F348564

General Info

Members Datasets Scaffolds Average Seq Length
235 186 470 298

Family's Representative Sequence

Representative Sequence 3300050493|nmdc:mga0k408_1231_c2|nmdc:mga0k408_1231_c2_6629_7558
Length 309
Sequence MSIEENPQRWCIGLIGYGEVGRILAEDLRARGITVQTYDVKLGTCEDAAMRKHAAEHAVSLQGSHADLAACADCIISAVTASQTVAVAQACAHGIRPGGWFLDFNSASPGAKQRAATFIDDAGGRYVEAGVMTSVPPYRIKVPLLLSGPHASAFAPRINALGFAATVCSDRPGVASATKMCRSVMIKGLEAMVLESLATARHYGVEDAVLASLRETFPSIDWERQASYFFQRVIEHGRRRSEEMREVAQTVREAGLEPWLATGTAERQAWIADLADEGLFGSREHHDFARSEDWRVEADRILAHLAKKG

Samples

Sample ID Description Type Environment
1 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
9 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
26 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
46 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
47 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
85 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
86 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
87 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
88 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
89 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
90 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
103 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
104 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
105 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
106 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
107 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
108 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
141 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
142 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
143 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
144 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
145 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
146 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
147 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
148 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
149 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
150 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
151 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
152 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
153 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
156 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
157 2547132374 Acidovorax radicis N35 Isolate Unclassified
158 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
159 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
160 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
161 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
162 2643221570 Acidovorax sp. Root568 Isolate Unclassified
163 2643221596 Acidovorax sp. Root70 Isolate Unclassified
164 2643221609 Acidovorax sp. Root217 Isolate Unclassified
165 2643221611 Acidovorax sp. Root219 Isolate Unclassified
166 2643221652 Acidovorax sp. Root402 Isolate Unclassified
167 2643221658 Variovorax sp. Root411 Isolate Unclassified
168 2643221717 Acidovorax sp. Root267 Isolate Unclassified
169 2738541277 Variovorax sp. GV051 Isolate Unclassified
170 2738543012 Acidovorax sp. CF301 Isolate Unclassified
171 2738543013 Variovorax sp. BT01 Isolate Unclassified
172 2738543019 Variovorax sp. GV040 Isolate Unclassified
173 2816332133 Acidovorax radicis 2721A Isolate Unclassified
174 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
