F348640
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 235 | 173 | 470 | 641 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2919709256|2919713296 |
| Length | 648 |
| Sequence | LFPVPAEWATRARMNEDRRMADHKRSLEDADSYWLEQAARLNWMSPPSKASESSFDEADFGISWFADGTLNVSVNCLDRHLADHGDSVAIIWEPDDPAETPRRLTYRQLHHAVCRFANVLKDAGARKGDRVTLYLPMIPEAAIALLACARIGAIHSVVFGGFSPEALAGRITDCDSTILVTADEGRRGGKRVPLKANVDAALAMDHCTSIHRVIVVQATGGAIDMQPGRDIWYHDVMAGVVSDCPPEPMNACDPLFLLYTSGSTGKPKGVVHGSGGYLLWASLTHELCFDYRPGDVYWCAADIGWVTGHSYIVYGPLANGATTLMYEGLPSWPTPSRIWQVVDRHQVHTLFTAPTVLRALMKEGDDFVTATDRSSLRLLGSVGEPINPEAWRWYHAIAGEGRCPIIDTWWQTETGAAMIAPMPGATALKPGSATFPLPGVEPQIVDGEGVVQQGPCEGNLVIARSWPGQMQTVWNDHDRFFQTYFSTFPGTYTTGDGARRDADGYYWITGRVDDVINVSGHRMGTAEVESALVLHAKVAEAAVVGFPHDIKGQGIYAYVTLNMGEEPSDSLRRALVQWVRAEIGPIATPDVIQFAPGLPKTRSGKIMRRILRKIAEGDVSAQALGDISTLADPTVVKELVRTRAIVPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300000041 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 3 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 4 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 5 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 6 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 7 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 9 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 10 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 11 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 12 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 13 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 14 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 15 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 25 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 27 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 30 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 31 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 32 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 33 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 34 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 35 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 36 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 37 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 38 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 39 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 50 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 52 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 55 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 62 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 89 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 90 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 93 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 94 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 95 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 96 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 97 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 98 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 99 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 100 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 101 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 102 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 103 | 3300041410 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 | Metagenome | Rhizosphere |
