F349301

General Info

Members Datasets Scaffolds Average Seq Length
236 173 233 370

Family's Representative Sequence

Representative Sequence 3300042131|Ga0450894_000441|Ga0450894_000441_3080_4369
Length 411
Sequence MLANRARELADSSFDSALFRVHPWTSLHVHREVMQSANGTARLPPTVARTTIAAMSPARGRREFLKTTLSTAALGGPPRLKFSAIGLNHGHINGQCQSVIRGGGQLVSFYAKEPDLVAAFQKRFPDAKLARSEQEILEDQAIQLIVSASIPKDRAPLAIAAMRHGKDVMLDKPGITTLAQLAEVKKVQAETKRICSILYSERHENRATVKAGELVKAGAIGKVIQTIGLGPHRTNLKTRPAWFFDRDSYGGILCDIGSHQFDQFLFFTGSNQASVVASQVGNFNHPQHPGLQDFGDAMVRGNGGVGYVRVDWFTPDGLSTWGDGRLTILGTEGFIEIRKNVDIGGRSGGNHLFLVDQKETRHVDTTGVELPYGRLLVDDVLNRTETSMPQAHVFLATELALQTQAKAQTVT

Samples

Sample ID Description Type Environment
1 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
2 2909042592 Labrys sp. LIt4 Isolate Nodule
3 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
47 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
76 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
119 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
120 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
121 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
122 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
123 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
124 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
125 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
126 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
127 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
128 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
129 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
130 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
155 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
168 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
169 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
172 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
173 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.73
Metatranscriptomes 0
Isolates 1.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.78
Nodule 0.85
Rhizoplane 2.97
Rhizosphere 88.14
Stem 0
Stem Tuber 0
Unclassified 1.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065714_10123277 3300005288 Bacteria 1323
2 Ga0065712_10002735 3300005290 Bacteria 7796
3 Ga0065707_10123504 3300005295 Bacteria 2011
4 Ga0070670_100088904 3300005331 Bacteria 2655
5 Ga0070670_100269883 3300005331 Bacteria 1484
6 Ga0068869_100129321 3300005334 Bacteria 1940
7 Ga0068869_100134326 3300005334 Bacteria 1905
8 Ga0068869_100143187 3300005334 Bacteria 1848
9 Ga0070680_100191105 3300005336 Bacteria 1725
10 Ga0070682_100003501 3300005337 Bacteria 8682
11 Ga0070660_100244896 3300005339 Bacteria 1461
12 Ga0070689_100028321 3300005340 Bacteria 4234
13 Ga0070689_100136514 3300005340 Bacteria 1970
14 Ga0070669_100003526 3300005353 Bacteria 11286
15 Ga0070675_100062863 3300005354 Bacteria 3068
16 Ga0070675_100069100 3300005354 Bacteria 2926
17 Ga0070671_100060305 3300005355 Unclassified 3159
18 Ga0070673_100113689 3300005364 Bacteria 2248
19 Ga0070688_100003607 3300005365 Bacteria 7987
20 Ga0070659_100048866 3300005366 Bacteria 3324
21 Ga0070700_100064760 3300005441 Bacteria 2315
22 Ga0070708_100059678 3300005445 Bacteria 3402
23 Ga0070663_100182283 3300005455 Bacteria 1630
24 Ga0070681_10009320 3300005458 Bacteria 9658
25 Ga0070681_10082321 3300005458 Bacteria 3174
26 Ga0068867_100140164 3300005459 Bacteria 1889
27 Ga0070685_10012398 3300005466 Bacteria 4478
28 Ga0070685_10033743 3300005466 Bacteria 2878
29 Ga0070706_100399111 3300005467 Unclassified 1280
30 Ga0070707_100100211 3300005468 Bacteria 2806
31 Ga0070698_100172299 3300005471 Bacteria 2105
32 Ga0070698_100174048 3300005471 Bacteria 2092
33 Ga0070679_100000485 3300005530 Bacteria 34087
34 Ga0070679_100002374 3300005530 Bacteria 17062
35 Ga0070697_100074450 3300005536 Bacteria 2790
36 Ga0070672_100007821 3300005543 Bacteria 7294
37 Ga0070686_100042451 3300005544 Bacteria 2849
38 Ga0070695_100019620 3300005545 Bacteria 4119
39 Ga0070665_100151414 3300005548 Bacteria 2323
40 Ga0068855_100112940 3300005563 Bacteria 3117
41 Ga0070664_100033056 3300005564 Bacteria 4329
42 Ga0070664_100048738 3300005564 Bacteria 3580
43 Ga0068856_100067394 3300005614 Bacteria 3537
44 Ga0068852_100089177 3300005616 Bacteria 2756
45 Ga0068852_100259245 3300005616 Unclassified 1669
46 Ga0068859_100182048 3300005617 Bacteria 2184
47 Ga0068864_100023907 3300005618 Bacteria 5135
48 Ga0068864_100034052 3300005618 Bacteria 4331
