F348382

General Info

Members Datasets Scaffolds Average Seq Length
235 177 470 382

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0015830|Ga0453684_0015830_6194_7510
Length 438
Sequence LDIDLRQIASVQQLFGWEFIKDLSCRKLGKICSILIKYNLPYLHLGVYLQIWKSIHAGTGKMDIKEFISGSYEQQNQFKSFLPGTINRDWLISDSAVIQLLSEADIKLGELNAFSQLVPDINFFIAMHVSKEATTSSRIEGTQTNIAEALQKLENISPEKRDDWEEVQNYIKAINEAVALLDELPLSNRLLKKTHHTLLQGVRGKNRLPGEFRLSQNWIGGASPADAVFIPPSNDKLPDLMSDFEKFLNNEAIPLPHLIRIGIAHYQFETIHPFLDGNGRIGRLLVTLYLVSKGLLSKPTLYLSAFLEKNKSLYYDNLTRVRTHNDLTQWLKFFLEGVRQTAENSIQTFRSIIELREKYEKGLIPTLGRKTKSSLEFMHYLYSNPVVDSQQVARALSVNSSTALRMIEDFIALGILVETTGYKRNRIFAFDSYLKLFE

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
44 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
91 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
92 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
98 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
99 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
104 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
105 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
106 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
107 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
108 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
112 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
113 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
114 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
116 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
117 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
121 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
122 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
123 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
124 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
125 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
126 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
133 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
134 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
145 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
146 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
153 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
154 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
155 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
156 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
165 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
166 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
167 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
168 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
169 2643221558 Rhizobium sp. Root149 Isolate Unclassified
170 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
171 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
172 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
173 2738543023 Pedobacter sp. OK628 Isolate Unclassified
174 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
175 2914759650 Rhizosphaericola mali Isolate Rhizosphere
176 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
177 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 95.32
Metatranscriptomes 0.43
Isolates 4.26

