F349459

General Info

Members Datasets Scaffolds Average Seq Length
236 178 233 283

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0006161|Ga0501032_0006161_1693_2670
Length 325
Sequence MRIINRFLEHSPHSGGNLGRRPVIPARAAAYLPTDGKEIMMTDRTKTPAGLVIEKRNWKFGRDMLPRRWWHGGDPGRTAFYNALSSTFPVGEKFFMSAVRHYREGAPEPLREQIDDFIFQESTHSREHIFFNRQARDAGYDLASSEDRAARTIAWAKRRSPIMQLAATCALEHFTAILANAVLSDSAHLAGADTEAQRMWRWHAVEEIEHKGVAYDTWLHATRNKLRILCWSIRSLAMLSAAVRFHWVIYRNTANLLAQDGKNDLATWRRLRSYLYDYPGAMRLIARGMIGYLRPGFHPWQHDDRALAKRALASLTPPLITPLPR

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
3 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
4 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
5 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
6 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
7 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
8 3300001978 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6 Metagenome Rhizosphere
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
11 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
12 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
13 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
14 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
15 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
16 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
17 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
18 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
21 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
36 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
37 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
38 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
39 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
79 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
113 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
114 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
115 3300031010 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
117 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
118 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
119 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
122 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
123 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
136 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
137 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
138 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
142 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
143 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
152 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
153 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
154 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
172 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
173 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
174 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
177 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.46
Metatranscriptomes 1.27
Isolates 1.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 0
Rhizoplane 2.97
Rhizosphere 84.32
Stem 0
Stem Tuber 0
Unclassified 3.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_3956261 2162886006 Unclassified 1913
2 JGI24736J21556_1000023 3300001904 Bacteria 25735
3 JGI24741J21665_1009143 3300001915 Bacteria 1833
4 JGI24752J21851_1000094 3300001976 Bacteria 11786
5 JGI24747J21853_1008417 3300001978 Bacteria 1008
6 JGI24740J21852_10010247 3300001979 Bacteria 3621
7 JGI24739J22299_10001293 3300001989 Bacteria 9413
8 JGI24737J22298_10002290 3300001990 Bacteria 6807
9 JGI24735J21928_10004282 3300002067 Bacteria 4810
10 JGI24748J21848_1000037 3300002074 Bacteria 72188
11 JGI24738J21930_10005723 3300002075 Bacteria 2958
12 JGI24034J26672_10000024 3300002239 Bacteria 114754
13 JGI24034J26672_10000025 3300002239 Bacteria 110791
