F348783

General Info

Members Datasets Scaffolds Average Seq Length
236 180 472 317

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100318535|Ga0070670_1003185351
Length 364
Sequence MSVRQVAHRYLLHRYAAVNSSAHIAIPLSRKADVRDFSPPFRLFFSRIRIQMQTTEAIFVAGHRGLAGGAILREYQRAGYEHLLTRTHSDLDLAERAAVREFFADARPGVVVLAAAKVGGIKANNDYPVEFLLENLKIQNNIIEAAADFGTRKLLFLGSSCIYPKFAPQPIPENALLTSALEPTNEAYALAKIAGIKLCQAYARQYGKKFICAMPTNLYGPGDNFDLNNSHVLPALLRKVHEARLAGAQEVVVWGTGTPRREFLHVDDLAGACRFLLENYSDPEIVNVGFGEDVTIRELAETICDVIGFEGKLVFDPTKPDGTPRKLLDSSRLLGLGWKPRIPLREGIAATYDWYQKTVGASGE

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
98 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
99 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
102 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
113 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
114 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
115 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
116 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
117 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
130 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
131 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
132 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
137 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
164 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
165 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
166 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
167 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
168 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
169 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
170 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
171 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
174 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
175 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
176 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
177 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
178 2751185800 Brucella pituitosa AA2 Isolate Unclassified
179 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
180 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.31
Metatranscriptomes 0
Isolates 1.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.59
Nodule 0.42
Rhizoplane 2.12
Rhizosphere 77.54
Stem 0
Stem Tuber 0
Unclassified 0.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100318535 3300005331 Bacteria 1362
2 Ga0055538_1000186 3300003751 Bacteria 38030
3 Ga0065704_10125496 3300005289 Bacteria 1702
4 Ga0070658_10000771 3300005327 Bacteria 27511
5 Ga0070658_10003705 3300005327 Bacteria 12499
6 Ga0070658_10003847 3300005327 Bacteria 12304
7 Ga0070683_100494150 3300005329 Bacteria 1169
8 Ga0070690_100106001 3300005330 Bacteria 1869
9 Ga0070670_100124962 3300005331 Bacteria 2220
10 Ga0070666_10001632 3300005335 Bacteria 13650
11 Ga0068868_100016631 3300005338 Bacteria 5469
12 Ga0070660_100197692 3300005339 Bacteria 1630
13 Ga0070689_100041360 3300005340 Bacteria 3538
14 Ga0070689_100075355 3300005340 Bacteria 2642
15 Ga0070675_100157925 3300005354 Bacteria 1948
16 Ga0070671_100025118 3300005355 Bacteria 4885
17 Ga0070667_100016999 3300005367 Bacteria 6022
18 Ga0070713_100011191 3300005436 Bacteria 6524
19 Ga0070710_10041989 3300005437 Bacteria 2527
20 Ga0070711_100028199 3300005439 Bacteria 3693
21 Ga0070662_100019442 3300005457 Bacteria 4610
22 Ga0070706_100538346 3300005467 Bacteria 1086
23 Ga0068853_100000112 3300005539 Bacteria 55481
24 Ga0070672_100001152 3300005543 Bacteria 16164
25 Ga0070665_100101853 3300005548 Bacteria 2876
26 Ga0068855_100055984 3300005563 Bacteria 4629
27 Ga0068855_100061834 3300005563 Bacteria 4374
28 Ga0068855_100103015 3300005563 Bacteria 3284
29 Ga0068855_100522043 3300005563 Bacteria 1288
30 Ga0068857_100000025 3300005577 Bacteria 84312