Biome Distribution

Category Percentage (%)
Aerial Root 0.43
Bulb 0
Endosphere 5.53
Nodule 0.43
Rhizoplane 1.7
Rhizosphere 81.7
Stem 0
Stem Tuber 0
Unclassified 3.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0015830 3300044712 Bacteria 11858
2 rootH2_10042646 3300003320 Bacteria 6260
3 rootH2_10215209 3300003320 Unclassified 2564
4 rootL2_10032338 3300003322 Bacteria 1446
5 rootH1_10061016 3300003323 Bacteria 1973
6 rootH1_10074674 3300003323 Bacteria 3966
7 rootH1_10087937 3300003323 Bacteria 3154
8 Ga0055540_1021500 3300003792 Bacteria 1673
9 Ga0055531_10033083 3300003794 Bacteria 1673
10 Ga0070658_10003843 3300005327 Bacteria 12310
11 Ga0070676_10000001 3300005328 Bacteria 443830
12 Ga0070676_10018058 3300005328 Bacteria 3906
13 Ga0070670_100000002 3300005331 Bacteria 568775
14 Ga0070692_10088954 3300005345 Bacteria 1675
15 Ga0070673_100176033 3300005364 Bacteria 1829
16 Ga0070667_100000018 3300005367 Bacteria 226033
17 Ga0070703_10000113 3300005406 Bacteria 41936
18 Ga0070714_100000130 3300005435 Bacteria 59277
19 Ga0070705_100008698 3300005440 Bacteria 5027
20 Ga0070700_100101152 3300005441 Bacteria 1899
21 Ga0070694_100048166 3300005444 Bacteria 2866
22 Ga0070708_100005315 3300005445 Bacteria 10209
23 Ga0070698_100088647 3300005471 Bacteria 3079
24 Ga0070699_100207412 3300005518 Bacteria 1744
25 Ga0070699_100276733 3300005518 Bacteria 1503
26 Ga0068853_100132875 3300005539 Viruses 2229
27 Ga0070686_100074318 3300005544 Bacteria 2234
28 Ga0070695_100126023 3300005545 Bacteria 1759
29 Ga0070695_100145611 3300005545 Bacteria 1648
30 Ga0070693_100020775 3300005547 Bacteria 3469
31 Ga0070693_100027191 3300005547 Bacteria 3097
32 Ga0070665_100005321 3300005548 Bacteria 13295
33 Ga0070704_100123492 3300005549 Bacteria 1993
34 Ga0068855_100011894 3300005563 Bacteria 10522
35 Ga0068854_100025895 3300005578 Bacteria 4026
36 Ga0068856_100007674 3300005614 Bacteria 10525
37 Ga0068856_100013444 3300005614 Bacteria 7922
38 Ga0068859_100005317 3300005617 Bacteria 13091
39 Ga0068859_100020027 3300005617 Bacteria 6718
40 Ga0068859_100153427 3300005617 Bacteria 2379
41 Ga0068864_100000003 3300005618 Bacteria 568775
42 Ga0068864_100270943 3300005618 Bacteria 1582
43 Ga0068851_10081560 3300005834 Bacteria 1690
44 Ga0068863_100000515 3300005841 Bacteria 39374
45 Ga0068863_100011296 3300005841 Bacteria 8648
46 Ga0068858_100253343 3300005842 Bacteria 1672
47 Ga0068860_100007268 3300005843 Bacteria 11077
48 Ga0068860_100350903 3300005843 Bacteria 1452
49 Ga0068862_100001344 3300005844 Bacteria 22837
50 Ga0081539_10015310 3300005985 Bacteria 5584
51 Ga0081539_10016610 3300005985 Bacteria 5237
52 Ga0075370_10085764 3300006353 Bacteria 1813
53 Ga0075433_10054117 3300006852 Bacteria 3501
54 Ga0075433_10094540 3300006852 Bacteria 2645
55 Ga0075434_100153251 3300006871 Bacteria 2325
56 Ga0075434_100275611 3300006871 Bacteria 1701
57 Ga0075436_100198551 3300006914 Bacteria 1420
58 Ga0097620_100005317 3300006931 Bacteria 13091
59 Ga0097620_100020027 3300006931 Bacteria 6718
60 Ga0097620_100153431 3300006931 Bacteria 2379
61 Ga0105251_10005383 3300009011 Bacteria 8383
62 Ga0105244_10019096 3300009036 Bacteria 3835
63 Ga0105240_10186895 3300009093 Bacteria 2439
64 Ga0105240_10477819 3300009093 Bacteria 1390
65 Ga0114129_10005974 3300009147 Bacteria 17241
66 Ga0114129_10342277 3300009147 Unclassified 1983