| 104 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 105 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 106 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 107 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 119 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 120 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 121 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 122 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 123 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 124 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 125 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 126 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 127 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 128 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 129 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 130 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 131 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 132 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 133 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 134 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 138 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 139 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 140 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 141 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 142 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 143 | 3300049776 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought | Metagenome | Rhizosphere |
| 144 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049853 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought | Metagenome | Rhizosphere |
| 146 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 147 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 148 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 149 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 150 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 151 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 152 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 153 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 154 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 155 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 156 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 157 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 158 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 159 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 160 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 161 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 162 | 3300053724 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere | Metagenome | Endosphere |
| 163 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 164 | 3300053735 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere | Metagenome | Endosphere |
| 165 | 2919709256 | Sphingobium xenophagum 4256 | Isolate | Unclassified |
| 166 | 2512564014 | Sphingobium sp. AP49 | Isolate | Rhizosphere |
| 167 | 2582581305 | Rhizorhabdus wittichii YR128 | Isolate | Rhizosphere |
| 168 | 2599185354 | Sphingomonas sp. NFR15 | Isolate | Rhizoplane |
| 169 | 2643221622 | Sphingomonas sp. Root241 | Isolate | Unclassified |
| 170 | 2751185897 | Sphingomonas panacis DCY99 | Isolate | Unclassified |
| 171 | 2775507255 | Sphingobium indicum B90A | Isolate | Rhizosphere |
| 172 | 2879163058 | Sphingomonas pokkalii L3B27 | Isolate | Rhizosphere |
| 173 | 8057101203 | Sphingomonas lycopersici MMSM20 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.32 |
| Metatranscriptomes | 0 |
| Isolates | 4.68 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 27.23 |
| Nodule | 0 |
| Rhizoplane | 5.11 |
| Rhizosphere | 56.6 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | ARcpr5oldR_c000892 | 3300000041 | Bacteria | 3314 |
| 2 | JGI24739J22299_10002297 | 3300001989 | Bacteria | 7358 |
| 3 | JGI24738J21930_10000531 | 3300002075 | Bacteria | 10892 |
| 4 | JGI25165J46597_1000104 | 3300003214 | Bacteria | 152363 |
| 5 | JGI25153J46596_10000027 | 3300003215 | Bacteria | 210760 |
| 6 | JGI25153J46596_10000179 | 3300003215 | Bacteria | 62415 |
| 7 | JGI25153J46596_10005544 | 3300003215 | Bacteria | 6603 |
| 8 | Ga0055542_1000025 | 3300003762 | Bacteria | 263538 |
| 9 | Ga0055529_1000014 | 3300003763 | Bacteria | 367283 |
| 10 | Ga0055537_1001119 | 3300003773 | Bacteria | 11571 |