49 Ga0068861_100033033 3300005719 Bacteria 3814
50 Ga0068870_10000495 3300005840 Bacteria 14904
51 Ga0068870_10007341 3300005840 Bacteria 4910
52 Ga0068870_10049898 3300005840 Bacteria 2209
53 Ga0068863_100245471 3300005841 Bacteria 1729
54 Ga0068860_100100228 3300005843 Bacteria 2763
55 Ga0081539_10010553 3300005985 Bacteria 7481
56 Ga0075365_10093317 3300006038 Bacteria 2053
57 Ga0075368_10002658 3300006042 Bacteria 5878
58 Ga0075364_10008003 3300006051 Bacteria 6299
59 Ga0070716_100106648 3300006173 Bacteria 1728
60 Ga0075367_10024827 3300006178 Bacteria 3382
61 Ga0075366_10024015 3300006195 Bacteria 3554
62 Ga0075366_10090023 3300006195 Unclassified 1837
63 Ga0068871_100042283 3300006358 Bacteria 3657
64 Ga0068871_100196998 3300006358 Bacteria 1738
65 Ga0075428_100115177 3300006844 Bacteria 2928
66 Ga0075428_100191737 3300006844 Bacteria 2210
67 Ga0075430_100016530 3300006846 Bacteria 6283
68 Ga0075430_100035628 3300006846 Bacteria 4222
69 Ga0075430_100035996 3300006846 Bacteria 4198
70 Ga0075431_100003127 3300006847 Bacteria 16007
71 Ga0075431_100060706 3300006847 Bacteria 3901
72 Ga0075429_100098977 3300006880 Bacteria 2544
73 Ga0068865_100074852 3300006881 Unclassified 2413
74 Ga0068865_100131095 3300006881 Bacteria 1878
75 Ga0097620_100182048 3300006931 Bacteria 2184
76 Ga0111539_10024671 3300009094 Bacteria 7375
77 Ga0111539_10061004 3300009094 Bacteria 4468
78 Ga0111539_10105363 3300009094 Bacteria 3308
79 Ga0114129_10005003 3300009147 Bacteria 18665
80 Ga0114129_10013486 3300009147 Bacteria 11646
81 Ga0105243_10040054 3300009148 Bacteria 3657
82 Ga0105243_10043731 3300009148 Bacteria 3511
83 Ga0105243_10094359 3300009148 Bacteria 2470
84 Ga0105242_10055047 3300009176 Bacteria 3254
85 Ga0105248_10080008 3300009177 Bacteria 3673
86 Ga0105248_10176681 3300009177 Bacteria 2406
87 Ga0105237_10154720 3300009545 Bacteria 2289
88 Ga0105249_10001024 3300009553 Bacteria 24701
89 Ga0105249_10013222 3300009553 Bacteria 7284
90 Ga0105246_10089336 3300011119 Bacteria 2216
91 Ga0157373_10017470 3300013100 Bacteria 5224
92 Ga0157374_10411203 3300013296 Bacteria 1351
93 Ga0163162_10080646 3300013306 Bacteria 3323
94 Ga0163162_10267629 3300013306 Bacteria 1840
95 Ga0157372_10073770 3300013307 Bacteria 3847
96 Ga0157375_10034809 3300013308 Bacteria 4801
97 Ga0157375_10068757 3300013308 Bacteria 3545
98 Ga0157375_10092580 3300013308 Bacteria 3087
99 Ga0163163_10083029 3300014325 Bacteria 3208
100 Ga0163163_10256029 3300014325 Bacteria 1801
101 Ga0157380_10007743 3300014326 Bacteria 7647
102 Ga0157380_10009647 3300014326 Bacteria 6923
103 Ga0157380_10178974 3300014326 Bacteria 1861
104 Ga0157379_10090112 3300014968 Bacteria 2751
105 Ga0157379_10278082 3300014968 Bacteria 1523
106 Ga0157376_10010577 3300014969 Bacteria 6756
107 Ga0209026_1000663 3300025250 Bacteria 21055
108 Ga0209676_1000097 3300025292 Bacteria 237203
109 Ga0207697_10033435 3300025315 Bacteria 2105
110 Ga0207688_10085910 3300025901 Bacteria 1802
111 Ga0207688_10116614 3300025901 Bacteria 1555
112 Ga0207680_10050543 3300025903 Bacteria 2481
113 Ga0207680_10067715 3300025903 Bacteria 2200
114 Ga0207643_10002849 3300025908 Bacteria 9342
115 Ga0207643_10013713 3300025908 Bacteria 4395
116 Ga0207705_10008288 3300025909 Bacteria 7592
117 Ga0207707_10034489 3300025912 Bacteria 4428
118 Ga0207695_10059218 3300025913 Bacteria 3973
119 Ga0207671_10032667 3300025914 Bacteria 3872
120 Ga0207660_10019364 3300025917 Bacteria 4549
121 Ga0207662_10000440 3300025918 Bacteria 18440
122 Ga0207662_10043978 3300025918 Bacteria 2636
123 Ga0207657_10146014 3300025919 Bacteria 1929
124 Ga0207652_10040465 3300025921 Bacteria 3958
125 Ga0207652_10189230 3300025921 Bacteria 1851
126 Ga0207681_10007674 3300025923 Bacteria 6608
127 Ga0207650_10021960 3300025925 Bacteria 4515
128 Ga0207659_10019596 3300025926 Bacteria 4457
129 Ga0207659_10054200 3300025926 Bacteria 2863
130 Ga0207659_10079318 3300025926 Bacteria 2422
131 Ga0207644_10089264 3300025931 Bacteria 2294
132 Ga0207706_10055399 3300025933 Bacteria 3497
133 Ga0207709_10066981 3300025935 Bacteria 2264
134 Ga0207709_10175554 3300025935 Bacteria 1508
135 Ga0207669_10021508 3300025937 Bacteria 3408
136 Ga0207704_10053313 3300025938 Unclassified 2458
137 Ga0207704_10125870 3300025938 Bacteria 1764
138 Ga0207704_10127982 3300025938 Bacteria 1752
139 Ga0207704_10310368 3300025938 Unclassified 1212
140 Ga0207665_10096668 3300025939 Bacteria 2055
141 Ga0207691_10015802 3300025940 Bacteria 7172