67 Ga0105237_10012968 3300009545 Bacteria 8751
68 Ga0105237_10074484 3300009545 Bacteria 3387
69 Ga0105239_10121724 3300010375 Unclassified 2898
70 Ga0157371_10002745 3300013102 Bacteria 16556
71 Ga0157371_10107810 3300013102 Bacteria 1977
72 Ga0157370_10040102 3300013104 Bacteria 4521
73 Ga0157370_10072188 3300013104 Bacteria 3257
74 Ga0157378_10070590 3300013297 Unclassified 3137
75 Ga0157372_10035779 3300013307 Bacteria 5468
76 Ga0157375_10245121 3300013308 Bacteria 1952
77 Ga0157375_10304321 3300013308 Bacteria 1758
78 Ga0163163_10000145 3300014325 Bacteria 74233
79 Ga0157380_10034485 3300014326 Bacteria 3904
80 Ga0183365_10001 3300015684 Bacteria 2090444
81 Ga0163161_10132281 3300017792 Bacteria 1883
82 Ga0209676_1026776 3300025292 Bacteria 1825
83 Ga0209758_1000105 3300025297 Bacteria 221415
84 Ga0209050_1009759 3300025298 Bacteria 4849
85 Ga0209051_1001739 3300025303 Bacteria 17361
86 Ga0209257_1020240 3300025304 Bacteria 2468
87 Ga0207656_10050644 3300025321 Bacteria 1794
88 Ga0207713_1026360 3300025735 Bacteria 2665
89 Ga0207653_10000011 3300025885 Bacteria 160949
90 Ga0207680_10011772 3300025903 Bacteria 4432
91 Ga0207645_10000001 3300025907 Bacteria 442754
92 Ga0207645_10020588 3300025907 Bacteria 4316
93 Ga0207705_10001804 3300025909 Bacteria 16884
94 Ga0207684_10138916 3300025910 Bacteria 2088
95 Ga0207671_10043375 3300025914 Bacteria 3326
96 Ga0207650_10000003 3300025925 Bacteria 1123235
97 Ga0207664_10000053 3300025929 Bacteria 128647
98 Ga0207711_10007824 3300025941 Bacteria 8932
99 Ga0207689_10117323 3300025942 Bacteria 2188
100 Ga0207667_10049907 3300025949 Bacteria 4417
101 Ga0207651_10149640 3300025960 Bacteria 1815
102 Ga0207640_10039898 3300025981 Bacteria 2975
103 Ga0207658_10000004 3300025986 Bacteria 569357
104 Ga0207703_10062149 3300026035 Bacteria 3059
105 Ga0207678_10163457 3300026067 Bacteria 1901
106 Ga0207708_10037103 3300026075 Bacteria 3712
107 Ga0207708_10149757 3300026075 Bacteria 1836
108 Ga0207702_10007004 3300026078 Bacteria 9645
109 Ga0207641_10000759 3300026088 Bacteria 34711
110 Ga0207641_10003503 3300026088 Bacteria 13896
111 Ga0207648_10059451 3300026089 Bacteria 3333
112 Ga0207676_10000003 3300026095 Bacteria 1123235
113 Ga0207698_10070863 3300026142 Bacteria 2763
114 Ga0268266_10004522 3300028379 Bacteria 13289
115 Ga0268265_10000515 3300028380 Bacteria 39605
116 Ga0268265_10117970 3300028380 Bacteria 2181
117 Ga0268264_10002681 3300028381 Bacteria 15540
118 Ga0268264_10247982 3300028381 Bacteria 1653
119 Ga0265337_1001523 3300028556 Bacteria 11373
120 Ga0265337_1006855 3300028556 Unclassified 4326
121 Ga0265337_1032321 3300028556 Bacteria 1548
122 Ga0265326_10015235 3300028558 Bacteria 2233
123 Ga0265319_1010981 3300028563 Unclassified 3744
124 Ga0265319_1017648 3300028563 Bacteria 2707
125 Ga0265334_10012758 3300028573 Bacteria 3526
126 Ga0265318_10035155 3300028577 Bacteria 1928
127 Ga0265336_10005457 3300028666 Bacteria 4686
128 Ga0265336_10006234 3300028666 Unclassified 4315
129 Ga0265336_10030558 3300028666 Bacteria 1677
130 Ga0265338_10001266 3300028800 Bacteria 41690
131 Ga0265338_10028655 3300028800 Bacteria 5547
132 Ga0265338_10152009 3300028800 Unclassified 1797
133 Ga0265330_10045739 3300031235 Bacteria 1930
134 Ga0265320_10000008 3300031240 Bacteria 296209
135 Ga0265320_10004023 3300031240 Bacteria 9665