14 JGI24751J29686_10011498 3300002459 Bacteria 1825
15 JGI25153J46596_10000065 3300003215 Bacteria 124645
16 Ga0055536_1000510 3300003781 Bacteria 26793
17 Ga0055531_10006903 3300003794 Bacteria 6323
18 Ga0058859_11245709 3300004798 Bacteria 1168
19 Ga0065707_10000450 3300005295 Bacteria 70667
20 Ga0065707_10086699 3300005295 Bacteria 5345
21 Ga0070658_10001464 3300005327 Bacteria 20130
22 Ga0070658_10111514 3300005327 Bacteria 2267
23 Ga0070683_100476685 3300005329 Bacteria 1191
24 Ga0070690_100000202 3300005330 Bacteria 31141
25 Ga0070666_10000007 3300005335 Bacteria 293732
26 Ga0070666_10000053 3300005335 Bacteria 97883
27 Ga0068868_100000196 3300005338 Bacteria 40318
28 Ga0068868_100069645 3300005338 Bacteria 2804
29 Ga0070660_100184411 3300005339 Bacteria 1689
30 Ga0070689_100019960 3300005340 Bacteria 4965
31 Ga0070661_100024548 3300005344 Bacteria 4324
32 Ga0070692_10219956 3300005345 Bacteria 1122
33 Ga0070669_100000009 3300005353 Bacteria 224683
34 Ga0070669_100133004 3300005353 Bacteria 1911
35 Ga0070669_100180285 3300005353 Bacteria 1652
36 Ga0070671_100060135 3300005355 Bacteria 3163
37 Ga0070674_100000262 3300005356 Bacteria 26193
38 Ga0070673_100019761 3300005364 Bacteria 4844
39 Ga0070688_100001083 3300005365 Bacteria 13631
40 Ga0070659_100008979 3300005366 Bacteria 7330
41 Ga0070714_100014049 3300005435 Bacteria 6424
42 Ga0070678_100000992 3300005456 Bacteria 14678
43 Ga0070662_100204227 3300005457 Bacteria 1569
44 Ga0068867_100150212 3300005459 Bacteria 1829
45 Ga0070685_10000120 3300005466 Bacteria 50329
46 Ga0070685_10242030 3300005466 Bacteria 1191
47 Ga0070672_100012043 3300005543 Bacteria 6053
48 Ga0070686_100000050 3300005544 Bacteria 97879
49 Ga0070665_100000004 3300005548 Bacteria 785500
50 Ga0070665_100000049 3300005548 Bacteria 261123
51 Ga0068855_100000063 3300005563 Bacteria 131058
52 Ga0068852_100046696 3300005616 Bacteria 3691
53 Ga0068852_100134505 3300005616 Bacteria 2281
54 Ga0068852_100219136 3300005616 Bacteria 1809
55 Ga0068859_100029559 3300005617 Bacteria 5499
56 Ga0068864_100007740 3300005618 Bacteria 8853
57 Ga0068861_100004511 3300005719 Bacteria 9348
58 Ga0068861_100077735 3300005719 Bacteria 2589
59 Ga0068851_10053002 3300005834 Bacteria 2064
60 Ga0068863_100000010 3300005841 Bacteria 237758
61 Ga0068858_100048726 3300005842 Bacteria 3924
62 Ga0068858_100279326 3300005842 Bacteria 1590
63 Ga0068860_100000189 3300005843 Bacteria 97880
64 Ga0081539_10015852 3300005985 Bacteria 5437
65 Ga0070712_100002967 3300006175 Bacteria 10502
66 Ga0097621_100271122 3300006237 Bacteria 1491
67 Ga0075430_100014523 3300006846 Bacteria 6709
68 Ga0097620_100029558 3300006931 Bacteria 5499
69 Ga0105240_10000079 3300009093 Bacteria 195849
70 Ga0105240_10022997 3300009093 Bacteria 8255
71 Ga0105240_10337879 3300009093 Bacteria 1712
72 Ga0105247_10010079 3300009101 Bacteria 5726
73 Ga0105247_10130700 3300009101 Bacteria 1636
74 Ga0105243_10002024 3300009148 Bacteria 17214
75 Ga0105241_10014247 3300009174 Bacteria 5824
76 Ga0105241_10113515 3300009174 Bacteria 2172
77 Ga0105248_10000013 3300009177 Bacteria 328864
78 Ga0105248_10027608 3300009177 Bacteria 6321
79 Ga0105238_10000972 3300009551 Bacteria 29340
80 Ga0105238_10020223 3300009551 Bacteria 6776
81 Ga0105249_10000157 3300009553 Bacteria 83216
82 Ga0105239_10000376 3300010375 Bacteria 65247
83 Ga0105239_10027656 3300010375 Bacteria 6240
84 Ga0105246_10295144 3300011119 Bacteria 1306
85 Ga0157373_10001370 3300013100 Bacteria 18709
86 Ga0157370_10036925 3300013104 Bacteria 4739
87 Ga0157369_10007235 3300013105 Bacteria 12785
88 Ga0157369_10023012 3300013105 Bacteria 6946
89 Ga0157374_10062917 3300013296 Bacteria 3479
90 Ga0163162_10005226 3300013306 Bacteria 12516
91 Ga0157380_10000740 3300014326 Bacteria 20395
92 Ga0157380_10002438 3300014326 Bacteria 12534
93 Ga0157380_10021924 3300014326 Bacteria 4797