142 Ga0207691_10017979 3300025940 Bacteria 6696
143 Ga0207711_10064912 3300025941 Bacteria 3154
144 Ga0207711_10120774 3300025941 Bacteria 2339
145 Ga0207689_10143461 3300025942 Bacteria 1968
146 Ga0207689_10196644 3300025942 Bacteria 1664
147 Ga0207689_10309186 3300025942 Bacteria 1311
148 Ga0207679_10051370 3300025945 Bacteria 3017
149 Ga0207667_10120947 3300025949 Bacteria 2698
150 Ga0207651_10029090 3300025960 Bacteria 3496
151 Ga0207712_10007606 3300025961 Bacteria 6847
152 Ga0207668_10216396 3300025972 Bacteria 1535
153 Ga0207677_10096382 3300026023 Bacteria 2164
154 Ga0207639_10049838 3300026041 Bacteria 3178
155 Ga0207639_10365592 3300026041 Bacteria 1292
156 Ga0207641_10128639 3300026088 Bacteria 2271
157 Ga0207648_10008330 3300026089 Bacteria 10059
158 Ga0207648_10018631 3300026089 Bacteria 6281
159 Ga0207648_10192711 3300026089 Bacteria 1807
160 Ga0207648_10205969 3300026089 Bacteria 1745
161 Ga0207676_10161415 3300026095 Bacteria 1942
162 Ga0207676_10411160 3300026095 Bacteria 1267
163 Ga0207674_10073894 3300026116 Bacteria 3422
164 Ga0207675_100049781 3300026118 Bacteria 3909
165 Ga0207698_10187802 3300026142 Bacteria 1837
166 Ga0207698_10264290 3300026142 Bacteria 1582
167 Ga0209813_10020284 3300027866 Bacteria 1858
168 Ga0207428_10034646 3300027907 Bacteria 4134
169 Ga0268265_10019327 3300028380 Bacteria 4733
170 Ga0268265_10035695 3300028380 Bacteria 3635
171 Ga0268264_10028358 3300028381 Bacteria 4579
172 Ga0307515_10000016 3300028794 Bacteria 554870
173 Ga0265327_10032000 3300031251 Bacteria 2950
174 Ga0307514_10019357 3300031649 Bacteria 5571
175 Ga0316576_10190751 3300031727 Bacteria 1545
176 Ga0307406_10199307 3300031901 Bacteria 1472
177 Ga0316585_10031780 3300032137 Bacteria 1661
178 Ga0316584_0029116 3300036712 Unclassified 4076
179 Ga0439433_0014319 3300041999 Bacteria 1746
180 Ga0450923_008476 3300042125 Bacteria 1771
181 Ga0450894_000441 3300042131 Bacteria 7134
182 Ga0450896_009277 3300042133 Bacteria 1369
183 Ga0439435_0000577 3300042436 Bacteria 5937
184 Ga0450918_006719 3300042531 Bacteria 2048
185 Ga0453684_0000626 3300044712 Bacteria 128697
186 Ga0451576_0005368 3300045051 Bacteria 16110
187 Ga0495629_0229385 3300046459 Bacteria 1280
188 Ga0495638_0002953 3300046460 Bacteria 13571
189 Ga0495634_0033725 3300046642 Bacteria 3516
190 Ga0495684_0228656 3300047471 Bacteria 1361
191 Ga0495686_0148045 3300047472 Bacteria 1380
192 Ga0496101_0107004 3300048904 Bacteria 2101
193 Ga0496104_0187075 3300048907 Bacteria 1982
194 Ga0496108_0222962 3300048911 Bacteria 1638
195 Ga0496110_0078200 3300048913 Bacteria 2945
196 Ga0496112_0031441 3300048915 Bacteria 5148
197 Ga0496113_0254915 3300048916 Bacteria 1401
198 Ga0496114_0011017 3300048917 Bacteria 7210
199 Ga0501033_0054678 3300049570 Bacteria 2953
200 Ga0501034_0123523 3300049571 Bacteria 2575
201 Ga0501037_0109677 3300049573 Bacteria 1989
202 Ga0501038_0072455 3300049574 Bacteria 2919
203 Ga0501039_0044748 3300049575 Bacteria 3420
204 Ga0501040_0032586 3300049576 Unclassified 3527
205 Ga0501043_0154246 3300049579 Bacteria 1797
206 Ga0501047_0002823 3300049581 Bacteria 16492
207 Ga0501070_0263684 3300049586 Bacteria 1408
208 Ga0501072_0102310 3300049588 Bacteria 2277
209 Ga0501072_0132351 3300049588 Bacteria 1988
210 Ga0501075_0058904 3300049591 Bacteria 2893
211 Ga0501035_0005563 3300049822 Bacteria 11905
212 Ga0501044_0001076 3300049823 Bacteria 32626
213 nmdc:mga00v17_17407_c1 3300050491 Bacteria 4068
214 nmdc:mga0k408_797_c1 3300050493 Bacteria 17372
215 nmdc:mga06z11_44254_c1 3300050494 Bacteria 2244
216 nmdc:mga05p37_109531_c1 3300050507 Bacteria 3397
217 nmdc:mga05p37_18235_c1 3300050507 Bacteria 8480
218 nmdc:mga05p37_7551_c1 3300050507 Bacteria 12171
219 nmdc:mga09592_35576_c1 3300050508 Bacteria 4170
220 nmdc:mga0qj67_19009_c1 3300050509 Bacteria 5245
221 nmdc:mga06r32_9415_c1 3300050510 Bacteria 8813
222 nmdc:mga08y16_107172_c1 3300050511 Bacteria 2909
223 nmdc:mga08y16_15259_c1 3300050511 Bacteria 8082
224 nmdc:mga08y16_294382_c1 3300050511 Bacteria 1673
225 Ga0495601_0010267 3300053077 Bacteria 5569
226 Ga0500635_0000476 3300053080 Bacteria 11416
227 Ga0495619_0008180 3300053085 Bacteria 6617
228 Ga0500568_0001245 3300053139 Bacteria 16885
229 Ga0500616_0000188 3300053153 Bacteria 101183
230 Ga0500616_0011388 3300053153 Bacteria 5256
231 Ga0500645_001053 3300053730 Bacteria 15332
232 Ga0590074_004276 3300059423 Bacteria 2360
233 Ga0590075_016762 3300059424 Bacteria 1803