31 Ga0068856_100030479 3300005614 Bacteria 5272
32 Ga0068856_100040710 3300005614 Bacteria 4564
33 Ga0068852_100000189 3300005616 Bacteria 41648
34 Ga0068852_100098349 3300005616 Bacteria 2635
35 Ga0068859_100154980 3300005617 Bacteria 2368
36 Ga0068859_100386962 3300005617 Bacteria 1494
37 Ga0068851_10000001 3300005834 Bacteria 495512
38 Ga0068863_100045550 3300005841 Bacteria 4162
39 Ga0068863_100100305 3300005841 Bacteria 2752
40 Ga0068858_100012895 3300005842 Bacteria 7882
41 Ga0068858_100020151 3300005842 Bacteria 6236
42 Ga0068858_100086451 3300005842 Bacteria 2917
43 Ga0068860_100002409 3300005843 Bacteria 19620
44 Ga0068862_100187667 3300005844 Bacteria 1859
45 Ga0081455_10000257 3300005937 Bacteria 69896
46 Ga0081455_10134654 3300005937 Bacteria 1927
47 Ga0081455_10137843 3300005937 Bacteria 1898
48 Ga0081540_1000072 3300005983 Bacteria 109383
49 Ga0070717_10056318 3300006028 Bacteria 3247
50 Ga0070717_10086160 3300006028 Bacteria 2644
51 Ga0070717_10233541 3300006028 Bacteria 1620
52 Ga0070712_100030438 3300006175 Bacteria 3626
53 Ga0075362_10000023 3300006177 Bacteria 60275
54 Ga0075367_10076839 3300006178 Bacteria 2015
55 Ga0075369_10008399 3300006186 Bacteria 3970
56 Ga0075366_10000034 3300006195 Bacteria 47623
57 Ga0097621_100010906 3300006237 Bacteria 6671
58 Ga0075370_10000009 3300006353 Bacteria 97850
59 Ga0068871_100032487 3300006358 Bacteria 4124
60 Ga0068871_100110738 3300006358 Bacteria 2309
61 Ga0068871_100355838 3300006358 Bacteria 1296
62 Ga0075428_100000898 3300006844 Bacteria 31384
63 Ga0075428_100169704 3300006844 Bacteria 2366
64 Ga0075430_100258364 3300006846 Bacteria 1443
65 Ga0075430_100272910 3300006846 Bacteria 1400
66 Ga0075431_100083007 3300006847 Bacteria 3308
67 Ga0075429_100034240 3300006880 Bacteria 4413
68 Ga0068865_100014585 3300006881 Bacteria 4997
69 Ga0097620_100154982 3300006931 Bacteria 2368
70 Ga0097620_100386994 3300006931 Bacteria 1494
71 Ga0099795_10012632 3300007788 Bacteria 2567
72 Ga0105240_10000112 3300009093 Bacteria 169461
73 Ga0105240_10047435 3300009093 Bacteria 5436
74 Ga0105240_10049175 3300009093 Bacteria 5323
75 Ga0105245_10043230 3300009098 Bacteria 4019
76 Ga0114129_10006562 3300009147 Bacteria 16511
77 Ga0114129_10392105 3300009147 Bacteria 1831
78 Ga0105242_10081279 3300009176 Bacteria 2710
79 Ga0105248_10049536 3300009177 Bacteria 4712
80 Ga0105237_10000217 3300009545 Bacteria 80966
81 Ga0105237_10003374 3300009545 Bacteria 19005
82 Ga0105237_10066512 3300009545 Bacteria 3599
83 Ga0105238_10001177 3300009551 Bacteria 26305
84 Ga0105238_10224575 3300009551 Bacteria 1855
85 Ga0105239_10001868 3300010375 Bacteria 27566
86 Ga0105239_10076660 3300010375 Bacteria 3677
87 Ga0105239_10131349 3300010375 Bacteria 2786
88 Ga0157374_10000030 3300013296 Bacteria 211102
89 Ga0157378_10057026 3300013297 Bacteria 3481
90 Ga0163162_10103915 3300013306 Bacteria 2935
91 Ga0163163_10003808 3300014325 Bacteria 12850
92 Ga0163163_10004647 3300014325 Bacteria 11735
93 Ga0157376_10004461 3300014969 Bacteria 9753
94 Ga0157376_10106367 3300014969 Bacteria 2461
95 Ga0163161_10137811 3300017792 Bacteria 1846
96 Ga0213874_10015052 3300021377 Bacteria 2033
97 Ga0213876_10000780 3300021384 Bacteria 21722
98 Ga0209784_100210 3300025224 Bacteria 40823
99 Ga0209050_1003019 3300025298 Bacteria 13040
100 Ga0207656_10000002 3300025321 Bacteria 792178
101 Ga0207692_10003982 3300025898 Bacteria 5804
102 Ga0207699_10056955 3300025906 Bacteria 2333
103 Ga0207705_10009555 3300025909 Bacteria 7055
104 Ga0207705_10110235 3300025909 Bacteria 2033
105 Ga0207684_10461610 3300025910 Bacteria 1090
106 Ga0207695_10000196 3300025913 Bacteria 171024
107 Ga0207695_10000983 3300025913 Bacteria 50658
108 Ga0207695_10156911 3300025913 Bacteria 2210
109 Ga0207671_10000002 3300025914 Bacteria 1144816
110 Ga0207671_10009690 3300025914 Bacteria 8022
