F349274

General Info

Members Datasets Scaffolds Average Seq Length
236 188 221 264

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_076839|Ga0400483_076839_61_999
Length 312
Sequence MIREPCQRTPRARLAALKTPEGPLMGGREAGISNMSPGSNSHFGSPAASETITIWQVDSFTRVPFSGNPAGVCVLSEARSEEWMQNVALEMALSETAFVQAADDGWDLRWFTPATEVKLCGHATLASAHVLWSEGLVAPEQTISFHTLSGVLTAARQDQLIELDFPARPPQPVTPPPGLCEALAVTPELVARDQEDYLVLIADAATLRGIAPDIRGLAQVEARGIIVTAAAEDPAHDFVSRFFAPAVGVDEDPVTGSAHCCLAPFWGERLGKTEMAGYQASARGGTVRVRLAGNRVVLGGHAVTTLRGDLLV

Samples

Sample ID Description Type Environment
1 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
2 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
3 2831426010 Nostoc sp. 106C Isolate Unclassified
4 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
5 2849660919 Nostoc sp. T09 Isolate Unclassified
6 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
7 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
8 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
9 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
10 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
11 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
12 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
13 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
14 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
97 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
100 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
101 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
104 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
107 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
110 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
116 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
117 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
120 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
127 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
128 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
129 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
139 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
140 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
141 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
142 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
153 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
154 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
155 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
164 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
165 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
166 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
167 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
168 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
169 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
182 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
183 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
186 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified
187 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
188 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.95
Metatranscriptomes 1.69
Isolates 6.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.54
Nodule 0
Rhizoplane 0.42
Rhizosphere 84.75
Stem 0
Stem Tuber 0
Unclassified 12.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10001950 3300001979 Bacteria 9445
2 JGI25154J39366_1000003 3300002738 Bacteria 397627
3 rootH2_10027898 3300003320 Bacteria 4866
4 JGI25160J50197_1009585 3300003354 Bacteria 3575
5 Ga0065715_10002487 3300005293 Bacteria 4956
6 Ga0070690_100488402 3300005330 Bacteria 919
7 Ga0070660_100004797 3300005339 Bacteria 9350
8 Ga0070668_100064672 3300005347 Bacteria 2836
9 Ga0070671_100090555 3300005355 Bacteria 2561
10 Ga0070709_10000056 3300005434 Bacteria 88178
11 Ga0070713_100004122 3300005436 Bacteria 9690
12 Ga0070708_100007858 3300005445 Bacteria 8540
13 Ga0070681_10536342 3300005458 Bacteria 1084
14 Ga0070706_100005945 3300005467 Bacteria 11540
15 Ga0070706_100010782 3300005467 Bacteria 8481
16 Ga0070706_100335236 3300005467 Bacteria 1410
17 Ga0070698_100000183 3300005471 Bacteria 59252
18 Ga0070699_100004482 3300005518 Bacteria 12354
19 Ga0070699_100406198 3300005518 Bacteria 1232
20 Ga0070697_100010717 3300005536 Bacteria 7156
21 Ga0070697_100052168 3300005536 Bacteria 3323
22 Ga0070697_100233364 3300005536 Bacteria 1570
23 Ga0070686_100371612 3300005544 Bacteria 1080
24 Ga0070693_100076455 3300005547 Bacteria 1984
25 Ga0070665_100240537 3300005548 Bacteria 1811
26 Ga0068854_100033487 3300005578 Unclassified 3583
27 Ga0068852_100103443 3300005616 Unclassified 2576
28 Ga0068859_100298520 3300005617 Bacteria 1704