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2909042592 2909045128 331
2 iso_pu_bacteria 2513237351 2514587954 333
3 3300047472 Ga0495686_0148045 Ga0495686_0148045_36_1061 335
4 3300006846 Ga0075430_100035628 Ga0075430_1000356281 336
5 3300006847 Ga0075431_100003127 Ga0075431_1000031273 336
6 3300025292 Ga0209676_1000097 Ga0209676_1000097233 336
7 3300050510 nmdc:mga06r32_9415_c1 nmdc:mga06r32_9415_c1_7653_8663 336
8 3300032137 Ga0316585_10031780 Ga0316585_100317802 337
9 3300036712 Ga0316584_0029116 Ga0316584_0029116_1746_2771 337
10 3300042436 Ga0439435_0000577 Ga0439435_0000577_3928_4968 337
11 3300050508 nmdc:mga09592_35576_c1 nmdc:mga09592_35576_c1_3113_4141 337
12 3300031727 Ga0316576_10190751 Ga0316576_101907511 338
13 3300005467 Ga0070706_100399111 Ga0070706_1003991111 339
14 3300025942 Ga0207689_10309186 Ga0207689_103091861 339
15 3300005536 Ga0070697_100074450 Ga0070697_1000744502 340
16 3300005719 Ga0068861_100033033 Ga0068861_1000330334 340
17 3300005840 Ga0068870_10000495 Ga0068870_1000049511 340
18 3300006881 Ga0068865_100131095 Ga0068865_1001310952 340
19 3300009148 Ga0105243_10094359 Ga0105243_100943592 340
20 3300009553 Ga0105249_10001024 Ga0105249_100010245 340
21 3300013308 Ga0157375_10034809 Ga0157375_100348095 340
22 3300014326 Ga0157380_10009647 Ga0157380_100096475 340
23 3300025908 Ga0207643_10002849 Ga0207643_100028495 340
24 3300025938 Ga0207704_10125870 Ga0207704_101258701 340
25 3300025961 Ga0207712_10007606 Ga0207712_100076062 340
26 3300025972 Ga0207668_10216396 Ga0207668_102163962 340
27 3300026089 Ga0207648_10018631 Ga0207648_100186315 340
28 3300026118 Ga0207675_100049781 Ga0207675_1000497812 340
29 3300028380 Ga0268265_10035695 Ga0268265_100356952 340
30 3300042531 Ga0450918_006719 Ga0450918_006719_836_2014 342
31 3300005530 Ga0070679_100002374 Ga0070679_10000237411 344
32 3300044712 Ga0453684_0000626 Ga0453684_0000626_10730_11893 344
33 3300045051 Ga0451576_0005368 Ga0451576_0005368_14528_15691 344
34 3300048917 Ga0496114_0011017 Ga0496114_0011017_2169_3302 350
35 3300005616 Ga0068852_100089177 Ga0068852_1000891772 351
36 3300006358 Ga0068871_100042283 Ga0068871_1000422832 351
37 3300006844 Ga0075428_100191737 Ga0075428_1001917371 351
38 3300006881 Ga0068865_100074852 Ga0068865_1000748522 351
39 3300009148 Ga0105243_10040054 Ga0105243_100400542 351
40 3300009176 Ga0105242_10055047 Ga0105242_100550472 351
41 3300013306 Ga0163162_10080646 Ga0163162_100806462 351
42 3300013308 Ga0157375_10092580 Ga0157375_100925802 351
43 3300014968 Ga0157379_10090112 Ga0157379_100901122 351
44 3300014969 Ga0157376_10010577 Ga0157376_100105774 351
45 3300025903 Ga0207680_10067715 Ga0207680_100677152 351
46 3300025933 Ga0207706_10055399 Ga0207706_100553991 351
47 3300025935 Ga0207709_10066981 Ga0207709_100669812 351
48 3300025938 Ga0207704_10053313 Ga0207704_100533132 351
49 3300026023 Ga0207677_10096382 Ga0207677_100963822 351
50 3300026142 Ga0207698_10187802 Ga0207698_101878021 351
51 3300048911 Ga0496108_0222962 Ga0496108_0222962_448_1584 351
52 3300048913 Ga0496110_0078200 Ga0496110_0078200_593_1729 351
53 3300059423 Ga0590074_004276 Ga0590074_004276_465_1604 352
54 3300059424 Ga0590075_016762 Ga0590075_016762_383_1522 352
55 3300005468 Ga0070707_100100211 Ga0070707_1001002112 354
56 3300005471 Ga0070698_100174048 Ga0070698_1001740481 354
57 3300049575 Ga0501039_0044748 Ga0501039_0044748_1604_2737 354
58 3300049576 Ga0501040_0032586 Ga0501040_0032586_228_1361 354
59 3300049588 Ga0501072_0102310 Ga0501072_0102310_975_2108 354