94 Ga0157379_10011941 3300014968 Bacteria 7589
95 Ga0157376_10231934 3300014969 Bacteria 1715
96 Ga0163161_10000020 3300017792 Bacteria 214642
97 Ga0209676_1000085 3300025292 Bacteria 273425
98 Ga0209676_1002099 3300025292 Bacteria 15389
99 Ga0209676_1002536 3300025292 Bacteria 12713
100 Ga0209676_1033390 3300025292 Bacteria 1534
101 Ga0209758_1000007 3300025297 Bacteria 1270410
102 Ga0209050_1016762 3300025298 Bacteria 2971
103 Ga0209257_1000330 3300025304 Bacteria 99167
104 Ga0209257_1004946 3300025304 Bacteria 9775
105 Ga0207680_10000017 3300025903 Bacteria 97899
106 Ga0207647_10001726 3300025904 Bacteria 16752
107 Ga0207654_10009517 3300025911 Bacteria 4937
108 Ga0207695_10005689 3300025913 Bacteria 16443
109 Ga0207695_10041275 3300025913 Bacteria 4939
110 Ga0207671_10114551 3300025914 Bacteria 2055
111 Ga0207693_10005586 3300025915 Bacteria 10452
112 Ga0207681_10000020 3300025923 Bacteria 240498
113 Ga0207681_10056340 3300025923 Bacteria 2681
114 Ga0207694_10000470 3300025924 Bacteria 36877
115 Ga0207694_10016124 3300025924 Bacteria 5638
116 Ga0207664_10010592 3300025929 Bacteria 6516
117 Ga0207644_10232070 3300025931 Bacteria 1466
118 Ga0207690_10357635 3300025932 Bacteria 1156
119 Ga0207709_10000109 3300025935 Bacteria 128086
120 Ga0207670_10056854 3300025936 Bacteria 2651
121 Ga0207669_10000048 3300025937 Bacteria 60914
122 Ga0207711_10000003 3300025941 Bacteria 1042791
123 Ga0207711_10000005 3300025941 Bacteria 822972
124 Ga0207711_10000015 3300025941 Bacteria 494097
125 Ga0207711_10006161 3300025941 Bacteria 10137
126 Ga0207667_10000041 3300025949 Bacteria 272265
127 Ga0207667_10021852 3300025949 Bacteria 7081
128 Ga0207651_10059232 3300025960 Bacteria 2651
129 Ga0207712_10000099 3300025961 Bacteria 97890
130 Ga0207677_10047664 3300026023 Bacteria 2879
131 Ga0207703_10004625 3300026035 Bacteria 11249
132 Ga0207703_10302532 3300026035 Bacteria 1459
133 Ga0207678_10023926 3300026067 Bacteria 5341
134 Ga0207702_10003500 3300026078 Bacteria 14313
135 Ga0207641_10000171 3300026088 Bacteria 90550
136 Ga0207648_10189900 3300026089 Bacteria 1820
137 Ga0207676_10001404 3300026095 Bacteria 17924
138 Ga0207675_100003758 3300026118 Bacteria 14792
139 Ga0207675_100043857 3300026118 Bacteria 4178
140 Ga0207683_10000619 3300026121 Bacteria 32637
141 Ga0207698_10001620 3300026142 Bacteria 13098
142 Ga0207698_10034537 3300026142 Bacteria 3687
143 Ga0209974_10044114 3300027876 Bacteria 1487
144 Ga0268266_10000004 3300028379 Bacteria 1495817
145 Ga0268266_10000009 3300028379 Bacteria 1097737
146 Ga0268266_10000036 3300028379 Bacteria 348910
147 Ga0268264_10000023 3300028381 Bacteria 471408
148 Ga0265334_10003326 3300028573 Bacteria 7334
149 Ga0265334_10083248 3300028573 Unclassified 1176
150 Ga0265338_10000007 3300028800 Bacteria 498229
151 Ga0265338_10133806 3300028800 Bacteria 1953
152 Ga0265770_1000118 3300030878 Bacteria 9442
153 Ga0265771_1000871 3300031010 Bacteria 1288
154 Ga0265332_10126991 3300031238 Bacteria 1070
155 Ga0265325_10000001 3300031241 Bacteria 726814
156 Ga0265339_10000689 3300031249 Bacteria 26094
157 Ga0265316_10170850 3300031344 Bacteria 1622
158 Ga0307408_100254501 3300031548 Bacteria 1450
159 Ga0265313_10008249 3300031595 Bacteria 6952
160 Ga0265314_10013363 3300031711 Bacteria 6636
161 Ga0307405_10002572 3300031731 Bacteria 8053
162 Ga0307413_10065495 3300031824 Bacteria 2263
163 Ga0307410_10214214 3300031852 Bacteria 1478
164 Ga0307412_10008664 3300031911 Bacteria 5816
165 Ga0307412_10153475 3300031911 Bacteria 1702
166 Ga0307414_10001003 3300032004 Bacteria 14423
167 Ga0307414_10344203 3300032004 Bacteria 1277
168 Ga0307415_100311793 3300032126 Bacteria 1308
169 Ga0373937_0004718 3300036401 Bacteria 11591
170 Ga0439448_0072856 3300042005 Bacteria 1145
171 Ga0466967_0130291 3300045976 Bacteria 2334
172 Ga0495638_0014521 3300046460 Bacteria 5317