29 Ga0068861_100244893 3300005719 Bacteria 1527
30 Ga0068863_100004774 3300005841 Bacteria 13355
31 Ga0068863_100064407 3300005841 Bacteria 3467
32 Ga0068860_100368597 3300005843 Bacteria 1416
33 Ga0068862_100587261 3300005844 Bacteria 1068
34 Ga0070717_10036275 3300006028 Bacteria 3997
35 Ga0070717_10174622 3300006028 Bacteria 1870
36 Ga0070717_10303225 3300006028 Bacteria 1420
37 Ga0075428_100002998 3300006844 Bacteria 18421
38 Ga0075434_100039040 3300006871 Bacteria 4704
39 Ga0075434_100172073 3300006871 Unclassified 2186
40 Ga0068865_100305517 3300006881 Unclassified 1275
41 Ga0075436_100020616 3300006914 Bacteria 4524
42 Ga0075436_100023207 3300006914 Bacteria 4262
43 Ga0097620_100298519 3300006931 Bacteria 1704
44 Ga0075435_100000066 3300007076 Bacteria 54297
45 Ga0075435_100352391 3300007076 Bacteria 1262
46 Ga0105240_10617540 3300009093 Unclassified 1192
47 Ga0105245_10015199 3300009098 Bacteria 6706
48 Ga0114129_10069997 3300009147 Unclassified 4891
49 Ga0114129_10544087 3300009147 Bacteria 1511
50 Ga0105242_10192598 3300009176 Bacteria 1806
51 Ga0105249_10108471 3300009553 Bacteria 2621
52 Ga0105249_10159078 3300009553 Bacteria 2181
53 Ga0157370_10664973 3300013104 Bacteria 952
54 Ga0163162_10305724 3300013306 Bacteria 1722
55 Ga0157372_10261602 3300013307 Bacteria 2009
56 Ga0163163_10368552 3300014325 Bacteria 1493
57 Ga0163163_10507653 3300014325 Bacteria 1268
58 Ga0157380_10002494 3300014326 Bacteria 12406
59 Ga0157380_10190184 3300014326 Bacteria 1811
60 Ga0157376_10417002 3300014969 Bacteria 1302
61 Ga0157376_10418184 3300014969 Bacteria 1300
62 Ga0206349_1449192 3300020075 Bacteria 1951
63 Ga0206352_10773955 3300020078 Bacteria 5399
64 Ga0206350_10486399 3300020080 Bacteria 3187
65 Ga0213876_10067925 3300021384 Bacteria 1883
66 Ga0213875_10000064 3300021388 Bacteria 130319
67 Ga0213875_10000591 3300021388 Bacteria 29287
68 Ga0209646_1000004 3300025246 Bacteria 786587
69 Ga0209026_1000132 3300025250 Bacteria 119048
70 Ga0209758_1003353 3300025297 Bacteria 14688
71 Ga0207426_1002072 3300025302 Bacteria 13910
72 Ga0207653_10034190 3300025885 Bacteria 1651
73 Ga0207699_10000062 3300025906 Bacteria 88201
74 Ga0207684_10001770 3300025910 Bacteria 22791
75 Ga0207657_10013053 3300025919 Bacteria 8164
76 Ga0207646_10020415 3300025922 Bacteria 6137
77 Ga0207659_10000369 3300025926 Bacteria 27027
78 Ga0207700_10108452 3300025928 Bacteria 2229
79 Ga0207644_10824479 3300025931 Bacteria 776
80 Ga0207670_10014272 3300025936 Bacteria 4710
81 Ga0207665_10013122 3300025939 Bacteria 5446
82 Ga0207691_10269264 3300025940 Bacteria 1467
83 Ga0207691_10548240 3300025940 Bacteria 980
84 Ga0207661_10096149 3300025944 Bacteria 2478
85 Ga0207679_10309543 3300025945 Bacteria 1364
86 Ga0207712_10123801 3300025961 Bacteria 1960
87 Ga0207668_10068846 3300025972 Bacteria 2518
88 Ga0207640_10138179 3300025981 Unclassified 1772
89 Ga0207641_10004043 3300026088 Bacteria 12791
90 Ga0207641_10053090 3300026088 Bacteria 3434
91 Ga0207676_10315890 3300026095 Bacteria 1432
92 Ga0207674_10694495 3300026116 Bacteria 982
93 Ga0207674_10741769 3300026116 Bacteria 948
94 Ga0207675_100189306 3300026118 Bacteria 1973
95 Ga0207675_100938176 3300026118 Bacteria 882
96 Ga0207683_10297692 3300026121 Bacteria 1476
97 Ga0207698_10079222 3300026142 Bacteria 2641
98 Ga0268266_10293048 3300028379 Bacteria 1516
99 Ga0268264_10285225 3300028381 Bacteria 1548
100 Ga0265762_1025662 3300030760 Bacteria 1100
101 Ga0265325_10000204 3300031241 Bacteria 42066
102 Ga0265339_10000619 3300031249 Bacteria 27549
103 Ga0265331_10000427 3300031250 Bacteria 42238
104 Ga0265316_10113261 3300031344 Archaea 2053
105 Ga0265316_10129644 3300031344 Unclassified 1900
106 Ga0265313_10000821 3300031595 Bacteria 31354
107 Ga0316579_10003423 3300031691 Bacteria 6182
108 Ga0265314_10001445 3300031711 Bacteria 26553
109 Ga0316576_10000041 3300031727 Bacteria 38424
110 Ga0316577_10257502 3300031733 Bacteria 987
111 Ga0307406_10387567 3300031901 Bacteria 1104
112 Ga0307416_100409983 3300032002 Bacteria 1396
113 Ga0307416_100718554 3300032002 Bacteria 1089
114 Ga0373926_0051117 3300035083 Bacteria 1490
115 Ga0373923_0028323 3300035111 Bacteria 2240
116 Ga0373954_0013985 3300035118 Bacteria 3577
117 Ga0373946_0028635 3300035171 Bacteria 2211
118 Ga0373955_0024333 3300035172 Bacteria 3096
119 Ga0373935_0045036 3300035692 Unclassified 2782
120 Ga0373927_0006158 3300035695 Bacteria 8202
121 Ga0373947_0007864 3300035725 Bacteria 6157
122 Ga0373937_0020807 3300036401 Bacteria 5885
123 Ga0373937_0170944 3300036401 Bacteria 2039
124 Ga0316582_0050072 3300036647 Bacteria 2644