60 3300005331 Ga0070670_100269883 Ga0070670_1002698831 355
61 3300005334 Ga0068869_100134326 Ga0068869_1001343262 355
62 3300005340 Ga0070689_100136514 Ga0070689_1001365141 355
63 3300005353 Ga0070669_100003526 Ga0070669_1000035266 355
64 3300005354 Ga0070675_100062863 Ga0070675_1000628632 355
65 3300005364 Ga0070673_100113689 Ga0070673_1001136892 355
66 3300005366 Ga0070659_100048866 Ga0070659_1000488664 355
67 3300005458 Ga0070681_10082321 Ga0070681_100823211 355
68 3300005459 Ga0068867_100140164 Ga0068867_1001401641 355
69 3300005466 Ga0070685_10033743 Ga0070685_100337432 355
70 3300005563 Ga0068855_100112940 Ga0068855_1001129402 355
71 3300005564 Ga0070664_100048738 Ga0070664_1000487384 355
72 3300005614 Ga0068856_100067394 Ga0068856_1000673943 355
73 3300005616 Ga0068852_100259245 Ga0068852_1002592451 355
74 3300005840 Ga0068870_10007341 Ga0068870_100073414 355
75 3300006846 Ga0075430_100016530 Ga0075430_1000165304 355
76 3300006880 Ga0075429_100098977 Ga0075429_1000989772 355
77 3300009094 Ga0111539_10105363 Ga0111539_101053634 355
78 3300009177 Ga0105248_10080008 Ga0105248_100800082 355
79 3300009545 Ga0105237_10154720 Ga0105237_101547201 355
80 3300011119 Ga0105246_10089336 Ga0105246_100893362 355
81 3300013100 Ga0157373_10017470 Ga0157373_100174704 355
82 3300025901 Ga0207688_10085910 Ga0207688_100859102 355
83 3300025908 Ga0207643_10013713 Ga0207643_100137134 355
84 3300025913 Ga0207695_10059218 Ga0207695_100592182 355
85 3300025914 Ga0207671_10032667 Ga0207671_100326671 355
86 3300025918 Ga0207662_10043978 Ga0207662_100439783 355
87 3300025923 Ga0207681_10007674 Ga0207681_100076746 355
88 3300025925 Ga0207650_10021960 Ga0207650_100219602 355
89 3300025926 Ga0207659_10019596 Ga0207659_100195962 355
90 3300025940 Ga0207691_10017979 Ga0207691_100179791 355
91 3300025945 Ga0207679_10051370 Ga0207679_100513704 355
92 3300025949 Ga0207667_10120947 Ga0207667_101209473 355
93 3300025960 Ga0207651_10029090 Ga0207651_100290902 355
94 3300026041 Ga0207639_10365592 Ga0207639_103655921 355
95 3300026089 Ga0207648_10008330 Ga0207648_100083307 355
96 3300026089 Ga0207648_10192711 Ga0207648_101927112 355
97 3300026095 Ga0207676_10411160 Ga0207676_104111601 355
98 3300026116 Ga0207674_10073894 Ga0207674_100738942 355
99 3300049574 Ga0501038_0072455 Ga0501038_0072455_68_1285 355
100 3300049588 Ga0501072_0132351 Ga0501072_0132351_65_1282 355
101 3300050507 nmdc:mga05p37_109531_c1 nmdc:mga05p37_109531_c1_2181_3347 355
102 3300050509 nmdc:mga0qj67_19009_c1 nmdc:mga0qj67_19009_c1_1275_2357 355
103 3300050511 nmdc:mga08y16_294382_c1 nmdc:mga08y16_294382_c1_105_1262 355
104 3300053153 Ga0500616_0000188 Ga0500616_0000188_54734_55921 356
105 3300006844 Ga0075428_100115177 Ga0075428_1001151773 357
106 3300006847 Ga0075431_100060706 Ga0075431_1000607063 357
107 3300046460 Ga0495638_0002953 Ga0495638_0002953_10878_12020 357
108 3300005336 Ga0070680_100191105 Ga0070680_1001911051 358
109 3300005337 Ga0070682_100003501 Ga0070682_1000035012 358
110 3300005339 Ga0070660_100244896 Ga0070660_1002448961 358
111 3300005530 Ga0070679_100000485 Ga0070679_10000048522 358
112 3300013307 Ga0157372_10073770 Ga0157372_100737703 358
113 3300025250 Ga0209026_1000663 Ga0209026_10006633 358
114 3300025909 Ga0207705_10008288 Ga0207705_100082882 358
115 3300025919 Ga0207657_10146014 Ga0207657_101460141 358
116 3300025921 Ga0207652_10040465 Ga0207652_100404652 358
117 3300026041 Ga0207639_10049838 Ga0207639_100498381 358
118 3300028794 Ga0307515_10000016 Ga0307515_10000016136 358
119 3300031649 Ga0307514_10019357 Ga0307514_100193573 358