| 11 | Ga0055537_1001299 | 3300003773 | Bacteria | 10300 |
| 12 | Ga0055524_1000409 | 3300003775 | Bacteria | 36411 |
| 13 | Ga0055530_10000638 | 3300003791 | Bacteria | 30190 |
| 14 | Ga0055540_1002833 | 3300003792 | Bacteria | 8843 |
| 15 | Ga0055531_10000640 | 3300003794 | Bacteria | 30187 |
| 16 | Ga0055531_10006433 | 3300003794 | Bacteria | 6669 |
| 17 | Ga0065165_1001477 | 3300005262 | Bacteria | 25096 |
| 18 | Ga0065704_10071796 | 3300005289 | Bacteria | 9910 |
| 19 | Ga0070682_100000791 | 3300005337 | Bacteria | 18585 |
| 20 | Ga0070661_100010820 | 3300005344 | Bacteria | 6351 |
| 21 | Ga0070668_100000243 | 3300005347 | Bacteria | 35866 |
| 22 | Ga0070671_100000607 | 3300005355 | Bacteria | 25566 |
| 23 | Ga0070671_100036974 | 3300005355 | Bacteria | 4048 |
| 24 | Ga0070674_100005833 | 3300005356 | Bacteria | 7156 |
| 25 | Ga0070667_100000036 | 3300005367 | Bacteria | 172536 |
| 26 | Ga0070667_100000329 | 3300005367 | Bacteria | 52918 |
| 27 | Ga0070667_100001498 | 3300005367 | Bacteria | 20915 |
| 28 | Ga0070663_100001400 | 3300005455 | Bacteria | 13172 |
| 29 | Ga0070678_100000005 | 3300005456 | Bacteria | 70019 |
| 30 | Ga0070681_10091153 | 3300005458 | Bacteria | 2998 |
| 31 | Ga0068853_100000953 | 3300005539 | Bacteria | 20309 |
| 32 | Ga0070693_100024128 | 3300005547 | Bacteria | 3258 |
| 33 | Ga0068855_100000950 | 3300005563 | Bacteria | 36069 |
| 34 | Ga0070664_100039603 | 3300005564 | Bacteria | 3972 |
| 35 | Ga0068852_100064121 | 3300005616 | Bacteria | 3202 |
| 36 | Ga0068859_100025907 | 3300005617 | Bacteria | 5884 |
| 37 | Ga0068859_100035823 | 3300005617 | Bacteria | 4980 |
| 38 | Ga0068864_100001683 | 3300005618 | Bacteria | 18178 |
| 39 | Ga0068863_100003210 | 3300005841 | Bacteria | 16183 |
| 40 | Ga0068863_100073650 | 3300005841 | Bacteria | 3231 |
| 41 | Ga0068858_100000174 | 3300005842 | Bacteria | 68247 |
| 42 | Ga0068858_100002141 | 3300005842 | Bacteria | 20011 |
| 43 | Ga0068858_100003476 | 3300005842 | Bacteria | 15613 |
| 44 | Ga0068860_100000063 | 3300005843 | Bacteria | 189519 |
| 45 | Ga0068860_100000980 | 3300005843 | Bacteria | 31603 |
| 46 | Ga0068860_100011325 | 3300005843 | Bacteria | 8789 |
| 47 | Ga0075368_10000361 | 3300006042 | Bacteria | 13365 |
| 48 | Ga0075363_100023823 | 3300006048 | Bacteria | 3107 |
| 49 | Ga0075432_10001118 | 3300006058 | Bacteria | 8588 |
| 50 | Ga0075367_10000683 | 3300006178 | Bacteria | 13030 |
| 51 | Ga0075370_10000874 | 3300006353 | Bacteria | 12277 |
| 52 | Ga0097620_100025906 | 3300006931 | Bacteria | 5884 |
| 53 | Ga0097620_100035823 | 3300006931 | Bacteria | 4980 |
| 54 | Ga0105240_10000220 | 3300009093 | Bacteria | 115299 |
| 55 | Ga0105240_10051263 | 3300009093 | Bacteria | 5196 |
| 56 | Ga0105245_10001185 | 3300009098 | Bacteria | 23603 |
| 57 | Ga0105245_10025569 | 3300009098 | Bacteria | 5193 |
| 58 | Ga0105243_10000030 | 3300009148 | Bacteria | 190342 |
| 59 | Ga0105241_10013586 | 3300009174 | Bacteria | 5968 |
| 60 | Ga0105248_10001360 | 3300009177 | Bacteria | 27285 |
| 61 | Ga0105237_10000099 | 3300009545 | Bacteria | 120098 |
| 62 | Ga0105237_10017470 | 3300009545 | Bacteria | 7436 |
| 63 | Ga0105237_10033978 | 3300009545 | Bacteria | 5166 |
| 64 | Ga0105239_10000111 | 3300010375 | Bacteria | 115283 |
| 65 | Ga0157371_10000183 | 3300013102 | Bacteria | 92426 |
| 66 | Ga0157380_10016480 | 3300014326 | Bacteria | 5451 |
| 67 | Ga0213875_10000135 | 3300021388 | Bacteria | 82147 |
| 68 | Ga0209563_100030 | 3300025230 | Bacteria | 489259 |
| 69 | Ga0207425_1000005 | 3300025245 | Bacteria | 900502 |
| 70 | Ga0209148_1000011 | 3300025254 | Bacteria | 1196503 |
| 71 | Ga0209233_1000164 | 3300025261 | Bacteria | 152430 |
| 72 | Ga0209565_1000007 | 3300025263 | Bacteria | 784361 |
| 73 | Ga0209565_1000231 | 3300025263 | Bacteria | 61384 |
| 74 | Ga0209455_1000006 | 3300025272 | Bacteria | 1196503 |