125 Ga0316582_0230282 3300036647 Unclassified 1268
126 Ga0316584_0219285 3300036712 Bacteria 1398
127 Ga0373925_0212804 3300037068 Bacteria 1540
128 Ga0373925_0443263 3300037068 Bacteria 1063
129 Ga0436364_1381104 3300037853 Bacteria 29332
130 Ga0436364_1383291 3300037853 Bacteria 1419
131 Ga0436364_1400225 3300037853 Bacteria 4987
132 Ga0436364_1456228 3300037853 Bacteria 1566
133 Ga0436364_1472580 3300037853 Bacteria 129754
134 Ga0237819_07410 3300038705 Bacteria 1578
135 Ga0400483_076839 3300039062 Bacteria 1375
136 Ga0436365_0061040 3300039437 Bacteria 3092
137 Ga0436360_0337843 3300039438 Bacteria 1426
138 Ga0453683_0001352 3300044673 Bacteria 21457
139 Ga0453683_0057338 3300044673 Bacteria 2437
140 Ga0466963_0227763 3300044694 Bacteria 1306
141 Ga0453684_0006944 3300044712 Bacteria 21194
142 Ga0453684_0015943 3300044712 Bacteria 11815
143 Ga0466960_0130238 3300044901 Bacteria 1327
144 Ga0466967_0065884 3300045976 Bacteria 3226
145 Ga0495592_0012394 3300046454 Bacteria 6475
146 Ga0495651_0004634 3300046462 Bacteria 10513
147 Ga0495580_0007968 3300046472 Bacteria 8470
148 Ga0495582_0037291 3300046473 Bacteria 2674
149 Ga0495582_0092823 3300046473 Bacteria 1684
150 Ga0495608_0008334 3300046511 Bacteria 7270
151 Ga0495628_0087948 3300046516 Bacteria 2408
152 Ga0495630_0007621 3300046517 Bacteria 7740
153 Ga0495666_0011865 3300046526 Bacteria 4347
154 Ga0495652_0004982 3300046529 Bacteria 12576
155 Ga0495665_0004936 3300046531 Bacteria 7189
156 Ga0495586_0004279 3300046535 Bacteria 7630
157 Ga0495645_0028317 3300046543 Bacteria 4071
158 Ga0495667_0041631 3300046559 Bacteria 3046
159 Ga0495635_0004959 3300046663 Bacteria 9268
160 Ga0495657_0025271 3300046675 Bacteria 4221
161 Ga0495599_0054838 3300046678 Bacteria 2497
162 Ga0495623_0001134 3300046679 Bacteria 18015
163 Ga0495646_0094142 3300046680 Bacteria 1725
164 Ga0495658_0089176 3300046683 Bacteria 1824
165 Ga0495613_0021230 3300046689 Bacteria 4843
166 Ga0495624_0001216 3300046690 Bacteria 20279
167 Ga0495604_0010458 3300047317 Bacteria 7352
168 Ga0495674_0017805 3300047319 Bacteria 6615
169 Ga0495676_0262526 3300047321 Bacteria 1174
170 Ga0495675_0007152 3300047444 Bacteria 6871
171 Ga0495684_0003706 3300047471 Bacteria 11911
172 Ga0495593_0010733 3300047673 Bacteria 5280
173 Ga0495602_0022666 3300048088 Bacteria 6141
174 Ga0495614_0004522 3300048089 Bacteria 6275
175 Ga0496113_0029253 3300048916 Bacteria 3976
176 Ga0501032_0167742 3300049569 Bacteria 1440
177 Ga0501033_0074050 3300049570 Bacteria 2500
178 Ga0501036_0003480 3300049572 Bacteria 12587
179 Ga0501038_0009013 3300049574 Bacteria 9157
180 Ga0501039_0014829 3300049575 Bacteria 5961
181 Ga0501039_0392579 3300049575 Bacteria 1090
182 Ga0501040_0195082 3300049576 Bacteria 1437
183 Ga0501041_0026487 3300049577 Bacteria 3489
184 Ga0501041_0314382 3300049577 Bacteria 988
185 Ga0501041_0349807 3300049577 Bacteria 934
186 Ga0501048_0101410 3300049582 Bacteria 2031
187 Ga0501070_0528192 3300049586 Bacteria 946
188 Ga0501072_0029012 3300049588 Bacteria 4319
189 Ga0501072_0111738 3300049588 Bacteria 2175
190 Ga0501072_0233554 3300049588 Bacteria 1465
191 Ga0501073_0225917 3300049589 Bacteria 1293
192 Ga0501074_0002269 3300049590 Bacteria 13375
193 Ga0501074_0191583 3300049590 Bacteria 1458
194 Ga0501075_0009693 3300049591 Bacteria 6747
195 Ga0501075_0286824 3300049591 Bacteria 1254
196 Ga0501076_0084128 3300049592 Bacteria 2555
197 Ga0501076_0137904 3300049592 Bacteria 1981
198 Ga0501076_0348451 3300049592 Bacteria 1216
199 Ga0501077_0058129 3300049593 Bacteria 2455
200 Ga0501079_0023404 3300049741 Bacteria 4740
201 Ga0501079_0209436 3300049741 Unclassified 1523
202 Ga0501083_0050374 3300049744 Bacteria 2803
203 Ga0501045_0003931 3300049824 Bacteria 10237
204 nmdc:mga05p37_109271_c1 3300050507 Unclassified 3402
205 nmdc:mga0qj67_224574_c1 3300050509 Bacteria 1524
206 nmdc:mga0n895_100060_c1 3300050512 Bacteria 2908
207 nmdc:mga0n895_11037_c1 3300050512 Bacteria 8032
208 nmdc:mga0n895_195438_c1 3300050512 Unclassified 2054
209 nmdc:mga0rr50_17_c2 3300050513 Bacteria 129969
210 nmdc:mga0rr50_367395_c1 3300050513 Bacteria 1212
211 nmdc:mga08x19_33229_c1 3300050514 Bacteria 3255
212 nmdc:mga0a205_6218_c2 3300050515 Bacteria 9922
213 Ga0495595_0137444 3300053084 Bacteria 1197
214 Ga0495595_0184148 3300053084 Bacteria 1036
215 Ga0495619_0045043 3300053085 Bacteria 2897
216 Ga0500643_000333 3300053087 Bacteria 37726
217 Ga0500652_002834 3300053131 Bacteria 5237
218 Ga0500568_0002607 3300053139 Bacteria 10488
219 Ga0501084_0004835 3300054114 Bacteria 11009
220 Ga0530510_0056385 3300061734 Unclassified 2838
221 Ga0530510_0145186 3300061734 Bacteria 1750