175 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
176 2885198086 Variovorax sp. 679 Isolate Unclassified
177 2885211737 Variovorax sp. 553 Isolate Unclassified
178 2885266251 Ralstonia sp. SET104 Isolate Nodule
179 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
180 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
181 2928070936 Variovorax gossypii 1167 Isolate Unclassified
182 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
183 2929520902 Variovorax beijingensis 502 Isolate Unclassified
184 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
185 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
186 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.38
Metatranscriptomes 0.85
Isolates 12.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 31.06
Nodule 0.43
Rhizoplane 4.26
Rhizosphere 49.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0k408_1231_c2 3300050493 Bacteria 12394
2 JGI25152J39213_1003459 3300002773 Bacteria 5385
3 JGI25159J45721_1006396 3300002987 Bacteria 3532
4 JGI25151J46595_10003021 3300003187 Bacteria 9562
5 JGI25153J46596_10002993 3300003215 Bacteria 9562
6 JGI25160J50197_1008494 3300003354 Bacteria 3908
7 Ga0006562J51391_1101676 3300003578 Bacteria 4950
8 Ga0006562J51391_1101679 3300003578 Bacteria 3370
9 Ga0055536_1004848 3300003781 Bacteria 6723
10 Ga0055534_1001653 3300003784 Bacteria 8599
11 Ga0055530_10000311 3300003791 Bacteria 44214
12 Ga0055530_10002637 3300003791 Bacteria 11238
13 Ga0055540_1000754 3300003792 Bacteria 21953
14 Ga0055540_1005932 3300003792 Bacteria 4975
15 Ga0055540_1006238 3300003792 Bacteria 4780
16 Ga0055531_10001335 3300003794 Bacteria 18427
17 Ga0055531_10010000 3300003794 Bacteria 4780
18 Ga0065165_1015208 3300005262 Bacteria 2946
19 Ga0070670_100115130 3300005331 Bacteria 2318
20 Ga0068869_100101794 3300005334 Bacteria 2174
21 Ga0068868_100014913 3300005338 Bacteria 5738
22 Ga0070667_100017248 3300005367 Bacteria 5981
23 Ga0070678_100191183 3300005456 Bacteria 1683
24 Ga0070681_10099554 3300005458 Bacteria 2853
25 Ga0070681_10160634 3300005458 Bacteria 2171
26 Ga0070679_100017462 3300005530 Bacteria 6945
27 Ga0070679_100058203 3300005530 Bacteria 3850
28 Ga0068855_100019390 3300005563 Bacteria 8171
29 Ga0068855_100457060 3300005563 Bacteria 1393
30 Ga0075365_10028424 3300006038 Bacteria 3566
31 Ga0075365_10059168 3300006038 Bacteria 2553
32 Ga0075363_100012499 3300006048 Bacteria 4096
33 Ga0075363_100077769 3300006048 Bacteria 1811
34 Ga0075363_100147008 3300006048 Bacteria 1329
35 Ga0075364_10009931 3300006051 Bacteria 5725
36 Ga0075432_10013531 3300006058 Bacteria 2772
37 Ga0075362_10027563 3300006177 Bacteria 2433
38 Ga0075367_10025280 3300006178 Bacteria 3358
39 Ga0075367_10029881 3300006178 Bacteria 3120
40 Ga0075366_10000542 3300006195 Bacteria 17576
41 Ga0075366_10001261 3300006195 Bacteria 12584
42 Ga0097621_100523469 3300006237 Bacteria 1076
43 Ga0075370_10099839 3300006353 Bacteria 1679
44 Ga0075370_10188430 3300006353 Bacteria 1215
45 Ga0075429_100197445 3300006880 Bacteria 1762
46 Ga0075435_100212633 3300007076 Bacteria 1641
47 Ga0105245_10559691 3300009098 Bacteria 1166
48 Ga0105248_10468479 3300009177 Bacteria 1420
49 Ga0105238_10030543 3300009551 Bacteria 5485
50 Ga0105239_10725616 3300010375 Bacteria 1137
51 Ga0157373_10020811 3300013100 Bacteria 4762
52 Ga0157378_10316286 3300013297 Bacteria 1515
53 Ga0163162_10028459 3300013306 Bacteria 5530