173 Ga0495584_0019187 3300046491 Bacteria 3473
174 Ga0495606_0008940 3300046507 Bacteria 8575
175 Ga0495643_0001568 3300046522 Bacteria 20340
176 Ga0495663_0000878 3300046525 Bacteria 10136
177 Ga0495654_0010360 3300046530 Bacteria 5072
178 Ga0495621_0002678 3300046539 Bacteria 4822
179 Ga0495621_0107008 3300046539 Bacteria 1069
180 Ga0495668_0000001 3300046616 Bacteria 1013420
181 Ga0495668_0002162 3300046616 Bacteria 16877
182 Ga0495625_0010253 3300046660 Bacteria 7770
183 Ga0495625_0055322 3300046660 Bacteria 2830
184 Ga0495659_0026972 3300046664 Bacteria 1978
185 Ga0495670_0005539 3300046691 Bacteria 6198
186 Ga0495670_0013363 3300046691 Bacteria 4039
187 Ga0495589_0021219 3300046794 Bacteria 3320
188 Ga0496102_0291631 3300048905 Bacteria 1538
189 Ga0496103_0008369 3300048906 Bacteria 6145
190 Ga0496104_0053702 3300048907 Bacteria 3808
191 Ga0496105_0179198 3300048908 Bacteria 1735
192 Ga0496106_0192940 3300048909 Bacteria 1620
193 Ga0496107_0072500 3300048910 Bacteria 2504
194 Ga0496111_0256018 3300048914 Bacteria 1299
195 Ga0496116_0006374 3300048919 Bacteria 10727
196 Ga0496117_0007811 3300048920 Bacteria 10305
197 Ga0496118_0034313 3300048921 Bacteria 4142
198 Ga0496121_0181193 3300048924 Bacteria 1520
199 Ga0496121_0321657 3300048924 Bacteria 1041
200 Ga0496125_0146783 3300048928 Bacteria 1629
201 Ga0496126_0035766 3300048929 Bacteria 4650
202 Ga0501032_0005568 3300049569 Bacteria 9340
203 Ga0501032_0006161 3300049569 Bacteria 8827
204 Ga0501033_0000433 3300049570 Bacteria 40132
205 Ga0501034_0066768 3300049571 Bacteria 3610
206 Ga0501034_0163850 3300049571 Bacteria 2193
207 Ga0501036_0011349 3300049572 Bacteria 7373
208 Ga0501036_0118645 3300049572 Bacteria 2234
209 Ga0501037_0178743 3300049573 Bacteria 1506
210 Ga0501038_0029604 3300049574 Bacteria 4849
211 Ga0501038_0098839 3300049574 Bacteria 2433
212 Ga0501039_0061136 3300049575 Bacteria 2917
213 Ga0501043_0241837 3300049579 Bacteria 1392
214 Ga0501047_0297965 3300049581 Bacteria 1455
215 Ga0501080_0023043 3300049742 Bacteria 5774
216 Ga0501035_0005503 3300049822 Bacteria 11965
217 Ga0501035_0017899 3300049822 Bacteria 6536
218 Ga0501044_0005291 3300049823 Bacteria 14349
219 Ga0501044_0006511 3300049823 Bacteria 12903
220 nmdc:mga0qj67_11175_c1 3300050509 Bacteria 6723
221 nmdc:mga08y16_461491_c1 3300050511 Bacteria 1294
222 Ga0500592_000427 3300053116 Bacteria 7038
223 Ga0500592_001510 3300053116 Bacteria 3769
224 Ga0500655_004817 3300053133 Bacteria 2426
225 Ga0500568_0001033 3300053139 Bacteria 19043
226 Ga0500568_0029055 3300053139 Unclassified 2298
227 Ga0500588_0011208 3300053146 Bacteria 2188
228 Ga0500622_0002692 3300053156 Bacteria 12590
229 Ga0500622_0003684 3300053156 Bacteria 10054
230 Ga0500627_0000017 3300053158 Bacteria 119507
231 Ga0500627_0000578 3300053158 Bacteria 9863
232 Ga0500611_037457 3300053727 Unclassified 1044
233 Ga0501084_0000721 3300054114 Bacteria 25202

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025914 Ga0207671_10114551 Ga0207671_101145512 223
2 3300005295 Ga0065707_10086699 Ga0065707_100866995 252
3 3300005719 Ga0068861_100004511 Ga0068861_1000045115 252
4 3300026118 Ga0207675_100043857 Ga0207675_1000438573 252
5 3300046460 Ga0495638_0014521 Ga0495638_0014521_3500_4273 252
6 3300046660 Ga0495625_0010253 Ga0495625_0010253_2337_3110 252
7 3300048924 Ga0496121_0321657 Ga0496121_0321657_25_798 252
8 3300031010 Ga0265771_1000871 Ga0265771_10008712 260
9 3300048914 Ga0496111_0256018 Ga0496111_0256018_452_1246 262
10 3300031548 Ga0307408_100254501 Ga0307408_1002545011 269
11 3300005563 Ga0068855_100000063 Ga0068855_100000063102 270
12 3300005616 Ga0068852_100219136 Ga0068852_1002191363 270
13 3300025949 Ga0207667_10000041 Ga0207667_10000041189 270
14 3300009551 Ga0105238_10020223 Ga0105238_100202232 271
15 3300010375 Ga0105239_10027656 Ga0105239_100276563 271
16 iso_pu_bacteria 2882806704 2882808815 273