111 Ga0207671_10074371 3300025914 Bacteria 2539
112 Ga0207693_10025105 3300025915 Bacteria 4728
113 Ga0207693_10025412 3300025915 Unclassified 4696
114 Ga0207663_10161663 3300025916 Bacteria 1581
115 Ga0207657_10176207 3300025919 Bacteria 1730
116 Ga0207694_10000022 3300025924 Bacteria 288900
117 Ga0207650_10156101 3300025925 Bacteria 1805
118 Ga0207659_10053071 3300025926 Bacteria 2891
119 Ga0207700_10097681 3300025928 Bacteria 2334
120 Ga0207644_10020314 3300025931 Bacteria 4516
121 Ga0207706_10015753 3300025933 Bacteria 6833
122 Ga0207704_10014063 3300025938 Bacteria 4030
123 Ga0207665_10027907 3300025939 Bacteria 3728
124 Ga0207691_10020202 3300025940 Bacteria 6299
125 Ga0207667_10032953 3300025949 Bacteria 5576
126 Ga0207667_10045613 3300025949 Bacteria 4641
127 Ga0207703_10004087 3300026035 Bacteria 12038
128 Ga0207639_10000128 3300026041 Bacteria 55518
129 Ga0207702_10024069 3300026078 Bacteria 5053
130 Ga0207702_10152069 3300026078 Bacteria 2106
131 Ga0207641_10023892 3300026088 Bacteria 5039
132 Ga0207674_10000153 3300026116 Bacteria 80955
133 Ga0207698_10000063 3300026142 Bacteria 72803
134 Ga0207428_10041295 3300027907 Bacteria 3735
135 Ga0268266_10207485 3300028379 Bacteria 1796
136 Ga0268264_10003525 3300028381 Bacteria 13479
137 Ga0268264_10392397 3300028381 Bacteria 1332
138 Ga0265334_10003549 3300028573 Bacteria 7070
139 Ga0307517_10006513 3300028786 Bacteria 17275
140 Ga0265338_10016616 3300028800 Bacteria 7986
141 Ga0307408_100294215 3300031548 Bacteria 1357
142 Ga0307508_10003238 3300031616 Bacteria 16644
143 Ga0265314_10022607 3300031711 Bacteria 4816
144 Ga0316576_10023806 3300031727 Bacteria 4271
145 Ga0307405_10031331 3300031731 Bacteria 3129
146 Ga0307413_10123978 3300031824 Bacteria 1755
147 Ga0307410_10017861 3300031852 Bacteria 4271
148 Ga0307406_10008797 3300031901 Bacteria 5643
149 Ga0307409_100025308 3300031995 Bacteria 4159
150 Ga0307416_100033586 3300032002 Bacteria 3891
151 Ga0307414_10001174 3300032004 Bacteria 13449
152 Ga0307414_10134100 3300032004 Bacteria 1927
153 Ga0307411_10004116 3300032005 Bacteria 6900
154 Ga0307411_10014649 3300032005 Bacteria 4372
155 Ga0307415_100537749 3300032126 Bacteria 1029
156 Ga0316580_10026597 3300032139 Bacteria 1789
157 Ga0373948_0004954 3300034817 Bacteria 2134
158 Ga0373932_0046310 3300035112 Bacteria 1275
159 Ga0316574_0008894 3300035398 Bacteria 5603
160 Ga0373931_0024355 3300035691 Bacteria 3066
161 Ga0395898_0443148 3300037466 Bacteria 1237
162 Ga0436364_0397475 3300037853 Bacteria 5012
163 Ga0436365_1225211 3300039437 Bacteria 28469
164 Ga0436360_1098000 3300039438 Bacteria 6264
165 Ga0436363_1048924 3300039450 Bacteria 2239
166 Ga0451577_0003384 3300042876 Bacteria 17845
167 Ga0453683_0000006 3300044673 Bacteria 586638
168 Ga0453684_0010856 3300044712 Bacteria 15432
169 Ga0451576_0000642 3300045051 Bacteria 72433
170 Ga0451576_0064717 3300045051 Viruses 3808
171 Ga0451576_0431952 3300045051 Bacteria 1382
172 Ga0495592_0052682 3300046454 Bacteria 3021
173 Ga0495610_0006223 3300046512 Bacteria 8278
174 Ga0495643_0000222 3300046522 Bacteria 87312
175 Ga0495643_0000662 3300046522 Bacteria 40568
176 Ga0495640_0278798 3300046533 Bacteria 1041
177 Ga0495611_0012165 3300046648 Bacteria 3658
178 Ga0495670_0000893 3300046691 Bacteria 14421
179 Ga0495660_0016470 3300046810 Bacteria 4262
180 Ga0495604_0024562 3300047317 Bacteria 4808
181 Ga0495683_0067755 3300047323 Bacteria 1757
182 Ga0495685_000129 3300047447 Bacteria 26024
183 Ga0495681_0000194 3300047470 Bacteria 51439
184 Ga0495686_0017636 3300047472 Bacteria 4803
185 Ga0496104_0047510 3300048907 Bacteria 4045
186 Ga0496105_0012102 3300048908 Bacteria 6832
187 Ga0496109_0002899 3300048912 Bacteria 14331
188 Ga0496112_0180507 3300048915 Bacteria 2075
189 Ga0496114_0350151 3300048917 Bacteria 1306
190 Ga0496116_0001354 3300048919 Bacteria 27773