54 Ga0163163_10453135 3300014325 Bacteria 1343
55 Ga0182008_10013307 3300014497 Bacteria 4326
56 Ga0157376_10006636 3300014969 Bacteria 8193
57 Ga0182005_1016826 3300015265 Bacteria 2029
58 Ga0163161_10025227 3300017792 Bacteria 4206
59 Ga0207425_1001488 3300025245 Bacteria 9731
60 Ga0209129_1002187 3300025258 Bacteria 9834
61 Ga0209673_1019763 3300025273 Bacteria 2408
62 Ga0209130_1002441 3300025284 Bacteria 9309
63 Ga0209675_1002042 3300025291 Bacteria 10779
64 Ga0209676_1000004 3300025292 Bacteria 1138360
65 Ga0209025_1005956 3300025294 Bacteria 9704
66 Ga0209758_1004631 3300025297 Bacteria 11269
67 Ga0209050_1000002 3300025298 Bacteria 1792849
68 Ga0207426_1015458 3300025302 Bacteria 2765
69 Ga0209051_1000002 3300025303 Bacteria 1631846
70 Ga0209051_1000055 3300025303 Bacteria 277194
71 Ga0209051_1000096 3300025303 Bacteria 167399
72 Ga0209051_1000128 3300025303 Bacteria 142159
73 Ga0209257_1000002 3300025304 Bacteria 1767052
74 Ga0209257_1000101 3300025304 Bacteria 251553
75 Ga0207707_10078446 3300025912 Bacteria 2884
76 Ga0207707_10146729 3300025912 Bacteria 2063
77 Ga0207652_10045578 3300025921 Bacteria 3739
78 Ga0207652_10190798 3300025921 Bacteria 1843
79 Ga0207650_10092969 3300025925 Bacteria 2308
80 Ga0207687_10325125 3300025927 Bacteria 1246
81 Ga0207691_10065042 3300025940 Bacteria 3302
82 Ga0207711_10325983 3300025941 Bacteria 1420
83 Ga0207689_10077984 3300025942 Bacteria 2722
84 Ga0207667_10033780 3300025949 Bacteria 5496
85 Ga0207667_10110907 3300025949 Bacteria 2830
86 Ga0207677_10007665 3300026023 Bacteria 5991
87 Ga0207683_10216792 3300026121 Bacteria 1743
88 Ga0207683_10239398 3300026121 Bacteria 1655
89 Ga0209983_1017316 3300027665 Bacteria 1491
90 Ga0209974_10008844 3300027876 Bacteria 3431
91 Ga0207428_10013627 3300027907 Bacteria 7092
92 Ga0307515_10000084 3300028794 Bacteria 221434
93 Ga0265328_10068091 3300031239 Bacteria 1308
94 Ga0265327_10000565 3300031251 Bacteria 63101
95 Ga0265327_10005550 3300031251 Bacteria 10474
96 Ga0307513_10000006 3300031456 Bacteria 470848
97 Ga0307513_10020563 3300031456 Bacteria 7825
98 Ga0307513_10025752 3300031456 Bacteria 6803
99 Ga0307513_10152386 3300031456 Bacteria 2218
100 Ga0307408_100043167 3300031548 Bacteria 3208
101 Ga0307408_100384052 3300031548 Bacteria 1201
102 Ga0307514_10000641 3300031649 Bacteria 63711
103 Ga0307514_10002374 3300031649 Bacteria 19732
104 Ga0307516_10004632 3300031730 Bacteria 16868
105 Ga0307406_10033548 3300031901 Bacteria 3143
106 Ga0307414_10116277 3300032004 Bacteria 2047
107 Ga0395899_0023654 3300037312 Bacteria 4650
108 Ga0395900_0011196 3300037418 Bacteria 9173
109 Ga0395900_0041246 3300037418 Bacteria 4758
110 Ga0395898_0002404 3300037466 Bacteria 22217
111 Ga0395905_0000773 3300037471 Bacteria 42104
112 Ga0395905_0001095 3300037471 Bacteria 34067
113 Ga0395905_0002341 3300037471 Bacteria 21134
114 Ga0395905_0007791 3300037471 Bacteria 10621
115 Ga0395905_0038827 3300037471 Bacteria 4466
116 Ga0395905_0044713 3300037471 Bacteria 4155
117 Ga0395905_0442842 3300037471 Bacteria 1196
118 Ga0395901_0036015 3300038443 Bacteria 5113
119 Ga0395901_0046054 3300038443 Bacteria 4529
120 Ga0395901_0144990 3300038443 Bacteria 2496
121 Ga0395901_0206217 3300038443 Bacteria 2059
122 Ga0439449_0000154 3300042007 Bacteria 23362
123 Ga0439462_0054691 3300042015 Bacteria 1076
124 Ga0450894_006443 3300042131 Bacteria 1515
125 Ga0439446_0023005 3300042156 Bacteria 1770