136 Ga0265325_10002868 3300031241 Bacteria 11493
137 Ga0265327_10000027 3300031251 Bacteria 364541
138 Ga0265327_10003381 3300031251 Bacteria 15346
139 Ga0265316_10073753 3300031344 Unclassified 2628
140 Ga0307408_100006215 3300031548 Bacteria 7932
141 Ga0265313_10019603 3300031595 Bacteria 3758
142 Ga0316575_10014719 3300031665 Bacteria 2941
143 Ga0316575_10048049 3300031665 Bacteria 1696
144 Ga0316579_10065294 3300031691 Bacteria 1717
145 Ga0316576_10036583 3300031727 Bacteria 3509
146 Ga0316578_10022565 3300031728 Bacteria 3510
147 Ga0316577_10055548 3300031733 Bacteria 2209
148 Ga0307412_10013122 3300031911 Bacteria 4848
149 Ga0307414_10015692 3300032004 Bacteria 4579
150 Ga0316583_10008547 3300032133 Bacteria 3692
151 Ga0316585_10005197 3300032137 Bacteria 3668
152 Ga0316580_10004930 3300032139 Bacteria 3880
153 Ga0316588_1002044 3300033528 Bacteria 3455
154 Ga0316574_0021456 3300035398 Bacteria 3835
155 Ga0316582_0039139 3300036647 Bacteria 2950
156 Ga0316584_0020387 3300036712 Bacteria 4806
157 Ga0373925_0000640 3300037068 Bacteria 32919
158 Ga0395900_0256262 3300037418 Bacteria 1749
159 Ga0400490_24811 3300038726 Bacteria 2479
160 Ga0400490_38767 3300038726 Bacteria 2505
161 Ga0400491_00332 3300038727 Bacteria 23089
162 Ga0400485_18991 3300038735 Bacteria 5391
163 Ga0400486_27069 3300038742 Bacteria 4509
164 Ga0400489_66652 3300039093 Bacteria 4242
165 Ga0400489_87160 3300039093 Bacteria 8994
166 Ga0400487_46514 3300039110 Bacteria 7987
167 Ga0439458_0003061 3300042157 Bacteria 3986
168 Ga0451577_0000404 3300042876 Bacteria 78335
169 Ga0451577_0000724 3300042876 Bacteria 51075
170 Ga0453683_0026013 3300044673 Bacteria 3716
171 Ga0453683_0116054 3300044673 Bacteria 1684
172 Ga0453684_0000413 3300044712 Bacteria 174924
173 Ga0453684_0001783 3300044712 Bacteria 57316
174 Ga0453684_0005805 3300044712 Bacteria 24056
175 Ga0453684_0021873 3300044712 Bacteria 9519
176 Ga0453684_0027787 3300044712 Bacteria 8098
177 Ga0453684_0142098 3300044712 Bacteria 2865
178 Ga0451576_0000132 3300045051 Bacteria 190095
179 Ga0451576_0069297 3300045051 Bacteria 3670
180 Ga0451576_0089299 3300045051 Bacteria 3205
181 Ga0495627_004887 3300046453 Bacteria 5515
182 Ga0495638_0019008 3300046460 Bacteria 4551
183 Ga0495583_0000023 3300046506 Bacteria 280019
184 Ga0495621_0008409 3300046539 Bacteria 3094
185 Ga0495633_0000025 3300046558 Bacteria 218627
186 Ga0495633_0000314 3300046558 Bacteria 55070
187 Ga0495661_0077841 3300046665 Bacteria 1920
188 Ga0495670_0008549 3300046691 Bacteria 5040
189 Ga0495676_0032093 3300047321 Bacteria 4437
190 Ga0495686_0000006 3300047472 Bacteria 770778
191 Ga0496102_0101519 3300048905 Bacteria 2673
192 Ga0496103_0011186 3300048906 Bacteria 5313
193 Ga0496103_0031689 3300048906 Bacteria 3223
194 Ga0496112_0115100 3300048915 Bacteria 2660
195 Ga0496118_0008645 3300048921 Bacteria 10479
196 Ga0496125_0019460 3300048928 Bacteria 6402
197 Ga0501291_008075 3300049514 Bacteria 1444
198 Ga0501296_003178 3300049519 Bacteria 1746
199 Ga0501032_0002645 3300049569 Bacteria 13969
200 Ga0501034_0020619 3300049571 Bacteria 6733
201 Ga0501034_0039154 3300049571 Bacteria 4802
202 Ga0501034_0040702 3300049571 Bacteria 4703
203 Ga0501036_0105840 3300049572 Bacteria 2379
204 Ga0501038_0012158 3300049574 Bacteria 7857
205 Ga0501038_0192262 3300049574 Bacteria 1641