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025931 Ga0207644_10824479 Ga0207644_108244791 223
2 3300047321 Ga0495676_0262526 Ga0495676_0262526_426_1115 223
3 3300044673 Ga0453683_0057338 Ga0453683_0057338_288_1079 246
4 3300025939 Ga0207665_10013122 Ga0207665_100131226 247
5 3300005347 Ga0070668_100064672 Ga0070668_1000646722 249
6 3300005843 Ga0068860_100368597 Ga0068860_1003685972 249
7 3300009553 Ga0105249_10108471 Ga0105249_101084712 249
8 3300025972 Ga0207668_10068846 Ga0207668_100688462 249
9 3300028381 Ga0268264_10285225 Ga0268264_102852252 249
10 3300005293 Ga0065715_10002487 Ga0065715_100024873 250
11 3300014326 Ga0157380_10002494 Ga0157380_100024943 250
12 3300037853 Ga0436364_1400225 Ga0436364_1400225_1392_2180 251
13 iso_pu_bacteria 8055172936 8055173325 251
14 3300049582 Ga0501048_0101410 Ga0501048_0101410_1238_2017 252
15 3300005434 Ga0070709_10000056 Ga0070709_1000005637 253
16 3300025906 Ga0207699_10000062 Ga0207699_1000006239 253
17 iso_pu_bacteria 2884086401 2884088732 253
18 3300031344 Ga0265316_10113261 Ga0265316_101132611 254
19 3300049569 Ga0501032_0167742 Ga0501032_0167742_289_1074 254
20 3300049570 Ga0501033_0074050 Ga0501033_0074050_216_1001 254
21 3300049572 Ga0501036_0003480 Ga0501036_0003480_7365_8150 254
22 3300049574 Ga0501038_0009013 Ga0501038_0009013_5522_6307 254
23 3300049575 Ga0501039_0014829 Ga0501039_0014829_4036_4821 254
24 3300049576 Ga0501040_0195082 Ga0501040_0195082_243_1028 254
25 3300049577 Ga0501041_0026487 Ga0501041_0026487_1225_2010 254
26 3300049586 Ga0501070_0528192 Ga0501070_0528192_11_796 254
27 3300049588 Ga0501072_0029012 Ga0501072_0029012_2226_3011 254
28 3300049590 Ga0501074_0002269 Ga0501074_0002269_5455_6240 254
29 3300049591 Ga0501075_0009693 Ga0501075_0009693_1600_2385 254
30 3300049592 Ga0501076_0084128 Ga0501076_0084128_1195_1980 254
31 3300049593 Ga0501077_0058129 Ga0501077_0058129_1149_1934 254
32 3300049741 Ga0501079_0023404 Ga0501079_0023404_1511_2296 254
33 3300049741 Ga0501079_0209436 Ga0501079_0209436_436_1215 254
34 3300049744 Ga0501083_0050374 Ga0501083_0050374_154_939 254
35 3300049824 Ga0501045_0003931 Ga0501045_0003931_7588_8373 254
36 3300054114 Ga0501084_0004835 Ga0501084_0004835_1234_2019 254
37 iso_pu_bacteria 2671180531 2673164730 254
38 3300005330 Ga0070690_100488402 Ga0070690_1004884021 255
39 3300061734 Ga0530510_0056385 Ga0530510_0056385_324_1121 255
40 3300021384 Ga0213876_10067925 Ga0213876_100679252 256
41 3300021388 Ga0213875_10000064 Ga0213875_100000645 256
42 3300021388 Ga0213875_10000591 Ga0213875_1000059122 256
43 3300031727 Ga0316576_10000041 Ga0316576_1000004128 256
44 3300037853 Ga0436364_1381104 Ga0436364_1381104_7125_7913 256
45 3300037853 Ga0436364_1456228 Ga0436364_1456228_670_1455 256
46 3300037853 Ga0436364_1472580 Ga0436364_1472580_5429_6217 256
47 3300039437 Ga0436365_0061040 Ga0436365_0061040_1393_2178 256
48 iso_pu_bacteria 2617270889 2617912637 256
49 iso_pu_bacteria 2886627955 2886634165 256
50 iso_pu_bacteria 2913912277 2913916468 256
51 iso_pu_bacteria 2913939268 2913941855 256
52 iso_pu_bacteria 642555144 642601971 256
53 3300005339 Ga0070660_100004797 Ga0070660_1000047977 257
54 3300005355 Ga0070671_100090555 Ga0070671_1000905553 257
55 3300005436 Ga0070713_100004122 Ga0070713_1000041223 257
56 3300005445 Ga0070708_100007858 Ga0070708_1000078582 257
57 3300005467 Ga0070706_100010782 Ga0070706_1000107822 257
58 3300005467 Ga0070706_100335236 Ga0070706_1003352361 257
59 3300005518 Ga0070699_100004482 Ga0070699_1000044822 257
60 3300005518 Ga0070699_100406198 Ga0070699_1004061982 257