126 Ga0439458_0008618 3300042157 Bacteria 2273
127 Ga0439464_0014690 3300042439 Bacteria 2107
128 Ga0466969_0008242 3300044656 Bacteria 5529
129 Ga0453683_0083097 3300044673 Bacteria 2006
130 Ga0466965_0158866 3300044683 Bacteria 1185
131 Ga0466966_0016545 3300044684 Bacteria 4870
132 Ga0466961_0027179 3300044693 Bacteria 3679
133 Ga0466959_0416888 3300045049 Bacteria 912
134 Ga0451576_0013555 3300045051 Bacteria 9117
135 Ga0451576_0495953 3300045051 Bacteria 1283
136 Ga0495638_0079182 3300046460 Bacteria 1999
137 Ga0495650_0001530 3300046471 Bacteria 21964
138 Ga0495639_0011183 3300046475 Bacteria 3867
139 Ga0495610_0024246 3300046512 Bacteria 3278
140 Ga0495610_0077983 3300046512 Bacteria 1529
141 Ga0495616_0000877 3300046513 Bacteria 21821
142 Ga0495631_0000620 3300046518 Bacteria 23340
143 Ga0495637_0003221 3300046520 Bacteria 8711
144 Ga0495654_0013128 3300046530 Bacteria 4436
145 Ga0495621_0009247 3300046539 Bacteria 2987
146 Ga0495622_0076633 3300046557 Bacteria 1541
147 Ga0495656_0048114 3300046615 Bacteria 1811
148 Ga0495668_0045817 3300046616 Bacteria 2431
149 Ga0495625_0000056 3300046660 Bacteria 186024
150 Ga0495599_0173824 3300046678 Bacteria 1329
151 Ga0495658_0017564 3300046683 Bacteria 3699
152 Ga0495670_0049969 3300046691 Bacteria 2093
153 Ga0495672_0000125 3300047320 Bacteria 118271
154 Ga0495676_0024070 3300047321 Bacteria 5276
155 Ga0495593_0009066 3300047673 Bacteria 5772
156 Ga0496101_0005902 3300048904 Bacteria 7841
157 Ga0496101_0057762 3300048904 Bacteria 2807
158 Ga0496102_0011155 3300048905 Bacteria 7739
159 Ga0496103_0034119 3300048906 Bacteria 3111
160 Ga0496108_0163218 3300048911 Bacteria 1926
161 Ga0496110_0061299 3300048913 Bacteria 3319
162 Ga0496114_0612329 3300048917 Bacteria 960
163 Ga0496121_0040100 3300048924 Bacteria 4112
164 Ga0496122_0089456 3300048925 Bacteria 2105
165 Ga0496125_0007022 3300048928 Bacteria 12047
166 Ga0496125_0045558 3300048928 Bacteria 3689
167 Ga0496126_0107739 3300048929 Bacteria 2430
168 Ga0496126_0192025 3300048929 Bacteria 1729
169 Ga0501034_0108493 3300049571 Bacteria 2767
170 Ga0501034_0275028 3300049571 Bacteria 1624
171 Ga0501036_0202640 3300049572 Bacteria 1669
172 Ga0501037_0018375 3300049573 Bacteria 5153
173 Ga0501038_0256076 3300049574 Bacteria 1384
174 Ga0501046_0234528 3300049580 Bacteria 1355
175 Ga0501223_008529 3300049663 Bacteria 2089
176 Ga0501080_0493246 3300049742 Bacteria 1095
177 Ga0501035_0230799 3300049822 Bacteria 1577
178 nmdc:mga03683_2976_c1 3300050489 Bacteria 5361
179 nmdc:mga03683_3616_c1 3300050489 Bacteria 5019
180 nmdc:mga03n38_117_c1 3300050490 Bacteria 17259
181 nmdc:mga00v17_195_c1 3300050491 Bacteria 36325
182 nmdc:mga0yw44_16189_c1 3300050492 Bacteria 4022
183 nmdc:mga0yw44_6111_c1 3300050492 Bacteria 5781
184 nmdc:mga0k408_535_c1 3300050493 Bacteria 20913
185 nmdc:mga07m45_38979_c1 3300050496 Bacteria 2654
186 nmdc:mga0rr50_163555_c1 3300050513 Bacteria 1808
187 Ga0500610_0001170 3300053079 Bacteria 8670
188 Ga0500643_006936 3300053087 Bacteria 4652
189 Ga0500651_0000087 3300053093 Bacteria 59423
190 Ga0500566_0013447 3300053094 Bacteria 4818
191 Ga0500562_000230 3300053108 Bacteria 14694
192 Ga0500562_012795 3300053108 Bacteria 2136
193 Ga0500571_000055 3300053110 Bacteria 35434
194 Ga0500593_000202 3300053117 Bacteria 24296
195 Ga0500594_0002535 3300053118 Bacteria 3974
196 Ga0500597_101139 3300053120 Bacteria 1253