206 Ga0501039_0097787 3300049575 Bacteria 2289
207 Ga0501070_0253672 3300049586 Bacteria 1439
208 Ga0501202_003170 3300049652 Bacteria 2804
209 Ga0501223_011659 3300049663 Bacteria 1764
210 Ga0501224_005506 3300049664 Bacteria 1816
211 Ga0501260_004246 3300049689 Bacteria 1317
212 Ga0501261_005508 3300049690 Bacteria 1594
213 Ga0501035_0017331 3300049822 Bacteria 6641
214 Ga0501044_0001841 3300049823 Bacteria 24679
215 nmdc:mga07m45_15033_c1 3300050496 Bacteria 4133
216 nmdc:mga05p37_32410_c1 3300050507 Bacteria 6389
217 nmdc:mga0n895_142137_c1 3300050512 Bacteria 2429
218 nmdc:mga08x19_183234_c1 3300050514 Bacteria 1430
219 nmdc:mga0a205_118260_c1 3300050515 Bacteria 2549
220 nmdc:mga0a205_335499_c1 3300050515 Bacteria 1381
221 nmdc:mga0a205_46685_c1 3300050515 Bacteria 4177
222 Ga0500566_0000001 3300053094 Bacteria 1101031
223 Ga0500555_000042 3300053103 Bacteria 65300
224 Ga0500562_000027 3300053108 Bacteria 100118
225 Ga0500645_002442 3300053730 Bacteria 8271
226 2509396135 2509276022 Bacteria 6200534
227 2643810684 2643221558 Bacteria 5460675
228 2643984275 2643221595 Bacteria 6565519
229 2644156896 2643221627 Bacteria 6761570
230 2688391951 2687453341 Bacteria 6534136
231 2739304525 2738543023 Bacteria 6767879
232 2884636709 2884634485 Bacteria 3928637
233 2914763112 2914759650 Bacteria 4701441
234 2916701025 2916699645 Bacteria 3568996
235 2984500810 2984499530 Bacteria 5020881
236 Ga0453684_0015830
237 rootH2_10042646
238 rootH2_10215209
239 rootL2_10032338
240 rootH1_10061016
241 rootH1_10074674
242 rootH1_10087937
243 Ga0055540_1021500
244 Ga0055531_10033083
245 Ga0070658_10003843
246 Ga0070676_10000001
247 Ga0070676_10018058
248 Ga0070670_100000002
249 Ga0070692_10088954
250 Ga0070673_100176033
251 Ga0070667_100000018
252 Ga0070703_10000113
253 Ga0070714_100000130
254 Ga0070705_100008698
255 Ga0070700_100101152
256 Ga0070694_100048166
257 Ga0070708_100005315
258 Ga0070698_100088647
259 Ga0070699_100207412
260 Ga0070699_100276733
261 Ga0068853_100132875
262 Ga0070686_100074318
263 Ga0070695_100126023
264 Ga0070695_100145611
265 Ga0070693_100020775
266 Ga0070693_100027191
267 Ga0070665_100005321
268 Ga0070704_100123492
269 Ga0068855_100011894
270 Ga0068854_100025895
271 Ga0068856_100007674
272 Ga0068856_100013444
273 Ga0068859_100005317
274 Ga0068859_100020027
275 Ga0068859_100153427
276 Ga0068864_100000003
277 Ga0068864_100270943
278 Ga0068851_10081560
279 Ga0068863_100000515
280 Ga0068863_100011296
281 Ga0068858_100253343
282 Ga0068860_100007268
283 Ga0068860_100350903
284 Ga0068862_100001344
285 Ga0081539_10015310
286 Ga0081539_10016610
287 Ga0075370_10085764
288 Ga0075433_10054117
289 Ga0075433_10094540
290 Ga0075434_100153251
291 Ga0075434_100275611
292 Ga0075436_100198551
293 Ga0097620_100005317
294 Ga0097620_100020027
295 Ga0097620_100153431
296 Ga0105251_10005383
297 Ga0105244_10019096
298 Ga0105240_10186895
299 Ga0105240_10477819
300 Ga0114129_10005974
301 Ga0114129_10342277
302 Ga0105237_10012968
303 Ga0105237_10074484
304 Ga0105239_10121724
305 Ga0157371_10002745
306 Ga0157371_10107810
307 Ga0157370_10040102
308 Ga0157370_10072188
309 Ga0157378_10070590
310 Ga0157372_10035779
311 Ga0157375_10245121
312 Ga0157375_10304321
313 Ga0163163_10000145
314 Ga0157380_10034485
315 Ga0183365_10001
316 Ga0163161_10132281
317 Ga0209676_1026776
318 Ga0209758_1000105
319 Ga0209050_1009759