191 Ga0496119_0018368 3300048922 Bacteria 5208
192 Ga0496121_0141399 3300048924 Bacteria 1785
193 Ga0496121_0184744 3300048924 Bacteria 1501
194 Ga0496122_0003980 3300048925 Bacteria 18844
195 Ga0496122_0022506 3300048925 Bacteria 5599
196 Ga0496123_0012943 3300048926 Bacteria 7054
197 Ga0496124_0186628 3300048927 Bacteria 1591
198 Ga0496125_0000017 3300048928 Bacteria 508217
199 Ga0496125_0000774 3300048928 Bacteria 52227
200 Ga0496125_0002731 3300048928 Bacteria 22382
201 Ga0496125_0082002 3300048928 Bacteria 2461
202 Ga0496125_0134974 3300048928 Bacteria 1728
203 Ga0496126_0284566 3300048929 Bacteria 1369
204 Ga0501034_0033077 3300049571 Bacteria 5250
205 Ga0501080_0005090 3300049742 Bacteria 11715
206 nmdc:mga03683_188_c1 3300050489 Bacteria 20373
207 nmdc:mga0k408_3_c1 3300050493 Bacteria 243777
208 nmdc:mga06z11_38993_c1 3300050494 Bacteria 2362
209 nmdc:mga07m45_6_c1 3300050496 Bacteria 260521
210 nmdc:mga05p37_214164_c1 3300050507 Bacteria 2327
211 nmdc:mga05p37_322_c2 3300050507 Bacteria 7324
212 nmdc:mga09592_137431_c1 3300050508 Bacteria 2105
213 nmdc:mga0qj67_244259_c1 3300050509 Bacteria 1456
214 nmdc:mga0qj67_397801_c1 3300050509 Bacteria 1112
215 nmdc:mga06r32_291688_c1 3300050510 Bacteria 1618
216 nmdc:mga08y16_86693_c1 3300050511 Bacteria 3263
217 nmdc:mga0sz30_8931_c1 3300050516 Bacteria 3799
218 Ga0495601_0148274 3300053077 Bacteria 1531
219 Ga0495619_0018662 3300053085 Bacteria 4402
220 Ga0495619_0041810 3300053085 Bacteria 2999
221 Ga0500578_0003522 3300053086 Bacteria 11681
222 Ga0500569_000638 3300053109 Bacteria 5987
223 Ga0500652_001048 3300053131 Bacteria 8987
224 Ga0500658_0012561 3300053134 Bacteria 3125
225 Ga0500579_048789 3300053143 Bacteria 2603
226 Ga0500600_0000247 3300053149 Bacteria 21891
227 Ga0500616_0001751 3300053153 Bacteria 19900
228 Ga0500616_0003383 3300053153 Bacteria 12244
229 Ga0500620_000435 3300053155 Bacteria 7577
230 Ga0500622_0043828 3300053156 Bacteria 2319
231 Ga0500656_001185 3300053732 Bacteria 2193
232 Ga0500587_000301 3300053739 Bacteria 5534
233 2585847934 2585427594 Bacteria 6180594
234 2753360945 2751185800 Bacteria 5467370
235 2758637773 2758568016 Bacteria 5645291
236 2937827774 2937822353 Bacteria 7290551
237 Ga0070670_100318535
238 Ga0055538_1000186
239 Ga0065704_10125496
240 Ga0070658_10000771
241 Ga0070658_10003705
242 Ga0070658_10003847
243 Ga0070683_100494150
244 Ga0070690_100106001
245 Ga0070670_100124962
246 Ga0070666_10001632
247 Ga0068868_100016631
248 Ga0070660_100197692
249 Ga0070689_100041360
250 Ga0070689_100075355
251 Ga0070675_100157925
252 Ga0070671_100025118
253 Ga0070667_100016999
254 Ga0070713_100011191
255 Ga0070710_10041989
256 Ga0070711_100028199
257 Ga0070662_100019442
258 Ga0070706_100538346
259 Ga0068853_100000112
260 Ga0070672_100001152
261 Ga0070665_100101853
262 Ga0068855_100055984
263 Ga0068855_100061834
264 Ga0068855_100103015
265 Ga0068855_100522043
266 Ga0068857_100000025
267 Ga0068856_100030479
268 Ga0068856_100040710
269 Ga0068852_100000189
270 Ga0068852_100098349
271 Ga0068859_100154980
272 Ga0068859_100386962
273 Ga0068851_10000001
274 Ga0068863_100045550
275 Ga0068863_100100305
276 Ga0068858_100012895
277 Ga0068858_100020151
278 Ga0068858_100086451
279 Ga0068860_100002409
280 Ga0068862_100187667
281 Ga0081455_10000257
282 Ga0081455_10134654
283 Ga0081455_10137843
284 Ga0081540_1000072
285 Ga0070717_10056318
286 Ga0070717_10086160
287 Ga0070717_10233541
288 Ga0070712_100030438
289 Ga0075362_10000023
290 Ga0075367_10076839
291 Ga0075369_10008399
292 Ga0075366_10000034
293 Ga0097621_100010906
294 Ga0075370_10000009
295 Ga0068871_100032487
296 Ga0068871_100110738
297 Ga0068871_100355838
298 Ga0075428_100000898
299 Ga0075428_100169704
300 Ga0075430_100258364
301 Ga0075430_100272910
302 Ga0075431_100083007
303 Ga0075429_100034240