| 75 | Ga0209673_1002158 | 3300025273 | Bacteria | 14570 |
| 76 | Ga0209025_1000515 | 3300025294 | Bacteria | 73801 |
| 77 | Ga0209564_1000619 | 3300025295 | Bacteria | 54397 |
| 78 | Ga0209758_1000002 | 3300025297 | Bacteria | 1400310 |
| 79 | Ga0209758_1000007 | 3300025297 | Bacteria | 1270410 |
| 80 | Ga0209758_1001588 | 3300025297 | Bacteria | 26009 |
| 81 | Ga0209050_1000001 | 3300025298 | Bacteria | 3563507 |
| 82 | Ga0209050_1000010 | 3300025298 | Bacteria | 980454 |
| 83 | Ga0209050_1000483 | 3300025298 | Bacteria | 69796 |
| 84 | Ga0209050_1001456 | 3300025298 | Bacteria | 25372 |
| 85 | Ga0209256_1000008 | 3300025299 | Bacteria | 975723 |
| 86 | Ga0209051_1000999 | 3300025303 | Bacteria | 27167 |
| 87 | Ga0209257_1000027 | 3300025304 | Bacteria | 703541 |
| 88 | Ga0209257_1001497 | 3300025304 | Bacteria | 27461 |
| 89 | Ga0209257_1004551 | 3300025304 | Bacteria | 10618 |
| 90 | Ga0209257_1004735 | 3300025304 | Bacteria | 10173 |
| 91 | Ga0207699_10066373 | 3300025906 | Bacteria | 2190 |
| 92 | Ga0207705_10000752 | 3300025909 | Bacteria | 26709 |
| 93 | Ga0207654_10000621 | 3300025911 | Bacteria | 20025 |
| 94 | Ga0207695_10000213 | 3300025913 | Bacteria | 155843 |
| 95 | Ga0207695_10007339 | 3300025913 | Bacteria | 14071 |
| 96 | Ga0207671_10000918 | 3300025914 | Bacteria | 37118 |
| 97 | Ga0207650_10004626 | 3300025925 | Bacteria | 9413 |
| 98 | Ga0207687_10001970 | 3300025927 | Bacteria | 14125 |
| 99 | Ga0207700_10017035 | 3300025928 | Bacteria | 4842 |
| 100 | Ga0207644_10000119 | 3300025931 | Bacteria | 58090 |
| 101 | Ga0207644_10030767 | 3300025931 | Bacteria | 3736 |
| 102 | Ga0207709_10000137 | 3300025935 | Bacteria | 106203 |
| 103 | Ga0207669_10000093 | 3300025937 | Bacteria | 45459 |
| 104 | Ga0207711_10001219 | 3300025941 | Bacteria | 24358 |
| 105 | Ga0207711_10001529 | 3300025941 | Bacteria | 21453 |
| 106 | Ga0207711_10014815 | 3300025941 | Bacteria | 6478 |
| 107 | Ga0207667_10000107 | 3300025949 | Bacteria | 133066 |
| 108 | Ga0207667_10003837 | 3300025949 | Bacteria | 18472 |
| 109 | Ga0207712_10000149 | 3300025961 | Bacteria | 72521 |
| 110 | Ga0207712_10013996 | 3300025961 | Bacteria | 5148 |
| 111 | Ga0207668_10000017 | 3300025972 | Bacteria | 158934 |
| 112 | Ga0207658_10000274 | 3300025986 | Bacteria | 54007 |
| 113 | Ga0207658_10000843 | 3300025986 | Bacteria | 25627 |
| 114 | Ga0207703_10000142 | 3300026035 | Bacteria | 84567 |
| 115 | Ga0207703_10000254 | 3300026035 | Bacteria | 60234 |
| 116 | Ga0207703_10001513 | 3300026035 | Bacteria | 21176 |
| 117 | Ga0207639_10000561 | 3300026041 | Bacteria | 25544 |
| 118 | Ga0207678_10000943 | 3300026067 | Bacteria | 26547 |
| 119 | Ga0207678_10001387 | 3300026067 | Bacteria | 22297 |
| 120 | Ga0207702_10001567 | 3300026078 | Bacteria | 22645 |
| 121 | Ga0207641_10000860 | 3300026088 | Bacteria | 32063 |
| 122 | Ga0207641_10001662 | 3300026088 | Bacteria | 21693 |
| 123 | Ga0207676_10000931 | 3300026095 | Bacteria | 22647 |
| 124 | Ga0207676_10003832 | 3300026095 | Bacteria | 10625 |
| 125 | Ga0207683_10010201 | 3300026121 | Bacteria | 8011 |
| 126 | Ga0207698_10005812 | 3300026142 | Bacteria | 7660 |
| 127 | Ga0209813_10000046 | 3300027866 | Bacteria | 50246 |
| 128 | Ga0207428_10045889 | 3300027907 | Bacteria | 3516 |
| 129 | Ga0268265_10002882 | 3300028380 | Bacteria | 12634 |
| 130 | Ga0268264_10000083 | 3300028381 | Bacteria | 245366 |
| 131 | Ga0268264_10000190 | 3300028381 | Bacteria | 127747 |
| 132 | Ga0268264_10006670 | 3300028381 | Bacteria | 9710 |
| 133 | Ga0307408_100000644 | 3300031548 | Bacteria | 29299 |
| 134 | Ga0307408_100015264 | 3300031548 | Bacteria | 5114 |
| 135 | Ga0307508_10002203 | 3300031616 | Bacteria | 20787 |
| 136 | Ga0307406_10007181 | 3300031901 | Bacteria | 6171 |
| 137 | Ga0307412_10001487 | 3300031911 | Bacteria | 13027 |
| 138 | Ga0307412_10007674 | 3300031911 | Bacteria | 6128 |