61 3300005536 Ga0070697_100010717 Ga0070697_1000107171 257
62 3300005548 Ga0070665_100240537 Ga0070665_1002405372 257
63 3300005841 Ga0068863_100004774 Ga0068863_1000047749 257
64 3300005841 Ga0068863_100064407 Ga0068863_1000644074 257
65 3300005844 Ga0068862_100587261 Ga0068862_1005872611 257
66 3300006028 Ga0070717_10303225 Ga0070717_103032251 257
67 3300006844 Ga0075428_100002998 Ga0075428_10000299811 257
68 3300006871 Ga0075434_100039040 Ga0075434_1000390404 257
69 3300006914 Ga0075436_100023207 Ga0075436_1000232074 257
70 3300007076 Ga0075435_100000066 Ga0075435_10000006616 257
71 3300007076 Ga0075435_100352391 Ga0075435_1003523912 257
72 3300009147 Ga0114129_10544087 Ga0114129_105440871 257
73 3300013307 Ga0157372_10261602 Ga0157372_102616022 257
74 3300014325 Ga0163163_10507653 Ga0163163_105076532 257
75 3300014969 Ga0157376_10417002 Ga0157376_104170022 257
76 3300014969 Ga0157376_10418184 Ga0157376_104181842 257
77 3300020075 Ga0206349_1449192 Ga0206349_14491922 257
78 3300020078 Ga0206352_10773955 Ga0206352_107739553 257
79 3300020080 Ga0206350_10486399 Ga0206350_104863993 257
80 3300025885 Ga0207653_10034190 Ga0207653_100341901 257
81 3300025919 Ga0207657_10013053 Ga0207657_100130537 257
82 3300025922 Ga0207646_10020415 Ga0207646_100204152 257
83 3300025928 Ga0207700_10108452 Ga0207700_101084522 257
84 3300025940 Ga0207691_10548240 Ga0207691_105482402 257
85 3300025944 Ga0207661_10096149 Ga0207661_100961492 257
86 3300025945 Ga0207679_10309543 Ga0207679_103095431 257
87 3300026088 Ga0207641_10004043 Ga0207641_100040439 257
88 3300026088 Ga0207641_10053090 Ga0207641_100530903 257
89 3300026095 Ga0207676_10315890 Ga0207676_103158902 257
90 3300026116 Ga0207674_10694495 Ga0207674_106944952 257
91 3300026116 Ga0207674_10741769 Ga0207674_107417691 257
92 3300026118 Ga0207675_100938176 Ga0207675_1009381761 257
93 3300026121 Ga0207683_10297692 Ga0207683_102976922 257
94 3300028379 Ga0268266_10293048 Ga0268266_102930482 257
95 3300031691 Ga0316579_10003423 Ga0316579_100034235 257
96 3300035083 Ga0373926_0051117 Ga0373926_0051117_105_896 257
97 3300035111 Ga0373923_0028323 Ga0373923_0028323_488_1279 257
98 3300035118 Ga0373954_0013985 Ga0373954_0013985_848_1639 257
99 3300035172 Ga0373955_0024333 Ga0373955_0024333_377_1168 257
100 3300035692 Ga0373935_0045036 Ga0373935_0045036_394_1185 257
101 3300035695 Ga0373927_0006158 Ga0373927_0006158_1627_2418 257
102 3300035725 Ga0373947_0007864 Ga0373947_0007864_386_1177 257
103 3300036401 Ga0373937_0020807 Ga0373937_0020807_1803_2594 257
104 3300036647 Ga0316582_0050072 Ga0316582_0050072_1507_2394 257
105 3300037068 Ga0373925_0212804 Ga0373925_0212804_696_1487 257
106 3300037068 Ga0373925_0443263 Ga0373925_0443263_179_976 257
107 3300039438 Ga0436360_0337843 Ga0436360_0337843_352_1140 257
108 3300044673 Ga0453683_0001352 Ga0453683_0001352_14154_14942 257
109 3300044694 Ga0466963_0227763 Ga0466963_0227763_61_900 257
110 3300044901 Ga0466960_0130238 Ga0466960_0130238_379_1218 257
111 3300045976 Ga0466967_0065884 Ga0466967_0065884_1391_2230 257
112 3300046454 Ga0495592_0012394 Ga0495592_0012394_4452_5243 257
113 3300046462 Ga0495651_0004634 Ga0495651_0004634_3622_4413 257
114 3300046472 Ga0495580_0007968 Ga0495580_0007968_3836_4627 257
115 3300046473 Ga0495582_0037291 Ga0495582_0037291_566_1390 257
116 3300046473 Ga0495582_0092823 Ga0495582_0092823_275_1096 257
117 3300046511 Ga0495608_0008334 Ga0495608_0008334_4519_5310 257
118 3300046516 Ga0495628_0087948 Ga0495628_0087948_615_1406 257
119 3300046517 Ga0495630_0007621 Ga0495630_0007621_6101_6892 257
120 3300046526 Ga0495666_0011865 Ga0495666_0011865_1111_1902 257