304 Ga0068865_100014585
305 Ga0097620_100154982
306 Ga0097620_100386994
307 Ga0099795_10012632
308 Ga0105240_10000112
309 Ga0105240_10047435
310 Ga0105240_10049175
311 Ga0105245_10043230
312 Ga0114129_10006562
313 Ga0114129_10392105
314 Ga0105242_10081279
315 Ga0105248_10049536
316 Ga0105237_10000217
317 Ga0105237_10003374
318 Ga0105237_10066512
319 Ga0105238_10001177
320 Ga0105238_10224575
321 Ga0105239_10001868
322 Ga0105239_10076660
323 Ga0105239_10131349
324 Ga0157374_10000030
325 Ga0157378_10057026
326 Ga0163162_10103915
327 Ga0163163_10003808
328 Ga0163163_10004647
329 Ga0157376_10004461
330 Ga0157376_10106367
331 Ga0163161_10137811
332 Ga0213874_10015052
333 Ga0213876_10000780
334 Ga0209784_100210
335 Ga0209050_1003019
336 Ga0207656_10000002
337 Ga0207692_10003982
338 Ga0207699_10056955
339 Ga0207705_10009555
340 Ga0207705_10110235
341 Ga0207684_10461610
342 Ga0207695_10000196
343 Ga0207695_10000983
344 Ga0207695_10156911
345 Ga0207671_10000002
346 Ga0207671_10009690
347 Ga0207671_10074371
348 Ga0207693_10025105
349 Ga0207693_10025412
350 Ga0207663_10161663
351 Ga0207657_10176207
352 Ga0207694_10000022
353 Ga0207650_10156101
354 Ga0207659_10053071
355 Ga0207700_10097681
356 Ga0207644_10020314
357 Ga0207706_10015753
358 Ga0207704_10014063
359 Ga0207665_10027907
360 Ga0207691_10020202
361 Ga0207667_10032953
362 Ga0207667_10045613
363 Ga0207703_10004087
364 Ga0207639_10000128
365 Ga0207702_10024069
366 Ga0207702_10152069
367 Ga0207641_10023892
368 Ga0207674_10000153
369 Ga0207698_10000063
370 Ga0207428_10041295
371 Ga0268266_10207485
372 Ga0268264_10003525
373 Ga0268264_10392397
374 Ga0265334_10003549
375 Ga0307517_10006513
376 Ga0265338_10016616
377 Ga0307408_100294215
378 Ga0307508_10003238
379 Ga0265314_10022607
380 Ga0316576_10023806
381 Ga0307405_10031331
382 Ga0307413_10123978
383 Ga0307410_10017861
384 Ga0307406_10008797
385 Ga0307409_100025308
386 Ga0307416_100033586
387 Ga0307414_10001174
388 Ga0307414_10134100
389 Ga0307411_10004116
390 Ga0307411_10014649
391 Ga0307415_100537749
392 Ga0316580_10026597
393 Ga0373948_0004954
394 Ga0373932_0046310
395 Ga0316574_0008894
396 Ga0373931_0024355
397 Ga0395898_0443148
398 Ga0436364_0397475
399 Ga0436365_1225211
400 Ga0436360_1098000
401 Ga0436363_1048924
402 Ga0451577_0003384
403 Ga0453683_0000006
404 Ga0453684_0010856
405 Ga0451576_0000642
406 Ga0451576_0064717
407 Ga0451576_0431952
408 Ga0495592_0052682
409 Ga0495610_0006223
410 Ga0495643_0000222
411 Ga0495643_0000662
412 Ga0495640_0278798
413 Ga0495611_0012165
414 Ga0495670_0000893
415 Ga0495660_0016470
416 Ga0495604_0024562
417 Ga0495683_0067755
418 Ga0495685_000129
419 Ga0495681_0000194
420 Ga0495686_0017636
421 Ga0496104_0047510
422 Ga0496105_0012102
423 Ga0496109_0002899
424 Ga0496112_0180507
425 Ga0496114_0350151
426 Ga0496116_0001354
427 Ga0496119_0018368
428 Ga0496121_0141399
429 Ga0496121_0184744
430 Ga0496122_0003980
431 Ga0496122_0022506
432 Ga0496123_0012943
433 Ga0496124_0186628
434 Ga0496125_0000017
435 Ga0496125_0000774
436 Ga0496125_0002731
437 Ga0496125_0082002
438 Ga0496125_0134974
439 Ga0496126_0284566
440 Ga0501034_0033077
441 Ga0501080_0005090
442 nmdc:mga03683_188_c1
443 nmdc:mga0k408_3_c1
444 nmdc:mga06z11_38993_c1
445 nmdc:mga07m45_6_c1
446 nmdc:mga05p37_214164_c1
447 nmdc:mga05p37_322_c2
448 nmdc:mga09592_137431_c1
449 nmdc:mga0qj67_244259_c1
450 nmdc:mga0qj67_397801_c1
451 nmdc:mga06r32_291688_c1
452 nmdc:mga08y16_86693_c1
453 nmdc:mga0sz30_8931_c1
454 Ga0495601_0148274
455 Ga0495619_0018662
456 Ga0495619_0041810
457 Ga0500578_0003522
458 Ga0500569_000638
459 Ga0500652_001048
460 Ga0500658_0012561
461 Ga0500579_048789
462 Ga0500600_0000247
463 Ga0500616_0001751
464 Ga0500616_0003383
465 Ga0500620_000435
466 Ga0500622_0043828
467 Ga0500656_001185
468 Ga0500587_000301
469 2585847934
470 2753360945
471 2758637773
472 2937827774