| 139 | Ga0307412_10014006 | 3300031911 | Bacteria | 4721 |
| 140 | Ga0307414_10001336 | 3300032004 | Bacteria | 12755 |
| 141 | Ga0307510_10003953 | 3300033180 | Bacteria | 17371 |
| 142 | Ga0395905_0106992 | 3300037471 | Bacteria | 2626 |
| 143 | Ga0436364_1211536 | 3300037853 | Bacteria | 67143 |
| 144 | Ga0395901_0127640 | 3300038443 | Bacteria | 2673 |
| 145 | Ga0237819_01161 | 3300038705 | Bacteria | 7503 |
| 146 | Ga0400483_175050 | 3300039062 | Bacteria | 48367 |
| 147 | Ga0400483_222800 | 3300039062 | Bacteria | 244239 |
| 148 | Ga0439461_0004337 | 3300041410 | Bacteria | 2367 |
| 149 | Ga0439431_0000606 | 3300041997 | Bacteria | 7593 |
| 150 | Ga0439432_002090 | 3300042006 | Bacteria | 7544 |
| 151 | Ga0439434_0003794 | 3300042435 | Bacteria | 4417 |
| 152 | Ga0495638_0053656 | 3300046460 | Bacteria | 2509 |
| 153 | Ga0495606_0043516 | 3300046507 | Bacteria | 2994 |
| 154 | Ga0495616_0004961 | 3300046513 | Bacteria | 8306 |
| 155 | Ga0495637_0022418 | 3300046520 | Bacteria | 2880 |
| 156 | Ga0495643_0005203 | 3300046522 | Bacteria | 8863 |
| 157 | Ga0495643_0017687 | 3300046522 | Bacteria | 4161 |
| 158 | Ga0495648_0017862 | 3300046524 | Bacteria | 5054 |
| 159 | Ga0495597_0008853 | 3300046542 | Bacteria | 5022 |
| 160 | Ga0495668_0023437 | 3300046616 | Bacteria | 3521 |
| 161 | Ga0495625_0000287 | 3300046660 | Bacteria | 78023 |
| 162 | Ga0495670_0000036 | 3300046691 | Bacteria | 78512 |
| 163 | Ga0495686_0001340 | 3300047472 | Bacteria | 27560 |
| 164 | Ga0496102_0000067 | 3300048905 | Bacteria | 156790 |
| 165 | Ga0496102_0000143 | 3300048905 | Bacteria | 96813 |
| 166 | Ga0496103_0000098 | 3300048906 | Bacteria | 96109 |
| 167 | Ga0496103_0000222 | 3300048906 | Bacteria | 56372 |
| 168 | Ga0496104_0046715 | 3300048907 | Bacteria | 4079 |
| 169 | Ga0496105_0002899 | 3300048908 | Bacteria | 12584 |
| 170 | Ga0496106_0004556 | 3300048909 | Bacteria | 10273 |
| 171 | Ga0496111_0032239 | 3300048914 | Bacteria | 3735 |
| 172 | Ga0496114_0006759 | 3300048917 | Bacteria | 9035 |
| 173 | Ga0496115_0000056 | 3300048918 | Bacteria | 104434 |
| 174 | Ga0496115_0002734 | 3300048918 | Bacteria | 12667 |
| 175 | Ga0496116_0001473 | 3300048919 | Bacteria | 26338 |
| 176 | Ga0496116_0015517 | 3300048919 | Bacteria | 6017 |
| 177 | Ga0496117_0000114 | 3300048920 | Bacteria | 180658 |
| 178 | Ga0496117_0000121 | 3300048920 | Bacteria | 171532 |
| 179 | Ga0496118_0000082 | 3300048921 | Bacteria | 185820 |
| 180 | Ga0496118_0000095 | 3300048921 | Bacteria | 164850 |
| 181 | Ga0496119_0002523 | 3300048922 | Bacteria | 19954 |
| 182 | Ga0496121_0000079 | 3300048924 | Bacteria | 232653 |
| 183 | Ga0496121_0000344 | 3300048924 | Bacteria | 96865 |
| 184 | Ga0496124_0000068 | 3300048927 | Bacteria | 221819 |
| 185 | Ga0496124_0000119 | 3300048927 | Bacteria | 163996 |
| 186 | Ga0496124_0016718 | 3300048927 | Bacteria | 6958 |
| 187 | Ga0496125_0000219 | 3300048928 | Bacteria | 116721 |
| 188 | Ga0496125_0072108 | 3300048928 | Bacteria | 2694 |
| 189 | Ga0496126_0000157 | 3300048929 | Bacteria | 156203 |
| 190 | Ga0496126_0007634 | 3300048929 | Bacteria | 11805 |
| 191 | Ga0501034_0006873 | 3300049571 | Bacteria | 12166 |
| 192 | Ga0501046_0004274 | 3300049580 | Bacteria | 13008 |
| 193 | Ga0501048_0000593 | 3300049582 | Bacteria | 25683 |
| 194 | Ga0501223_000018 | 3300049663 | Bacteria | 67853 |
| 195 | Ga0501224_000002 | 3300049664 | Bacteria | 229331 |
| 196 | Ga0501233_003741 | 3300049668 | Bacteria | 2750 |
| 197 | Ga0501257_000205 | 3300049686 | Bacteria | 11799 |
| 198 | Ga0501225_0000395 | 3300049705 | Bacteria | 13775 |
| 199 | Ga0501241_003156 | 3300049758 | Bacteria | 3137 |
| 200 | Ga0501280_002671 | 3300049776 | Bacteria | 2905 |
| 201 | Ga0501044_0070911 | 3300049823 | Bacteria | 3544 |
| 202 | Ga0501226_000026 | 3300049853 | Bacteria | 91031 |
| 203 | nmdc:mga06z11_37_c1 | 3300050494 | Bacteria | 55036 |