17 3300005353 Ga0070669_100133004 Ga0070669_1001330042 274
18 3300005435 Ga0070714_100014049 Ga0070714_1000140496 274
19 3300006175 Ga0070712_100002967 Ga0070712_10000296711 274
20 3300025915 Ga0207693_10005586 Ga0207693_100055869 274
21 3300025929 Ga0207664_10010592 Ga0207664_100105926 274
22 3300031852 Ga0307410_10214214 Ga0307410_102142142 274
23 3300053116 Ga0500592_001510 Ga0500592_001510_253_1113 274
24 3300053156 Ga0500622_0003684 Ga0500622_0003684_8145_8981 274
25 iso_pu_bacteria 2852653556 2852654975 274
26 iso_pu_bacteria 2852680915 2852681686 274
27 3300005345 Ga0070692_10219956 Ga0070692_102199561 275
28 3300005353 Ga0070669_100180285 Ga0070669_1001802852 275
29 3300025923 Ga0207681_10056340 Ga0207681_100563403 275
30 3300031824 Ga0307413_10065495 Ga0307413_100654952 275
31 3300036401 Ga0373937_0004718 Ga0373937_0004718_169_1002 275
32 3300046525 Ga0495663_0000878 Ga0495663_0000878_1623_2495 275
33 3300046539 Ga0495621_0002678 Ga0495621_0002678_3056_3928 275
34 3300046539 Ga0495621_0107008 Ga0495621_0107008_72_944 275
35 3300046664 Ga0495659_0026972 Ga0495659_0026972_777_1649 275
36 3300046691 Ga0495670_0013363 Ga0495670_0013363_1661_2533 275
37 3300050511 nmdc:mga08y16_461491_c1 nmdc:mga08y16_461491_c1_344_1216 275
38 3300054114 Ga0501084_0000721 Ga0501084_0000721_10661_11497 275
39 3300001915 JGI24741J21665_1009143 JGI24741J21665_10091432 276
40 3300001976 JGI24752J21851_1000094 JGI24752J21851_10000949 276
41 3300002074 JGI24748J21848_1000037 JGI24748J21848_100003733 276
42 3300002075 JGI24738J21930_10005723 JGI24738J21930_100057233 276
43 3300002239 JGI24034J26672_10000024 JGI24034J26672_1000002455 276
44 3300002239 JGI24034J26672_10000025 JGI24034J26672_1000002518 276
45 3300002459 JGI24751J29686_10011498 JGI24751J29686_100114982 276
46 3300004798 Ga0058859_11245709 Ga0058859_112457091 276
47 3300005329 Ga0070683_100476685 Ga0070683_1004766851 276
48 3300005330 Ga0070690_100000202 Ga0070690_10000020223 276
49 3300005335 Ga0070666_10000053 Ga0070666_100000536 276
50 3300005339 Ga0070660_100184411 Ga0070660_1001844112 276
51 3300005340 Ga0070689_100019960 Ga0070689_1000199602 276
52 3300005353 Ga0070669_100000009 Ga0070669_10000000949 276
53 3300005355 Ga0070671_100060135 Ga0070671_1000601353 276
54 3300005365 Ga0070688_100001083 Ga0070688_10000108311 276
55 3300005466 Ga0070685_10000120 Ga0070685_100001205 276
56 3300005544 Ga0070686_100000050 Ga0070686_1000000506 276
57 3300005548 Ga0070665_100000004 Ga0070665_100000004283 276
58 3300005617 Ga0068859_100029559 Ga0068859_1000295593 276
59 3300005618 Ga0068864_100007740 Ga0068864_1000077407 276
60 3300005719 Ga0068861_100077735 Ga0068861_1000777351 276
61 3300005841 Ga0068863_100000010 Ga0068863_10000001075 276
62 3300005842 Ga0068858_100048726 Ga0068858_1000487263 276
63 3300005843 Ga0068860_100000189 Ga0068860_1000001897 276
64 3300006931 Ga0097620_100029558 Ga0097620_1000295583 276
65 3300009093 Ga0105240_10337879 Ga0105240_103378791 276
66 3300009101 Ga0105247_10010079 Ga0105247_100100793 276
67 3300009177 Ga0105248_10027608 Ga0105248_100276084 276
68 3300009553 Ga0105249_10000157 Ga0105249_100001577 276
69 3300014326 Ga0157380_10002438 Ga0157380_100024386 276
70 3300014968 Ga0157379_10011941 Ga0157379_100119415 276
71 3300017792 Ga0163161_10000020 Ga0163161_10000020121 276
72 3300025903 Ga0207680_10000017 Ga0207680_1000001789 276
73 3300025923 Ga0207681_10000020 Ga0207681_1000002033 276
74 3300025931 Ga0207644_10232070 Ga0207644_102320702 276
75 3300025936 Ga0207670_10056854 Ga0207670_100568544 276
76 3300025941 Ga0207711_10006161 Ga0207711_100061615 276
77 3300025961 Ga0207712_10000099 Ga0207712_100000997 276
78 3300026035 Ga0207703_10004625 Ga0207703_100046253 276
79 3300026088 Ga0207641_10000171 Ga0207641_1000017150 276
80 3300026095 Ga0207676_10001404 Ga0207676_100014044 276