120 3300042125 Ga0450923_008476 Ga0450923_008476_570_1760 358
121 3300042133 Ga0450896_009277 Ga0450896_009277_133_1338 358
122 3300046459 Ga0495629_0229385 Ga0495629_0229385_141_1247 359
123 3300005441 Ga0070700_100064760 Ga0070700_1000647602 360
124 3300005985 Ga0081539_10010553 Ga0081539_100105536 360
125 3300006195 Ga0075366_10024015 Ga0075366_100240153 360
126 3300013306 Ga0163162_10267629 Ga0163162_102676292 360
127 3300025918 Ga0207662_10000440 Ga0207662_100004402 360
128 3300025941 Ga0207711_10064912 Ga0207711_100649121 360
129 3300050493 nmdc:mga0k408_797_c1 nmdc:mga0k408_797_c1_13199_14365 360
130 3300005458 Ga0070681_10009320 Ga0070681_100093208 361
131 3300005471 Ga0070698_100172299 Ga0070698_1001722992 361
132 3300025912 Ga0207707_10034489 Ga0207707_100344893 361
133 3300025917 Ga0207660_10019364 Ga0207660_100193642 361
134 3300025921 Ga0207652_10189230 Ga0207652_101892302 361
135 3300042131 Ga0450894_000441 Ga0450894_000441_3080_4369 361
136 3300053730 Ga0500645_001053 Ga0500645_001053_4170_5360 361
137 3300006173 Ga0070716_100106648 Ga0070716_1001066483 362
138 3300025939 Ga0207665_10096668 Ga0207665_100966682 362
139 3300049579 Ga0501043_0154246 Ga0501043_0154246_49_1191 362
140 3300013296 Ga0157374_10411203 Ga0157374_104112032 364
141 3300005334 Ga0068869_100143187 Ga0068869_1001431872 366
142 3300005618 Ga0068864_100023907 Ga0068864_1000239074 366
143 3300005843 Ga0068860_100100228 Ga0068860_1001002281 366
144 3300026095 Ga0207676_10161415 Ga0207676_101614152 366
145 3300028381 Ga0268264_10028358 Ga0268264_100283584 366
146 3300005331 Ga0070670_100088904 Ga0070670_1000889042 367
147 3300005455 Ga0070663_100182283 Ga0070663_1001822832 367
148 3300005545 Ga0070695_100019620 Ga0070695_1000196202 367
149 3300005564 Ga0070664_100033056 Ga0070664_1000330562 367
150 3300005841 Ga0068863_100245471 Ga0068863_1002454712 367
151 3300009177 Ga0105248_10176681 Ga0105248_101766812 367
152 3300014325 Ga0163163_10256029 Ga0163163_102560292 367
153 3300014968 Ga0157379_10278082 Ga0157379_102780821 367
154 3300025926 Ga0207659_10054200 Ga0207659_100542002 367
155 3300025931 Ga0207644_10089264 Ga0207644_100892642 367
156 3300025941 Ga0207711_10120774 Ga0207711_101207742 367
157 3300026142 Ga0207698_10264290 Ga0207698_102642901 367
158 3300053080 Ga0500635_0000476 Ga0500635_0000476_4768_5916 367
159 3300005617 Ga0068859_100182048 Ga0068859_1001820482 368
160 3300006931 Ga0097620_100182048 Ga0097620_1001820482 368
161 3300009094 Ga0111539_10024671 Ga0111539_100246712 369
162 3300027907 Ga0207428_10034646 Ga0207428_100346463 369
163 3300031251 Ga0265327_10032000 Ga0265327_100320002 369
164 3300050511 nmdc:mga08y16_15259_c1 nmdc:mga08y16_15259_c1_5863_7017 369
165 3300053153 Ga0500616_0011388 Ga0500616_0011388_3788_4939 369
166 3300041999 Ga0439433_0014319 Ga0439433_0014319_86_1216 370
167 3300049570 Ga0501033_0054678 Ga0501033_0054678_19_1173 370
168 3300049571 Ga0501034_0123523 Ga0501034_0123523_288_1442 370
169 3300049573 Ga0501037_0109677 Ga0501037_0109677_129_1283 370
170 3300049581 Ga0501047_0002823 Ga0501047_0002823_3597_4751 370
171 3300049586 Ga0501070_0263684 Ga0501070_0263684_205_1359 370
172 3300049822 Ga0501035_0005563 Ga0501035_0005563_152_1306 370
173 3300049823 Ga0501044_0001076 Ga0501044_0001076_9781_10935 370
174 3300048904 Ga0496101_0107004 Ga0496101_0107004_677_1831 371
175 3300048907 Ga0496104_0187075 Ga0496104_0187075_622_1776 371
176 3300014326 Ga0157380_10007743 Ga0157380_100077435 372
177 iso_pu_bacteria 2910245624 2910250257 372
178 3300005334 Ga0068869_100129321 Ga0068869_1001293212 373