121 3300046529 Ga0495652_0004982 Ga0495652_0004982_5096_5887 257
122 3300046531 Ga0495665_0004936 Ga0495665_0004936_4608_5399 257
123 3300046535 Ga0495586_0004279 Ga0495586_0004279_4959_5750 257
124 3300046543 Ga0495645_0028317 Ga0495645_0028317_937_1728 257
125 3300046559 Ga0495667_0041631 Ga0495667_0041631_701_1492 257
126 3300046663 Ga0495635_0004959 Ga0495635_0004959_7013_7804 257
127 3300046675 Ga0495657_0025271 Ga0495657_0025271_849_1640 257
128 3300046678 Ga0495599_0054838 Ga0495599_0054838_379_1170 257
129 3300046679 Ga0495623_0001134 Ga0495623_0001134_13578_14369 257
130 3300046680 Ga0495646_0094142 Ga0495646_0094142_574_1365 257
131 3300046683 Ga0495658_0089176 Ga0495658_0089176_820_1641 257
132 3300046689 Ga0495613_0021230 Ga0495613_0021230_2428_3219 257
133 3300046690 Ga0495624_0001216 Ga0495624_0001216_14647_15438 257
134 3300047317 Ga0495604_0010458 Ga0495604_0010458_5097_5888 257
135 3300047319 Ga0495674_0017805 Ga0495674_0017805_2660_3451 257
136 3300047444 Ga0495675_0007152 Ga0495675_0007152_2788_3579 257
137 3300047471 Ga0495684_0003706 Ga0495684_0003706_848_1639 257
138 3300047673 Ga0495593_0010733 Ga0495593_0010733_2970_3761 257
139 3300048088 Ga0495602_0022666 Ga0495602_0022666_2788_3579 257
140 3300048089 Ga0495614_0004522 Ga0495614_0004522_1509_2300 257
141 3300050509 nmdc:mga0qj67_224574_c1 nmdc:mga0qj67_224574_c1_26_814 257
142 3300050512 nmdc:mga0n895_100060_c1 nmdc:mga0n895_100060_c1_914_1702 257
143 3300050513 nmdc:mga0rr50_17_c2 nmdc:mga0rr50_17_c2_61472_62260 257
144 3300050513 nmdc:mga0rr50_367395_c1 nmdc:mga0rr50_367395_c1_100_888 257
145 3300053084 Ga0495595_0137444 Ga0495595_0137444_212_1006 257
146 iso_pu_bacteria 2831426010 2831426935 257
147 iso_pu_bacteria 2848694841 2848700972 257
148 iso_pu_bacteria 2849660919 2849667179 257
149 iso_pu_bacteria 2913844669 2913844990 257
150 3300005458 Ga0070681_10536342 Ga0070681_105363422 258
151 3300005467 Ga0070706_100005945 Ga0070706_1000059455 258
152 3300005471 Ga0070698_100000183 Ga0070698_10000018323 258
153 3300005536 Ga0070697_100052168 Ga0070697_1000521683 258
154 3300005547 Ga0070693_100076455 Ga0070693_1000764552 258
155 3300005578 Ga0068854_100033487 Ga0068854_1000334872 258
156 3300005616 Ga0068852_100103443 Ga0068852_1001034433 258
157 3300006028 Ga0070717_10036275 Ga0070717_100362753 258
158 3300006871 Ga0075434_100172073 Ga0075434_1001720733 258
159 3300006914 Ga0075436_100020616 Ga0075436_1000206164 258
160 3300009147 Ga0114129_10069997 Ga0114129_100699973 258
161 3300014326 Ga0157380_10190184 Ga0157380_101901842 258
162 3300025910 Ga0207684_10001770 Ga0207684_1000177018 258
163 3300025926 Ga0207659_10000369 Ga0207659_100003693 258
164 3300025981 Ga0207640_10138179 Ga0207640_101381792 258
165 3300026142 Ga0207698_10079222 Ga0207698_100792223 258
166 3300031344 Ga0265316_10129644 Ga0265316_101296442 258
167 3300031901 Ga0307406_10387567 Ga0307406_103875672 258
168 3300032002 Ga0307416_100409983 Ga0307416_1004099832 258
169 3300032002 Ga0307416_100718554 Ga0307416_1007185542 258
170 3300036647 Ga0316582_0230282 Ga0316582_0230282_261_1058 258
171 3300036712 Ga0316584_0219285 Ga0316584_0219285_128_1018 258
172 3300039062 Ga0400483_076839 Ga0400483_076839_61_999 258
173 3300048916 Ga0496113_0029253 Ga0496113_0029253_3133_3927 258
174 3300049577 Ga0501041_0314382 Ga0501041_0314382_166_957 258
175 3300049589 Ga0501073_0225917 Ga0501073_0225917_410_1210 258
176 3300050507 nmdc:mga05p37_109271_c1 nmdc:mga05p37_109271_c1_73_870 258
177 3300050512 nmdc:mga0n895_11037_c1 nmdc:mga0n895_11037_c1_3931_4746 258