81 3300026118 Ga0207675_100003758 Ga0207675_1000037587 276
82 3300028379 Ga0268266_10000009 Ga0268266_10000009511 276
83 3300028381 Ga0268264_10000023 Ga0268264_10000023451 276
84 3300048906 Ga0496103_0008369 Ga0496103_0008369_3160_4002 276
85 3300048907 Ga0496104_0053702 Ga0496104_0053702_2685_3527 276
86 3300048908 Ga0496105_0179198 Ga0496105_0179198_282_1124 276
87 3300048909 Ga0496106_0192940 Ga0496106_0192940_437_1279 276
88 3300048910 Ga0496107_0072500 Ga0496107_0072500_896_1738 276
89 3300048919 Ga0496116_0006374 Ga0496116_0006374_5258_6100 276
90 3300048920 Ga0496117_0007811 Ga0496117_0007811_3386_4228 276
91 3300048921 Ga0496118_0034313 Ga0496118_0034313_640_1482 276
92 3300048924 Ga0496121_0181193 Ga0496121_0181193_221_1063 276
93 3300053146 Ga0500588_0011208 Ga0500588_0011208_796_1632 276
94 3300001904 JGI24736J21556_1000023 JGI24736J21556_100002311 277
95 3300001979 JGI24740J21852_10010247 JGI24740J21852_100102474 277
96 3300001989 JGI24739J22299_10001293 JGI24739J22299_100012937 277
97 3300001990 JGI24737J22298_10002290 JGI24737J22298_100022905 277
98 3300002067 JGI24735J21928_10004282 JGI24735J21928_100042823 277
99 3300005327 Ga0070658_10111514 Ga0070658_101115142 277
100 3300005338 Ga0068868_100000196 Ga0068868_10000019615 277
101 3300005457 Ga0070662_100204227 Ga0070662_1002042272 277
102 3300005548 Ga0070665_100000049 Ga0070665_100000049133 277
103 3300005616 Ga0068852_100134505 Ga0068852_1001345053 277
104 3300005834 Ga0068851_10053002 Ga0068851_100530022 277
105 3300006846 Ga0075430_100014523 Ga0075430_1000145235 277
106 3300009093 Ga0105240_10022997 Ga0105240_100229976 277
107 3300009101 Ga0105247_10130700 Ga0105247_101307002 277
108 3300009174 Ga0105241_10014247 Ga0105241_100142473 277
109 3300009174 Ga0105241_10113515 Ga0105241_101135151 277
110 3300013104 Ga0157370_10036925 Ga0157370_100369252 277
111 3300013105 Ga0157369_10023012 Ga0157369_100230123 277
112 3300014326 Ga0157380_10021924 Ga0157380_100219245 277
113 3300025292 Ga0209676_1002536 Ga0209676_100253610 277
114 3300025304 Ga0209257_1004946 Ga0209257_10049466 277
115 3300025904 Ga0207647_10001726 Ga0207647_1000172611 277
116 3300025911 Ga0207654_10009517 Ga0207654_100095175 277
117 3300025913 Ga0207695_10005689 Ga0207695_1000568910 277
118 3300025924 Ga0207694_10016124 Ga0207694_100161242 277
119 3300025949 Ga0207667_10021852 Ga0207667_100218524 277
120 3300026067 Ga0207678_10023926 Ga0207678_100239262 277
121 3300026078 Ga0207702_10003500 Ga0207702_100035008 277
122 3300026142 Ga0207698_10001620 Ga0207698_100016209 277
123 3300026142 Ga0207698_10034537 Ga0207698_100345373 277
124 3300027876 Ga0209974_10044114 Ga0209974_100441141 277
125 3300028379 Ga0268266_10000036 Ga0268266_10000036133 277
126 3300031731 Ga0307405_10002572 Ga0307405_100025729 277
127 3300031911 Ga0307412_10008664 Ga0307412_100086644 277
128 3300031911 Ga0307412_10153475 Ga0307412_101534751 277
129 3300046691 Ga0495670_0005539 Ga0495670_0005539_3153_4001 277
130 3300050509 nmdc:mga0qj67_11175_c1 nmdc:mga0qj67_11175_c1_867_1715 277
131 3300053158 Ga0500627_0000017 Ga0500627_0000017_91287_92141 277
132 3300001978 JGI24747J21853_1008417 JGI24747J21853_10084171 278
133 3300003215 JGI25153J46596_10000065 JGI25153J46596_10000065112 278
134 3300003781 Ga0055536_1000510 Ga0055536_100051021 278
135 3300003794 Ga0055531_10006903 Ga0055531_100069033 278
136 3300005327 Ga0070658_10001464 Ga0070658_100014645 278
137 3300005335 Ga0070666_10000007 Ga0070666_1000000781 278
138 3300005338 Ga0068868_100069645 Ga0068868_1000696452 278
139 3300005344 Ga0070661_100024548 Ga0070661_1000245485 278
140 3300005356 Ga0070674_100000262 Ga0070674_10000026213 278
141 3300005364 Ga0070673_100019761 Ga0070673_1000197614 278
142 3300005366 Ga0070659_100008979 Ga0070659_1000089797 278
143 3300005456 Ga0070678_100000992 Ga0070678_1000009929 278
144 3300005459 Ga0068867_100150212 Ga0068867_1001502121 278