| 204 | nmdc:mga04h51_16_c1 | 3300050495 | Bacteria | 75553 |
| 205 | nmdc:mga07m45_192_c2 | 3300050496 | Bacteria | 14743 |
| 206 | Ga0500643_000099 | 3300053087 | Bacteria | 91714 |
| 207 | Ga0500651_0005218 | 3300053093 | Bacteria | 7396 |
| 208 | Ga0500562_000777 | 3300053108 | Bacteria | 7779 |
| 209 | Ga0500618_003367 | 3300053125 | Bacteria | 5517 |
| 210 | Ga0500618_006983 | 3300053125 | Bacteria | 3262 |
| 211 | Ga0500642_0003770 | 3300053130 | Bacteria | 4639 |
| 212 | Ga0500655_000002 | 3300053133 | Bacteria | 116051 |
| 213 | Ga0500658_0002094 | 3300053134 | Bacteria | 7762 |
| 214 | Ga0500559_0003106 | 3300053136 | Bacteria | 8270 |
| 215 | Ga0500573_0000081 | 3300053140 | Bacteria | 45934 |
| 216 | Ga0500590_000013 | 3300053148 | Bacteria | 50561 |
| 217 | Ga0500590_003445 | 3300053148 | Bacteria | 7294 |
| 218 | Ga0500616_0004238 | 3300053153 | Bacteria | 10317 |
| 219 | Ga0500622_0001303 | 3300053156 | Bacteria | 20264 |
| 220 | Ga0500624_000002 | 3300053157 | Bacteria | 257900 |
| 221 | Ga0500570_000396 | 3300053724 | Bacteria | 16415 |
| 222 | Ga0500570_002944 | 3300053724 | Bacteria | 8614 |
| 223 | Ga0500645_000186 | 3300053730 | Bacteria | 48110 |
| 224 | Ga0500596_001490 | 3300053735 | Bacteria | 4742 |
| 225 | 2919713296 | 2919709256 | Bacteria | 4318106 |
| 226 | 2512642556 | 2512564014 | Bacteria | 4639632 |
| 227 | 2512645332 | 2512564014 | Bacteria | 4639632 |
| 228 | 2585260797 | 2582581305 | Bacteria | 4895574 |
| 229 | 2600200634 | 2599185354 | Bacteria | 4398675 |
| 230 | 2644125531 | 2643221622 | Bacteria | 4212502 |
| 231 | 2753763572 | 2751185897 | Bacteria | 5322941 |
| 232 | 2778125452 | 2775507255 | Bacteria | 3945731 |
| 233 | 2778126947 | 2775507255 | Bacteria | 3945731 |
| 234 | 2879165499 | 2879163058 | Bacteria | 4223965 |
| 235 | 8057101294 | 8057101203 | Bacteria | 5034064 |
| 236 | ARcpr5oldR_c000892 | |||
| 237 | JGI24739J22299_10002297 | |||
| 238 | JGI24738J21930_10000531 | |||
| 239 | JGI25165J46597_1000104 | |||
| 240 | JGI25153J46596_10000027 | |||
| 241 | JGI25153J46596_10000179 | |||
| 242 | JGI25153J46596_10005544 | |||
| 243 | Ga0055542_1000025 | |||
| 244 | Ga0055529_1000014 | |||
| 245 | Ga0055537_1001119 | |||
| 246 | Ga0055537_1001299 | |||
| 247 | Ga0055524_1000409 | |||
| 248 | Ga0055530_10000638 | |||
| 249 | Ga0055540_1002833 | |||
| 250 | Ga0055531_10000640 | |||
| 251 | Ga0055531_10006433 | |||
| 252 | Ga0065165_1001477 | |||
| 253 | Ga0065704_10071796 | |||
| 254 | Ga0070682_100000791 | |||
| 255 | Ga0070661_100010820 | |||
| 256 | Ga0070668_100000243 | |||
| 257 | Ga0070671_100000607 | |||
| 258 | Ga0070671_100036974 | |||
| 259 | Ga0070674_100005833 | |||
| 260 | Ga0070667_100000036 | |||
| 261 | Ga0070667_100000329 | |||
| 262 | Ga0070667_100001498 | |||
| 263 | Ga0070663_100001400 | |||
| 264 | Ga0070678_100000005 | |||
| 265 | Ga0070681_10091153 | |||
| 266 | Ga0068853_100000953 | |||
| 267 | Ga0070693_100024128 | |||
| 268 | Ga0068855_100000950 | |||
| 269 | Ga0070664_100039603 | |||
| 270 | Ga0068852_100064121 | |||
| 271 | Ga0068859_100025907 | |||
| 272 | Ga0068859_100035823 | |||
| 273 | Ga0068864_100001683 | |||
| 274 | Ga0068863_100003210 | |||
| 275 | Ga0068863_100073650 | |||
| 276 | Ga0068858_100000174 | |||
| 277 | Ga0068858_100002141 | |||
| 278 | Ga0068858_100003476 | |||
| 279 | Ga0068860_100000063 | |||
| 280 | Ga0068860_100000980 | |||
| 281 | Ga0068860_100011325 | |||
| 282 | Ga0075368_10000361 | |||
| 283 | Ga0075363_100023823 | |||
| 284 | Ga0075432_10001118 | |||
| 285 | Ga0075367_10000683 | |||
| 286 | Ga0075370_10000874 | |||
| 287 | Ga0097620_100025906 | |||
| 288 | Ga0097620_100035823 | |||
| 289 | Ga0105240_10000220 | |||
| 290 | Ga0105240_10051263 | |||
| 291 | Ga0105245_10001185 | |||
| 292 | Ga0105245_10025569 | |||
| 293 | Ga0105243_10000030 | |||
| 294 | Ga0105241_10013586 | |||
| 295 | Ga0105248_10001360 | |||