179 3300005445 Ga0070708_100059678 Ga0070708_1000596781 373
180 3300005544 Ga0070686_100042451 Ga0070686_1000424512 373
181 3300009147 Ga0114129_10005003 Ga0114129_1000500312 373
182 3300009147 Ga0114129_10013486 Ga0114129_100134863 373
183 3300009148 Ga0105243_10043731 Ga0105243_100437311 373
184 3300014326 Ga0157380_10178974 Ga0157380_101789741 373
185 3300025937 Ga0207669_10021508 Ga0207669_100215081 373
186 3300025938 Ga0207704_10127982 Ga0207704_101279822 373
187 3300025938 Ga0207704_10310368 Ga0207704_103103681 373
188 3300025942 Ga0207689_10143461 Ga0207689_101434612 373
189 3300025942 Ga0207689_10196644 Ga0207689_101966442 373
190 3300046642 Ga0495634_0033725 Ga0495634_0033725_1886_3019 373
191 3300047471 Ga0495684_0228656 Ga0495684_0228656_191_1324 373
192 3300049591 Ga0501075_0058904 Ga0501075_0058904_222_1358 373
193 3300050507 nmdc:mga05p37_18235_c1 nmdc:mga05p37_18235_c1_6542_7687 373
194 3300050507 nmdc:mga05p37_7551_c1 nmdc:mga05p37_7551_c1_6117_7274 373
195 3300053077 Ga0495601_0010267 Ga0495601_0010267_153_1286 373
196 3300053085 Ga0495619_0008180 Ga0495619_0008180_696_1829 373
197 3300005295 Ga0065707_10123504 Ga0065707_101235042 374
198 3300005340 Ga0070689_100028321 Ga0070689_1000283213 374
199 3300005354 Ga0070675_100069100 Ga0070675_1000691002 374
200 3300005840 Ga0068870_10049898 Ga0068870_100498982 374
201 3300025901 Ga0207688_10116614 Ga0207688_101166142 374
202 3300025926 Ga0207659_10079318 Ga0207659_100793182 374
203 3300006038 Ga0075365_10093317 Ga0075365_100933172 375
204 3300006042 Ga0075368_10002658 Ga0075368_100026583 375
205 3300006051 Ga0075364_10008003 Ga0075364_100080035 375
206 3300006178 Ga0075367_10024827 Ga0075367_100248273 375
207 3300006195 Ga0075366_10090023 Ga0075366_100900232 375
208 3300013308 Ga0157375_10068757 Ga0157375_100687572 375
209 3300027866 Ga0209813_10020284 Ga0209813_100202842 375
210 3300031901 Ga0307406_10199307 Ga0307406_101993071 375
211 3300050491 nmdc:mga00v17_17407_c1 nmdc:mga00v17_17407_c1_652_1800 375
212 3300050494 nmdc:mga06z11_44254_c1 nmdc:mga06z11_44254_c1_565_1713 375
213 3300053139 Ga0500568_0001245 Ga0500568_0001245_467_1633 375
214 3300005290 Ga0065712_10002735 Ga0065712_100027355 376
215 3300005355 Ga0070671_100060305 Ga0070671_1000603053 376
216 3300005466 Ga0070685_10012398 Ga0070685_100123981 376
217 3300006846 Ga0075430_100035996 Ga0075430_1000359964 376
218 3300009094 Ga0111539_10061004 Ga0111539_100610043 376
219 3300025935 Ga0207709_10175554 Ga0207709_101755541 376
220 3300050511 nmdc:mga08y16_107172_c1 nmdc:mga08y16_107172_c1_922_2208 376
221 3300005288 Ga0065714_10123277 Ga0065714_101232771 379
222 3300005365 Ga0070688_100003607 Ga0070688_1000036077 379
223 3300005543 Ga0070672_100007821 Ga0070672_1000078215 379
224 3300005548 Ga0070665_100151414 Ga0070665_1001514142 379
225 3300005618 Ga0068864_100034052 Ga0068864_1000340521 379
226 3300006358 Ga0068871_100196998 Ga0068871_1001969982 379
227 3300009553 Ga0105249_10013222 Ga0105249_100132223 379
228 3300014325 Ga0163163_10083029 Ga0163163_100830292 379
229 3300025315 Ga0207697_10033435 Ga0207697_100334352 379
230 3300025903 Ga0207680_10050543 Ga0207680_100505432 379
231 3300025940 Ga0207691_10015802 Ga0207691_100158025 379
232 3300026088 Ga0207641_10128639 Ga0207641_101286392 379
233 3300026089 Ga0207648_10205969 Ga0207648_102059692 379
234 3300028380 Ga0268265_10019327 Ga0268265_100193275 379
235 3300048915 Ga0496112_0031441 Ga0496112_0031441_2286_3452 379
236 3300048916 Ga0496113_0254915 Ga0496113_0254915_190_1356 379