145 3300005466 Ga0070685_10242030 Ga0070685_102420301 278
146 3300005543 Ga0070672_100012043 Ga0070672_1000120435 278
147 3300005616 Ga0068852_100046696 Ga0068852_1000466962 278
148 3300005842 Ga0068858_100279326 Ga0068858_1002793263 278
149 3300006237 Ga0097621_100271122 Ga0097621_1002711222 278
150 3300009093 Ga0105240_10000079 Ga0105240_10000079135 278
151 3300009148 Ga0105243_10002024 Ga0105243_100020245 278
152 3300009177 Ga0105248_10000013 Ga0105248_10000013292 278
153 3300009551 Ga0105238_10000972 Ga0105238_1000097211 278
154 3300010375 Ga0105239_10000376 Ga0105239_100003763 278
155 3300011119 Ga0105246_10295144 Ga0105246_102951441 278
156 3300013105 Ga0157369_10007235 Ga0157369_100072358 278
157 3300013296 Ga0157374_10062917 Ga0157374_100629173 278
158 3300013306 Ga0163162_10005226 Ga0163162_100052269 278
159 3300014969 Ga0157376_10231934 Ga0157376_102319342 278
160 3300025292 Ga0209676_1000085 Ga0209676_1000085224 278
161 3300025292 Ga0209676_1002099 Ga0209676_10020995 278
162 3300025292 Ga0209676_1033390 Ga0209676_10333902 278
163 3300025297 Ga0209758_1000007 Ga0209758_1000007333 278
164 3300025298 Ga0209050_1016762 Ga0209050_10167621 278
165 3300025304 Ga0209257_1000330 Ga0209257_100033076 278
166 3300025913 Ga0207695_10041275 Ga0207695_100412753 278
167 3300025924 Ga0207694_10000470 Ga0207694_1000047011 278
168 3300025932 Ga0207690_10357635 Ga0207690_103576352 278
169 3300025935 Ga0207709_10000109 Ga0207709_1000010964 278
170 3300025937 Ga0207669_10000048 Ga0207669_1000004842 278
171 3300025941 Ga0207711_10000003 Ga0207711_10000003291 278
172 3300025941 Ga0207711_10000005 Ga0207711_10000005845 278
173 3300025941 Ga0207711_10000015 Ga0207711_1000001544 278
174 3300025960 Ga0207651_10059232 Ga0207651_100592322 278
175 3300026023 Ga0207677_10047664 Ga0207677_100476643 278
176 3300026035 Ga0207703_10302532 Ga0207703_103025323 278
177 3300026089 Ga0207648_10189900 Ga0207648_101899002 278
178 3300026121 Ga0207683_10000619 Ga0207683_1000061922 278
179 3300028379 Ga0268266_10000004 Ga0268266_10000004744 278
180 3300028573 Ga0265334_10003326 Ga0265334_100033263 278
181 3300028573 Ga0265334_10083248 Ga0265334_100832481 278
182 3300028800 Ga0265338_10000007 Ga0265338_10000007476 278
183 3300028800 Ga0265338_10133806 Ga0265338_101338062 278
184 3300030878 Ga0265770_1000118 Ga0265770_100011812 278
185 3300031238 Ga0265332_10126991 Ga0265332_101269912 278
186 3300031241 Ga0265325_10000001 Ga0265325_10000001310 278
187 3300031249 Ga0265339_10000689 Ga0265339_1000068923 278
188 3300031344 Ga0265316_10170850 Ga0265316_101708501 278
189 3300031595 Ga0265313_10008249 Ga0265313_100082499 278
190 3300031711 Ga0265314_10013363 Ga0265314_100133636 278
191 3300032004 Ga0307414_10001003 Ga0307414_100010037 278
192 3300032004 Ga0307414_10344203 Ga0307414_103442032 278
193 3300042005 Ga0439448_0072856 Ga0439448_0072856_265_1128 278
194 3300046491 Ga0495584_0019187 Ga0495584_0019187_249_1103 278
195 3300046507 Ga0495606_0008940 Ga0495606_0008940_953_1807 278
196 3300046522 Ga0495643_0001568 Ga0495643_0001568_14119_14973 278
197 3300046616 Ga0495668_0000001 Ga0495668_0000001_40569_41426 278
198 3300046660 Ga0495625_0055322 Ga0495625_0055322_273_1127 278
199 3300048905 Ga0496102_0291631 Ga0496102_0291631_283_1245 278
200 3300048928 Ga0496125_0146783 Ga0496125_0146783_721_1578 278
201 3300048929 Ga0496126_0035766 Ga0496126_0035766_551_1435 278
202 3300049569 Ga0501032_0005568 Ga0501032_0005568_844_1725 278
203 3300049569 Ga0501032_0006161 Ga0501032_0006161_1693_2670 278
204 3300049570 Ga0501033_0000433 Ga0501033_0000433_2607_3584 278
205 3300049571 Ga0501034_0163850 Ga0501034_0163850_121_1098 278
206 3300049572 Ga0501036_0118645 Ga0501036_0118645_86_1063 278
207 3300049573 Ga0501037_0178743 Ga0501037_0178743_268_1245 278
208 3300049574 Ga0501038_0098839 Ga0501038_0098839_226_1203 278