320 Ga0209051_1001739
321 Ga0209257_1020240
322 Ga0207656_10050644
323 Ga0207713_1026360
324 Ga0207653_10000011
325 Ga0207680_10011772
326 Ga0207645_10000001
327 Ga0207645_10020588
328 Ga0207705_10001804
329 Ga0207684_10138916
330 Ga0207671_10043375
331 Ga0207650_10000003
332 Ga0207664_10000053
333 Ga0207711_10007824
334 Ga0207689_10117323
335 Ga0207667_10049907
336 Ga0207651_10149640
337 Ga0207640_10039898
338 Ga0207658_10000004
339 Ga0207703_10062149
340 Ga0207678_10163457
341 Ga0207708_10037103
342 Ga0207708_10149757
343 Ga0207702_10007004
344 Ga0207641_10000759
345 Ga0207641_10003503
346 Ga0207648_10059451
347 Ga0207676_10000003
348 Ga0207698_10070863
349 Ga0268266_10004522
350 Ga0268265_10000515
351 Ga0268265_10117970
352 Ga0268264_10002681
353 Ga0268264_10247982
354 Ga0265337_1001523
355 Ga0265337_1006855
356 Ga0265337_1032321
357 Ga0265326_10015235
358 Ga0265319_1010981
359 Ga0265319_1017648
360 Ga0265334_10012758
361 Ga0265318_10035155
362 Ga0265336_10005457
363 Ga0265336_10006234
364 Ga0265336_10030558
365 Ga0265338_10001266
366 Ga0265338_10028655
367 Ga0265338_10152009
368 Ga0265330_10045739
369 Ga0265320_10000008
370 Ga0265320_10004023
371 Ga0265325_10002868
372 Ga0265327_10000027
373 Ga0265327_10003381
374 Ga0265316_10073753
375 Ga0307408_100006215
376 Ga0265313_10019603
377 Ga0316575_10014719
378 Ga0316575_10048049
379 Ga0316579_10065294
380 Ga0316576_10036583
381 Ga0316578_10022565
382 Ga0316577_10055548
383 Ga0307412_10013122
384 Ga0307414_10015692
385 Ga0316583_10008547
386 Ga0316585_10005197
387 Ga0316580_10004930
388 Ga0316588_1002044
389 Ga0316574_0021456
390 Ga0316582_0039139
391 Ga0316584_0020387
392 Ga0373925_0000640
393 Ga0395900_0256262
394 Ga0400490_24811
395 Ga0400490_38767
396 Ga0400491_00332
397 Ga0400485_18991
398 Ga0400486_27069
399 Ga0400489_66652
400 Ga0400489_87160
401 Ga0400487_46514
402 Ga0439458_0003061
403 Ga0451577_0000404
404 Ga0451577_0000724
405 Ga0453683_0026013
406 Ga0453683_0116054
407 Ga0453684_0000413
408 Ga0453684_0001783
409 Ga0453684_0005805
410 Ga0453684_0021873
411 Ga0453684_0027787
412 Ga0453684_0142098
413 Ga0451576_0000132
414 Ga0451576_0069297
415 Ga0451576_0089299
416 Ga0495627_004887
417 Ga0495638_0019008
418 Ga0495583_0000023
419 Ga0495621_0008409
420 Ga0495633_0000025
421 Ga0495633_0000314
422 Ga0495661_0077841
423 Ga0495670_0008549
424 Ga0495676_0032093
425 Ga0495686_0000006
426 Ga0496102_0101519
427 Ga0496103_0011186
428 Ga0496103_0031689
429 Ga0496112_0115100
430 Ga0496118_0008645
431 Ga0496125_0019460
432 Ga0501291_008075
433 Ga0501296_003178
434 Ga0501032_0002645
435 Ga0501034_0020619
436 Ga0501034_0039154
437 Ga0501034_0040702
438 Ga0501036_0105840
439 Ga0501038_0012158
440 Ga0501038_0192262
441 Ga0501039_0097787
442 Ga0501070_0253672
443 Ga0501202_003170
444 Ga0501223_011659
445 Ga0501224_005506
446 Ga0501260_004246
447 Ga0501261_005508
448 Ga0501035_0017331
449 Ga0501044_0001841
450 nmdc:mga07m45_15033_c1
451 nmdc:mga05p37_32410_c1
452 nmdc:mga0n895_142137_c1
453 nmdc:mga08x19_183234_c1
454 nmdc:mga0a205_118260_c1
455 nmdc:mga0a205_335499_c1
456 nmdc:mga0a205_46685_c1
457 Ga0500566_0000001
458 Ga0500555_000042
459 Ga0500562_000027
460 Ga0500645_002442
461 2509396135
462 2643810684
463 2643984275
464 2644156896
465 2688391951
466 2739304525
467 2884636709
468 2914763112
469 2916701025
470 2984500810