197 Ga0500607_000181 3300053121 Bacteria 56273
198 Ga0500626_086414 3300053128 Bacteria 1380
199 Ga0500658_0002013 3300053134 Bacteria 7936
200 Ga0500658_0002588 3300053134 Bacteria 6994
201 Ga0500559_0010675 3300053136 Bacteria 3936
202 Ga0500564_005128 3300053138 Bacteria 5330
203 Ga0500616_0035020 3300053153 Bacteria 2731
204 Ga0500627_0024378 3300053158 Bacteria 2475
205 Ga0500638_018215 3300053162 Bacteria 3274
206 2548500324 2547132374 Bacteria 5530232
207 2599624796 2599185214 Bacteria 8209958
208 2599672808 2599185226 Bacteria 8233575
209 2599682742 2599185227 Bacteria 8246414
210 2599694417 2599185229 Bacteria 8216126
211 2643864640 2643221570 Bacteria 5103772
212 2643992745 2643221596 Bacteria 5006805
213 2644058340 2643221609 Bacteria 6756331
214 2644073392 2643221611 Bacteria 6820941
215 2644296436 2643221652 Bacteria 5140275
216 2644329130 2643221658 Bacteria 6064537
217 2644647127 2643221717 Bacteria 5676132
218 2738721068 2738541277 Bacteria 7458140
219 2739244318 2738543012 Bacteria 7115078
220 2739249149 2738543013 Bacteria 5618633
221 2739280267 2738543019 Bacteria 7459457
222 2816469749 2816332133 Bacteria 7249298
223 2831265857 2831265667 Bacteria 7184833
224 2881105340 2881101125 Bacteria 4590519
225 2885203507 2885198086 Bacteria 7212419
226 2885217143 2885211737 Bacteria 7212420
227 2885267953 2885266251 Bacteria 4796748
228 2904483808 2904479285 Bacteria 5073931
229 2919705019 2919704043 Bacteria 5560311
230 2928074837 2928070936 Bacteria 8062541
231 2928088986 2928084124 Bacteria 7159212
232 2929522148 2929520902 Bacteria 6765052
233 2939634151 2939631187 Bacteria 6118131
234 2945972508 2945972063 Bacteria 6086495
235 2990715222 2990710928 Bacteria 5002431
236 nmdc:mga0k408_1231_c2
237 JGI25152J39213_1003459
238 JGI25159J45721_1006396
239 JGI25151J46595_10003021
240 JGI25153J46596_10002993
241 JGI25160J50197_1008494
242 Ga0006562J51391_1101676
243 Ga0006562J51391_1101679
244 Ga0055536_1004848
245 Ga0055534_1001653
246 Ga0055530_10000311
247 Ga0055530_10002637
248 Ga0055540_1000754
249 Ga0055540_1005932
250 Ga0055540_1006238
251 Ga0055531_10001335
252 Ga0055531_10010000
253 Ga0065165_1015208
254 Ga0070670_100115130
255 Ga0068869_100101794
256 Ga0068868_100014913
257 Ga0070667_100017248
258 Ga0070678_100191183
259 Ga0070681_10099554
260 Ga0070681_10160634
261 Ga0070679_100017462
262 Ga0070679_100058203
263 Ga0068855_100019390
264 Ga0068855_100457060
265 Ga0075365_10028424
266 Ga0075365_10059168
267 Ga0075363_100012499
268 Ga0075363_100077769
269 Ga0075363_100147008
270 Ga0075364_10009931
271 Ga0075432_10013531
272 Ga0075362_10027563
273 Ga0075367_10025280
274 Ga0075367_10029881
275 Ga0075366_10000542
276 Ga0075366_10001261
277 Ga0097621_100523469
278 Ga0075370_10099839
279 Ga0075370_10188430
280 Ga0075429_100197445
281 Ga0075435_100212633
282 Ga0105245_10559691
283 Ga0105248_10468479
284 Ga0105238_10030543
285 Ga0105239_10725616
286 Ga0157373_10020811
287 Ga0157378_10316286
288 Ga0163162_10028459
289 Ga0163163_10453135
290 Ga0182008_10013307
291 Ga0157376_10006636
292 Ga0182005_1016826
293 Ga0163161_10025227
294 Ga0207425_1001488
295 Ga0209129_1002187
296 Ga0209673_1019763
297 Ga0209130_1002441
298 Ga0209675_1002042
299 Ga0209676_1000004
300 Ga0209025_1005956
301 Ga0209758_1004631
302 Ga0209050_1000002
303 Ga0207426_1015458
304 Ga0209051_1000002
305 Ga0209051_1000055
306 Ga0209051_1000096
307 Ga0209051_1000128
308 Ga0209257_1000002