209 3300049579 Ga0501043_0241837 Ga0501043_0241837_218_1195 278
210 3300049581 Ga0501047_0297965 Ga0501047_0297965_227_1204 278
211 3300049742 Ga0501080_0023043 Ga0501080_0023043_936_1805 278
212 3300049822 Ga0501035_0005503 Ga0501035_0005503_1060_2037 278
213 3300049823 Ga0501044_0006511 Ga0501044_0006511_9704_10681 278
214 3300053133 Ga0500655_004817 Ga0500655_004817_1442_2317 278
215 3300053139 Ga0500568_0001033 Ga0500568_0001033_9795_10652 278
216 3300005985 Ga0081539_10015852 Ga0081539_100158525 279
217 3300032126 Ga0307415_100311793 Ga0307415_1003117932 279
218 3300045976 Ga0466967_0130291 Ga0466967_0130291_416_1288 279
219 3300053116 Ga0500592_000427 Ga0500592_000427_5146_5991 279
220 3300053156 Ga0500622_0002692 Ga0500622_0002692_11414_12271 279
221 3300053727 Ga0500611_037457 Ga0500611_037457_96_941 279
222 3300013100 Ga0157373_10001370 Ga0157373_100013707 280
223 3300046530 Ga0495654_0010360 Ga0495654_0010360_3146_4012 280
224 3300046616 Ga0495668_0002162 Ga0495668_0002162_3142_4008 280
225 3300046794 Ga0495589_0021219 Ga0495589_0021219_309_1175 280
226 3300049571 Ga0501034_0066768 Ga0501034_0066768_2177_3061 280
227 3300049572 Ga0501036_0011349 Ga0501036_0011349_6369_7253 280
228 3300049574 Ga0501038_0029604 Ga0501038_0029604_468_1352 280
229 3300049575 Ga0501039_0061136 Ga0501039_0061136_1760_2644 280
230 3300049822 Ga0501035_0017899 Ga0501035_0017899_3834_4718 280
231 3300049823 Ga0501044_0005291 Ga0501044_0005291_12823_13707 280
232 3300053139 Ga0500568_0029055 Ga0500568_0029055_869_1723 280
233 3300053158 Ga0500627_0000578 Ga0500627_0000578_1065_1931 280
234 2162886006 SwRhRL3b_contig_3956261 SwRhRL3b_0368.00000970 283
235 3300005295 Ga0065707_10000450 Ga0065707_1000045022 283
236 3300014326 Ga0157380_10000740 Ga0157380_100007402 283

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10118

Metal_hydrol

Predicted metal-dependent hydrolase

54

303

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uwz-assembly1.cif.gz_A protein 12 with aldehyde deformylating oxygenase activity from gloeobacter violaceus 0.6604 33 273
5uwz-assembly1.cif.gz_A protein 12 with aldehyde deformylating oxygenase activity from gloeobacter violaceus 0.6481 33 273
1rtw-assembly1.cif.gz_D x-ray structure of pf1337, a tena homologue from pyrococcus furiosus. northeast structural genomics research consortium (nesg) target pfr34 0.6001 44 222
5k53-assembly1.cif.gz_A crystal structures of aldehyde deformylating oxygenase from oscillatoria sp. knua011 0.5985 33 274
5k53-assembly1.cif.gz_A crystal structures of aldehyde deformylating oxygenase from oscillatoria sp. knua011 0.5894 33 274
ID Description Score Start End Superfamily
af_O33319_78_337_1.20.910.10 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8674 16 264 1.20.910.10
af_O33319_78_337_1.20.910.10 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8293 16 264 1.20.910.10
af_Q9W3W4_54_201_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.6685 43 179 1.20.1260.10
af_P41735_52_233_3.15.10.10 Alpha Beta;Super Roll;Bactericidal permeability-increasing protein; domain 1;Bactericidal permeability-increasing protein; domain 1 0.6548 41 215 3.15.10.10
af_Q54VB3_38_194_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.6405 38 179 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A0G3XJR5-F1-model_v4 FF domain-containing protein 0.9842 18 274
AF-A0A7W9BSI7-F1-model_v4 Metal-dependent hydrolase 0.9837 9 275
AF-A0A519NQW4-F1-model_v4 Metal-dependent hydrolase 0.9779 9 272 GO:0016787
AF-A0A6I6LG60-F1-model_v4 Metal-dependent hydrolase 0.9759 15 274 GO:0016787
AF-A0A3S2V9M7-F1-model_v4 Metal-dependent hydrolase 0.9757 15 275 GO:0016787

Feature Viewer

pLDDT pTM Quality
88.85 0.87 High
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Predicted Structure (AlphaFold2)

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