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13784

Fic_N

Fic/DOC family N-terminal

98

179

0.97

PF02661

Fic

Fic/DOC family

185

290

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qiz-assembly1.cif.gz_ZA specific features and methylation sites of a plant 80s ribosome 0.9248 325 368
7o7y-assembly1.cif.gz_Ay rabbit 80s ribosome stalled close to the mutated sars-cov-2 slippery site by a pseudoknot (high resolution) 0.9208 325 368
6zp4-assembly1.cif.gz_P sars-cov-2 nsp1 bound to a human 43s preinitiation ribosome complex - state 2 0.9179 325 368
8ppk-assembly1.cif.gz_Z bat-hp-cov nsp1 and eif1 bound to the human 40s small ribosomal subunit 0.9177 324 368
8r57-assembly1.cif.gz_Z cryoem structure of wheat 40s ribosomal subunit, head domain 0.9148 324 368
ID Description Score Start End Superfamily
3r61B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9175 326 356 1.10.10.10
af_B4FSL2_21_108_3.30.63.20 Alpha Beta;2-Layer Sandwich;Guanylate Kinase phosphate binding domain; 0.9168 324 368 3.30.63.20
2ia2D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9095 323 356 1.10.10.10
af_P76540_107_166_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.909 311 359 1.10.10.10
6g18Z00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9079 324 368 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1R4HGX1-F1-model_v4 Protein adenylyltransferase (EC 2.7.7.108) (AMPylator) 0.9923 1 375 GO:0000287
GO:0005524
GO:0042803
GO:0070733
AF-A0A7Y5G7F9-F1-model_v4 Fic family protein 0.9912 1 324 GO:0005524
AF-A0A3D4TEZ7-F1-model_v4 Cell filamentation protein Fic 0.9906 1 295 GO:0005524
AF-A0A139BRW2-F1-model_v4 Toxin Fic 0.99 1 280 GO:0005524
AF-A0A6I7WUS1-F1-model_v4 Cell filamentation protein Fic 0.9876 36 377 GO:0005524

Map