga0157375_10568274 Ga0157375_105682742 185
181 3300014326 Ga0157380_10006266 Ga0157380_100062669 185
182 3300014745 Ga0157377_10008321 Ga0157377_100083212 185
183 3300014969 Ga0157376_10002380 Ga0157376_1000238012 185
184 3300014969 Ga0157376_10422856 Ga0157376_104228562 185
185 3300017792 Ga0163161_10010178 Ga0163161_100101783 185
186 3300017792 Ga0163161_10164417 Ga0163161_101644172 185
187 3300025250 Ga0209026_1017911 Ga0209026_10179111 185
188 3300025321 Ga0207656_10260952 Ga0207656_102609521 185
189 3300025904 Ga0207647_10415104 Ga0207647_104151041 185
190 3300025923 Ga0207681_10009753 Ga0207681_100097537 185
191 3300025925 Ga0207650_10049348 Ga0207650_100493483 185
192 3300025926 Ga0207659_11131144 Ga0207659_111311441 185
193 3300025931 Ga0207644_10030082 Ga0207644_100300823 185
194 3300025931 Ga0207644_10495628 Ga0207644_104956281 185
195 3300025936 Ga0207670_10178114 Ga0207670_101781141 185
196 3300025941 Ga0207711_10632501 Ga0207711_106325012 185
197 3300025942 Ga0207689_10118865 Ga0207689_101188652 185
198 3300025949 Ga0207667_10067990 Ga0207667_100679904 185
199 3300025972 Ga0207668_10098667 Ga0207668_100986672 185
200 3300025972 Ga0207668_11112129 Ga0207668_111121291 185
201 3300025986 Ga0207658_10037842 Ga0207658_100378424 185
202 3300026023 Ga0207677_10005600 Ga0207677_100056006 185
203 3300026035 Ga0207703_10887553 Ga0207703_108875531 185
204 3300026089 Ga0207648_10623461 Ga0207648_106234612 185
205 3300026095 Ga0207676_10005891 Ga0207676_100058917 185
206 3300026116 Ga0207674_10170672 Ga0207674_101706723 185
207 3300026118 Ga0207675_100139136 Ga0207675_1001391364 185
208 3300026121 Ga0207683_10173198 Ga0207683_101731982 185
209 3300026142 Ga0207698_10182379 Ga0207698_101823792 185
210 3300026142 Ga0207698_10670580 Ga0207698_106705801 185
211 3300028381 Ga0268264_10222001 Ga0268264_102220012 185
212 3300028381 Ga0268264_11015769 Ga0268264_110157691 185
213 3300031456 Ga0307513_10058108 Ga0307513_100581082 185
214 3300035113 Ga0373936_0034399 Ga0373936_0034399_865_1467 185
215 3300035695 Ga0373927_0308278 Ga0373927_0308278_63_626 185
216 3300041452 Ga0451793_1114848 Ga0451793_1114848_150_716 185
217 3300044658 Ga0466972_0025912 Ga0466972_0025912_1306_1959 185
218 3300044683 Ga0466965_0268477 Ga0466965_0268477_87_644 185
219 3300046471 Ga0495650_0063784 Ga0495650_0063784_647_1204 185
220 3300046524 Ga0495648_0001619 Ga0495648_0001619_530_1093 185
221 3300046524 Ga0495648_0021160 Ga0495648_0021160_738_1301 185
222 3300046528 Ga0495642_0216861 Ga0495642_0216861_37_600 185
223 3300046648 Ga0495611_0001187 Ga0495611_0001187_2809_3372 185
224 3300046648 Ga0495611_0077038 Ga0495611_0077038_130_735 185
225 3300047443 Ga0495687_001432 Ga0495687_001432_16279_16842 185
226 3300047472 Ga0495686_0030841 Ga0495686_0030841_1449_2009 185
227 3300049573 Ga0501037_0047780 Ga0501037_0047780_1434_1997 185
228 3300049579 Ga0501043_0685112 Ga0501043_0685112_151_714 185
229 3300049822 Ga0501035_0059782 Ga0501035_0059782_2503_3066 185
230 3300050511 nmdc:mga08y16_34215_c1 nmdc:mga08y16_34215_c1_3221_3781 185
231 3300053092 Ga0500583_0004324 Ga0500583_0004324_140_703 185
232 3300053104 Ga0500556_0277898 Ga0500556_0277898_64_639 185
233 3300053130 Ga0500642_0000758 Ga0500642_0000758_4987_5550 185
234 3300053153 Ga0500616_0030457 Ga0500616_0030457_19_582 185
235 3300053156 Ga0500622_0003600 Ga0500622_0003600_5544_6107 185

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

95

210

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xh2-assembly1.cif.gz_A dihydrofolate reductase-like protein sach in safracin biosynthesis 0.8271 6 183
7xh2-assembly1.cif.gz_A dihydrofolate reductase-like protein sach in safracin biosynthesis 0.8187 6 183
2xw7-assembly1.cif.gz_B structure of mycobacterium smegmatis putative reductase ms0308 0.8177 6 185
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8071 5 184
2xw7-assembly1.cif.gz_B structure of mycobacterium smegmatis putative reductase ms0308 0.8049 6 185
ID Description Score Start End Superfamily
2xw7B00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8177 6 185 3.40.430.10
2xw7B00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8049 6 185 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7919 5 184 3.40.430.10
3ky8B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7908 8 182 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7879 5 184 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A7Y5GZV2-F1-model_v4 Dihydrofolate reductase 0.9053 1 185 GO:0008703
GO:0009231
AF-A0A4Q3WB29-F1-model_v4 Dihydrofolate reductase 0.9012 62 185 GO:0008703
GO:0009231
AF-A0A7Y5GZV2-F1-model_v4 Dihydrofolate reductase 0.9007 1 185 GO:0008703
GO:0009231
AF-A0A6P1WA70-F1-model_v4 Dihydrofolate reductase 0.8928 12 185 GO:0008703
GO:0009231
AF-A0A2V5YER1-F1-model_v4 Deaminase 0.8875 12 185 GO:0008703
GO:0009231

Feature Viewer

pLDDT pTM Quality
73.83 0.68 Medium
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Predicted Structure (AlphaFold2)

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