309 Ga0209257_1000101
310 Ga0207707_10078446
311 Ga0207707_10146729
312 Ga0207652_10045578
313 Ga0207652_10190798
314 Ga0207650_10092969
315 Ga0207687_10325125
316 Ga0207691_10065042
317 Ga0207711_10325983
318 Ga0207689_10077984
319 Ga0207667_10033780
320 Ga0207667_10110907
321 Ga0207677_10007665
322 Ga0207683_10216792
323 Ga0207683_10239398
324 Ga0209983_1017316
325 Ga0209974_10008844
326 Ga0207428_10013627
327 Ga0307515_10000084
328 Ga0265328_10068091
329 Ga0265327_10000565
330 Ga0265327_10005550
331 Ga0307513_10000006
332 Ga0307513_10020563
333 Ga0307513_10025752
334 Ga0307513_10152386
335 Ga0307408_100043167
336 Ga0307408_100384052
337 Ga0307514_10000641
338 Ga0307514_10002374
339 Ga0307516_10004632
340 Ga0307406_10033548
341 Ga0307414_10116277
342 Ga0395899_0023654
343 Ga0395900_0011196
344 Ga0395900_0041246
345 Ga0395898_0002404
346 Ga0395905_0000773
347 Ga0395905_0001095
348 Ga0395905_0002341
349 Ga0395905_0007791
350 Ga0395905_0038827
351 Ga0395905_0044713
352 Ga0395905_0442842
353 Ga0395901_0036015
354 Ga0395901_0046054
355 Ga0395901_0144990
356 Ga0395901_0206217
357 Ga0439449_0000154
358 Ga0439462_0054691
359 Ga0450894_006443
360 Ga0439446_0023005
361 Ga0439458_0008618
362 Ga0439464_0014690
363 Ga0466969_0008242
364 Ga0453683_0083097
365 Ga0466965_0158866
366 Ga0466966_0016545
367 Ga0466961_0027179
368 Ga0466959_0416888
369 Ga0451576_0013555
370 Ga0451576_0495953
371 Ga0495638_0079182
372 Ga0495650_0001530
373 Ga0495639_0011183
374 Ga0495610_0024246
375 Ga0495610_0077983
376 Ga0495616_0000877
377 Ga0495631_0000620
378 Ga0495637_0003221
379 Ga0495654_0013128
380 Ga0495621_0009247
381 Ga0495622_0076633
382 Ga0495656_0048114
383 Ga0495668_0045817
384 Ga0495625_0000056
385 Ga0495599_0173824
386 Ga0495658_0017564
387 Ga0495670_0049969
388 Ga0495672_0000125
389 Ga0495676_0024070
390 Ga0495593_0009066
391 Ga0496101_0005902
392 Ga0496101_0057762
393 Ga0496102_0011155
394 Ga0496103_0034119
395 Ga0496108_0163218
396 Ga0496110_0061299
397 Ga0496114_0612329
398 Ga0496121_0040100
399 Ga0496122_0089456
400 Ga0496125_0007022
401 Ga0496125_0045558
402 Ga0496126_0107739
403 Ga0496126_0192025
404 Ga0501034_0108493
405 Ga0501034_0275028
406 Ga0501036_0202640
407 Ga0501037_0018375
408 Ga0501038_0256076
409 Ga0501046_0234528
410 Ga0501223_008529
411 Ga0501080_0493246
412 Ga0501035_0230799
413 nmdc:mga03683_2976_c1
414 nmdc:mga03683_3616_c1
415 nmdc:mga03n38_117_c1
416 nmdc:mga00v17_195_c1
417 nmdc:mga0yw44_16189_c1
418 nmdc:mga0yw44_6111_c1
419 nmdc:mga0k408_535_c1
420 nmdc:mga07m45_38979_c1
421 nmdc:mga0rr50_163555_c1
422 Ga0500610_0001170
423 Ga0500643_006936
424 Ga0500651_0000087
425 Ga0500566_0013447
426 Ga0500562_000230
427 Ga0500562_012795
428 Ga0500571_000055
429 Ga0500593_000202
430 Ga0500594_0002535
431 Ga0500597_101139
432 Ga0500607_000181
433 Ga0500626_086414
434 Ga0500658_0002013
435 Ga0500658_0002588
436 Ga0500559_0010675
437 Ga0500564_005128
438 Ga0500616_0035020
439 Ga0500627_0024378
440 Ga0500638_018215
441 2548500324
442 2599624796
443 2599672808
444 2599682742
445 2599694417
446 2643864640
447 2643992745
448 2644058340
449 2644073392
450 2644296436
451 2644329130
452 2644647127
453 2738721068
454 2739244318
455 2739249149
456 2739280267
457 2816469749
458 2831265857
459 2881105340
460 2885203507
461 2885217143
462 2885267953
463 2904483808
464 2919705019
465 2928074837
466 2928088986
467 2929522148
468 2939634151
469 2945972508
470 2990715222