178 3300050512 nmdc:mga0n895_195438_c1 nmdc:mga0n895_195438_c1_631_1428 258
179 3300050514 nmdc:mga08x19_33229_c1 nmdc:mga08x19_33229_c1_2372_3163 258
180 3300050515 nmdc:mga0a205_6218_c2 nmdc:mga0a205_6218_c2_2134_2931 258
181 3300053084 Ga0495595_0184148 Ga0495595_0184148_22_831 258
182 3300053085 Ga0495619_0045043 Ga0495619_0045043_930_1739 258
183 3300053087 Ga0500643_000333 Ga0500643_000333_27567_28361 258
184 3300053139 Ga0500568_0002607 Ga0500568_0002607_8583_9377 258
185 iso_pu_bacteria 2884791551 2884792769 258
186 3300005544 Ga0070686_100371612 Ga0070686_1003716121 259
187 3300005617 Ga0068859_100298520 Ga0068859_1002985202 259
188 3300005719 Ga0068861_100244893 Ga0068861_1002448932 259
189 3300006881 Ga0068865_100305517 Ga0068865_1003055171 259
190 3300006931 Ga0097620_100298519 Ga0097620_1002985192 259
191 3300009176 Ga0105242_10192598 Ga0105242_101925982 259
192 3300009553 Ga0105249_10159078 Ga0105249_101590782 259
193 3300013306 Ga0163162_10305724 Ga0163162_103057242 259
194 3300025936 Ga0207670_10014272 Ga0207670_100142723 259
195 3300025961 Ga0207712_10123801 Ga0207712_101238012 259
196 3300026118 Ga0207675_100189306 Ga0207675_1001893062 259
197 3300031733 Ga0316577_10257502 Ga0316577_102575022 259
198 3300037853 Ga0436364_1383291 Ga0436364_1383291_218_1024 259
199 3300049577 Ga0501041_0349807 Ga0501041_0349807_66_869 259
200 3300049588 Ga0501072_0111738 Ga0501072_0111738_1306_2109 259
201 3300049588 Ga0501072_0233554 Ga0501072_0233554_166_987 259
202 3300049590 Ga0501074_0191583 Ga0501074_0191583_385_1188 259
203 3300049591 Ga0501075_0286824 Ga0501075_0286824_36_830 259
204 3300049592 Ga0501076_0137904 Ga0501076_0137904_345_1148 259
205 3300049592 Ga0501076_0348451 Ga0501076_0348451_14_808 259
206 3300061734 Ga0530510_0145186 Ga0530510_0145186_846_1640 259
207 3300005536 Ga0070697_100233364 Ga0070697_1002333641 260
208 3300006028 Ga0070717_10174622 Ga0070717_101746223 260
209 3300009093 Ga0105240_10617540 Ga0105240_106175401 260
210 3300009098 Ga0105245_10015199 Ga0105245_100151994 260
211 3300014325 Ga0163163_10368552 Ga0163163_103685522 260
212 3300025940 Ga0207691_10269264 Ga0207691_102692642 260
213 3300030760 Ga0265762_1025662 Ga0265762_10256622 260
214 3300031241 Ga0265325_10000204 Ga0265325_1000020417 260
215 3300031249 Ga0265339_10000619 Ga0265339_1000061910 260
216 3300031250 Ga0265331_10000427 Ga0265331_1000042718 260
217 3300031595 Ga0265313_10000821 Ga0265313_1000082118 260
218 3300031711 Ga0265314_10001445 Ga0265314_100014454 260
219 3300035171 Ga0373946_0028635 Ga0373946_0028635_1198_1998 260
220 3300036401 Ga0373937_0170944 Ga0373937_0170944_801_1601 260
221 3300038705 Ga0237819_07410 Ga0237819_07410_361_1161 260
222 3300044712 Ga0453684_0015943 Ga0453684_0015943_2177_2977 260
223 3300049575 Ga0501039_0392579 Ga0501039_0392579_106_903 260
224 iso_pu_bacteria 2929921140 2929922197 260
225 iso_pu_bacteria 8003151029 8003154845 260
226 3300044712 Ga0453684_0006944 Ga0453684_0006944_4508_5311 261
227 3300013104 Ga0157370_10664973 Ga0157370_106649731 262
228 3300001979 JGI24740J21852_10001950 JGI24740J21852_100019509 264
229 3300002738 JGI25154J39366_1000003 JGI25154J39366_1000003213 264
230 3300003320 rootH2_10027898 rootH2_100278986 264
231 3300003354 JGI25160J50197_1009585 JGI25160J50197_10095852 264
232 3300025246 Ga0209646_1000004 Ga0209646_1000004126 264
233 3300025250 Ga0209026_1000132 Ga0209026_100013276 264
234 3300025297 Ga0209758_1003353 Ga0209758_100335310 264
235 3300025302 Ga0207426_1002072 Ga0207426_10020725 264
236 3300053131 Ga0500652_002834 Ga0500652_002834_2510_3304 264