| 296 | Ga0105237_10000099 | |||
| 297 | Ga0105237_10017470 | |||
| 298 | Ga0105237_10033978 | |||
| 299 | Ga0105239_10000111 | |||
| 300 | Ga0157371_10000183 | |||
| 301 | Ga0157380_10016480 | |||
| 302 | Ga0213875_10000135 | |||
| 303 | Ga0209563_100030 | |||
| 304 | Ga0207425_1000005 | |||
| 305 | Ga0209148_1000011 | |||
| 306 | Ga0209233_1000164 | |||
| 307 | Ga0209565_1000007 | |||
| 308 | Ga0209565_1000231 | |||
| 309 | Ga0209455_1000006 | |||
| 310 | Ga0209673_1002158 | |||
| 311 | Ga0209025_1000515 | |||
| 312 | Ga0209564_1000619 | |||
| 313 | Ga0209758_1000002 | |||
| 314 | Ga0209758_1000007 | |||
| 315 | Ga0209758_1001588 | |||
| 316 | Ga0209050_1000001 | |||
| 317 | Ga0209050_1000010 | |||
| 318 | Ga0209050_1000483 | |||
| 319 | Ga0209050_1001456 | |||
| 320 | Ga0209256_1000008 | |||
| 321 | Ga0209051_1000999 | |||
| 322 | Ga0209257_1000027 | |||
| 323 | Ga0209257_1001497 | |||
| 324 | Ga0209257_1004551 | |||
| 325 | Ga0209257_1004735 | |||
| 326 | Ga0207699_10066373 | |||
| 327 | Ga0207705_10000752 | |||
| 328 | Ga0207654_10000621 | |||
| 329 | Ga0207695_10000213 | |||
| 330 | Ga0207695_10007339 | |||
| 331 | Ga0207671_10000918 | |||
| 332 | Ga0207650_10004626 | |||
| 333 | Ga0207687_10001970 | |||
| 334 | Ga0207700_10017035 | |||
| 335 | Ga0207644_10000119 | |||
| 336 | Ga0207644_10030767 | |||
| 337 | Ga0207709_10000137 | |||
| 338 | Ga0207669_10000093 | |||
| 339 | Ga0207711_10001219 | |||
| 340 | Ga0207711_10001529 | |||
| 341 | Ga0207711_10014815 | |||
| 342 | Ga0207667_10000107 | |||
| 343 | Ga0207667_10003837 | |||
| 344 | Ga0207712_10000149 | |||
| 345 | Ga0207712_10013996 | |||
| 346 | Ga0207668_10000017 | |||
| 347 | Ga0207658_10000274 | |||
| 348 | Ga0207658_10000843 | |||
| 349 | Ga0207703_10000142 | |||
| 350 | Ga0207703_10000254 | |||
| 351 | Ga0207703_10001513 | |||
| 352 | Ga0207639_10000561 | |||
| 353 | Ga0207678_10000943 | |||
| 354 | Ga0207678_10001387 | |||
| 355 | Ga0207702_10001567 | |||
| 356 | Ga0207641_10000860 | |||
| 357 | Ga0207641_10001662 | |||
| 358 | Ga0207676_10000931 | |||
| 359 | Ga0207676_10003832 | |||
| 360 | Ga0207683_10010201 | |||
| 361 | Ga0207698_10005812 | |||
| 362 | Ga0209813_10000046 | |||
| 363 | Ga0207428_10045889 | |||
| 364 | Ga0268265_10002882 | |||
| 365 | Ga0268264_10000083 | |||
| 366 | Ga0268264_10000190 | |||
| 367 | Ga0268264_10006670 | |||
| 368 | Ga0307408_100000644 | |||
| 369 | Ga0307408_100015264 | |||
| 370 | Ga0307508_10002203 | |||
| 371 | Ga0307406_10007181 | |||
| 372 | Ga0307412_10001487 | |||
| 373 | Ga0307412_10007674 | |||
| 374 | Ga0307412_10014006 | |||
| 375 | Ga0307414_10001336 | |||
| 376 | Ga0307510_10003953 | |||
| 377 | Ga0395905_0106992 | |||
| 378 | Ga0436364_1211536 | |||
| 379 | Ga0395901_0127640 | |||
| 380 | Ga0237819_01161 | |||
| 381 | Ga0400483_175050 | |||
| 382 | Ga0400483_222800 | |||
| 383 | Ga0439461_0004337 | |||
| 384 | Ga0439431_0000606 | |||
| 385 | Ga0439432_002090 | |||
| 386 | Ga0439434_0003794 | |||
| 387 | Ga0495638_0053656 | |||
| 388 | Ga0495606_0043516 | |||
| 389 | Ga0495616_0004961 | |||
| 390 | Ga0495637_0022418 | |||
| 391 | Ga0495643_0005203 | |||
| 392 | Ga0495643_0017687 | |||
| 393 | Ga0495648_0017862 | |||
| 394 | Ga0495597_0008853 | |||
| 395 | Ga0495668_0023437 | |||
| 396 | Ga0495625_0000287 | |||
| 397 | Ga0495670_0000036 | |||
| 398 | Ga0495686_0001340 | |||
| 399 | Ga0496102_0000067 | |||
| 400 | Ga0496102_0000143 | |||
| 401 | Ga0496103_0000098 | |||
| 402 | Ga0496103_0000222 | |||
| 403 | Ga0496104_0046715 | |||
| 404 | Ga0496105_0002899 | |||
| 405 | Ga0496106_0004556 | |||
| 406 | Ga0496111_0032239 | |||
| 407 | Ga0496114_0006759 | |||
| 408 | Ga0496115_0000056 | |||
| 409 | Ga0496115_0002734 | |||
| 410 | Ga0496116_0001473 | |||
| 411 | Ga0496116_0015517 | |||
| 412 | Ga0496117_0000114 | |||
| 413 | Ga0496117_0000121 | |||
| 414 | Ga0496118_0000082 | |||