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09130

DUF1932

Domain of unknown function (DUF1932)

200

271

0.97

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

11

153

0.92

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

11

103

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qsg-assembly1.cif.gz_A-2 crystal structure of nad-binding phosphogluconate dehydrogenase-like protein from alicyclobacillus acidocaldarius 0.8958 3 294
3qsg-assembly1.cif.gz_A-2 crystal structure of nad-binding phosphogluconate dehydrogenase-like protein from alicyclobacillus acidocaldarius 0.8899 3 294
4ezb-assembly1.cif.gz_A-2 crystal structure of the conserved hypothetical protein from sinorhizobium meliloti 1021 0.8522 1 296
4ezb-assembly1.cif.gz_A-2 crystal structure of the conserved hypothetical protein from sinorhizobium meliloti 1021 0.8367 1 296
1i36-assembly1.cif.gz_A structure of conserved protein mth1747 of unknown function reveals structural similarity with 3-hydroxyacid dehydrogenases 0.8116 3 273
ID Description Score Start End Superfamily
4ezbA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9437 3 175 3.40.50.720
3qsgA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9082 5 175 3.40.50.720
3qsgA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8979 5 175 3.40.50.720
4ezbA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8979 3 175 3.40.50.720
1i36B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.895 3 175 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1V6FTU0-F1-model_v4 Phosphogluconate dehydrogenase NAD-binding putative C-terminal domain-containing protein 0.989 140 295
AF-A0A4D7QGK3-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9741 2 267 GO:0016054
GO:0016491
GO:0050661
AF-A0A7W5U9Z9-F1-model_v4 deleted 0.9716 1 296
AF-A0A150ZAN9-F1-model_v4 deleted 0.9688 2 271
AF-A0A3N5LXV3-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9666 3 121 GO:0050661

Map