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02567

PhzC-PhzF

Phenazine biosynthesis-like protein

57

308

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s7j-assembly2.cif.gz_B crystal structure of phenazine biosynthesis protein phzf family (enterococcus faecalis) 0.958 1 262
1s7j-assembly2.cif.gz_B crystal structure of phenazine biosynthesis protein phzf family (enterococcus faecalis) 0.9544 1 262
4dun-assembly1.cif.gz_A-2 1.76a x-ray crystal structure of a putative phenazine biosynthesis phzc/phzf protein from clostridium difficile (strain 630) 0.9288 3 262
4dun-assembly1.cif.gz_A-2 1.76a x-ray crystal structure of a putative phenazine biosynthesis phzc/phzf protein from clostridium difficile (strain 630) 0.9219 3 262
5iwe-assembly1.cif.gz_A-2 e45q mutant of phenazine biosynthesis protein phzf in complex with (5r,6r)-6-azaniumyl-5-ethoxycyclohexa-1,3-diene-1-carboxylate 0.8707 1 262
ID Description Score Start End Superfamily
af_F4JHW1_176_307_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9745 132 256 3.10.310.10
af_A0A1P8ARL5_195_308_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9686 149 256 3.10.310.10
af_K7LH11_163_288_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9682 147 256 3.10.310.10
1s7jA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9601 1 112 3.10.310.10
af_B6U0C2_164_278_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9596 147 243 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A433WE13-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9839 1 262 GO:0005737
GO:0009058
GO:0016853
AF-A0A6M0AQ84-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9836 5 112 GO:0005737
GO:0009058
GO:0016853
AF-A0A2M7WEE9-F1-model_v4 Oxidoreductase 0.9827 3 263 GO:0005737
GO:0009058
GO:0016853
AF-A0A354HVP3-F1-model_v4 PhzF family phenazine biosynthesis protein 0.9825 35 118 GO:0005737
GO:0009058
GO:0016853
AF-A0A7C3KTL0-F1-model_v4 PhzF family phenazine biosynthesis protein 0.981 1 77 GO:0005737
GO:0009058
GO:0016853

Feature Viewer

pLDDT pTM Quality
94.68 0.9 High
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Predicted Structure (AlphaFold2)

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