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

208

336

0.92

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

83

199

0.85

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

212

391

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3u3x-assembly3.cif.gz_M crystal structure of a putative oxidoreductase from sinorhizobium meliloti 1021 0.9816 48 376
3u3x-assembly3.cif.gz_M crystal structure of a putative oxidoreductase from sinorhizobium meliloti 1021 0.9757 48 376
2p2s-assembly1.cif.gz_B crystal structure of putative oxidoreductase (yp_050235.1) from erwinia carotovora atroseptica scri1043 at 1.25 a resolution 0.9657 48 379
2p2s-assembly1.cif.gz_B crystal structure of putative oxidoreductase (yp_050235.1) from erwinia carotovora atroseptica scri1043 at 1.25 a resolution 0.96 48 379
3ip3-assembly4.cif.gz_G structure of putative oxidoreductase (tm_0425) from thermotoga maritima 0.8729 48 375
ID Description Score Start End Superfamily
3u3xG02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9705 167 376 3.30.360.10
3u3xG02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9655 167 376 3.30.360.10
2p2sB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9525 48 168 3.40.50.720
2p2sB02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9237 169 379 3.30.360.10
2p2sB02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9097 169 379 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A1S9CA72-F1-model_v4 Oxidoreductase 0.9405 40 379 GO:0000166
GO:0016491
AF-A0A1S9CA72-F1-model_v4 Oxidoreductase 0.9117 40 379 GO:0000166
GO:0016491
AF-A0A356AU04-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9018 48 378 GO:0000166
GO:0016491
AF-A0A356AU04-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.8913 48 378 GO:0000166
GO:0016491
AF-A0A329MFN4-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.8804 48 379 GO:0000166
GO:0016491

Feature Viewer

pLDDT pTM Quality
87.54 0.85 High
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Predicted Structure (AlphaFold2)

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