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

58

289

0.96

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

72

351

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
1e6u-assembly1.cif.gz_A-2 gdp 4-keto-6-deoxy-d-mannose epimerase reductase 0.976 4 308
1e7q-assembly1.cif.gz_A-2 gdp 4-keto-6-deoxy-d-mannose epimerase reductase s107a 0.9753 4 308
1e7r-assembly1.cif.gz_A-2 gdp 4-keto-6-deoxy-d-mannose epimerase reductase y136e 0.9744 4 308
1bsv-assembly1.cif.gz_A gdp-fucose synthetase from escherichia coli complex with nadph 0.9688 4 310
1e7s-assembly1.cif.gz_A-2 gdp 4-keto-6-deoxy-d-mannose epimerase reductase k140r 0.9678 4 308
ID Description Score Start End Superfamily
1bwsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9292 4 291 3.40.50.720
1e6uA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9266 169 308 3.90.25.10
1bwsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9251 4 291 3.40.50.720
1e6uA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9172 169 308 3.90.25.10
6aqzD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9082 1 237 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q3TSA3-F1-model_v4 deleted 0.9993 1 161
AF-A0A2A4Q680-F1-model_v4 GDP-fucose synthetase 0.999 1 139 GO:0050577
AF-A0A2M7R8L0-F1-model_v4 GDP-fucose synthetase 0.9989 1 157 GO:0050577
AF-A0A356R231-F1-model_v4 GDP-fucose synthetase 0.9973 1 149 GO:0050577
AF-A0A731UXI0-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9971 56 156 GO:0050577

Map