| 415 | Ga0496118_0000095 | |||
| 416 | Ga0496119_0002523 | |||
| 417 | Ga0496121_0000079 | |||
| 418 | Ga0496121_0000344 | |||
| 419 | Ga0496124_0000068 | |||
| 420 | Ga0496124_0000119 | |||
| 421 | Ga0496124_0016718 | |||
| 422 | Ga0496125_0000219 | |||
| 423 | Ga0496125_0072108 | |||
| 424 | Ga0496126_0000157 | |||
| 425 | Ga0496126_0007634 | |||
| 426 | Ga0501034_0006873 | |||
| 427 | Ga0501046_0004274 | |||
| 428 | Ga0501048_0000593 | |||
| 429 | Ga0501223_000018 | |||
| 430 | Ga0501224_000002 | |||
| 431 | Ga0501233_003741 | |||
| 432 | Ga0501257_000205 | |||
| 433 | Ga0501225_0000395 | |||
| 434 | Ga0501241_003156 | |||
| 435 | Ga0501280_002671 | |||
| 436 | Ga0501044_0070911 | |||
| 437 | Ga0501226_000026 | |||
| 438 | nmdc:mga06z11_37_c1 | |||
| 439 | nmdc:mga04h51_16_c1 | |||
| 440 | nmdc:mga07m45_192_c2 | |||
| 441 | Ga0500643_000099 | |||
| 442 | Ga0500651_0005218 | |||
| 443 | Ga0500562_000777 | |||
| 444 | Ga0500618_003367 | |||
| 445 | Ga0500618_006983 | |||
| 446 | Ga0500642_0003770 | |||
| 447 | Ga0500655_000002 | |||
| 448 | Ga0500658_0002094 | |||
| 449 | Ga0500559_0003106 | |||
| 450 | Ga0500573_0000081 | |||
| 451 | Ga0500590_000013 | |||
| 452 | Ga0500590_003445 | |||
| 453 | Ga0500616_0004238 | |||
| 454 | Ga0500622_0001303 | |||
| 455 | Ga0500624_000002 | |||
| 456 | Ga0500570_000396 | |||
| 457 | Ga0500570_002944 | |||
| 458 | Ga0500645_000186 | |||
| 459 | Ga0500596_001490 | |||
| 460 | 2919713296 | |||
| 461 | 2512642556 | |||
| 462 | 2512645332 | |||
| 463 | 2585260797 | |||
| 464 | 2600200634 | |||
| 465 | 2644125531 | |||
| 466 | 2753763572 | |||
| 467 | 2778125452 | |||
| 468 | 2778126947 | |||
| 469 | 2879165499 | |||
| 470 | 8057101294 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5vpv-assembly3.cif.gz_C | crystal structure of apo cryptococcus neoformans h99 acetyl-coa synthetase with an acetylated active site lysine | 0.9739 | 5 | 514 |
| 7knp-assembly1.cif.gz_C | crystal structure of acetyl-coa synthetase in complex with adenosine-5'-butylphosphate from cryptococcus neoformans var. grubii serotype a (h99) | 0.9724 | 16 | 512 |
| 8g0u-assembly1.cif.gz_C | crystal structure of acetyl-coa synthetase in complex with an isopropyl ester amp inhibitor from cryptococcus neoformans h99 | 0.97 | 22 | 512 |
| 7kdn-assembly3.cif.gz_C | crystal structure of acetyl-coa synthetase in complex with adenosine-5'-propylphosphate from aspergillus fumigatus | 0.9678 | 5 | 514 |
| 8v5g-assembly1.cif.gz_C | crystal structure of acetyl-coa synthetase from cryptococcus neoformans h99 in complex with an ethylsulfamide amp inhibitor | 0.9658 | 16 | 511 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1nnmA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9836 | 5 | 516 | 3.40.50.12780 |
| 1nnmA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9798 | 5 | 516 | 3.40.50.12780 |
| 5ifiC01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9723 | 16 | 516 | 3.40.50.12780 |
| af_F1QQH3_177_548_3.40.50.12780 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9711 | 164 | 516 | 3.40.50.12780 |
| af_C6KTB4_488_811_3.40.50.12780 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9684 | 220 | 516 | 3.40.50.12780 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3E0QB81-F1-model_v4 | Acetate--CoA ligase (EC 6.2.1.1) | 0.9895 | 5 | 499 |
GO:0003987
GO:0005829 GO:0016020 GO:0016208 GO:0019427 |
| AF-A0A3E0QB81-F1-model_v4 | Acetate--CoA ligase (EC 6.2.1.1) | 0.9875 | 5 | 499 |
GO:0003987
GO:0005829 GO:0016020 GO:0016208 GO:0019427 |
| AF-Q4PJ50-F1-model_v4 | Predicted acetyl-CoA synthase | 0.9842 | 172 | 470 |
GO:0003987
GO:0005829 GO:0006085 |
| AF-A0A7X6VVR9-F1-model_v4 | Acetate--CoA ligase (EC 6.2.1.1) | 0.9837 | 17 | 497 |
GO:0003987
GO:0016208 GO:0019427 |
| AF-A0A2X2V4B8-F1-model_v4 | Acetyl-CoA synthetase (EC 6.2.1.1) | 0.9813 | 115 | 330 |
GO:0003987
GO:0005829 GO:0006085 |